Rw6G031540

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0015471
Physical Location & Seq
Reverse (-)
55583001 .. 55585078
2078 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G031540.1

Sequence Viewer

Length: 2037 bp
ATGGCTGTCATGTACTTGAACCGCATAGCTATAGCTCTCACCCACTGCCGCCGAGTCCAGGCCTTCAATCAGGGCAAGGCATTTCACTCCCAGTTGATCAAACTCGGCATTTCCGCCGATGTTTTCCTCTCCAACAATCTGATTTCCATGTACGCGTCCTCGCCTCGTCTCATCGACGATGCACAGAAGCTGTTCGACGAAATGCCTCACAGAAACATTGTCACGTGGACCACCATGGTCTCTGGGTATACTAAGTGCGGGAGAGGTGGTGAGGCTGTAAGGCTATATGGGTTTATGGTGGAGTGGGGTTTGGAGAGGCCCAATGGGTTTATGTACTCTGCTGTGCTCAAGGCTTGTGGTTCGGTGGGTGACCTCGGATTGGGCAGGGTGATCCATGAGAGGATATCTAGTGCTGGGTTCGTGTTTGACACTGTTTTGATGAACACCCTTTTGGATATGTACGTGAAATGTGGGAGTTTGGGTGATGCCAAGAGGGTGTTTGATGGGATGTTGGATAGGAACTCGACGACGTGGAACACGATGATTTCGGGGTATAGTAAGGCTGGTTTGATGGATGAGGCGGTGGGGCTGTTTCGTCGGATGAAAGAGCCGAATGCTGCATCGTGGAACAGTATTATTGCTGGTTTTGTGAATAATGGGAGCCCGCTTGCGTTGGAATTTGTGAGTATGATGCACCGAGAAGGCTTCAGGCTTGATTGTTATACTTTCCCATGTGCTTTTAAGACCTGTGCTTGCTATGGTTCATTAGCCTCTGGGAAGCAGATCCATTGTTATGTTATACAGTCCGGTTTTGAGTCTGATAGATTTACTTTGTCAGCACTGATTGATATGTATTCAAATTTCAATCAATTGGATGAAGGCATAAAGTTGTTTGGTCAGCACTCAAGGTGCAATGCTTCCATTAGTTTGGCACTTTGGAATTCCATGATTTCTGGATATGTCATTAATGAACATAATTGTGCAGCTCTGGGTTTAGTTTCAAAAGTCCATTGCTCAGGTGCACAGATGGATTCTTACACTTACAGTGGTGCTTTAAAGGCCTGCATCAACTCGCTTAACTTGAGACTTGGGCGTCAAGTGCATGGTTTGGTTGTCACCACAGGATATGAGTTGGATTATGTTGTTGGAAGCATTCTTACAGACCTGTATACAAGAGTGGGAAACATTAAGGATGCATTGGGGTTGTTTCACAGGCTTCCAATGAAAGACACTGTAGCCTGGTCTGGTTTGATCATAGGGTGTGCTAAAATGGGACTAAGCTGGTTAGCTTTTTCACTGTTTAGGGATATGGTGTATTTGGATATAGAAGTAGATCAATTTGTCATTTCATTTGTTCTGAAAGTTTGCTCCAGTTTAACATCTCTTGGAAGTGGCAAACAGGTTCATGCTTTCTGTGTTAAGAGTGGATATGAATCTGAGGGGGTTGTAGTGACATCACTGATTGATATGTACTCAAAATGTGGTGCTATTGAGAATGGGTTGGCTCTGTTTGATTCTGTGGCAGACAGAGACACTGTGTGTTGGACTGGAATAATTGTGGGGTGTGGGCAAAATGGAAGAGCTGATGAAGCAATTAAACTTTTCAATAAGATGATAGAATCAGGGTTGAAGCCGAACGAAATTACATATCTAGGAGTTCTTTCTGCCTGCAGGCATGCTGGTTTTGTTAAAAATGCAAGGACCATCTTTAATTCTATGAAAAAAGAGCATGGATTAGAACCTGCTGGATGTTTTAAAGAGGCTTTAGATTTCATTGCTAAGTTGCCATTTGAACCCAACCAAATCATATGGAGATCATTACTTGGAGCCTGTGGAACTCATAAAAACACTGAACTAGTAAATATCGTTGCTGATCGCCTTCTTGCAACTTCACCAGAAGACCCTTCCACATATGTGACACTTTCAAATGTTTATGCAGAATTGGGAATGTGGGTTGATTTAAGCAAAGTTAGAACAGCTGTCAAGAAAGTGGGTGCAAAAAAAGAAGGAAAGAGCTGGATTGAGATTTCAAGATAA

