Rh7AG139100

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
11178794 .. 11182865
4072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG139100.1

Sequence Viewer

Length: 1272 bp
ATGTCCGCTTATGAAAGGTCGCGGATACTATTACGATTTGCTGATTTGGTTGAGAAACACAGTGAAGAGCTTTCAGCTCTTGAGACTTGGAACAATGGCAAGCCTTTTGAGCAGGCTGCCCATGCCGAATTGCCAATGTTGGCTCGTTTGTTTCGCTACTATGCTGGATGGGCAGACAAAATCCATGGGCTAACTGTTCCAGCGGATGGACCTTATCATGTGCAAACGCTGCATGAACCAATCGGTGTTGCAGGACAGATTATTCCATGGAACTTTCCTCTGCTCATGTTTGCGTGGAAAGTTGGGCCTGCACTGGCTTGTGGTAATACTATTGTCCTAAAAACTGCAGAGCAGACGCCTCTCACTGCCCTCTATGTGGCAAAGCTATTCCAAGAGGCTGGTCTTCCTCCTGGTGTTCTAAATATAGTTTCAGGTTATGGGCCGACTGCTGGTGCTGCTCTTGCCAGTCATATGGATGTGGACAAGGTAGCTTTCACCGGATCAACTGACACTGGTAAGATTATTCTTGAACTGGCTGCAAAAAGCAATCTTAAGCCAGTAACATTAGAGCTCGGAGGGAAATCACCTTTCATAATATGCGAGGATGCTGACATTGATCAGGCCGTAGAGCTTGCACACTTTGCTCTCTTCTTTAATCAGGGGCAATGCTGCTGTGCTGGGTCTCGTACTTTTGTACATGAGCGTGTATATGATGAGTTTTTGGAAAAAGCTAAGGCTCGTGCTTTGAAACGTATCGTTGGTGATCCCTTCAAGAAGGGTGTCGAACAAGGTCCCCAGATTGACTCGGAGCAGTTTCAGAAGGTTCTTAGATACATAAAATCTGGCATTGAAAGCACTGCTACCCTTGAATGTGGAGGTGAAAGATTTGGCTCCAAGGGCTACTTCATCCAGCCTACTGTATTCTCAAATGTCCAGGATGACATGTTGATAGCACAAGATGAGATCTTTGGCCCAGTGCAATCAATTCTGAAATTCAAGGAGCTTGATGAAGTAGTACGAAGAGCTAATACAACACGCTATGGTCTTGCTGCTGGGGTTTTCACCAGGAACATCGACACTGCCAATACATTGACACGGGCGTTGAGGGCTGGAACAGTGTGGGTGAATTGCTTCGATGTGTTTGATGCTGCGATTCCTTTTGGCGGCTACAAGATGAGTGGGATAGGTAGAGAAAAGGGAATCTACAGTCTTCATAACTATTTGCAGGTCAAGGCTGTTGTTACTCCTTTGAAGAATCCCGCATGGTTGTAA

Protein Analysis

423

Amino Acids

46.48

Weight (kDa)

6.52

Isoelectric Point (pI)

