No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0003878.1_g000002 |
| rosa_samantha | Rh4DG242100 Rh7BG102500 Rh7DG239300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 61 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 202 |
| Acc36I | ACCTGC | 1 cut(s) | 61 |
| AciI | CCGC | 3 cut(s) | 36, 127, 239 |
| AclWI | GGATC | 2 cut(s) | 290, 303 |
| AcoI | YGGCCR | 1 cut(s) | 268 |
| AcuI | CTGAAG | 1 cut(s) | 58 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 266 |
| AgsI | TTSAA | 1 cut(s) | 163 |
| AleI | CACNNNNGTG | 1 cut(s) | 86 |
| AlwI | GGATC | 2 cut(s) | 290, 303 |
| AoxI | GGCC | 1 cut(s) | 268 |
| ApeKI | GCWGC | 1 cut(s) | 145 |
| AspA2I | CCTAGG | 1 cut(s) | 7 |
| AspS9I | GGNCC | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 1 cut(s) | 282 |
| AvaII | GGWCC | 1 cut(s) | 182 |
| AvrII | CCTAGG | 1 cut(s) | 7 |
| BamHI | GGATCC | 1 cut(s) | 295 |
| BbvI | GCAGC | 1 cut(s) | 132 |
| BccI | CCATC | 1 cut(s) | 233 |
| BfaI | CTAG | 2 cut(s) | 8, 242 |
| BfuAI | ACCTGC | 1 cut(s) | 61 |
| BglII | AGATCT | 1 cut(s) | 29 |
| BisI | GCNGC | 3 cut(s) | 36, 146, 239 |
| BlnI | CCTAGG | 1 cut(s) | 7 |
| BlsI | GCNGC | 3 cut(s) | 37, 147, 240 |
| Bme18I | GGWCC | 1 cut(s) | 182 |
| BmgT120I | GGNCC | 1 cut(s) | 182 |
| BmiI | GGNNCC | 1 cut(s) | 297 |
| BsaJI | CCNNGG | 3 cut(s) | 7, 104, 167 |
| BsaWI | WCCGGW | 1 cut(s) | 292 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 266 |
| Bse1I | ACTGG | 1 cut(s) | 86 |
| Bse3DI | GCAATG | 1 cut(s) | 134 |
| BseDI | CCNNGG | 3 cut(s) | 7, 104, 167 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 266 |
| BseMI | GCAATG | 1 cut(s) | 134 |
| BseMII | CTCAG | 1 cut(s) | 215 |
| BseNI | ACTGG | 1 cut(s) | 86 |
| BseXI | GCAGC | 1 cut(s) | 132 |
| BseYI | CCCAGC | 1 cut(s) | 234 |
| BsgI | GTGCAG | 2 cut(s) | 39, 131 |
| BshFI | GGCC | 1 cut(s) | 270 |
| BsiSI | CCGG | 1 cut(s) | 293 |
| BslFI | GGGAC | 2 cut(s) | 63, 205 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 266 |
| BsmFI | GGGAC | 2 cut(s) | 63, 205 |
| BsnI | GGCC | 1 cut(s) | 270 |
| Bsp143I | GATC | 3 cut(s) | 29, 250, 295 |
| BspACI | CCGC | 3 cut(s) | 36, 127, 239 |
| BspANI | GGCC | 1 cut(s) | 270 |
| BspCNI | CTCAG | 1 cut(s) | 214 |
| BspLI | GGNNCC | 1 cut(s) | 297 |
| BspMI | ACCTGC | 1 cut(s) | 61 |
| BspPI | GGATC | 2 cut(s) | 290, 303 |
| BsrDI | GCAATG | 1 cut(s) | 134 |
| BsrI | ACTGG | 1 cut(s) | 86 |
| BssECI | CCNNGG | 3 cut(s) | 7, 104, 167 |
| BssMI | GATC | 3 cut(s) | 29, 250, 295 |
| BssT1I | CCWWGG | 3 cut(s) | 7, 104, 167 |
| Bst4CI | ACNGT | 4 cut(s) | 63, 96, 118, 213 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 97, 145 |
| BstDEI | CTNAG | 1 cut(s) | 201 |
| BstKTI | GATC | 3 cut(s) | 32, 253, 298 |
| BstMBI | GATC | 3 cut(s) | 29, 250, 295 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 97, 145 |
| BstV1I | GCAGC | 1 cut(s) | 132 |
| BstX2I | RGATCY | 2 cut(s) | 29, 295 |
| BstYI | RGATCY | 2 cut(s) | 29, 295 |
| BsuRI | GGCC | 1 cut(s) | 270 |
| BtsIMutI | CAGTG | 1 cut(s) | 93 |
| BveI | ACCTGC | 1 cut(s) | 61 |