Protein Analysis

678

Amino Acids

74.56

Weight (kDa)

8.33

Isoelectric Point (pI)

27.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 71 - 119 2e-08 PPR repeat family
PPR PF01535 74 - 104 1.4e-06 PPR repeat
PPR_1 PF12854 172 - 202 1.4e-08 PPR repeat
PPR_2 PF13041 174 - 203 2.4e-07 PPR repeat family
PPR PF01535 177 - 203 2.2e-10 PPR repeat
PPR_2 PF13041 510 - 557 8.2e-12 PPR repeat family
PPR PF01535 513 - 543 2.5e-07 PPR repeat
E_motif PF20431 614 - 675 1.6e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08210
fragaria_vesca FvH4_2g26350
malus_domestica MD08G1169600.v1.1
prunus_persica Prupe.1G503500_v2.0.a1 Prupe.1G503500_v2.0.a1
pyrus_communis pycom08g14510
rosa_chinensis RchiOBHm_Chr6g0294931
rosa_laevigata RLG00000011826
rosa_multiflora Rmu_sc0002700.1_g000046
rosa_roxburghii Rroxscaffold_7G00172820
rosa_rugosa Rorug06G0248400
rosa_samantha Rh6AG361600 Rh6BG369100 Rh6CG375600 Rh6DG362100
rosa_wichuraiana Rw6G031540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1092
Acc36I ACCTGC 1 cut(s) 1750
AccI GTMKAC 2 cut(s) 248, 1169
AccII CGCG 1 cut(s) 155
AciI CCGC 6 cut(s) 22, 49, 114, 258, 581, 665
AclWI GGATC 2 cut(s) 385, 778
AcsI RAATTY 3 cut(s) 677, 859, 940
AcuI CTGAAG 1 cut(s) 691
AcvI CACGTG 1 cut(s) 225
AcyI GRCGYC 1 cut(s) 1093
AdeI CACNNNGTG 1 cut(s) 1539
AfaI GTAC 5 cut(s) 14, 152, 335, 461, 1472
AfiI CCNNNNNNNGG 2 cut(s) 58, 379
AflIII ACRYGT 1 cut(s) 153
AhlI ACTAGT 1 cut(s) 1855
AjiI CACGTC 1 cut(s) 531
AjnI CCWGG 2 cut(s) 57, 1238
AjuI GAANNNNNNNTTGG 2 cut(s) 434, 466
AleI CACNNNNGTG 1 cut(s) 1913
AluBI AGCT 9 cut(s) 29, 35, 190, 986, 1281, 1289, 1583, 1979, 2016
AluI AGCT 9 cut(s) 29, 35, 190, 986, 1281, 1289, 1583, 1979, 2016
Alw21I GWGCWC 2 cut(s) 348, 1024
Alw26I GTCTC 4 cut(s) 173, 244, 1078, 1524
Alw44I GTGCAC 1 cut(s) 1020
AlwI GGATC 2 cut(s) 385, 778
AlwNI CAGNNNCTG 1 cut(s) 190
AoxI GGCC 3 cut(s) 60, 317, 1059
ApaLI GTGCAC 1 cut(s) 1020
ApeKI GCWGC 2 cut(s) 617, 983
ApoI RAATTY 3 cut(s) 677, 859, 940
AseI ATTAAT 1 cut(s) 966
Asp700I GAANNNNTTC 1 cut(s) 191
AspS9I GGNCC 3 cut(s) 228, 318, 1701
AsuHPI GGTGA 7 cut(s) 31, 281, 380, 400, 494, 1108, 1884
AvaII GGWCC 2 cut(s) 228, 1701
BaeGI GKGCMC 1 cut(s) 1024
BanII GRGCYC 1 cut(s) 665
