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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g06391 |
| malus_domestica | MD14G1170500.v1.1 |
| prunus_persica | Prupe.5G164600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0192411 |
| rosa_laevigata | RLG00000004370 |
| rosa_multiflora | Rmu_sc0003108.1_g000023 |
| rosa_roxburghii | Rroxscaffold_3G00263030 |
| rosa_rugosa | Rorug07G0001500 |
| rosa_samantha | Rh7AG125200 Rh7BG127500 Rh7CG129200 Rh7DG129300 |
| rosa_wichuraiana | Rw7G010780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 180 |
| Acc36I | ACCTGC | 2 cut(s) | 82, 1493 |
| AccB1I | GGYRCC | 1 cut(s) | 152 |
| AccBSI | CCGCTC | 2 cut(s) | 466, 510 |
| AccI | GTMKAC | 1 cut(s) | 905 |
| AccII | CGCG | 4 cut(s) | 724, 739, 748, 1911 |
| AclWI | GGATC | 8 cut(s) | 79, 692, 755, 781, 794, 935, 1085, 1423 |
| AcsI | RAATTY | 5 cut(s) | 691, 1035, 1525, 1762, 1780 |
| AfaI | GTAC | 7 cut(s) | 262, 624, 672, 1083, 1105, 1111, 1717 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 418, 442, 888, 1608, 1910 |
| AflIII | ACRYGT | 1 cut(s) | 1723 |
| AgsI | TTSAA | 3 cut(s) | 1366, 1531, 1878 |
| AhlI | ACTAGT | 2 cut(s) | 248, 269 |
| AjnI | CCWGG | 2 cut(s) | 417, 730 |
| AluBI | AGCT | 6 cut(s) | 162, 383, 504, 847, 968, 1898 |
| AluI | AGCT | 6 cut(s) | 162, 383, 504, 847, 968, 1898 |
| Alw21I | GWGCWC | 1 cut(s) | 1427 |
| Alw26I | GTCTC | 6 cut(s) | 161, 186, 453, 1554, 1641, 1695 |
| Alw44I | GTGCAC | 1 cut(s) | 1423 |
| AlwI | GGATC | 8 cut(s) | 79, 692, 755, 781, 794, 935, 1085, 1423 |
| Ama87I | CYCGRG | 1 cut(s) | 412 |
| AoxI | GGCC | 6 cut(s) | 35, 415, 734, 879, 953, 1294 |
| ApaLI | GTGCAC | 1 cut(s) | 1423 |
| ApoI | RAATTY | 5 cut(s) | 691, 1035, 1525, 1762, 1780 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1922 |
| AspLEI | GCGC | 3 cut(s) | 336, 568, 726 |
| AspS9I | GGNCC | 6 cut(s) | 118, 415, 734, 807, 880, 891 |
| AsuC2I | CCSGG | 2 cut(s) | 413, 414 |
| AsuHPI | GGTGA | 4 cut(s) | 360, 384, 762, 1851 |
| AvaI | CYCGRG | 1 cut(s) | 412 |
| AvaII | GGWCC | 3 cut(s) | 118, 807, 891 |
| AxyI | CCTNAGG | 1 cut(s) | 957 |
| BaeGI | GKGCMC | 1 cut(s) | 1427 |
| BamHI | GGATCC | 1 cut(s) | 786 |
| BanI | GGYRCC | 1 cut(s) | 152 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 355, 387 |
| BbsI | GAAGAC | 2 cut(s) | 219, 533 |
| Bbv12I | GWGCWC | 1 cut(s) | 1427 |