31.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 1 - 413 4.4e-165 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011731)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1216
AccB7I CCANNNNNTGG 1 cut(s) 206
AccII CGCG 1 cut(s) 22
AciI CCGC 5 cut(s) 6, 22, 203, 1164, 1260
AclWI GGATC 2 cut(s) 508, 758
AcsI RAATTY 1 cut(s) 992
AcyI GRCGYC 1 cut(s) 356
AfaI GTAC 3 cut(s) 688, 696, 1017
AfiI CCNNNNNNNGG 4 cut(s) 206, 376, 449, 1163
AflII CTTAAG 1 cut(s) 551
AflIII ACRYGT 1 cut(s) 942
AgsI TTSAA 7 cut(s) 530, 748, 772, 851, 869, 997, 1252
AjnI CCWGG 3 cut(s) 409, 933, 1064
AjuI GAANNNNNNNTTGG 2 cut(s) 887, 919
AluBI AGCT 9 cut(s) 70, 77, 385, 491, 571, 631, 731, 1003, 1025
AluI AGCT 9 cut(s) 70, 77, 385, 491, 571, 631, 731, 1003, 1025
Alw21I GWGCWC 1 cut(s) 573
Alw26I GTCTC 2 cut(s) 77, 687
AlwI GGATC 2 cut(s) 508, 758
AoxI GGCC 4 cut(s) 305, 440, 621, 970
ApeKI GCWGC 7 cut(s) 116, 229, 455, 536, 669, 1049, 1148
ApoI RAATTY 1 cut(s) 992
Asp700I GAANNNNTTC 1 cut(s) 1130
AspS9I GGNCC 5 cut(s) 209, 305, 440, 791, 971
AsuHPI GGTGA 6 cut(s) 487, 576, 773, 890, 1054, 1135
AvaII GGWCC 2 cut(s) 209, 791
BanII GRGCYC 1 cut(s) 573
BarI GAAGNNNNNNTAC 2 cut(s) 1012, 1044
BauI CACGAG 1 cut(s) 738
BbsI GAAGAC 2 cut(s) 395, 1202
Bbv12I GWGCWC 1 cut(s) 573
BbvI GCAGC 7 cut(s) 103, 216, 442, 523, 656, 1036, 1135
BccI CCATC 2 cut(s) 162, 200
BceAI ACGGC 1 cut(s) 608
BciT130I CCWGG 3 cut(s) 411, 935, 1066
BciVI GTATCC 1 cut(s) 18
BclI TGATCA 1 cut(s) 616
BcoDI GTCTC 2 cut(s) 77, 687
BfmI CTRYAG 2 cut(s) 345, 1204
BfrI CTTAAG 1 cut(s) 551
BfuAI ACCTGC 1 cut(s) 1216
BfuI GTATCC 1 cut(s) 18
BglII AGATCT 1 cut(s) 963
BisI GCNGC 8 cut(s) 117, 230, 456, 537, 670, 1050, 1149, 1165
BlsI GCNGC 8 cut(s) 118, 231, 457, 538, 671, 1051, 1150, 1166
Bme1390I CCNGG 3 cut(s) 411, 935, 1066
Bme18I GGWCC 2 cut(s) 209, 791
BmgT120I GGNCC 5 cut(s) 209, 305, 440, 791, 971
BmiI GGNNCC 2 cut(s) 793, 892
BmrFI CCNGG 3 cut(s) 411, 935, 1066
BmrI ACTGGG 1 cut(s) 968
BmsI GCATC 2 cut(s) 595, 1135
BmuI ACTGGG 1 cut(s) 968
BpiI GAAGAC 2 cut(s) 395, 1202
Bpu10I CCTNAGC 1 cut(s) 732
BpuEI CTTGAG 1 cut(s) 101
BsaHI GRCGYC 1 cut(s) 356
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 3 cut(s) 184, 266, 894
BsaWI WCCGGW 1 cut(s) 497
Bsc4I CCNNNNNNNGG 4 cut(s) 206, 376, 449, 1163
Bse1I ACTGG 6 cut(s) 318, 465, 517, 537, 557, 974
Bse3DI GCAATG 1 cut(s) 671
BseBI CCWGG 3 cut(s) 411, 935, 1066
BseDI CCNNGG 3 cut(s) 184, 266, 894
BseGI GGATG 6 cut(s) 173, 211, 481, 610, 906, 943
BseLI CCNNNNNNNGG 4 cut(s) 206, 376, 449, 1163
BseMI GCAATG 1 cut(s) 671
