Rh7AG306300

Regulatory subunit of pyrophosphate--fructose 6- phosphate 1-phosphotransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
34254593 .. 34259756
5164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG306300.1

Sequence Viewer

Length: 1566 bp
ATGGATTCCGACTACGGCATTCCCCGAGAGCTCTCCGACGTCCAGAAGCTCCGATCTCAATACCAGCCGGAGCTTCCTCCTTGCCTCCAGGGAACTACTGTAAGAGTTGAATTTGGGGACACAACAACAGCTGCAGACCCCACAGATGCCAATACCATTGCTCGATACTTCCCACACACTTATGGTCAGCCTTTGGCTCACTTTCTCAGGGCAACTGCAAAAGTTGCTGGTGCTCAGGTTATTACTGAGCATCCAGCTATGAGGGTTGGAATTGTCTTTTGTGGGAGACAATCTCCTGGAGGACACAATGTCATCTGGGGCCTTCTCAAGGCTCTCAAAATTCATAACCCCAAAAGTACCTTAATTGGGTTTTTGGGTGGTTCTGAAGGTTTATTTGCACAAAAAACTCTTGAGATAACAGATGATGTTCTTGCCACCTACAAAAATCAAGGTGGTTATGATTTGCTTGGACGGACAAGGGATCAAATTAGAACAAAGGAGCAAGTCAACGCTACTTTAACTGCATGCAATGCTATGAAGTTGGATGGCCTTGTCATAATTGGAGGGGTGACATCAAACACTGATGCCGCCCAGCTTGCAGAGACATTCGCTGAAGCAAAATGCCAGACAAAGGTGGTTGGGGTTCCTGTCACTATGAACGGAGACCTTAAGAACCAGTTTGTGGAAGCTAATGTTGGTTTTGATACAGTGTGCAAGGTCAATTCCCAGCTCATCAGCAATATGTGCACAGATGCTCTTTCTGCTGAAAAGTATTATTATTTCATTCGACTTATGGGCCGGAAGGCATCACATGTTGCCTTGGAGTGCACCCTTCAATCTCATCCAAACTTGGTAATTCTTGGTGAGGAGGTGGCTGCATCCAAGCTAACACTTTTTGACATTACAACCCGAATCTGTGATGCAATCCAAGATCGTGCCACACAAGAGAAGAATCATGGTGTCATCCTATTACCGGAAGGACTCATAGAAAGCATTCCTGAAGTGTATGCCCTCTTGAAGGAAATTCATGGTTTGTATAGGCAAGGAGTTTCTGCCGATAAGATTTCTTCTCAACTCTCACCGTGGGCTTCTGCTCTGTTTGAATTTTTGCCACATTTTATCAAGAAACAGCTGCTTCTTTTGCCTGAATCAGATGACTCTGCACAGTTATCTCAGATTGAGACAGAGAAACTTTTTGCACATCTTGTGGAGGTCGAGATGAACAAGCGCCAGAAAGAAGGCACATACAAGGGGAAGAAGTTTAATGCTATCTGCCACTTTTTCGGTTATCAGGCTCGGGGGTCTTTACCATCAAAATTCGATTGTGACTATGCCTATGTTCTAGGGCACATCTGCTACCACATTCTTGCTGCTGGTTTGAATGGTTACATGGCAACTATAACTAACCTGAAAAATCCATTGAACAAGTGGCGTTGTGGTGCTGCTCCACTTACGGCAATGATGACTGTGAAGCGCTGGTCTCAAAATCCTGGGTCTACTGCATCTATTGGAAAACCTGGCATTTTTCCAGCTACCGTAGATTTGAAAGGCAAAGCATATGAGTAA

Protein Analysis

521

Amino Acids

57.17

Weight (kDa)

7.9

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 88 - 399 1e-27 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013431)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 42