| BccI | CCATC | 3 cut(s) | 1046, 1606, 1706 |
| BceAI | ACGGC | 2 cut(s) | 75, 1420 |
| BciT130I | CCWGG | 2 cut(s) | 419, 732 |
| BcnI | CCSGG | 2 cut(s) | 413, 414 |
| BcoDI | GTCTC | 6 cut(s) | 161, 186, 453, 1554, 1641, 1695 |
| BcuI | ACTAGT | 2 cut(s) | 248, 269 |
| BfmI | CTRYAG | 3 cut(s) | 78, 384, 615 |
| BfuAI | ACCTGC | 2 cut(s) | 82, 1493 |
| BmcAI | AGTACT | 1 cut(s) | 262 |
| Bme1390I | CCNGG | 4 cut(s) | 413, 414, 419, 732 |
| Bme18I | GGWCC | 3 cut(s) | 118, 807, 891 |
| BmeT110I | CYCGRG | 1 cut(s) | 412 |
| BmgT120I | GGNCC | 6 cut(s) | 118, 415, 734, 807, 880, 891 |
| BmiI | GGNNCC | 4 cut(s) | 154, 752, 788, 1224 |
| BmrFI | CCNGG | 4 cut(s) | 413, 414, 419, 732 |
| BmrI | ACTGGG | 1 cut(s) | 1365 |
| BmsI | GCATC | 5 cut(s) | 416, 952, 1444, 1544, 1804 |
| BmuI | ACTGGG | 1 cut(s) | 1365 |
| BpiI | GAAGAC | 2 cut(s) | 219, 533 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 450, 482 |
| BpuEI | CTTGAG | 8 cut(s) | 294, 526, 632, 651, 693, 954, 1469, 1682 |
| BpuMI | CCSGG | 2 cut(s) | 413, 414 |
| BsaI | GGTCTC | 3 cut(s) | 161, 186, 453 |
| BsaJI | CCNNGG | 6 cut(s) | 395, 411, 412, 731, 1068, 1909 |
| BsaWI | WCCGGW | 3 cut(s) | 188, 885, 1608 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 247, 277, 1864, 1894 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 418, 442, 888, 1608, 1910 |
| Bse1I | ACTGG | 4 cut(s) | 258, 944, 1360, 1862 |
| Bse21I | CCTNAGG | 1 cut(s) | 957 |
| Bse3DI | GCAATG | 1 cut(s) | 1714 |
| BseBI | CCWGG | 2 cut(s) | 419, 732 |
| BseDI | CCNNGG | 6 cut(s) | 395, 411, 412, 731, 1068, 1909 |
| BseGI | GGATG | 7 cut(s) | 407, 967, 1057, 1257, 1368, 1598, 1785 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 418, 442, 888, 1608, 1910 |
| BseMI | GCAATG | 1 cut(s) | 1714 |
| BseMII | CTCAG | 4 cut(s) | 156, 1385, 1433, 1809 |
| BseNI | ACTGG | 4 cut(s) | 258, 944, 1360, 1862 |
| BseRI | GAGGAG | 1 cut(s) | 1002 |
| BseSI | GKGCMC | 1 cut(s) | 1427 |
| BseYI | CCCAGC | 1 cut(s) | 674 |
| BsgI | GTGCAG | 1 cut(s) | 1229 |
| Bsh1236I | CGCG | 4 cut(s) | 724, 739, 748, 1911 |
| BshFI | GGCC | 6 cut(s) | 37, 417, 736, 881, 955, 1296 |
| BshNI | GGYRCC | 1 cut(s) | 152 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1427 |
| BsiHKCI | CYCGRG | 1 cut(s) | 412 |
| BsiSI | CCGG | 6 cut(s) | 189, 413, 547, 805, 886, 1609 |
