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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0005776.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00225370 |
| rosa_rugosa | Rorug06G0064200 Rorug07G0297500 |
| rosa_samantha | Rh7AG293600 Rh7AG451900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 18 |
| AclI | AACGTT | 1 cut(s) | 60 |
| AclWI | GGATC | 1 cut(s) | 199 |
| AgsI | TTSAA | 1 cut(s) | 206 |
| AhlI | ACTAGT | 1 cut(s) | 32 |
| AluBI | AGCT | 3 cut(s) | 167, 248, 269 |
| AluI | AGCT | 3 cut(s) | 167, 248, 269 |
| Alw26I | GTCTC | 1 cut(s) | 108 |
| AlwI | GGATC | 1 cut(s) | 199 |
| AoxI | GGCC | 3 cut(s) | 108, 221, 240 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 60 |
| AspS9I | GGNCC | 1 cut(s) | 241 |
| AxyI | CCTNAGG | 1 cut(s) | 315 |
| BbsI | GAAGAC | 1 cut(s) | 12 |
| BccI | CCATC | 3 cut(s) | 110, 203, 266 |
| BcoDI | GTCTC | 1 cut(s) | 108 |
| BcuI | ACTAGT | 1 cut(s) | 32 |
| BfaI | CTAG | 3 cut(s) | 14, 33, 245 |
| BfmI | CTRYAG | 1 cut(s) | 231 |
| BfuAI | ACCTGC | 1 cut(s) | 18 |
| BmgT120I | GGNCC | 1 cut(s) | 241 |
| BpiI | GAAGAC | 1 cut(s) | 12 |
| Bsa29I | ATCGAT | 1 cut(s) | 194 |
| BsaJI | CCNNGG | 1 cut(s) | 141 |
| Bse1I | ACTGG | 1 cut(s) | 224 |
| Bse21I | CCTNAGG | 1 cut(s) | 315 |
| Bse3DI | GCAATG | 1 cut(s) | 353 |
| BseCI | ATCGAT | 1 cut(s) | 194 |
| BseDI | CCNNGG | 1 cut(s) | 141 |
| BseGI | GGATG | 1 cut(s) | 95 |
| BseMI | GCAATG | 1 cut(s) | 353 |
| BseMII | CTCAG | 2 cut(s) | 216, 306 |
| BseNI | ACTGG | 1 cut(s) | 224 |
| BshFI | GGCC | 3 cut(s) | 110, 223, 242 |
| BshVI | ATCGAT | 1 cut(s) | 194 |
| BsiSI | CCGG | 1 cut(s) | 107 |
| BsmAI | GTCTC | 1 cut(s) | 108 |
| BsnI | GGCC | 3 cut(s) | 110, 223, 242 |
| Bsp143I | GATC | 2 cut(s) | 191, 300 |
| BspANI | GGCC | 3 cut(s) | 110, 223, 242 |
| BspCNI | CTCAG | 2 cut(s) | 217, 307 |
| BspDI | ATCGAT | 1 cut(s) | 194 |
| BspMI | ACCTGC | 1 cut(s) | 18 |
| BspPI | GGATC | 1 cut(s) | 199 |
| BsrDI | GCAATG | 1 cut(s) | 353 |
| BsrI | ACTGG | 1 cut(s) | 224 |
| BssECI | CCNNGG | 1 cut(s) | 141 |
| BssMI | GATC | 2 cut(s) | 191, 300 |
| BssT1I | CCWWGG | 1 cut(s) | 141 |
| BstDEI | CTNAG | 2 cut(s) | 225, 315 |
| BstF5I | GGATG | 1 cut(s) | 95 |
| BstKTI | GATC | 2 cut(s) | 194, 303 |
| BstMAI | GTCTC | 1 cut(s) | 108 |
| BstMBI | GATC | 2 cut(s) | 191, 300 |
| BstSFI | CTRYAG | 1 cut(s) | 231 |
| BstV2I | GAAGAC | 1 cut(s) | 12 |
| Bsu15I | ATCGAT | 1 cut(s) | 194 |
| Bsu36I | CCTNAGG | 1 cut(s) | 315 |
| BsuRI | GGCC | 3 cut(s) | 110, 223, 242 |
| BsuTUI | ATCGAT | 1 cut(s) | 194 |
| BtsCI | GGATG | 1 cut(s) | 95 |
| BtsI | GCAGTG | 1 cut(s) | 163 |
| BtsIMutI | CAGTG | 1 cut(s) | 163 |
| BveI | ACCTGC | 1 cut(s) | 18 |
| Cfr13I | GGNCC | 1 cut(s) | 241 |
| ClaI | ATCGAT | 1 cut(s) | 194 |
| CviAII | CATG | 1 cut(s) | 100 |
| CviJI | RGCY | 7 cut(s) | 110, 167, 201, 223, 242, 248, 269 |