AccB7I CCANNNNNTGG 1 cut(s) 682
AccI GTMKAC 1 cut(s) 1496
AciI CCGC 1 cut(s) 588
AclWI GGATC 1 cut(s) 489
AcsI RAATTY 5 cut(s) 110, 339, 1023, 1103, 1316
AcuI CTGAAG 3 cut(s) 405, 633, 1020
AcyI GRCGYC 1 cut(s) 39
AfaI GTAC 1 cut(s) 358
AfeI AGCGCT 1 cut(s) 1475
AfiI CCNNNNNNNGG 6 cut(s) 328, 366, 631, 682, 973, 1018
AflII CTTAAG 1 cut(s) 668
AflIII ACRYGT 1 cut(s) 811
AgsI TTSAA 7 cut(s) 110, 836, 1018, 1103, 1381, 1423, 1546
AhdI GACNNNNNGTC 1 cut(s) 308
AjnI CCWGG 4 cut(s) 87, 295, 1489, 1516
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
Alw21I GWGCWC 4 cut(s) 33, 235, 749, 830
Alw26I GTCTC 5 cut(s) 280, 596, 657, 1175, 1485
Alw44I GTGCAC 2 cut(s) 745, 826
AlwI GGATC 1 cut(s) 489
Ama87I CYCGRG 2 cut(s) 24, 1296
Aor51HI AGCGCT 1 cut(s) 1475
AoxI GGCC 3 cut(s) 319, 547, 796
ApaLI GTGCAC 2 cut(s) 745, 826
ApeKI GCWGC 5 cut(s) 131, 875, 1132, 1370, 1442
ApoI RAATTY 5 cut(s) 110, 339, 1023, 1103, 1316
Asp700I GAANNNNTTC 1 cut(s) 993
AspLEI GCGC 2 cut(s) 1230, 1476
AspS9I GGNCC 2 cut(s) 319, 796
AsuHPI GGTGA 3 cut(s) 580, 875, 1071
AvaI CYCGRG 2 cut(s) 24, 1296
BaeGI GKGCMC 3 cut(s) 749, 830, 1350
BanII GRGCYC 1 cut(s) 33
Bbv12I GWGCWC 4 cut(s) 33, 235, 749, 830
BbvI GCAGC 5 cut(s) 118, 862, 1119, 1357, 1429
BccI CCATC 2 cut(s) 539, 1318
BceAI ACGGC 2 cut(s) 31, 1470
BciT130I CCWGG 4 cut(s) 89, 297, 1491, 1518
BcoDI GTCTC 5 cut(s) 280, 596, 657, 1175, 1485
BfaI CTAG 1 cut(s) 1343
BfmI CTRYAG 1 cut(s) 132
BfoI RGCGCY 2 cut(s) 1231, 1477
BfrI CTTAAG 1 cut(s) 668
BisI GCNGC 6 cut(s) 132, 588, 876, 1133, 1371, 1443
BlsI GCNGC 6 cut(s) 133, 589, 877, 1134, 1372, 1444
Bme1390I CCNGG 4 cut(s) 89, 297, 1491, 1518
BmeRI GACNNNNNGTC 1 cut(s) 308
BmeT110I CYCGRG 2 cut(s) 24, 1296
BmgT120I GGNCC 2 cut(s) 319, 796
BmiI GGNNCC 2 cut(s) 320, 645
BmrFI CCNGG 4 cut(s) 89, 297, 1491, 1518
BmsI GCATC 8 cut(s) 136, 259, 574, 742, 815, 887, 910, 1511
BplI GAGNNNNNCTC 2 cut(s) 277, 309
BpmI CTGGAG 2 cut(s) 71, 318
Bpu10I CCTNAGC 1 cut(s) 234
BpuEI CTTGAG 2 cut(s) 311, 431
BsaHI GRCGYC 1 cut(s) 39
BsaI GGTCTC 2 cut(s) 657, 1485