| BslFI | GGGAC | 2 cut(s) | 779, 1887 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 418, 442, 888, 1608, 1910 |
| BsmAI | GTCTC | 6 cut(s) | 161, 186, 453, 1554, 1641, 1695 |
| BsmBI | CGTCTC | 1 cut(s) | 1554 |
| BsmFI | GGGAC | 2 cut(s) | 779, 1887 |
| BsmI | GAATGC | 2 cut(s) | 1618, 1810 |
| BsnI | GGCC | 6 cut(s) | 37, 417, 736, 881, 955, 1296 |
| Bso31I | GGTCTC | 3 cut(s) | 161, 186, 453 |
| BsoBI | CYCGRG | 1 cut(s) | 412 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1427 |
| BspANI | GGCC | 6 cut(s) | 37, 417, 736, 881, 955, 1296 |
| BspCNI | CTCAG | 4 cut(s) | 157, 1386, 1432, 1808 |
| BspFNI | CGCG | 4 cut(s) | 724, 739, 748, 1911 |
| BspHI | TCATGA | 2 cut(s) | 132, 1771 |
| BspLI | GGNNCC | 4 cut(s) | 154, 752, 788, 1224 |
| BspMAI | CTGCAG | 2 cut(s) | 82, 619 |
| BspMI | ACCTGC | 2 cut(s) | 82, 1493 |
| BspPI | GGATC | 8 cut(s) | 79, 692, 755, 781, 794, 935, 1085, 1423 |
| BspT107I | GGYRCC | 1 cut(s) | 152 |
| BspTNI | GGTCTC | 3 cut(s) | 161, 186, 453 |
| BsrBI | CCGCTC | 2 cut(s) | 466, 510 |
| BsrDI | GCAATG | 1 cut(s) | 1714 |
| BsrI | ACTGG | 4 cut(s) | 258, 944, 1360, 1862 |
| BssECI | CCNNGG | 6 cut(s) | 395, 411, 412, 731, 1068, 1909 |
| BssT1I | CCWWGG | 1 cut(s) | 1068 |
| Bst2UI | CCWGG | 2 cut(s) | 419, 732 |
| Bst4CI | ACNGT | 4 cut(s) | 157, 218, 1448, 1652 |
| Bst6I | CTCTTC | 4 cut(s) | 318, 445, 1235, 1625 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1826 |
| BstC8I | GCNNGC | 5 cut(s) | 588, 680, 779, 1500, 1595 |
| BstDEI | CTNAG | 5 cut(s) | 165, 957, 1394, 1419, 1795 |
| BstDSI | CCRYGG | 1 cut(s) | 1909 |
| BstF5I | GGATG | 7 cut(s) | 407, 967, 1057, 1257, 1368, 1598, 1785 |
| BstFNI | CGCG | 4 cut(s) | 724, 739, 748, 1911 |
| BstHHI | GCGC | 3 cut(s) | 336, 568, 726 |
| BstMAI | GTCTC | 6 cut(s) | 161, 186, 453, 1554, 1641, 1695 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 27, 159, 592, 745, 971, 1814, 1826 |
| BstNI | CCWGG | 2 cut(s) | 419, 732 |
| BstNSI | RCATGY | 1 cut(s) | 1727 |
| BstSCI | CCNGG | 4 cut(s) | 411, 412, 417, 730 |
| BstSFI | CTRYAG | 3 cut(s) | 78, 384, 615 |
| BstSLI | GKGCMC | 1 cut(s) | 1427 |
| BstUI | CGCG | 4 cut(s) | 724, 739, 748, 1911 |
| BstV2I | GAAGAC | 2 cut(s) | 219, 533 |
| BstX2I | RGATCY | 3 cut(s) | 84, 786, 1415 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 951 |
| BstYI | RGATCY | 3 cut(s) | 84, 786, 1415 |
| Bsu36I | CCTNAGG | 1 cut(s) | 957 |