| CviKI_1 | RGCY | 7 cut(s) | 110, 167, 201, 223, 242, 248, 269 |
| DdeI | CTNAG | 2 cut(s) | 225, 315 |
| DpnI | GATC | 2 cut(s) | 193, 302 |
| DpnII | GATC | 2 cut(s) | 191, 300 |
| Eco130I | CCWWGG | 1 cut(s) | 141 |
| Eco81I | CCTNAGG | 1 cut(s) | 315 |
| EcoO109I | RGGNCCY | 1 cut(s) | 241 |
| EcoT14I | CCWWGG | 1 cut(s) | 141 |
| ErhI | CCWWGG | 1 cut(s) | 141 |
| FaeI | CATG | 1 cut(s) | 103 |
| FaiI | YATR | 7 cut(s) | 41, 101, 114, 128, 133, 217, 233 |
| FatI | CATG | 1 cut(s) | 99 |
| FokI | GGATG | 1 cut(s) | 82 |
| FspBI | CTAG | 3 cut(s) | 14, 33, 245 |
| HaeIII | GGCC | 3 cut(s) | 110, 223, 242 |
| HapII | CCGG | 1 cut(s) | 107 |
| Hin1II | CATG | 1 cut(s) | 103 |
| HinfI | GANTC | 3 cut(s) | 161, 227, 296 |
| HpaII | CCGG | 1 cut(s) | 107 |
| Hpy188I | TCNGA | 1 cut(s) | 286 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 314 |
| HpyAV | CCTTC | 2 cut(s) | 86, 232 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyCH4V | TGCA | 3 cut(s) | 156, 215, 346 |
| HpyF3I | CTNAG | 2 cut(s) | 225, 315 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92II | CATG | 1 cut(s) | 103 |
| Kzo9I | GATC | 2 cut(s) | 191, 300 |
| LpnPI | CCDG | 5 cut(s) | 23, 120, 205, 237, 327 |
| MaeI | CTAG | 3 cut(s) | 14, 33, 245 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MalI | GATC | 2 cut(s) | 193, 302 |
| MboI | GATC | 2 cut(s) | 191, 300 |
| MboII | GAAGA | 3 cut(s) | 17, 65, 71 |
| MluCI | AATT | 1 cut(s) | 148 |
| MlyI | GAGTC | 2 cut(s) | 236, 305 |
| MmeI | TCCRAC | 1 cut(s) | 273 |
| MnlI | CCTC | 2 cut(s) | 182, 310 |
| MroXI | GAANNNNTTC | 1 cut(s) | 60 |
| MseI | TTAA | 1 cut(s) | 21 |
| MslI | CAYNNNNRTG | 1 cut(s) | 125 |
| MspA1I | CMGCKG | 1 cut(s) | 167 |
| MspI | CCGG | 1 cut(s) | 107 |
| NdeII | GATC | 2 cut(s) | 191, 300 |
| NlaIII | CATG | 1 cut(s) | 103 |
| PdmI | GAANNNNTTC | 1 cut(s) | 60 |
| PfeI | GAWTC | 1 cut(s) | 161 |
| PleI | GAGTC | 2 cut(s) | 235, 304 |
| PpsI | GAGTC | 2 cut(s) | 235, 304 |
| Psp1406I | AACGTT | 1 cut(s) | 60 |
| PspPI | GGNCC | 1 cut(s) | 241 |
| PvuII | CAGCTG | 1 cut(s) | 167 |
| RseI | CAYNNNNRTG | 1 cut(s) | 125 |
| SaqAI | TTAA | 1 cut(s) | 21 |
| Sau3AI | GATC | 2 cut(s) | 191, 300 |
| Sau96I | GGNCC | 1 cut(s) | 241 |
| SchI | GAGTC | 2 cut(s) | 236, 305 |
| SetI | ASST | 5 cut(s) | 12, 63, 169, 250, 271 |
| SfcI | CTRYAG | 1 cut(s) | 231 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 125 |
| SpeI | ACTAGT | 1 cut(s) | 32 |
| Sse9I | AATT | 1 cut(s) | 148 |
| SspMI | CTAG | 3 cut(s) | 14, 33, 245 |
| StyI | CCWWGG | 1 cut(s) | 141 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 2 cut(s) | 194, 299 |
| TasI | AATT | 1 cut(s) | 148 |
| TfiI | GAWTC | 1 cut(s) | 161 |
| Tru1I | TTAA | 1 cut(s) | 21 |
| Tru9I | TTAA | 1 cut(s) | 21 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| TspRI | CASTG | 1 cut(s) | 163 |
| XmnI | GAANNNNTTC | 1 cut(s) | 60 |
| XspI | CTAG | 3 cut(s) | 14, 33, 245 |