BsaJI CCNNGG 4 cut(s) 88, 819, 1082, 1490
BsaWI WCCGGW 1 cut(s) 973
Bsc4I CCNNNNNNNGG 6 cut(s) 328, 366, 631, 682, 973, 1018
Bse1I ACTGG 1 cut(s) 676
Bse3DI GCAATG 3 cut(s) 156, 535, 1464
BseBI CCWGG 4 cut(s) 89, 297, 1491, 1518
BseDI CCNNGG 4 cut(s) 88, 819, 1082, 1490
BseGI GGATG 5 cut(s) 250, 550, 841, 878, 963
BseLI CCNNNNNNNGG 6 cut(s) 328, 366, 631, 682, 973, 1018
BseMI GCAATG 3 cut(s) 156, 535, 1464
BseMII CTCAG 4 cut(s) 220, 237, 248, 1187
BseNI ACTGG 1 cut(s) 676
BseRI GAGGAG 1 cut(s) 881
BseSI GKGCMC 3 cut(s) 749, 830, 1350
BseXI GCAGC 5 cut(s) 118, 862, 1119, 1357, 1429
BseYI CCCAGC 2 cut(s) 591, 726
BsgI GTGCAG 1 cut(s) 1146
BshFI GGCC 3 cut(s) 321, 549, 798
BsiHKAI GWGCWC 4 cut(s) 33, 235, 749, 830
BsiHKCI CYCGRG 2 cut(s) 24, 1296
BsiSI CCGG 3 cut(s) 68, 799, 974
BslFI GGGAC 1 cut(s) 131
BslI CCNNNNNNNGG 6 cut(s) 328, 366, 631, 682, 973, 1018
BsmAI GTCTC 5 cut(s) 280, 596, 657, 1175, 1485
BsmFI GGGAC 1 cut(s) 131
BsmI GAATGC 2 cut(s) 18, 993
BsnI GGCC 3 cut(s) 321, 549, 798
Bso31I GGTCTC 2 cut(s) 657, 1485
BsoBI CYCGRG 2 cut(s) 24, 1296
Bsp1286I GDGCHC 5 cut(s) 33, 235, 749, 830, 1350
Bsp143I GATC 3 cut(s) 53, 481, 931
BspACI CCGC 1 cut(s) 588
BspANI GGCC 3 cut(s) 321, 549, 798
BspCNI CTCAG 4 cut(s) 219, 238, 247, 1186
BspLI GGNNCC 2 cut(s) 320, 645
BspMAI CTGCAG 1 cut(s) 136
BspPI GGATC 1 cut(s) 489
BspTI CTTAAG 1 cut(s) 668
BspTNI GGTCTC 2 cut(s) 657, 1485
BsrDI GCAATG 3 cut(s) 156, 535, 1464
BsrI ACTGG 1 cut(s) 676
BssECI CCNNGG 4 cut(s) 88, 819, 1082, 1490
BssMI GATC 3 cut(s) 53, 481, 931
BssNI GRCGYC 1 cut(s) 39
BssT1I CCWWGG 1 cut(s) 819
Bst2UI CCWGG 4 cut(s) 89, 297, 1491, 1518
Bst4CI ACNGT 6 cut(s) 100, 709, 1083, 1167, 1468, 1537
BstACI GRCGYC 1 cut(s) 39
BstAFI CTTAAG 1 cut(s) 668
BstAPI GCANNNNNTGC 3 cut(s) 224, 530, 744
BstC8I GCNNGC 2 cut(s) 526, 597
BstDEI CTNAG 4 cut(s) 206, 234, 246, 1173
BstDSI CCRYGG 1 cut(s) 1082
BstENI CCTNNNNNAGG 2 cut(s) 326, 1016
BstF5I GGATG 5 cut(s) 250, 550, 841, 878, 963
BstH2I RGCGCY 2 cut(s) 1231, 1477
BstHHI GCGC 2 cut(s) 1230, 1476
BstKTI GATC 3 cut(s) 56, 484, 934
BstMAI GTCTC 5 cut(s) 280, 596, 657, 1175, 1485