BarI GAAGNNNNNNTAC 2 cut(s) 1141, 1173
BbrPI CACGTG 1 cut(s) 225
BbsI GAAGAC 1 cut(s) 1905
Bbv12I GWGCWC 2 cut(s) 348, 1024
BbvI GCAGC 2 cut(s) 604, 995
BccI CCATC 4 cut(s) 497, 565, 1021, 1712
BciT130I CCWGG 2 cut(s) 59, 1240
BclI TGATCA 2 cut(s) 96, 1251
BcoDI GTCTC 4 cut(s) 173, 244, 1078, 1524
BcuI ACTAGT 1 cut(s) 1855
BfaI CTAG 3 cut(s) 408, 1652, 1856
BfmI CTRYAG 3 cut(s) 30, 1233, 1669
BfuAI ACCTGC 1 cut(s) 1750
BisI GCNGC 3 cut(s) 49, 618, 984
BlsI GCNGC 3 cut(s) 50, 619, 985
Bme1390I CCNGG 2 cut(s) 59, 1240
Bme18I GGWCC 2 cut(s) 228, 1701
BmgBI CACGTC 1 cut(s) 531
BmgT120I GGNCC 3 cut(s) 228, 318, 1701
BmiI GGNNCC 2 cut(s) 662, 1828
BmrFI CCNGG 2 cut(s) 59, 1240
BmrI ACTGGG 1 cut(s) 85
BmsI GCATC 6 cut(s) 169, 475, 629, 681, 1074, 1183
BmuI ACTGGG 1 cut(s) 85
BpiI GAAGAC 1 cut(s) 1905
BpmI CTGGAG 1 cut(s) 1354
Bpu10I CCTNAGC 1 cut(s) 1015
BpuEI CTTGAG 3 cut(s) 332, 889, 1102
BsaAI YACGTR 2 cut(s) 225, 463
BsaBI GATNNNNATC 1 cut(s) 1432
BsaHI GRCGYC 1 cut(s) 1093
BsaI GGTCTC 1 cut(s) 244
BsaJI CCNNGG 2 cut(s) 234, 373
BsaWI WCCGGW 1 cut(s) 806
BsaXI ACNNNNNCTCC 4 cut(s) 253, 283, 466, 496
Bsc4I CCNNNNNNNGG 2 cut(s) 58, 379
Bse1I ACTGG 3 cut(s) 91, 1371, 1552
Bse3DI GCAATG 3 cut(s) 919, 1009, 1773
Bse8I GATNNNNATC 1 cut(s) 1432
BseBI CCWGG 2 cut(s) 59, 1240
BseDI CCNNGG 2 cut(s) 234, 373
BseGI GGATG 6 cut(s) 513, 580, 606, 880, 1198, 1754
BseJI GATNNNNATC 1 cut(s) 1432
BseLI CCNNNNNNNGG 2 cut(s) 58, 379
BseMI GCAATG 3 cut(s) 919, 1009, 1773
BseMII CTCAG 2 cut(s) 1029, 1428
BseNI ACTGG 3 cut(s) 91, 1371, 1552
BseSI GKGCMC 1 cut(s) 1024
BseXI GCAGC 2 cut(s) 604, 995
BseYI CCCAGC 1 cut(s) 413
BsgI GTGCAG 1 cut(s) 1002
Bsh1236I CGCG 1 cut(s) 155
BshFI GGCC 3 cut(s) 62, 319, 1061
BsiHKAI GWGCWC 2 cut(s) 348, 1024
BsiSI CCGG 1 cut(s) 807
BslFI GGGAC 1 cut(s) 1287
BslI CCNNNNNNNGG 2 cut(s) 58, 379
BsmAI GTCTC 4 cut(s) 173, 244, 1078, 1524
BsmBI CGTCTC 1 cut(s) 173
BsmFI GGGAC 1 cut(s) 1287
BsmI GAATGC 2 cut(s) 619, 1152
BsnI GGCC 3 cut(s) 62, 319, 1061
Bso31I GGTCTC 1 cut(s) 244
Bsp1286I GDGCHC 3 cut(s) 348, 665, 1024
Bsp143I GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
Bsp19I CCATGG 1 cut(s) 234
BspACI CCGC 6 cut(s) 22, 49, 114, 258, 581, 665
