Basic Information
Type: gene
Physical Location & Seq
Forward (+)
54710711 .. 54711805
Rw6G030620.1
Length: 189 bp
ATGGTGAAAACTTCCAAAGTGACTGATGTGGTAGTGGAAGTGGTTGCTGGGGGTGCTAGGGATGTTTTCTGTGAGGCTGTAGAGAGACACAAGGCATCCATATTGGTTTCTGGTAGCCATGGCTATGGAGTTATCAAAAGAGCTGTTTTGGGTAGCGTAAGTGATTACTGTGCTCATCGTGCTCATTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
8.74
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Usp |
PF00582 |
5 - 62 |
1.5e-11 |
Universal stress protein family |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0022801)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AluBI |
AGCT |
1 cut(s)
|
143 |
| AluI |
AGCT |
1 cut(s)
|
143 |
| Alw21I |
GWGCWC |
2 cut(s)
|
175, 184 |
| Alw26I |
GTCTC |
1 cut(s)
|
79 |
| AsuHPI |
GGTGA |
1 cut(s)
|
16 |
| Bbv12I |
GWGCWC |
2 cut(s)
|
175, 184 |
| BcoDI |
GTCTC |
1 cut(s)
|
79 |
| BfaI |
CTAG |
1 cut(s)
|
57 |
| BfmI |
CTRYAG |
1 cut(s)
|
78 |
| BmsI |
GCATC |
1 cut(s)
|
104 |
| BsaJI |
CCNNGG |
1 cut(s)
|
118 |
| BseDI |
CCNNGG |
1 cut(s)
|
118 |
| BseGI |
GGATG |
2 cut(s)
|
67, 95 |
| BseYI |
CCCAGC |
1 cut(s)
|
47 |
| BsiHKAI |
GWGCWC |
2 cut(s)
|
175, 184 |
| BsmAI |
GTCTC |
1 cut(s)
|
79 |
| Bsp1286I |
GDGCHC |
2 cut(s)
|
175, 184 |
| Bsp19I |
CCATGG |
1 cut(s)
|
118 |
| BssECI |
CCNNGG |
1 cut(s)
|
118 |
| BssT1I |
CCWWGG |
1 cut(s)
|
118 |
| Bst4CI |
ACNGT |
1 cut(s)
|
170 |
| BstDSI |
CCRYGG |
1 cut(s)
|
118 |
| BstF5I |
GGATG |
2 cut(s)
|
67, 95 |
| BstMAI |
GTCTC |
1 cut(s)
|
79 |
| BstMWI |
GCNNNNNNNGC |
2 cut(s)
|
53, 179 |
| BstSFI |
CTRYAG |
1 cut(s)
|
78 |
| BstXI |
CCANNNNNNTGG |
1 cut(s)
|
125 |
| BtgI |
CCRYGG |
1 cut(s)
|
118 |
| BtsCI |
GGATG |
2 cut(s)
|
67, 95 |
| CviAII |
CATG |
1 cut(s)
|
119 |
| CviJI |
RGCY |
4 cut(s)
|
77, 117, 123, 143 |
| CviKI_1 |
RGCY |
4 cut(s)
|
77, 117, 123, 143 |
| Eco130I |
CCWWGG |
1 cut(s)
|
118 |
| EcoT14I |
CCWWGG |
1 cut(s)
|
118 |
| ErhI |
CCWWGG |
1 cut(s)
|
118 |
| FaeI |
CATG |
1 cut(s)
|
122 |
| FaiI |
YATR |
3 cut(s)
|
101, 120, 126 |
| FatI |
CATG |
1 cut(s)
|
118 |
| FokI |
GGATG |
2 cut(s)
|
74, 82 |
| FspBI |
CTAG |
1 cut(s)
|
57 |
| GsaI |
CCCAGC |
1 cut(s)
|
51 |
| Hin1II |
CATG |
1 cut(s)
|
122 |
| HphI |
GGTGA |
1 cut(s)
|
16 |
| HpyCH4III |
ACNGT |
1 cut(s)
|
170 |
| HpyF10VI |
GCNNNNNNNGC |
2 cut(s)
|
53, 179 |
| Hsp92II |
CATG |
1 cut(s)
|
122 |
| LpnPI |
CCDG |
2 cut(s)
|
33, 96 |
| LweI |
GCATC |
1 cut(s)
|
104 |
| MaeI |
CTAG |
1 cut(s)
|
57 |
| MaeIII |
GTNAC |
1 cut(s)
|
19 |
| MhlI |
GDGCHC |
2 cut(s)
|
175, 184 |
| MnlI |
CCTC |
1 cut(s)
|
67 |
| MslI |
CAYNNNNRTG |
1 cut(s)
|
123 |
| MwoI |
GCNNNNNNNGC |
2 cut(s)
|
53, 179 |
| NcoI |
CCATGG |
1 cut(s)
|
118 |
| NlaIII |
CATG |
1 cut(s)
|
122 |
| NmuCI |
GTSAC |
1 cut(s)
|
19 |
| PspFI |
CCCAGC |
1 cut(s)
|
47 |
| RseI |
CAYNNNNRTG |
1 cut(s)
|
123 |
| SduI |
GDGCHC |
2 cut(s)
|
175, 184 |
| SetI |
ASST |
1 cut(s)
|
145 |
| SfaNI |
GCATC |
1 cut(s)
|
104 |
| SfcI |
CTRYAG |
1 cut(s)
|
78 |
| SgeI |
CNNG |
5 cut(s)
|
60, 69, 103, 123, 131 |
| SmiMI |
CAYNNNNRTG |
1 cut(s)
|
123 |
| SspMI |
CTAG |
1 cut(s)
|
57 |
| StyI |
CCWWGG |
1 cut(s)
|
118 |
| TaaI |
ACNGT |
1 cut(s)
|
170 |
| TseFI |
GTSAC |
1 cut(s)
|
19 |
| Tsp45I |
GTSAC |
1 cut(s)
|
19 |
| XspI |
CTAG |
1 cut(s)
|
57 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.