BstMBI GATC 3 cut(s) 53, 481, 931
BstMWI GCNNNNNNNGC 6 cut(s) 224, 530, 596, 744, 761, 1141
BstNI CCWGG 4 cut(s) 89, 297, 1491, 1518
BstNSI RCATGY 2 cut(s) 528, 815
BstSCI CCNGG 4 cut(s) 87, 295, 1489, 1516
BstSFI CTRYAG 1 cut(s) 132
BstSLI GKGCMC 3 cut(s) 749, 830, 1350
BstV1I GCAGC 5 cut(s) 118, 862, 1119, 1357, 1429
BsuRI GGCC 3 cut(s) 321, 549, 798
BtgI CCRYGG 1 cut(s) 1082
BtsCI GGATG 5 cut(s) 250, 550, 841, 878, 963
BtsIMutI CAGTG 2 cut(s) 579, 714
Cac8I GCNNGC 2 cut(s) 526, 597
CfoI GCGC 2 cut(s) 1230, 1476
Cfr13I GGNCC 2 cut(s) 319, 796
Csp6I GTAC 1 cut(s) 357
CviAII CATG 5 cut(s) 525, 812, 956, 1028, 1390
CviQI GTAC 1 cut(s) 357
DdeI CTNAG 4 cut(s) 206, 234, 246, 1173
DpnI GATC 3 cut(s) 55, 483, 933
DpnII GATC 3 cut(s) 53, 481, 931
DriI GACNNNNNGTC 1 cut(s) 308
Eam1105I GACNNNNNGTC 1 cut(s) 308
Ecl136II GAGCTC 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 819
Eco24I GRGCYC 1 cut(s) 33
Eco31I GGTCTC 2 cut(s) 657, 1485
Eco47III AGCGCT 1 cut(s) 1475
Eco53kI GAGCTC 1 cut(s) 31
Eco57I CTGAAG 3 cut(s) 405, 633, 1020
Eco88I CYCGRG 2 cut(s) 24, 1296
EcoICRI GAGCTC 1 cut(s) 31
EcoNI CCTNNNNNAGG 2 cut(s) 326, 1016
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 4 cut(s) 87, 295, 1489, 1516
EcoT14I CCWWGG 1 cut(s) 819
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 819
FaeI CATG 5 cut(s) 528, 815, 959, 1031, 1393
FaqI GGGAC 1 cut(s) 131
FatI CATG 5 cut(s) 524, 811, 955, 1027, 1389
FauNDI CATATG 1 cut(s) 1558
FblI GTMKAC 1 cut(s) 1496
Fnu4HI GCNGC 6 cut(s) 132, 588, 876, 1133, 1371, 1443
FokI GGATG 5 cut(s) 237, 557, 828, 865, 950
FriOI GRGCYC 1 cut(s) 33
Fsp4HI GCNGC 6 cut(s) 132, 588, 876, 1133, 1371, 1443
FspBI CTAG 1 cut(s) 1343
GlaI GCGC 2 cut(s) 1229, 1475
GluI GCNGC 6 cut(s) 132, 588, 876, 1133, 1371, 1443
GsaI CCCAGC 2 cut(s) 595, 730
GsuI CTGGAG 2 cut(s) 71, 318
HaeII RGCGCY 2 cut(s) 1231, 1477
HaeIII GGCC 3 cut(s) 321, 549, 798
HapII CCGG 3 cut(s) 68, 799, 974
HhaI GCGC 2 cut(s) 1230, 1476
Hin1I GRCGYC 1 cut(s) 39
Hin1II CATG 5 cut(s) 528, 815, 959, 1031, 1393
Hin6I GCGC 2 cut(s) 1228, 1474
