Rh7DG199000

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
18759170 .. 18760250
1081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG199000.1

Sequence Viewer

Length: 309 bp
ATGGAGCTACTTAGGAAACCAAATATTTCAGACTTTTTCCTTGCACTTTCCATCTTTGATGAACAAGGAATCGAGAGGGAAGCAAAAAAGCTCATTTCGGTGACCTACAAGATTCTTGATACTGCCATACAACAACGGATGCATTATACCTTGGCCAAAGGTGAAAGGAAAGACTTTCTGCAATTCGCCTTGGAATATCATAATCATGAAGATAGTGCAATATTGATTACAATGCAACAACTGAAGGCAGTACTCATGGACATTGTGGTAGGCGAAACCGAGACCGTGACGGCTATAGTGGAATGGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

11.84

Weight (kDa)

5.1

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020993)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12334
rosa_chinensis RchiOBHm_Chr4g0420041
rosa_multiflora Rmu_co8043834.1_g000001
rosa_samantha Rh4BG225000 Rh7DG199000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 153
AcuI CTGAAG 1 cut(s) 263
AfaI GTAC 1 cut(s) 252
AluBI AGCT 2 cut(s) 7, 91
AluI AGCT 2 cut(s) 7, 91
Alw26I GTCTC 1 cut(s) 275
AoxI GGCC 1 cut(s) 153
AsuHPI GGTGA 2 cut(s) 112, 173
BalI TGGCCA 1 cut(s) 155
BccI CCATC 1 cut(s) 59
BceAI ACGGC 1 cut(s) 306
BcoDI GTCTC 1 cut(s) 275
BfmI CTRYAG 1 cut(s) 294
BmcAI AGTACT 1 cut(s) 252
BmsI GCATC 1 cut(s) 129
BsaI GGTCTC 1 cut(s) 275
BsaJI CCNNGG 2 cut(s) 150, 189
BseDI CCNNGG 2 cut(s) 150, 189
BseGI GGATG 1 cut(s) 144
BshFI GGCC 1 cut(s) 155
BsmAI GTCTC 1 cut(s) 275
BsnI GGCC 1 cut(s) 155
Bso31I GGTCTC 1 cut(s) 275
BspANI GGCC 1 cut(s) 155
BspHI TCATGA 1 cut(s) 205
BspTNI GGTCTC 1 cut(s) 275
BssECI CCNNGG 2 cut(s) 150, 189
BssT1I CCWWGG 2 cut(s) 150, 189
Bst4CI ACNGT 1 cut(s) 286
BstDEI CTNAG 1 cut(s) 11
BstEII GGTNACC 1 cut(s) 100
BstF5I GGATG 1 cut(s) 144
BstMAI GTCTC 1 cut(s) 275
BstPI GGTNACC 1 cut(s) 100
BstSFI CTRYAG 1 cut(s) 294
BsuRI GGCC 1 cut(s) 155
BtsCI GGATG 1 cut(s) 144
CciI TCATGA 1 cut(s) 205
Csp6I GTAC 1 cut(s) 251
CviAII CATG 2 cut(s) 206, 256
CviJI RGCY 4 cut(s) 7, 91, 155, 293
CviKI_1 RGCY 4 cut(s) 7, 91, 155, 293
CviQI GTAC 1 cut(s) 251
DdeI CTNAG 1 cut(s) 11
EaeI YGGCCR 1 cut(s) 153
Eco130I CCWWGG 2 cut(s) 150, 189
Eco31I GGTCTC 1 cut(s) 275
Eco57I CTGAAG 1 cut(s) 263
Eco91I GGTNACC 1 cut(s) 100
EcoO65I GGTNACC 1 cut(s) 100
EcoT14I CCWWGG 2 cut(s) 150, 189
EcoT22I ATGCAT 1 cut(s) 144
ErhI CCWWGG 2 cut(s) 150, 189
FaeI CATG 2 cut(s) 209, 259
FaiI YATR 6 cut(s) 128, 147, 201, 207, 257, 296
FatI CATG 2 cut(s) 205, 255
FokI GGATG 1 cut(s) 151
HaeIII GGCC 1 cut(s) 155
Hin1II CATG 2 cut(s) 209, 259
HinfI GANTC 2 cut(s) 69, 112
HphI GGTGA 2 cut(s) 112, 173
Hpy188I TCNGA 1 cut(s) 31
Hpy188III TCNNGA 3 cut(s) 73, 116, 206
HpyAV CCTTC 1 cut(s) 238
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4V TGCA 5 cut(s) 44, 142, 181, 218, 235
HpyF3I CTNAG 1 cut(s) 11
Hsp92II CATG 2 cut(s) 209, 259
LmnI GCTCC 1 cut(s) 4
LweI GCATC 1 cut(s) 129
MaeIII GTNAC 2 cut(s) 100, 286
MboII GAAGA 1 cut(s) 221
MlsI TGGCCA 1 cut(s) 155
MluCI AATT 1 cut(s) 182
MluNI TGGCCA 1 cut(s) 155
MnlI CCTC 1 cut(s) 69
Mox20I TGGCCA 1 cut(s) 155
Mph1103I ATGCAT 1 cut(s) 144
MscI TGGCCA 1 cut(s) 155
MslI CAYNNNNRTG 2 cut(s) 98, 204
Msp20I TGGCCA 1 cut(s) 155
NlaIII CATG 2 cut(s) 209, 259
NmuCI GTSAC 2 cut(s) 100, 286
NsiI ATGCAT 1 cut(s) 144
PagI TCATGA 1 cut(s) 205
PfeI GAWTC 2 cut(s) 69, 112
PspEI GGTNACC 1 cut(s) 100
RsaI GTAC 1 cut(s) 252
RsaNI GTAC 1 cut(s) 251
RseI CAYNNNNRTG 2 cut(s) 98, 204
ScaI AGTACT 1 cut(s) 252
SetI ASST 5 cut(s) 9, 93, 107, 152, 163
SfaNI GCATC 1 cut(s) 129
SfcI CTRYAG 1 cut(s) 294
SmiMI CAYNNNNRTG 2 cut(s) 98, 204
Sse9I AATT 1 cut(s) 182
SspI AATATT 2 cut(s) 25, 222
StyI CCWWGG 2 cut(s) 150, 189
TaaI ACNGT 1 cut(s) 286
TaqI TCGA 1 cut(s) 72
TasI AATT 1 cut(s) 182
TatI WGTACW 1 cut(s) 250
TfiI GAWTC 2 cut(s) 69, 112
TseFI GTSAC 2 cut(s) 100, 286
Tsp45I GTSAC 2 cut(s) 100, 286
TspDTI ATGAA 2 cut(s) 75, 222
TspGWI ACGGA 1 cut(s) 151
ZrmI AGTACT 1 cut(s) 252
Zsp2I ATGCAT 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.