Protein RMD5 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g26950 |
| rosa_laevigata | RLG00000019350 |
| rosa_multiflora | Rmu_sc0004453.1_g000005 Rmu_sc0027036.1_g000003 |
| rosa_rugosa | Rorug07G0234500.1 |
| rosa_samantha | Rh4AG099700 Rh4AG100200 Rh7BG369000 Rh7CG483200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 118 |
| AcuI | CTGAAG | 1 cut(s) | 342 |
| AcyI | GRCGYC | 1 cut(s) | 386 |
| AflIII | ACRYGT | 1 cut(s) | 355 |
| AjnI | CCWGG | 1 cut(s) | 95 |
| AluBI | AGCT | 3 cut(s) | 28, 91, 155 |
| AluI | AGCT | 3 cut(s) | 28, 91, 155 |
| AoxI | GGCC | 2 cut(s) | 63, 118 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 345, 377 |
| AsuHPI | GGTGA | 2 cut(s) | 30, 41 |
| BalI | TGGCCA | 1 cut(s) | 120 |
| BanII | GRGCYC | 1 cut(s) | 137 |
| BbsI | GAAGAC | 1 cut(s) | 2 |
| BccI | CCATC | 1 cut(s) | 74 |
| BceAI | ACGGC | 1 cut(s) | 412 |
| BciT130I | CCWGG | 1 cut(s) | 97 |
| BfaI | CTAG | 1 cut(s) | 245 |
| BfmI | CTRYAG | 1 cut(s) | 150 |
| Bme1390I | CCNGG | 1 cut(s) | 97 |
| BmiI | GGNNCC | 1 cut(s) | 278 |
| BmrFI | CCNGG | 1 cut(s) | 97 |
| BmrI | ACTGGG | 1 cut(s) | 93 |
| BmuI | ACTGGG | 1 cut(s) | 93 |
| BpiI | GAAGAC | 1 cut(s) | 2 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BsaHI | GRCGYC | 1 cut(s) | 386 |
| BsaJI | CCNNGG | 1 cut(s) | 60 |
| Bse1I | ACTGG | 4 cut(s) | 25, 88, 121, 251 |
| BseBI | CCWGG | 1 cut(s) | 97 |
| BseDI | CCNNGG | 1 cut(s) | 60 |
| BseNI | ACTGG | 4 cut(s) | 25, 88, 121, 251 |
| BshFI | GGCC | 2 cut(s) | 65, 120 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| BsnI | GGCC | 2 cut(s) | 65, 120 |
| Bsp1286I | GDGCHC | 1 cut(s) | 137 |
| BspANI | GGCC | 2 cut(s) | 65, 120 |
| BspLI | GGNNCC | 1 cut(s) | 278 |
| BsrI | ACTGG | 4 cut(s) | 25, 88, 121, 251 |
| BssECI | CCNNGG | 1 cut(s) | 60 |
| BssNI | GRCGYC | 1 cut(s) | 386 |
| BssT1I | CCWWGG | 1 cut(s) | 60 |
| Bst2UI | CCWGG | 1 cut(s) | 97 |
| Bst4CI | ACNGT | 2 cut(s) | 47, 266 |
| Bst6I | CTCTTC | 2 cut(s) | 186, 206 |
| BstACI | GRCGYC | 1 cut(s) | 386 |
| BstC8I | GCNNGC | 1 cut(s) | 368 |
| BstDEI | CTNAG | 1 cut(s) | 306 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 97, 141, 367 |
| BstNI | CCWGG | 1 cut(s) | 97 |
| BstNSI | RCATGY | 1 cut(s) | 359 |
| BstSCI | CCNGG | 1 cut(s) | 95 |
| BstSFI | CTRYAG | 1 cut(s) | 150 |
| BstV2I | GAAGAC | 1 cut(s) | 2 |
| BsuRI | GGCC | 2 cut(s) | 65, 120 |
| BtsIMutI | CAGTG | 1 cut(s) | 258 |
| Cac8I | GCNNGC | 1 cut(s) | 368 |
| CseI | GACGC | 1 cut(s) | 375 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 321, 356 |
| CviAII | CATG | 2 cut(s) | 145, 356 |
| CviJI | RGCY | 7 cut(s) | 28, 65, 91, 120, 135, 155, 302 |
| CviKI_1 | RGCY | 7 cut(s) | 28, 65, 91, 120, 135, 155, 302 |
| DdeI | CTNAG | 1 cut(s) | 306 |
| EaeI | YGGCCR | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 2 cut(s) | 186, 206 |
| EarI | CTCTTC | 2 cut(s) | 186, 206 |