HinP1I GCGC 2 cut(s) 1228, 1474
HincII GTYRAC 1 cut(s) 508
HindII GTYRAC 1 cut(s) 508
HinfI GANTC 6 cut(s) 5, 912, 952, 981, 1148, 1157
HpaII CCGG 3 cut(s) 68, 799, 974
HphI GGTGA 3 cut(s) 580, 875, 1071
Hpy166II GTNNAC 4 cut(s) 508, 747, 828, 1497
Hpy188I TCNGA 6 cut(s) 10, 37, 53, 385, 1153, 1176
Hpy188III TCNNGA 6 cut(s) 43, 410, 998, 1015, 1123, 1216
Hpy8I GTNNAC 4 cut(s) 508, 747, 828, 1497
Hpy99I CGWCG 1 cut(s) 41
HpyAV CCTTC 7 cut(s) 332, 380, 796, 842, 971, 1012, 1232
HpyCH4III ACNGT 6 cut(s) 100, 709, 1083, 1167, 1468, 1537
HpyCH4IV ACGT 1 cut(s) 39
HpyF10VI GCNNNNNNNGC 6 cut(s) 224, 530, 596, 744, 761, 1141
HpyF3I CTNAG 4 cut(s) 206, 234, 246, 1173
HpySE526I ACGT 1 cut(s) 39
Hsp92I GRCGYC 1 cut(s) 39
Hsp92II CATG 5 cut(s) 528, 815, 959, 1031, 1393
HspAI GCGC 2 cut(s) 1228, 1474
Kzo9I GATC 3 cut(s) 53, 481, 931
LmnI GCTCC 4 cut(s) 54, 70, 499, 1450
Lsp1109I GCAGC 5 cut(s) 118, 862, 1119, 1357, 1429
LweI GCATC 8 cut(s) 136, 259, 574, 742, 815, 887, 910, 1511
MaeI CTAG 1 cut(s) 1343
MaeII ACGT 1 cut(s) 39
MaeIII GTNAC 4 cut(s) 568, 649, 1325, 1385
MalI GATC 3 cut(s) 55, 483, 933
MboI GATC 3 cut(s) 53, 481, 931
MboII GAAGA 3 cut(s) 961, 1059, 1267
MhlI GDGCHC 5 cut(s) 33, 235, 749, 830, 1350
MlyI GAGTC 2 cut(s) 975, 1151
MmeI TCCRAC 4 cut(s) 33, 60, 247, 522
MnlI CCTC 9 cut(s) 87, 95, 255, 293, 557, 859, 862, 1022, 1204
MroXI GAANNNNTTC 1 cut(s) 993
MseI TTAA 4 cut(s) 362, 518, 669, 1263
MslI CAYNNNNRTG 1 cut(s) 180
MspA1I CMGCKG 2 cut(s) 131, 1132
MspCI CTTAAG 1 cut(s) 668
MspI CCGG 3 cut(s) 68, 799, 974
MspR9I CCNGG 4 cut(s) 89, 297, 1491, 1518
Mva1269I GAATGC 2 cut(s) 18, 993
MvaI CCWGG 4 cut(s) 89, 297, 1491, 1518
MwoI GCNNNNNNNGC 6 cut(s) 224, 530, 596, 744, 761, 1141
NdeI CATATG 1 cut(s) 1558
NdeII GATC 3 cut(s) 53, 481, 931
NlaIII CATG 5 cut(s) 528, 815, 959, 1031, 1393
NlaIV GGNNCC 2 cut(s) 320, 645
NmuCI GTSAC 3 cut(s) 568, 649, 1325
NspI RCATGY 2 cut(s) 528, 815
PaeI GCATGC 1 cut(s) 528
PciI ACATGT 1 cut(s) 811
PctI GAATGC 2 cut(s) 18, 993
PdmI GAANNNNTTC 1 cut(s) 993
PfeI GAWTC 4 cut(s) 5, 912, 952, 1148
PflMI CCANNNNNTGG 1 cut(s) 682