BseNI ACTGG 6 cut(s) 318, 465, 517, 537, 557, 974
BseXI GCAGC 7 cut(s) 103, 216, 442, 523, 656, 1036, 1135
BseYI CCCAGC 2 cut(s) 677, 1052
BsgI GTGCAG 1 cut(s) 294
Bsh1236I CGCG 1 cut(s) 22
BshFI GGCC 4 cut(s) 307, 442, 623, 972
BsiHKAI GWGCWC 1 cut(s) 573
BsiSI CCGG 1 cut(s) 498
BslFI GGGAC 1 cut(s) 777
BslI CCNNNNNNNGG 4 cut(s) 206, 376, 449, 1163
BsmAI GTCTC 2 cut(s) 77, 687
BsmFI GGGAC 1 cut(s) 777
BsnI GGCC 4 cut(s) 307, 442, 623, 972
Bso31I GGTCTC 1 cut(s) 687
Bsp1286I GDGCHC 1 cut(s) 573
Bsp1407I TGTACA 1 cut(s) 694
Bsp143I GATC 4 cut(s) 500, 616, 763, 963
Bsp19I CCATGG 2 cut(s) 184, 266
BspACI CCGC 5 cut(s) 6, 22, 203, 1164, 1260
BspANI GGCC 4 cut(s) 307, 442, 623, 972
BspFNI CGCG 1 cut(s) 22
BspLI GGNNCC 2 cut(s) 793, 892
BspMAI CTGCAG 1 cut(s) 349
BspMI ACCTGC 1 cut(s) 1216
BspPI GGATC 2 cut(s) 508, 758
BspQI GCTCTTC 2 cut(s) 60, 1015
BspTI CTTAAG 1 cut(s) 551
BspTNI GGTCTC 1 cut(s) 687
BsrDI GCAATG 1 cut(s) 671
BsrGI TGTACA 1 cut(s) 694
BsrI ACTGG 6 cut(s) 318, 465, 517, 537, 557, 974
BssECI CCNNGG 3 cut(s) 184, 266, 894
BssMI GATC 4 cut(s) 500, 616, 763, 963
BssNI GRCGYC 1 cut(s) 356
BssSI CACGAG 1 cut(s) 738
BssT1I CCWWGG 3 cut(s) 184, 266, 894
Bst2BI CACGAG 1 cut(s) 738
Bst2UI CCWGG 3 cut(s) 411, 935, 1066
Bst4CI ACNGT 5 cut(s) 62, 196, 919, 1117, 1208
Bst6I CTCTTC 3 cut(s) 60, 653, 1015
BstACI GRCGYC 1 cut(s) 356
BstAFI CTTAAG 1 cut(s) 551
BstAPI GCANNNNNTGC 2 cut(s) 229, 641
BstAUI TGTACA 1 cut(s) 694
BstC8I GCNNGC 4 cut(s) 101, 114, 309, 633
BstDEI CTNAG 2 cut(s) 732, 827
BstDSI CCRYGG 2 cut(s) 184, 266
BstF5I GGATG 6 cut(s) 173, 211, 481, 610, 906, 943
BstFNI CGCG 1 cut(s) 22
BstKTI GATC 4 cut(s) 503, 619, 766, 966
BstMAI GTCTC 2 cut(s) 77, 687
BstMBI GATC 4 cut(s) 500, 616, 763, 963
BstNI CCWGG 3 cut(s) 411, 935, 1066
BstNSI RCATGY 1 cut(s) 946
BstSCI CCNGG 3 cut(s) 409, 933, 1064
BstSFI CTRYAG 2 cut(s) 345, 1204
BstUI CGCG 1 cut(s) 22
BstV1I GCAGC 7 cut(s) 103, 216, 442, 523, 656, 1036, 1135
BstV2I GAAGAC 2 cut(s) 395, 1202
BstX2I RGATCY 1 cut(s) 963
BstXI CCANNNNNNTGG 2 cut(s) 398, 472
BstYI RGATCY 1 cut(s) 963
BsuI GTATCC 1 cut(s) 18
BsuRI GGCC 4 cut(s) 307, 442, 623, 972
BtgI CCRYGG 2 cut(s) 184, 266
BtsCI GGATG 6 cut(s) 173, 211, 481, 610, 906, 943
BtsI GCAGTG 3 cut(s) 363, 855, 1077
BtsIMutI CAGTG 8 cut(s) 67, 311, 363, 510, 855, 981, 1077, 1122
BveI ACCTGC 1 cut(s) 1216
Cac8I GCNNGC 4 cut(s) 101, 114, 309, 633
Cfr13I GGNCC 5 cut(s) 209, 305, 440, 791, 971
CseI GACGC 1 cut(s) 364
Csp6I GTAC 3 cut(s) 687, 695, 1016
CspCI CAANNNNNGTGG 2 cut(s) 1159, 1194
CviAII CATG 9 cut(s) 122, 185, 218, 233, 267, 286, 698, 943, 1263