| BsuRI | GGCC | 6 cut(s) | 37, 417, 736, 881, 955, 1296 |
| BtgI | CCRYGG | 1 cut(s) | 1909 |
| BtsCI | GGATG | 7 cut(s) | 407, 967, 1057, 1257, 1368, 1598, 1785 |
| BtsIMutI | CAGTG | 2 cut(s) | 951, 1427 |
| BveI | ACCTGC | 2 cut(s) | 82, 1493 |
| Cac8I | GCNNGC | 5 cut(s) | 588, 680, 779, 1500, 1595 |
| CciI | TCATGA | 2 cut(s) | 132, 1771 |
| CfoI | GCGC | 3 cut(s) | 336, 568, 726 |
| Cfr13I | GGNCC | 6 cut(s) | 118, 415, 734, 807, 880, 891 |
| Cfr42I | CCGCGG | 1 cut(s) | 1912 |
| Cfr9I | CCCGGG | 1 cut(s) | 412 |
| CseI | GACGC | 1 cut(s) | 1571 |
| Csp6I | GTAC | 7 cut(s) | 261, 623, 671, 1082, 1104, 1110, 1716 |
| CviAII | CATG | 7 cut(s) | 52, 133, 782, 1137, 1289, 1724, 1772 |
| CviQI | GTAC | 7 cut(s) | 261, 623, 671, 1082, 1104, 1110, 1716 |
| DdeI | CTNAG | 5 cut(s) | 165, 957, 1394, 1419, 1795 |
| Eam1104I | CTCTTC | 4 cut(s) | 318, 445, 1235, 1625 |
| EarI | CTCTTC | 4 cut(s) | 318, 445, 1235, 1625 |
| EciI | GGCGGA | 2 cut(s) | 77, 131 |
| Eco130I | CCWWGG | 1 cut(s) | 1068 |
| Eco147I | AGGCCT | 1 cut(s) | 37 |
| Eco31I | GGTCTC | 3 cut(s) | 161, 186, 453 |
| Eco47I | GGWCC | 3 cut(s) | 118, 807, 891 |
| Eco81I | CCTNAGG | 1 cut(s) | 957 |
| Eco88I | CYCGRG | 1 cut(s) | 412 |
| EcoRII | CCWGG | 2 cut(s) | 417, 730 |
| EcoT14I | CCWWGG | 1 cut(s) | 1068 |
| EcoT22I | ATGCAT | 1 cut(s) | 1138 |
| ErhI | CCWWGG | 1 cut(s) | 1068 |
| Esp3I | CGTCTC | 1 cut(s) | 1554 |
| FaeI | CATG | 7 cut(s) | 55, 136, 785, 1140, 1292, 1727, 1775 |
| FaqI | GGGAC | 2 cut(s) | 779, 1887 |
| FatI | CATG | 7 cut(s) | 51, 132, 781, 1136, 1288, 1723, 1771 |
| FauI | CCCGC | 4 cut(s) | 365, 471, 786, 809 |
| FblI | GTMKAC | 1 cut(s) | 905 |
| FokI | GGATG | 7 cut(s) | 394, 974, 1064, 1264, 1355, 1585, 1772 |
| GlaI | GCGC | 3 cut(s) | 335, 567, 725 |
| GsaI | CCCAGC | 1 cut(s) | 678 |
| HaeIII | GGCC | 6 cut(s) | 37, 417, 736, 881, 955, 1296 |
| HapII | CCGG | 6 cut(s) | 189, 413, 547, 805, 886, 1609 |
| HgaI | GACGC | 1 cut(s) | 1571 |
| HhaI | GCGC | 3 cut(s) | 336, 568, 726 |
| Hin1II | CATG | 7 cut(s) | 55, 136, 785, 1140, 1292, 1727, 1775 |
| Hin6I | GCGC | 3 cut(s) | 334, 566, 724 |
| HinP1I | GCGC | 3 cut(s) | 334, 566, 724 |
| HincII | GTYRAC | 2 cut(s) | 1195, 1544 |
| HindII | GTYRAC | 2 cut(s) | 1195, 1544 |
| HinfI | GANTC | 4 cut(s) | 12, 307, 1077, 1918 |
| HpaI | GTTAAC | 1 cut(s) | 1195 |
| HpaII | CCGG | 6 cut(s) | 189, 413, 547, 805, 886, 1609 |
