RNA polymerase II transcription regulator recruiting activity
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0322551 RchiOBHm_Chr4g0408321 |
| rosa_roxburghii | Rroxscaffold_1G00075120 |
| rosa_samantha | Rh1DG171700 Rh2AG641800 Rh4CG157200 |
| rosa_wichuraiana | Rw1G039060 Rw2G048470 Rw4G015700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 195 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 171, 195 |
| AgsI | TTSAA | 2 cut(s) | 147, 227 |
| AluBI | AGCT | 4 cut(s) | 11, 29, 74, 129 |
| AluI | AGCT | 4 cut(s) | 11, 29, 74, 129 |
| Alw21I | GWGCWC | 1 cut(s) | 13 |
| Alw26I | GTCTC | 1 cut(s) | 60 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 18, 50 |
| AxyI | CCTNAGG | 1 cut(s) | 60 |
| BanII | GRGCYC | 1 cut(s) | 13 |
| Bbv12I | GWGCWC | 1 cut(s) | 13 |
| BcoDI | GTCTC | 1 cut(s) | 60 |
| BmsI | GCATC | 1 cut(s) | 208 |
| BoxI | GACNNNNGTC | 1 cut(s) | 49 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 171, 195 |
| Bse1I | ACTGG | 1 cut(s) | 101 |
| Bse21I | CCTNAGG | 1 cut(s) | 60 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 171, 195 |
| BseMII | CTCAG | 2 cut(s) | 51, 194 |
| BseNI | ACTGG | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 1 cut(s) | 13 |
| BslFI | GGGAC | 1 cut(s) | 98 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 171, 195 |
| BsmAI | GTCTC | 1 cut(s) | 60 |
| BsmBI | CGTCTC | 1 cut(s) | 60 |
| BsmFI | GGGAC | 1 cut(s) | 98 |
| Bsp1286I | GDGCHC | 1 cut(s) | 13 |
| BspCNI | CTCAG | 2 cut(s) | 52, 195 |
| BsrI | ACTGG | 1 cut(s) | 101 |
| Bst4CI | ACNGT | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 131 |
| BstDEI | CTNAG | 3 cut(s) | 60, 75, 203 |
| BstMAI | GTCTC | 1 cut(s) | 60 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 49 |
| Bsu36I | CCTNAGG | 1 cut(s) | 60 |
| BtsIMutI | CAGTG | 1 cut(s) | 53 |
| Cac8I | GCNNGC | 1 cut(s) | 131 |
| CviAII | CATG | 3 cut(s) | 15, 90, 190 |
| CviJI | RGCY | 5 cut(s) | 11, 29, 74, 129, 133 |
| CviKI_1 | RGCY | 5 cut(s) | 11, 29, 74, 129, 133 |
| DdeI | CTNAG | 3 cut(s) | 60, 75, 203 |
| Ecl136II | GAGCTC | 1 cut(s) | 11 |
| Eco24I | GRGCYC | 1 cut(s) | 13 |
| Eco53kI | GAGCTC | 1 cut(s) | 11 |
| Eco81I | CCTNAGG | 1 cut(s) | 60 |
| EcoICRI | GAGCTC | 1 cut(s) | 11 |
| EcoT38I | GRGCYC | 1 cut(s) | 13 |
| Esp3I | CGTCTC | 1 cut(s) | 60 |
| FaeI | CATG | 3 cut(s) | 18, 93, 193 |
| FaiI | YATR | 3 cut(s) | 16, 91, 191 |
| FaqI | GGGAC | 1 cut(s) | 98 |
| FatI | CATG | 3 cut(s) | 14, 89, 189 |
| FriOI | GRGCYC | 1 cut(s) | 13 |
| Hin1II | CATG | 3 cut(s) | 18, 93, 193 |
| HincII | GTYRAC | 1 cut(s) | 162 |
| HindII | GTYRAC | 1 cut(s) | 162 |
| HinfI | GANTC | 4 cut(s) | 86, 110, 140, 153 |
| Hpy166II | GTNNAC | 1 cut(s) | 162 |
| Hpy188I | TCNGA | 1 cut(s) | 204 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| Hpy8I | GTNNAC | 1 cut(s) | 162 |
| HpyAV | CCTTC | 1 cut(s) | 221 |
| HpyCH4III | ACNGT | 1 cut(s) | 48 |
| HpyCH4V | TGCA | 1 cut(s) | 217 |
| HpyF3I | CTNAG | 3 cut(s) | 60, 75, 203 |
| Hsp92II | CATG | 3 cut(s) | 18, 93, 193 |
| LmnI | GCTCC | 1 cut(s) | 16 |
| LpnPI | CCDG | 3 cut(s) | 72, 82, 115 |
| LweI | GCATC | 1 cut(s) | 208 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MboII | GAAGA | 3 cut(s) | 77, 135, 177 |
| MfeI | CAATTG | 1 cut(s) | 104 |
| MhlI | GDGCHC | 1 cut(s) | 13 |
| MluCI | AATT | 1 cut(s) | 104 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MnlI | CCTC | 1 cut(s) | 55 |
| MseI | TTAA | 2 cut(s) | 170, 232 |
| MunI | CAATTG | 1 cut(s) | 104 |
| NlaIII | CATG | 3 cut(s) | 18, 93, 193 |
| NmuCI | GTSAC | 1 cut(s) | 20 |
| PfeI | GAWTC | 3 cut(s) | 110, 140, 153 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 195 |
| PleI | GAGTC | 1 cut(s) | 80 |
| PpsI | GAGTC | 1 cut(s) | 80 |
| PshAI | GACNNNNGTC | 1 cut(s) | 49 |
| Psp124BI | GAGCTC | 1 cut(s) | 13 |
| SacI | GAGCTC | 1 cut(s) | 13 |
| SaqAI | TTAA | 2 cut(s) | 170, 232 |
| SchI | GAGTC | 1 cut(s) | 80 |
| SduI | GDGCHC | 1 cut(s) | 13 |
| SetI | ASST | 5 cut(s) | 13, 31, 76, 131, 232 |
| SfaNI | GCATC | 1 cut(s) | 208 |
| Sse9I | AATT | 1 cut(s) | 104 |
| SstI | GAGCTC | 1 cut(s) | 13 |
| TaaI | ACNGT | 1 cut(s) | 48 |
| TaqI | TCGA | 1 cut(s) | 211 |
| TasI | AATT | 1 cut(s) | 104 |
| TfiI | GAWTC | 3 cut(s) | 110, 140, 153 |
| Tru1I | TTAA | 2 cut(s) | 170, 232 |
| Tru9I | TTAA | 2 cut(s) | 170, 232 |
| TscAI | CASTG | 1 cut(s) | 53 |
| TseFI | GTSAC | 1 cut(s) | 20 |
| Tsp45I | GTSAC | 1 cut(s) | 20 |
| TspDTI | ATGAA | 1 cut(s) | 102 |
| TspRI | CASTG | 1 cut(s) | 53 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 195 |