Rh7AG482200

exocyst complex component

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
67740097 .. 67748793
8697 bp
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UTR
Exon/CDS
Intron
Rh7AG482200.1

Sequence Viewer

Length: 333 bp
ATGGCATGGTTTAAGTTGGGTTTCTTAACTTATCTTTTACTCTCATGGATATCAGATTATGATTGGCAATTGTTTTTTCTGTTCGAGTTTTACGATGATCAACTATTGGCCTTCATGGTCCTAATTCTTGTCTGGTTGAGTGAACTATTTACCCTGGTGGGAATACTGAAACGTGTTCTTGAAGAGGTTGAGAAAGTGATGCATGAGTTTAAAGGCACTGTATACAAGTCTATGGAAGATCCACAGATAGATCTAACCAATGTGAATACAGAAGAACAAATGGGATATAAGTATGGCGAGGCTTGCTTTCGTTTATGTACCATTTACACCTAA

Protein Analysis

110

Amino Acids

13.23

Weight (kDa)

4.43

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020431)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 222
AclWI GGATC 1 cut(s) 233
AfaI GTAC 1 cut(s) 319
AflIII ACRYGT 1 cut(s) 172
AgsI TTSAA 1 cut(s) 182
AjnI CCWGG 1 cut(s) 153
AlwI GGATC 1 cut(s) 233
AoxI GGCC 1 cut(s) 108
AspS9I GGNCC 1 cut(s) 118
AvaII GGWCC 1 cut(s) 118
BciT130I CCWGG 1 cut(s) 155
BclI TGATCA 1 cut(s) 97
BglII AGATCT 1 cut(s) 250
Bme1390I CCNGG 1 cut(s) 155
Bme18I GGWCC 1 cut(s) 118
BmgT120I GGNCC 1 cut(s) 118
BmrFI CCNGG 1 cut(s) 155
BmsI GCATC 1 cut(s) 189
BsaJI CCNNGG 1 cut(s) 153
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 1 cut(s) 153
BshFI GGCC 1 cut(s) 110
BsnI GGCC 1 cut(s) 110
Bsp143I GATC 3 cut(s) 97, 238, 250
BspANI GGCC 1 cut(s) 110
BspPI GGATC 1 cut(s) 233
BssECI CCNNGG 1 cut(s) 153
BssMI GATC 3 cut(s) 97, 238, 250
BssNAI GTATAC 1 cut(s) 223
Bst1107I GTATAC 1 cut(s) 223
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 1 cut(s) 220
Bst6I CTCTTC 1 cut(s) 177
BstC8I GCNNGC 1 cut(s) 304
BstKTI GATC 3 cut(s) 100, 241, 253
BstMBI GATC 3 cut(s) 97, 238, 250
BstMWI GCNNNNNNNGC 1 cut(s) 303
BstNI CCWGG 1 cut(s) 155
BstSCI CCNGG 1 cut(s) 153
BstX2I RGATCY 2 cut(s) 238, 250
BstYI RGATCY 2 cut(s) 238, 250
BstZ17I GTATAC 1 cut(s) 223
BsuRI GGCC 1 cut(s) 110
BtsIMutI CAGTG 1 cut(s) 216
Cac8I GCNNGC 1 cut(s) 304
Cfr13I GGNCC 1 cut(s) 118
Csp6I GTAC 1 cut(s) 318
CviAII CATG 4 cut(s) 6, 45, 115, 203
CviJI RGCY 2 cut(s) 110, 302
CviKI_1 RGCY 2 cut(s) 110, 302
CviQI GTAC 1 cut(s) 318
DpnI GATC 3 cut(s) 99, 240, 252
DpnII GATC 3 cut(s) 97, 238, 250
DraI TTTAAA 1 cut(s) 211
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
Eco32I GATATC 1 cut(s) 51
Eco47I GGWCC 1 cut(s) 118
EcoRII CCWGG 1 cut(s) 153
EcoRV GATATC 1 cut(s) 51
EcoT22I ATGCAT 1 cut(s) 204
FaeI CATG 4 cut(s) 9, 48, 118, 206
FatI CATG 4 cut(s) 5, 44, 114, 202
FbaI TGATCA 1 cut(s) 97
FblI GTMKAC 1 cut(s) 222
HaeIII GGCC 1 cut(s) 110
Hin1II CATG 4 cut(s) 9, 48, 118, 206
Hpy166II GTNNAC 2 cut(s) 143, 223
Hpy188I TCNGA 1 cut(s) 55
Hpy188III TCNNGA 1 cut(s) 179
Hpy8I GTNNAC 2 cut(s) 143, 223
HpyAV CCTTC 1 cut(s) 121
HpyCH4III ACNGT 1 cut(s) 220
HpyCH4IV ACGT 1 cut(s) 172
HpyCH4V TGCA 1 cut(s) 202
HpyF10VI GCNNNNNNNGC 1 cut(s) 303
HpySE526I ACGT 1 cut(s) 172
Hsp92II CATG 4 cut(s) 9, 48, 118, 206
Ksp22I TGATCA 1 cut(s) 97
Kzo9I GATC 3 cut(s) 97, 238, 250
LpnPI CCDG 3 cut(s) 118, 140, 167
LweI GCATC 1 cut(s) 189
MaeII ACGT 1 cut(s) 172
MalI GATC 3 cut(s) 99, 240, 252
MboI GATC 3 cut(s) 97, 238, 250
MboII GAAGA 3 cut(s) 194, 248, 284
MfeI CAATTG 1 cut(s) 68
MflI RGATCY 2 cut(s) 238, 250
MluCI AATT 2 cut(s) 68, 123
MnlI CCTC 2 cut(s) 178, 292
Mph1103I ATGCAT 1 cut(s) 204
MseI TTAA 3 cut(s) 12, 26, 210
MspR9I CCNGG 1 cut(s) 155
MunI CAATTG 1 cut(s) 68
MvaI CCWGG 1 cut(s) 155
MwoI GCNNNNNNNGC 1 cut(s) 303
NdeII GATC 3 cut(s) 97, 238, 250
NlaIII CATG 4 cut(s) 9, 48, 118, 206
NsiI ATGCAT 1 cut(s) 204
PcsI WCGNNNNNNNCGW 1 cut(s) 90
Psp6I CCWGG 1 cut(s) 153
PspGI CCWGG 1 cut(s) 153
PspPI GGNCC 1 cut(s) 118
PsuI RGATCY 2 cut(s) 238, 250
RsaI GTAC 1 cut(s) 319
RsaNI GTAC 1 cut(s) 318
SaqAI TTAA 3 cut(s) 12, 26, 210
Sau3AI GATC 3 cut(s) 97, 238, 250
Sau96I GGNCC 1 cut(s) 118
ScrFI CCNGG 1 cut(s) 155
SetI ASST 3 cut(s) 175, 189, 332
SfaNI GCATC 1 cut(s) 189
SinI GGWCC 1 cut(s) 118
Sse9I AATT 2 cut(s) 68, 123
StyD4I CCNGG 1 cut(s) 153
TaaI ACNGT 1 cut(s) 220
TaiI ACGT 1 cut(s) 175
TaqI TCGA 1 cut(s) 84
TasI AATT 2 cut(s) 68, 123
Tru1I TTAA 3 cut(s) 12, 26, 210
Tru9I TTAA 3 cut(s) 12, 26, 210
TscAI CASTG 1 cut(s) 223
TspDTI ATGAA 1 cut(s) 103
TspRI CASTG 1 cut(s) 223
VpaK11BI GGWCC 1 cut(s) 118
XmiI GTMKAC 1 cut(s) 222
Zsp2I ATGCAT 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.