BspANI GGCC 3 cut(s) 62, 319, 1061
BspCNI CTCAG 2 cut(s) 1028, 1429
BspFNI CGCG 1 cut(s) 155
BspLI GGNNCC 2 cut(s) 662, 1828
BspMAI CTGCAG 1 cut(s) 1673
BspMI ACCTGC 1 cut(s) 1750
BspPI GGATC 2 cut(s) 385, 778
BspQI GCTCTTC 1 cut(s) 1573
BspTNI GGTCTC 1 cut(s) 244
BsrDI GCAATG 3 cut(s) 919, 1009, 1773
BsrI ACTGG 3 cut(s) 91, 1371, 1552
BssECI CCNNGG 2 cut(s) 234, 373
BssMI GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
BssNAI GTATAC 2 cut(s) 249, 1170
BssNI GRCGYC 1 cut(s) 1093
BssT1I CCWWGG 1 cut(s) 234
Bst1107I GTATAC 2 cut(s) 249, 1170
Bst2UI CCWGG 2 cut(s) 59, 1240
Bst4CI ACNGT 7 cut(s) 433, 632, 804, 1046, 1234, 1299, 1537
Bst6I CTCTTC 1 cut(s) 1573
BstACI GRCGYC 1 cut(s) 1093
BstBAI YACGTR 2 cut(s) 225, 463
BstC8I GCNNGC 7 cut(s) 665, 669, 754, 1063, 1669, 1673, 1677
BstDEI CTNAG 5 cut(s) 252, 1015, 1277, 1437, 1779
BstDSI CCRYGG 1 cut(s) 234
BstEII GGTNACC 1 cut(s) 368
BstF5I GGATG 6 cut(s) 513, 580, 606, 880, 1198, 1754
BstFNI CGCG 1 cut(s) 155
BstKTI GATC 7 cut(s) 99, 393, 786, 1254, 1336, 1817, 1876
BstMAI GTCTC 4 cut(s) 173, 244, 1078, 1524
BstMBI GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
BstMWI GCNNNNNNNGC 3 cut(s) 1058, 1099, 1589
BstNI CCWGG 2 cut(s) 59, 1240
BstNSI RCATGY 1 cut(s) 1679
BstPI GGTNACC 1 cut(s) 368
BstSCI CCNGG 2 cut(s) 57, 1238
BstSFI CTRYAG 3 cut(s) 30, 1233, 1669
BstSLI GKGCMC 1 cut(s) 1024
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 2 cut(s) 604, 995
BstV2I GAAGAC 1 cut(s) 1905
BstX2I RGATCY 1 cut(s) 783
BstXI CCANNNNNNTGG 1 cut(s) 928
BstYI RGATCY 1 cut(s) 783
BstZ17I GTATAC 2 cut(s) 249, 1170
BsuRI GGCC 3 cut(s) 62, 319, 1061
BtgI CCRYGG 1 cut(s) 234
BtrI CACGTC 1 cut(s) 531
BtsCI GGATG 6 cut(s) 513, 580, 606, 880, 1198, 1754
BtsI GCAGTG 1 cut(s) 43
BtsIMutI CAGTG 9 cut(s) 43, 429, 839, 1051, 1230, 1295, 1457, 1533, 1848
BveI ACCTGC 1 cut(s) 1750
Cac8I GCNNGC 7 cut(s) 665, 669, 754, 1063, 1669, 1673, 1677
CaiI CAGNNNCTG 1 cut(s) 190
Cfr13I GGNCC 3 cut(s) 228, 318, 1701
CseI GACGC 2 cut(s) 144, 1082
Csp6I GTAC 5 cut(s) 13, 151, 334, 460, 1471
CspCI CAANNNNNGTGG 2 cut(s) 337, 372
CviQI GTAC 5 cut(s) 13, 151, 334, 460, 1471
DdeI CTNAG 5 cut(s) 252, 1015, 1277, 1437, 1779
DpnI GATC 7 cut(s) 98, 392, 785, 1253, 1335, 1816, 1875