| Cfr13I | GGNCC | 1 cut(s) | 182 |
| CviJI | RGCY | 6 cut(s) | 123, 192, 238, 270, 276, 319 |
| CviKI_1 | RGCY | 6 cut(s) | 123, 192, 238, 270, 276, 319 |
| DdeI | CTNAG | 1 cut(s) | 201 |
| DpnI | GATC | 3 cut(s) | 31, 252, 297 |
| DpnII | GATC | 3 cut(s) | 29, 250, 295 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 202 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 202 |
| EaeI | YGGCCR | 1 cut(s) | 268 |
| Eco130I | CCWWGG | 3 cut(s) | 7, 104, 167 |
| Eco47I | GGWCC | 1 cut(s) | 182 |
| Eco57I | CTGAAG | 1 cut(s) | 58 |
| EcoT14I | CCWWGG | 3 cut(s) | 7, 104, 167 |
| ErhI | CCWWGG | 3 cut(s) | 7, 104, 167 |
| FaiI | YATR | 3 cut(s) | 22, 176, 322 |
| FaqI | GGGAC | 2 cut(s) | 63, 205 |
| Fnu4HI | GCNGC | 3 cut(s) | 36, 146, 239 |
| Fsp4HI | GCNGC | 3 cut(s) | 36, 146, 239 |
| FspBI | CTAG | 2 cut(s) | 8, 242 |
| GluI | GCNGC | 3 cut(s) | 36, 146, 239 |
| GsaI | CCCAGC | 1 cut(s) | 238 |
| HaeIII | GGCC | 1 cut(s) | 270 |
| HapII | CCGG | 1 cut(s) | 293 |
| HpaII | CCGG | 1 cut(s) | 293 |
| HphI | GGTGA | 1 cut(s) | 282 |
| Hpy188III | TCNNGA | 2 cut(s) | 43, 254 |
| HpyAV | CCTTC | 3 cut(s) | 49, 82, 169 |
| HpyCH4III | ACNGT | 4 cut(s) | 63, 96, 118, 213 |
| HpyCH4V | TGCA | 5 cut(s) | 56, 91, 139, 148, 306 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 97, 145 |
| HpyF3I | CTNAG | 1 cut(s) | 201 |
| Kzo9I | GATC | 3 cut(s) | 29, 250, 295 |
| LpnPI | CCDG | 6 cut(s) | 66, 99, 198, 248, 306, 313 |
| Lsp1109I | GCAGC | 1 cut(s) | 132 |
| MaeI | CTAG | 2 cut(s) | 8, 242 |
| MalI | GATC | 3 cut(s) | 31, 252, 297 |
| MboI | GATC | 3 cut(s) | 29, 250, 295 |
| MflI | RGATCY | 2 cut(s) | 29, 295 |
| MmeI | TCCRAC | 1 cut(s) | 160 |
| MnlI | CCTC | 3 cut(s) | 140, 210, 217 |
| MslI | CAYNNNNRTG | 1 cut(s) | 86 |
| MspI | CCGG | 1 cut(s) | 293 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 97, 145 |
| NdeII | GATC | 3 cut(s) | 29, 250, 295 |
| NlaIV | GGNNCC | 1 cut(s) | 297 |
| OliI | CACNNNNGTG | 1 cut(s) | 86 |
| PaqCI | CACCTGC | 1 cut(s) | 61 |
| PkrI | GCNGC | 3 cut(s) | 37, 147, 240 |
| PspFI | CCCAGC | 1 cut(s) | 234 |
| PspN4I | GGNNCC | 1 cut(s) | 297 |
| PspPI | GGNCC | 1 cut(s) | 182 |
| PsuI | RGATCY | 2 cut(s) | 29, 295 |
| RseI | CAYNNNNRTG | 1 cut(s) | 86 |
| SatI | GCNGC | 3 cut(s) | 36, 146, 239 |
| Sau3AI | GATC | 3 cut(s) | 29, 250, 295 |
| Sau96I | GGNCC | 1 cut(s) | 182 |
| SetI | ASST | 6 cut(s) | 9, 55, 74, 106, 187, 202 |
| SinI | GGWCC | 1 cut(s) | 182 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 86 |
| SsiI | CCGC | 3 cut(s) | 36, 127, 239 |
| SspMI | CTAG | 2 cut(s) | 8, 242 |
| StyI | CCWWGG | 3 cut(s) | 7, 104, 167 |
| TaaI | ACNGT | 4 cut(s) | 63, 96, 118, 213 |
| TaqI | TCGA | 1 cut(s) | 253 |
| TaqII | GACCGA | 1 cut(s) | 261 |
| TauI | GCSGC | 2 cut(s) | 38, 241 |
| TscAI | CASTG | 1 cut(s) | 93 |
| TseI | GCWGC | 1 cut(s) | 145 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 207 |
| TspRI | CASTG | 1 cut(s) | 93 |
| VpaK11BI | GGWCC | 1 cut(s) | 182 |
| XmaJI | CCTAGG | 1 cut(s) | 7 |
| XspI | CTAG | 2 cut(s) | 8, 242 |