Rh7CG071100
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0022856
Physical Location & Seq
Forward (+)
5072023 .. 5074841
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG071100.1

Sequence Viewer

Length: 360 bp
ATGAACAATATCTTGCTCAATGAGCATGATAATGCAAAATTGAGCGACTACGGACTGTCCATTGTCTCAGAAGAAACTGATATGTCTATGGCAAATGAAGGCCATAAGTCATGGCAAATGAAAAGTATAGAGGATGATGCTTATAGCTTCGGATATATATTGCTCGAGGCTATTGTTGGAGCTTCCGTCTCTGTTAGAAGAGAGGCATTCCCGCTAAATGATATGCTGCCGGAGCTCCGACCGTCCGCCGCCACTCAATTTCGAAGCAAAGTACCAACCCCTAGATCTTTGAGCTTCTCCCAATTTCAGCTAAAATTACCGAAAGTCGGAAACAGGGGCCTCTCAATCTCTCATGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

119

Amino Acids

13.24

Weight (kDa)

5.87

Isoelectric Point (pI)

46.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022856)

Species Orthologous Gene IDs
rosa_laevigata RLG00000004520 RLG00000010231
rosa_samantha Rh7CG071100 Rh7DG070600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 212, 246, 249
AfaI GTAC 1 cut(s) 273
AfiI CCNNNNNNNGG 1 cut(s) 326
AluBI AGCT 5 cut(s) 147, 182, 235, 294, 310
AluI AGCT 5 cut(s) 147, 182, 235, 294, 310
Alw21I GWGCWC 1 cut(s) 237
Alw26I GTCTC 2 cut(s) 70, 193
Ama87I CYCGRG 1 cut(s) 164
AoxI GGCC 2 cut(s) 100, 337
ApeKI GCWGC 1 cut(s) 226
AspS9I GGNCC 1 cut(s) 337
AsuII TTCGAA 1 cut(s) 262
AvaI CYCGRG 1 cut(s) 164
BanII GRGCYC 1 cut(s) 237
Bbv12I GWGCWC 1 cut(s) 237
BbvI GCAGC 1 cut(s) 213
BcoDI GTCTC 2 cut(s) 70, 193
BfaI CTAG 1 cut(s) 282
BglII AGATCT 1 cut(s) 284
BisI GCNGC 2 cut(s) 227, 249
BlsI GCNGC 2 cut(s) 228, 250
BmeT110I CYCGRG 1 cut(s) 164
BmgT120I GGNCC 1 cut(s) 337
BmiI GGNNCC 1 cut(s) 338
BmsI GCATC 1 cut(s) 127
Bpu14I TTCGAA 1 cut(s) 262
BsaXI ACNNNNNCTCC 2 cut(s) 171, 201
Bsc4I CCNNNNNNNGG 1 cut(s) 326
BseGI GGATG 1 cut(s) 139
BseLI CCNNNNNNNGG 1 cut(s) 326
BseMII CTCAG 1 cut(s) 81
BseXI GCAGC 1 cut(s) 213
Bsh1285I CGRYCG 1 cut(s) 242
BshFI GGCC 2 cut(s) 102, 339
BsiEI CGRYCG 1 cut(s) 242
BsiHKAI GWGCWC 1 cut(s) 237
BsiHKCI CYCGRG 1 cut(s) 164
BsiSI CCGG 1 cut(s) 230
BslI CCNNNNNNNGG 1 cut(s) 326
BsmAI GTCTC 2 cut(s) 70, 193
BsmBI CGTCTC 1 cut(s) 193
BsmI GAATGC 1 cut(s) 206
BsnI GGCC 2 cut(s) 102, 339
BsoBI CYCGRG 1 cut(s) 164
Bsp119I TTCGAA 1 cut(s) 262
Bsp1286I GDGCHC 1 cut(s) 237
Bsp143I GATC 1 cut(s) 284
BspACI CCGC 3 cut(s) 212, 246, 249
BspANI GGCC 2 cut(s) 102, 339
BspCNI CTCAG 1 cut(s) 80
BspLI GGNNCC 1 cut(s) 338
BspT104I TTCGAA 1 cut(s) 262
BssMI GATC 1 cut(s) 284
Bst4CI ACNGT 2 cut(s) 57, 243
Bst6I CTCTTC 1 cut(s) 193
BstBI TTCGAA 1 cut(s) 262
BstDEI CTNAG 2 cut(s) 67, 357
BstF5I GGATG 1 cut(s) 139
BstKTI GATC 1 cut(s) 287
BstMAI GTCTC 2 cut(s) 70, 193
BstMBI GATC 1 cut(s) 284
BstMCI CGRYCG 1 cut(s) 242
BstMWI GCNNNNNNNGC 2 cut(s) 22, 232
BstV1I GCAGC 1 cut(s) 213
BstX2I RGATCY 1 cut(s) 284
BstYI RGATCY 1 cut(s) 284
BsuRI GGCC 2 cut(s) 102, 339
BtsCI GGATG 1 cut(s) 139
Cfr13I GGNCC 1 cut(s) 337
Csp6I GTAC 1 cut(s) 272