| Eco130I | CCWWGG | 1 cut(s) | 60 |
| Eco24I | GRGCYC | 1 cut(s) | 137 |
| Eco57I | CTGAAG | 1 cut(s) | 342 |
| EcoRII | CCWGG | 1 cut(s) | 95 |
| EcoT14I | CCWWGG | 1 cut(s) | 60 |
| EcoT38I | GRGCYC | 1 cut(s) | 137 |
| ErhI | CCWWGG | 1 cut(s) | 60 |
| FaeI | CATG | 2 cut(s) | 148, 359 |
| FaiI | YATR | 9 cut(s) | 7, 16, 43, 146, 152, 194, 233, 338, 357 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FatI | CATG | 2 cut(s) | 144, 355 |
| FriOI | GRGCYC | 1 cut(s) | 137 |
| FspBI | CTAG | 1 cut(s) | 245 |
| HaeIII | GGCC | 2 cut(s) | 65, 120 |
| HgaI | GACGC | 1 cut(s) | 375 |
| Hin1I | GRCGYC | 1 cut(s) | 386 |
| Hin1II | CATG | 2 cut(s) | 148, 359 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HphI | GGTGA | 2 cut(s) | 30, 41 |
| Hpy188III | TCNNGA | 1 cut(s) | 351 |
| HpyCH4III | ACNGT | 2 cut(s) | 47, 266 |
| HpyCH4V | TGCA | 1 cut(s) | 366 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 97, 141, 367 |
| HpyF3I | CTNAG | 1 cut(s) | 306 |
| Hsp92I | GRCGYC | 1 cut(s) | 386 |
| Hsp92II | CATG | 2 cut(s) | 148, 359 |
| LmnI | GCTCC | 1 cut(s) | 88 |
| MaeI | CTAG | 1 cut(s) | 245 |
| MaeIII | GTNAC | 3 cut(s) | 36, 47, 79 |
| MboII | GAAGA | 3 cut(s) | 173, 223, 335 |
| MhlI | GDGCHC | 1 cut(s) | 137 |
| MlsI | TGGCCA | 1 cut(s) | 120 |
| MluCI | AATT | 1 cut(s) | 101 |
| MluNI | TGGCCA | 1 cut(s) | 120 |
| MnlI | CCTC | 3 cut(s) | 189, 313, 418 |
| Mox20I | TGGCCA | 1 cut(s) | 120 |
| MscI | TGGCCA | 1 cut(s) | 120 |
| MseI | TTAA | 1 cut(s) | 421 |
| Msp20I | TGGCCA | 1 cut(s) | 120 |
| MspR9I | CCNGG | 1 cut(s) | 97 |
| MvaI | CCWGG | 1 cut(s) | 97 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 97, 141, 367 |
| NlaIII | CATG | 2 cut(s) | 148, 359 |
| NlaIV | GGNNCC | 1 cut(s) | 278 |
| NmuCI | GTSAC | 3 cut(s) | 36, 47, 79 |
| NspI | RCATGY | 1 cut(s) | 359 |
| PciI | ACATGT | 1 cut(s) | 355 |
| PscI | ACATGT | 1 cut(s) | 355 |
| Psp6I | CCWGG | 1 cut(s) | 95 |
| PspGI | CCWGG | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 1 cut(s) | 278 |
| SaqAI | TTAA | 1 cut(s) | 421 |
| ScrFI | CCNGG | 1 cut(s) | 97 |
| SduI | GDGCHC | 1 cut(s) | 137 |
| SetI | ASST | 7 cut(s) | 30, 54, 93, 157, 181, 337, 410 |
| SfcI | CTRYAG | 1 cut(s) | 150 |
| SmlI | CTYRAG | 1 cut(s) | 185 |
| SmoI | CTYRAG | 1 cut(s) | 185 |
| Sse9I | AATT | 1 cut(s) | 101 |
| SspI | AATATT | 1 cut(s) | 112 |
| SspMI | CTAG | 1 cut(s) | 245 |
| StyD4I | CCNGG | 1 cut(s) | 95 |
| StyI | CCWWGG | 1 cut(s) | 60 |
| TaaI | ACNGT | 2 cut(s) | 47, 266 |
| TasI | AATT | 1 cut(s) | 101 |
| Tru1I | TTAA | 1 cut(s) | 421 |
| Tru9I | TTAA | 1 cut(s) | 421 |
| TscAI | CASTG | 1 cut(s) | 258 |
| TseFI | GTSAC | 3 cut(s) | 36, 47, 79 |
| Tsp45I | GTSAC | 3 cut(s) | 36, 47, 79 |
| TspDTI | ATGAA | 3 cut(s) | 209, 234, 248 |
| TspRI | CASTG | 1 cut(s) | 258 |
| XceI | RCATGY | 1 cut(s) | 359 |
| XspI | CTAG | 1 cut(s) | 245 |