CviQI GTAC 3 cut(s) 687, 695, 1016
DdeI CTNAG 2 cut(s) 732, 827
DpnI GATC 4 cut(s) 502, 618, 765, 965
DpnII GATC 4 cut(s) 500, 616, 763, 963
Eam1104I CTCTTC 3 cut(s) 60, 653, 1015
EarI CTCTTC 3 cut(s) 60, 653, 1015
Ecl136II GAGCTC 1 cut(s) 571
Eco130I CCWWGG 3 cut(s) 184, 266, 894
Eco24I GRGCYC 1 cut(s) 573
Eco31I GGTCTC 1 cut(s) 687
Eco47I GGWCC 2 cut(s) 209, 791
Eco53kI GAGCTC 1 cut(s) 571
EcoICRI GAGCTC 1 cut(s) 571
EcoO109I RGGNCCY 1 cut(s) 791
EcoRII CCWGG 3 cut(s) 409, 933, 1064
EcoT14I CCWWGG 3 cut(s) 184, 266, 894
EcoT38I GRGCYC 1 cut(s) 573
ErhI CCWWGG 3 cut(s) 184, 266, 894
FaeI CATG 9 cut(s) 125, 188, 221, 236, 270, 289, 701, 946, 1266
FalI AAGNNNNNCTT 2 cut(s) 887, 919
FaqI GGGAC 1 cut(s) 777
FatI CATG 9 cut(s) 121, 184, 217, 232, 266, 285, 697, 942, 1262
FauI CCCGC 1 cut(s) 1267
FauNDI CATATG 1 cut(s) 471
FbaI TGATCA 1 cut(s) 616
Fnu4HI GCNGC 8 cut(s) 117, 230, 456, 537, 670, 1050, 1149, 1165
FokI GGATG 6 cut(s) 180, 218, 488, 617, 893, 950
FriOI GRGCYC 1 cut(s) 573
Fsp4HI GCNGC 8 cut(s) 117, 230, 456, 537, 670, 1050, 1149, 1165
GluI GCNGC 8 cut(s) 117, 230, 456, 537, 670, 1050, 1149, 1165
GsaI CCCAGC 2 cut(s) 681, 1056
HaeIII GGCC 4 cut(s) 307, 442, 623, 972
HapII CCGG 1 cut(s) 498
HgaI GACGC 1 cut(s) 364
Hin1I GRCGYC 1 cut(s) 356
Hin1II CATG 9 cut(s) 125, 188, 221, 236, 270, 289, 701, 946, 1266
HinfI GANTC 4 cut(s) 803, 1153, 1200, 1255
HpaII CCGG 1 cut(s) 498
HphI GGTGA 6 cut(s) 487, 576, 773, 890, 1054, 1135
Hpy166II GTNNAC 1 cut(s) 481
Hpy188I TCNGA 4 cut(s) 575, 808, 819, 990
Hpy188III TCNNGA 3 cut(s) 80, 527, 772
Hpy8I GTNNAC 1 cut(s) 481
HpyAV CCTTC 3 cut(s) 769, 778, 814
HpyCH4III ACNGT 5 cut(s) 62, 196, 919, 1117, 1208
HpyCH4IV ACGT 1 cut(s) 751
HpyCH4V TGCA 9 cut(s) 223, 232, 251, 311, 347, 539, 635, 979, 1225
HpyF3I CTNAG 2 cut(s) 732, 827
HpySE526I ACGT 1 cut(s) 751
Hsp92I GRCGYC 1 cut(s) 356
Hsp92II CATG 9 cut(s) 125, 188, 221, 236, 270, 289, 701, 946, 1266
Ksp22I TGATCA 1 cut(s) 616
Kzo9I GATC 4 cut(s) 500, 616, 763, 963
LguI GCTCTTC 2 cut(s) 60, 1015
LmnI GCTCC 3 cut(s) 808, 896, 1000
Lsp1109I GCAGC 7 cut(s) 103, 216, 442, 523, 656, 1036, 1135
LweI GCATC 2 cut(s) 595, 1135
MaeII ACGT 1 cut(s) 751
MaeIII GTNAC 2 cut(s) 559, 1240
MalI GATC 4 cut(s) 502, 618, 765, 965
MboI GATC 4 cut(s) 500, 616, 763, 963
MboII GAAGA 6 cut(s) 77, 395, 640, 1032, 1202, 1264
MflI RGATCY 1 cut(s) 963
MhlI GDGCHC 1 cut(s) 573
MluCI AATT 4 cut(s) 128, 984, 992, 1126
MlyI GAGTC 1 cut(s) 797
MnlI CCTC 9 cut(s) 288, 369, 380, 388, 417, 569, 595, 869, 1098
MroXI GAANNNNTTC 1 cut(s) 1130
MseI TTAA 2 cut(s) 552, 654
MslI CAYNNNNRTG 2 cut(s) 474, 702