CviAII CATG 3 cut(s) 26, 111, 353
CviJI RGCY 8 cut(s) 102, 147, 170, 182, 235, 294, 310, 339
CviKI_1 RGCY 8 cut(s) 102, 147, 170, 182, 235, 294, 310, 339
CviQI GTAC 1 cut(s) 272
DdeI CTNAG 2 cut(s) 67, 357
DpnI GATC 1 cut(s) 286
DpnII GATC 1 cut(s) 284
Eam1104I CTCTTC 1 cut(s) 193
EarI CTCTTC 1 cut(s) 193
EciI GGCGGA 1 cut(s) 235
Ecl136II GAGCTC 1 cut(s) 235
Eco24I GRGCYC 1 cut(s) 237
Eco53kI GAGCTC 1 cut(s) 235
Eco88I CYCGRG 1 cut(s) 164
EcoICRI GAGCTC 1 cut(s) 235
EcoO109I RGGNCCY 1 cut(s) 337
EcoT38I GRGCYC 1 cut(s) 237
Esp3I CGTCTC 1 cut(s) 193
FaeI CATG 3 cut(s) 29, 114, 356
FatI CATG 3 cut(s) 25, 110, 352
FauI CCCGC 1 cut(s) 219
Fnu4HI GCNGC 2 cut(s) 227, 249
FokI GGATG 1 cut(s) 146
FriOI GRGCYC 1 cut(s) 237
Fsp4HI GCNGC 2 cut(s) 227, 249
FspBI CTAG 1 cut(s) 282
GluI GCNGC 2 cut(s) 227, 249
HaeIII GGCC 2 cut(s) 102, 339
HapII CCGG 1 cut(s) 230
Hin1II CATG 3 cut(s) 29, 114, 356
HpaII CCGG 1 cut(s) 230
Hpy188I TCNGA 4 cut(s) 70, 152, 239, 329
HpyAV CCTTC 1 cut(s) 92
HpyCH4III ACNGT 2 cut(s) 57, 243
HpyCH4V TGCA 1 cut(s) 35
HpyF10VI GCNNNNNNNGC 2 cut(s) 22, 232
HpyF3I CTNAG 2 cut(s) 67, 357
Hsp92II CATG 3 cut(s) 29, 114, 356
Kzo9I GATC 1 cut(s) 284
LmnI GCTCC 3 cut(s) 179, 232, 240
LpnPI CCDG 2 cut(s) 243, 319
Lsp1109I GCAGC 1 cut(s) 213
LweI GCATC 1 cut(s) 127
MaeI CTAG 1 cut(s) 282
MalI GATC 1 cut(s) 286
MboI GATC 1 cut(s) 284
MboII GAAGA 2 cut(s) 83, 210
MflI RGATCY 1 cut(s) 284
MhlI GDGCHC 1 cut(s) 237
MluCI AATT 4 cut(s) 38, 257, 302, 314
MmeI TCCRAC 3 cut(s) 157, 262, 307
MnlI CCTC 4 cut(s) 124, 160, 196, 350
MslI CAYNNNNRTG 1 cut(s) 30
MspI CCGG 1 cut(s) 230
Mva1269I GAATGC 1 cut(s) 206
MwoI GCNNNNNNNGC 2 cut(s) 22, 232
NdeII GATC 1 cut(s) 284
NlaIII CATG 3 cut(s) 29, 114, 356
NlaIV GGNNCC 1 cut(s) 338
NspV TTCGAA 1 cut(s) 262
PaeR7I CTCGAG 1 cut(s) 164
PctI GAATGC 1 cut(s) 206
PkrI GCNGC 2 cut(s) 228, 250
Psp124BI GAGCTC 1 cut(s) 237
PspN4I GGNNCC 1 cut(s) 338
PspPI GGNCC 1 cut(s) 337
PspXI VCTCGAGB 1 cut(s) 164
PsuI RGATCY 1 cut(s) 284
RsaI GTAC 1 cut(s) 273
RsaNI GTAC 1 cut(s) 272
RseI CAYNNNNRTG 1 cut(s) 30
SacI GAGCTC 1 cut(s) 237
SatI GCNGC 2 cut(s) 227, 249
Sau3AI GATC 1 cut(s) 284
Sau96I GGNCC 1 cut(s) 337
SduI GDGCHC 1 cut(s) 237
SetI ASST 5 cut(s) 149, 184, 237, 296, 312
SfaNI GCATC 1 cut(s) 127
Sfr274I CTCGAG 1 cut(s) 164
SfuI TTCGAA 1 cut(s) 262
SgeI CNNG 9 cut(s) 25, 38, 123, 176, 178, 223, 242, 294, 346
SlaI CTCGAG 1 cut(s) 164
SmiMI CAYNNNNRTG 1 cut(s) 30
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
Sse9I AATT 4 cut(s) 38, 257, 302, 314
SsiI CCGC 3 cut(s) 212, 246, 249
SspMI CTAG 1 cut(s) 282
SstI GAGCTC 1 cut(s) 237
TaaI ACNGT 2 cut(s) 57, 243
TaqI TCGA 2 cut(s) 165, 262
TasI AATT 4 cut(s) 38, 257, 302, 314
TauI GCSGC 1 cut(s) 251
TseI GCWGC 1 cut(s) 226
TspDTI ATGAA 3 cut(s) 17, 111, 134
TspGWI ACGGA 2 cut(s) 66, 175
XhoI CTCGAG 1 cut(s) 164
XspI CTAG 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.