PfoI TCCNGGA 1 cut(s) 295
PkrI GCNGC 6 cut(s) 133, 589, 877, 1134, 1372, 1444
PleI GAGTC 2 cut(s) 975, 1151
PpsI GAGTC 2 cut(s) 975, 1151
PscI ACATGT 1 cut(s) 811
Psp124BI GAGCTC 1 cut(s) 33
Psp6I CCWGG 4 cut(s) 87, 295, 1489, 1516
PspFI CCCAGC 2 cut(s) 591, 726
PspGI CCWGG 4 cut(s) 87, 295, 1489, 1516
PspN4I GGNNCC 2 cut(s) 320, 645
PspPI GGNCC 2 cut(s) 319, 796
PstI CTGCAG 1 cut(s) 136
PvuII CAGCTG 2 cut(s) 131, 1132
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
RseI CAYNNNNRTG 1 cut(s) 180
SacI GAGCTC 1 cut(s) 33
SaqAI TTAA 4 cut(s) 362, 518, 669, 1263
SatI GCNGC 6 cut(s) 132, 588, 876, 1133, 1371, 1443
Sau3AI GATC 3 cut(s) 53, 481, 931
Sau96I GGNCC 2 cut(s) 319, 796
SchI GAGTC 2 cut(s) 975, 1151
ScrFI CCNGG 4 cut(s) 89, 297, 1491, 1518
SduI GDGCHC 5 cut(s) 33, 235, 749, 830, 1350
SfaNI GCATC 8 cut(s) 136, 259, 574, 742, 815, 887, 910, 1511
SfcI CTRYAG 1 cut(s) 132
SmiMI CAYNNNNRTG 1 cut(s) 180
SmlI CTYRAG 3 cut(s) 326, 410, 668
SmoI CTYRAG 3 cut(s) 326, 410, 668
SphI GCATGC 1 cut(s) 528
SsiI CCGC 1 cut(s) 588
SspMI CTAG 1 cut(s) 1343
SstI GAGCTC 1 cut(s) 33
StyD4I CCNGG 4 cut(s) 87, 295, 1489, 1516
StyI CCWWGG 1 cut(s) 819
TaaI ACNGT 6 cut(s) 100, 709, 1083, 1167, 1468, 1537
TaiI ACGT 1 cut(s) 42
TaqI TCGA 4 cut(s) 163, 787, 1215, 1320
TauI GCSGC 1 cut(s) 590
TfiI GAWTC 4 cut(s) 5, 912, 952, 1148
Tru1I TTAA 4 cut(s) 362, 518, 669, 1263
Tru9I TTAA 4 cut(s) 362, 518, 669, 1263
TscAI CASTG 2 cut(s) 586, 714
TseFI GTSAC 3 cut(s) 568, 649, 1325
TseI GCWGC 5 cut(s) 131, 875, 1132, 1370, 1442
Tsp45I GTSAC 3 cut(s) 568, 649, 1325
TspDTI ATGAA 6 cut(s) 332, 551, 671, 772, 1016, 1235
TspGWI ACGGA 2 cut(s) 487, 675
TspRI CASTG 2 cut(s) 586, 714
Van91I CCANNNNNTGG 1 cut(s) 682
Vha464I CTTAAG 1 cut(s) 668
VneI GTGCAC 2 cut(s) 745, 826
XagI CCTNNNNNAGG 2 cut(s) 326, 1016
XapI RAATTY 5 cut(s) 110, 339, 1023, 1103, 1316
XceI RCATGY 2 cut(s) 528, 815
XcmI CCANNNNNNNNNTGG 1 cut(s) 1425
XmiI GTMKAC 1 cut(s) 1496
XmnI GAANNNNTTC 1 cut(s) 993
XspI CTAG 1 cut(s) 1343
ZraI GACGTC 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.