| HphI | GGTGA | 4 cut(s) | 360, 384, 762, 1851 |
| Hpy166II | GTNNAC | 6 cut(s) | 95, 625, 906, 1195, 1425, 1544 |
| Hpy188I | TCNGA | 9 cut(s) | 166, 559, 697, 940, 1041, 1090, 1324, 1744, 1798 |
| Hpy188III | TCNNGA | 7 cut(s) | 133, 311, 919, 1393, 1486, 1661, 1772 |
| Hpy8I | GTNNAC | 6 cut(s) | 95, 625, 906, 1195, 1425, 1544 |
| Hpy99I | CGWCG | 1 cut(s) | 904 |
| HpyCH4III | ACNGT | 4 cut(s) | 157, 218, 1448, 1652 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 27, 159, 592, 745, 971, 1814, 1826 |
| HpyF3I | CTNAG | 5 cut(s) | 165, 957, 1394, 1419, 1795 |
| Hsp92II | CATG | 7 cut(s) | 55, 136, 785, 1140, 1292, 1727, 1775 |
| HspAI | GCGC | 3 cut(s) | 334, 566, 724 |
| KspAI | GTTAAC | 1 cut(s) | 1195 |
| KspI | CCGCGG | 1 cut(s) | 1912 |
| LweI | GCATC | 5 cut(s) | 416, 952, 1444, 1544, 1804 |
| MaeIII | GTNAC | 3 cut(s) | 362, 1303, 1375 |
| MbiI | CCGCTC | 2 cut(s) | 466, 510 |
| MboII | GAAGA | 8 cut(s) | 224, 335, 432, 538, 1252, 1463, 1612, 1918 |
| MfeI | CAATTG | 1 cut(s) | 1628 |
| MflI | RGATCY | 3 cut(s) | 84, 786, 1415 |
| MhlI | GDGCHC | 1 cut(s) | 1427 |
| MlyI | GAGTC | 1 cut(s) | 301 |
| MmeI | TCCRAC | 2 cut(s) | 537, 1393 |
| Mph1103I | ATGCAT | 1 cut(s) | 1138 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1922 |
| MseI | TTAA | 2 cut(s) | 1062, 1194 |
| MspA1I | CMGCKG | 3 cut(s) | 620, 929, 1911 |
| MspI | CCGG | 6 cut(s) | 189, 413, 547, 805, 886, 1609 |
| MspR9I | CCNGG | 4 cut(s) | 413, 414, 419, 732 |
| MunI | CAATTG | 1 cut(s) | 1628 |
| Mva1269I | GAATGC | 2 cut(s) | 1618, 1810 |
| MvaI | CCWGG | 2 cut(s) | 419, 732 |
| MvnI | CGCG | 4 cut(s) | 724, 739, 748, 1911 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 27, 159, 592, 745, 971, 1814, 1826 |
| NciI | CCSGG | 2 cut(s) | 413, 414 |
| NlaIII | CATG | 7 cut(s) | 55, 136, 785, 1140, 1292, 1727, 1775 |
| NlaIV | GGNNCC | 4 cut(s) | 154, 752, 788, 1224 |
| NmuCI | GTSAC | 1 cut(s) | 1303 |
| NsiI | ATGCAT | 1 cut(s) | 1138 |
| NspI | RCATGY | 1 cut(s) | 1727 |
| PagI | TCATGA | 2 cut(s) | 132, 1771 |
| PceI | AGGCCT | 1 cut(s) | 37 |
| PciI | ACATGT | 1 cut(s) | 1723 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1086 |
| PctI | GAATGC | 2 cut(s) | 1618, 1810 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1922 |
| PfeI | GAWTC | 3 cut(s) | 12, 1077, 1918 |
| PleI | GAGTC | 1 cut(s) | 301 |
| PpsI | GAGTC | 1 cut(s) | 301 |
