Rh7DG311200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
36455080 .. 36476772
21693 bp
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UTR
Exon/CDS
Intron
Rh7DG311200.1

Sequence Viewer

Length: 201 bp
ATGGGAGGTGGTGGTGACAACTTGGAGAAGAGAGGAGTCGTTGGTGGCGATTTGGGTTCACCGGGTGTGCTAGAAGAGAGAGAGAAGTCAGACACCCAGAAAGCGCCTCCGTTGTCGTCTCCTTCGCTTCTCCGTCTCCTGCGCCCGAAAACCAGAAATTTCCGGCGATCTAACGTCAAATCTCCGGCACCTCAAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.04

Weight (kDa)

10.49

Isoelectric Point (pI)

83.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020575)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 187
AcsI RAATTY 1 cut(s) 157
AdeI CACNNNGTG 1 cut(s) 65
Alw26I GTCTC 2 cut(s) 123, 140
ApoI RAATTY 1 cut(s) 157
AspLEI GCGC 2 cut(s) 106, 144
AsuC2I CCSGG 1 cut(s) 63
AsuHPI GGTGA 2 cut(s) 26, 51
BanI GGYRCC 1 cut(s) 187
BcnI CCSGG 1 cut(s) 63
BcoDI GTCTC 2 cut(s) 123, 140
BfaI CTAG 1 cut(s) 71
BfoI RGCGCY 1 cut(s) 107
Bme1390I CCNGG 1 cut(s) 63
BmiI GGNNCC 1 cut(s) 189
BmrFI CCNGG 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 177
BpuMI CCSGG 1 cut(s) 63
BseRI GAGGAG 1 cut(s) 48
BshNI GGYRCC 1 cut(s) 187
BsiSI CCGG 3 cut(s) 62, 163, 185
BsmAI GTCTC 2 cut(s) 123, 140
BsmBI CGTCTC 2 cut(s) 123, 140
Bsp143I GATC 1 cut(s) 167
BspLI GGNNCC 1 cut(s) 189
BspT107I GGYRCC 1 cut(s) 187
BssMI GATC 1 cut(s) 167
Bst6I CTCTTC 2 cut(s) 23, 69
BstH2I RGCGCY 1 cut(s) 107
BstHHI GCGC 2 cut(s) 106, 144
BstKTI GATC 1 cut(s) 170
BstMAI GTCTC 2 cut(s) 123, 140
BstMBI GATC 1 cut(s) 167
BstSCI CCNGG 1 cut(s) 61
CfoI GCGC 2 cut(s) 106, 144
DpnI GATC 1 cut(s) 169
DpnII GATC 1 cut(s) 167
DraIII CACNNNGTG 1 cut(s) 65
Eam1104I CTCTTC 2 cut(s) 23, 69
EarI CTCTTC 2 cut(s) 23, 69
Esp3I CGTCTC 2 cut(s) 123, 140
FspBI CTAG 1 cut(s) 71
GlaI GCGC 2 cut(s) 105, 143
HaeII RGCGCY 1 cut(s) 107
HapII CCGG 3 cut(s) 62, 163, 185
HhaI GCGC 2 cut(s) 106, 144
Hin6I GCGC 2 cut(s) 104, 142
HinP1I GCGC 2 cut(s) 104, 142
HinfI GANTC 1 cut(s) 36
HpaII CCGG 3 cut(s) 62, 163, 185
HphI GGTGA 2 cut(s) 26, 51
Hpy166II GTNNAC 1 cut(s) 59
Hpy188I TCNGA 1 cut(s) 91
Hpy8I GTNNAC 1 cut(s) 59
HpyAV CCTTC 1 cut(s) 132
HpyCH4IV ACGT 1 cut(s) 174
HpySE526I ACGT 1 cut(s) 174
HspAI GCGC 2 cut(s) 104, 142
Kzo9I GATC 1 cut(s) 167
LpnPI CCDG 5 cut(s) 75, 110, 152, 166, 176
MaeI CTAG 1 cut(s) 71
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 1 cut(s) 14
MalI GATC 1 cut(s) 169
MboI GATC 1 cut(s) 167
MboII GAAGA 2 cut(s) 40, 86
MluCI AATT 1 cut(s) 157
MlyI GAGTC 1 cut(s) 45
MnlI CCTC 3 cut(s) 26, 117, 201
MspI CCGG 3 cut(s) 62, 163, 185
MspR9I CCNGG 1 cut(s) 63
NciI CCSGG 1 cut(s) 63
NdeII GATC 1 cut(s) 167
NlaIV GGNNCC 1 cut(s) 189
NmuCI GTSAC 1 cut(s) 14
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PleI GAGTC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 44
PspN4I GGNNCC 1 cut(s) 189
Sau3AI GATC 1 cut(s) 167
SchI GAGTC 1 cut(s) 45
ScrFI CCNGG 1 cut(s) 63
SetI ASST 3 cut(s) 10, 177, 193
SmlI CTYRAG 1 cut(s) 192
SmoI CTYRAG 1 cut(s) 192
Sse9I AATT 1 cut(s) 157
SspMI CTAG 1 cut(s) 71
StyD4I CCNGG 1 cut(s) 61
TaiI ACGT 1 cut(s) 177
TasI AATT 1 cut(s) 157
TseFI GTSAC 1 cut(s) 14
Tsp45I GTSAC 1 cut(s) 14
TspGWI ACGGA 2 cut(s) 99, 122
XapI RAATTY 1 cut(s) 157
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.