MspA1I CMGCKG 1 cut(s) 203
MspCI CTTAAG 1 cut(s) 551
MspI CCGG 1 cut(s) 498
MspR9I CCNGG 3 cut(s) 411, 935, 1066
MvaI CCWGG 3 cut(s) 411, 935, 1066
MvnI CGCG 1 cut(s) 22
NcoI CCATGG 2 cut(s) 184, 266
NdeI CATATG 1 cut(s) 471
NdeII GATC 4 cut(s) 500, 616, 763, 963
NlaIII CATG 9 cut(s) 125, 188, 221, 236, 270, 289, 701, 946, 1266
NlaIV GGNNCC 2 cut(s) 793, 892
NspI RCATGY 1 cut(s) 946
PciI ACATGT 1 cut(s) 942
PciSI GCTCTTC 2 cut(s) 60, 1015
PdmI GAANNNNTTC 1 cut(s) 1130
PfeI GAWTC 3 cut(s) 1153, 1200, 1255
PflMI CCANNNNNTGG 1 cut(s) 206
PfoI TCCNGGA 1 cut(s) 933
PkrI GCNGC 8 cut(s) 118, 231, 457, 538, 671, 1051, 1150, 1166
PleI GAGTC 1 cut(s) 797
PpsI GAGTC 1 cut(s) 797
PpuMI RGGWCCY 1 cut(s) 791
PscI ACATGT 1 cut(s) 942
Psp124BI GAGCTC 1 cut(s) 573
Psp5II RGGWCCY 1 cut(s) 791
Psp6I CCWGG 3 cut(s) 409, 933, 1064
PspFI CCCAGC 2 cut(s) 677, 1052
PspGI CCWGG 3 cut(s) 409, 933, 1064
PspN4I GGNNCC 2 cut(s) 793, 892
PspPI GGNCC 5 cut(s) 209, 305, 440, 791, 971
PspPPI RGGWCCY 1 cut(s) 791
PstI CTGCAG 1 cut(s) 349
PsuI RGATCY 1 cut(s) 963
RsaI GTAC 3 cut(s) 688, 696, 1017
RsaNI GTAC 3 cut(s) 687, 695, 1016
RseI CAYNNNNRTG 2 cut(s) 474, 702
SacI GAGCTC 1 cut(s) 573
SapI GCTCTTC 2 cut(s) 60, 1015
SaqAI TTAA 2 cut(s) 552, 654
SatI GCNGC 8 cut(s) 117, 230, 456, 537, 670, 1050, 1149, 1165
Sau3AI GATC 4 cut(s) 500, 616, 763, 963
Sau96I GGNCC 5 cut(s) 209, 305, 440, 791, 971
SchI GAGTC 1 cut(s) 797
ScrFI CCNGG 3 cut(s) 411, 935, 1066
SduI GDGCHC 1 cut(s) 573
SfaNI GCATC 2 cut(s) 595, 1135
SfcI CTRYAG 2 cut(s) 345, 1204
SinI GGWCC 2 cut(s) 209, 791
SmiMI CAYNNNNRTG 2 cut(s) 474, 702
SmlI CTYRAG 2 cut(s) 80, 551
SmoI CTYRAG 2 cut(s) 80, 551
Sse9I AATT 4 cut(s) 128, 984, 992, 1126
SsiI CCGC 5 cut(s) 6, 22, 203, 1164, 1260
SstI GAGCTC 1 cut(s) 573
StyD4I CCNGG 3 cut(s) 409, 933, 1064
StyI CCWWGG 3 cut(s) 184, 266, 894
TaaI ACNGT 5 cut(s) 62, 196, 919, 1117, 1208
TaiI ACGT 1 cut(s) 754
TaqI TCGA 3 cut(s) 783, 1074, 1134
TasI AATT 4 cut(s) 128, 984, 992, 1126
TatI WGTACW 1 cut(s) 694
TauI GCSGC 1 cut(s) 1167
TfiI GAWTC 3 cut(s) 1153, 1200, 1255
Tru1I TTAA 2 cut(s) 552, 654
Tru9I TTAA 2 cut(s) 552, 654
TscAI CASTG 8 cut(s) 67, 318, 370, 517, 862, 981, 1084, 1122
TseI GCWGC 7 cut(s) 116, 229, 455, 536, 669, 1049, 1148
TspDTI ATGAA 6 cut(s) 27, 249, 580, 895, 1023, 1202
TspRI CASTG 8 cut(s) 67, 318, 370, 517, 862, 981, 1084, 1122
Van91I CCANNNNNTGG 1 cut(s) 206
Vha464I CTTAAG 1 cut(s) 551
VpaK11BI GGWCC 2 cut(s) 209, 791
XapI RAATTY 1 cut(s) 992
XceI RCATGY 1 cut(s) 946
XmnI GAANNNNTTC 1 cut(s) 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.