| PscI | ACATGT | 1 cut(s) | 1723 |
| PsiI | TTATAA | 1 cut(s) | 180 |
| Psp6I | CCWGG | 2 cut(s) | 417, 730 |
| PspFI | CCCAGC | 1 cut(s) | 674 |
| PspGI | CCWGG | 2 cut(s) | 417, 730 |
| PspN4I | GGNNCC | 4 cut(s) | 154, 752, 788, 1224 |
| PspPI | GGNCC | 6 cut(s) | 118, 415, 734, 807, 880, 891 |
| PstI | CTGCAG | 2 cut(s) | 82, 619 |
| PsuI | RGATCY | 3 cut(s) | 84, 786, 1415 |
| RsaI | GTAC | 7 cut(s) | 262, 624, 672, 1083, 1105, 1111, 1717 |
| RsaNI | GTAC | 7 cut(s) | 261, 623, 671, 1082, 1104, 1110, 1716 |
| SacII | CCGCGG | 1 cut(s) | 1912 |
| SaqAI | TTAA | 2 cut(s) | 1062, 1194 |
| Sau96I | GGNCC | 6 cut(s) | 118, 415, 734, 807, 880, 891 |
| ScaI | AGTACT | 1 cut(s) | 262 |
| SchI | GAGTC | 1 cut(s) | 301 |
| ScrFI | CCNGG | 4 cut(s) | 413, 414, 419, 732 |
| SduI | GDGCHC | 1 cut(s) | 1427 |
| SfaNI | GCATC | 5 cut(s) | 416, 952, 1444, 1544, 1804 |
| SfcI | CTRYAG | 3 cut(s) | 78, 384, 615 |
| Sfr303I | CCGCGG | 1 cut(s) | 1912 |
| SgrBI | CCGCGG | 1 cut(s) | 1912 |
| SinI | GGWCC | 3 cut(s) | 118, 807, 891 |
| SmaI | CCCGGG | 1 cut(s) | 414 |
| SmlI | CTYRAG | 8 cut(s) | 309, 505, 647, 666, 708, 969, 1484, 1661 |
| SmoI | CTYRAG | 8 cut(s) | 309, 505, 647, 666, 708, 969, 1484, 1661 |
| SpeI | ACTAGT | 2 cut(s) | 248, 269 |
| SseBI | AGGCCT | 1 cut(s) | 37 |
| StuI | AGGCCT | 1 cut(s) | 37 |
| StyD4I | CCNGG | 4 cut(s) | 411, 412, 417, 730 |
| StyI | CCWWGG | 1 cut(s) | 1068 |
| TaaI | ACNGT | 4 cut(s) | 157, 218, 1448, 1652 |
| TaqI | TCGA | 3 cut(s) | 524, 918, 1623 |
| TatI | WGTACW | 3 cut(s) | 260, 1103, 1109 |
| TauI | GCSGC | 2 cut(s) | 739, 1895 |
| TfiI | GAWTC | 3 cut(s) | 12, 1077, 1918 |
| Tru1I | TTAA | 2 cut(s) | 1062, 1194 |
| Tru9I | TTAA | 2 cut(s) | 1062, 1194 |
| TscAI | CASTG | 2 cut(s) | 951, 1427 |
| TseFI | GTSAC | 1 cut(s) | 1303 |
| Tsp45I | GTSAC | 1 cut(s) | 1303 |
| TspDTI | ATGAA | 8 cut(s) | 121, 149, 1247, 1341, 1713, 1774, 1788, 1830 |
| TspMI | CCCGGG | 1 cut(s) | 412 |
| TspRI | CASTG | 2 cut(s) | 951, 1427 |
| VneI | GTGCAC | 1 cut(s) | 1423 |
| VpaK11BI | GGWCC | 3 cut(s) | 118, 807, 891 |
| XapI | RAATTY | 5 cut(s) | 691, 1035, 1525, 1762, 1780 |
| XceI | RCATGY | 1 cut(s) | 1727 |
| XmaI | CCCGGG | 1 cut(s) | 412 |
| XmiI | GTMKAC | 1 cut(s) | 905 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1922 |
| ZrmI | AGTACT | 1 cut(s) | 262 |
| Zsp2I | ATGCAT | 1 cut(s) | 1138 |