DpnII GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
DraI TTTAAA 2 cut(s) 1056, 1756
DraIII CACNNNGTG 1 cut(s) 1539
DrdI GACNNNNNNGTC 1 cut(s) 1092
DseDI GACNNNNNNGTC 1 cut(s) 1092
Eam1104I CTCTTC 1 cut(s) 1573
EarI CTCTTC 1 cut(s) 1573
EciI GGCGGA 1 cut(s) 103
Eco130I CCWWGG 1 cut(s) 234
Eco147I AGGCCT 2 cut(s) 62, 1061
Eco24I GRGCYC 1 cut(s) 665
Eco31I GGTCTC 1 cut(s) 244
Eco32I GATATC 1 cut(s) 405
Eco47I GGWCC 2 cut(s) 228, 1701
Eco57I CTGAAG 1 cut(s) 691
Eco72I CACGTG 1 cut(s) 225
Eco91I GGTNACC 1 cut(s) 368
EcoO65I GGTNACC 1 cut(s) 368
EcoRI GAATTC 1 cut(s) 940
EcoRII CCWGG 2 cut(s) 57, 1238
EcoRV GATATC 1 cut(s) 405
EcoT14I CCWWGG 1 cut(s) 234
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 1 cut(s) 665
ErhI CCWWGG 1 cut(s) 234
Esp3I CGTCTC 1 cut(s) 173
FaqI GGGAC 1 cut(s) 1287
FauI CCCGC 2 cut(s) 251, 672
FauNDI CATATG 2 cut(s) 1808, 1912
FbaI TGATCA 2 cut(s) 96, 1251
FblI GTMKAC 2 cut(s) 248, 1169
Fnu4HI GCNGC 3 cut(s) 49, 618, 984
FokI GGATG 6 cut(s) 520, 587, 613, 887, 1205, 1761
FriOI GRGCYC 1 cut(s) 665
Fsp4HI GCNGC 3 cut(s) 49, 618, 984
FspBI CTAG 3 cut(s) 408, 1652, 1856
GluI GCNGC 3 cut(s) 49, 618, 984
GsaI CCCAGC 1 cut(s) 417
GsuI CTGGAG 1 cut(s) 1354
HaeIII GGCC 3 cut(s) 62, 319, 1061
HapII CCGG 1 cut(s) 807
HgaI GACGC 2 cut(s) 144, 1082
Hin1I GRCGYC 1 cut(s) 1093
HinfI GANTC 6 cut(s) 54, 815, 1031, 1433, 1514, 1619
HpaII CCGG 1 cut(s) 807
HphI GGTGA 7 cut(s) 31, 281, 380, 400, 494, 1108, 1884
Hpy166II GTNNAC 4 cut(s) 228, 249, 1022, 1170
Hpy188I TCNGA 6 cut(s) 141, 377, 600, 820, 1359, 1438
Hpy188III TCNNGA 3 cut(s) 954, 1984, 2031
Hpy8I GTNNAC 4 cut(s) 228, 249, 1022, 1170
Hpy99I CGWCG 5 cut(s) 179, 200, 529, 532, 600
HpyAV CCTTC 6 cut(s) 73, 695, 872, 1889, 1914, 2000
HpyCH4III ACNGT 7 cut(s) 433, 632, 804, 1046, 1234, 1299, 1537
HpyCH4IV ACGT 3 cut(s) 224, 462, 530
HpyF10VI GCNNNNNNNGC 3 cut(s) 1058, 1099, 1589
HpyF3I CTNAG 5 cut(s) 252, 1015, 1277, 1437, 1779
HpySE526I ACGT 3 cut(s) 224, 462, 530
Hsp92I GRCGYC 1 cut(s) 1093
Ksp22I TGATCA 2 cut(s) 96, 1251
Kzo9I GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
LguI GCTCTTC 1 cut(s) 1573
LmnI GCTCC 3 cut(s) 660, 1373, 1826
Lsp1109I GCAGC 2 cut(s) 604, 995
LweI GCATC 6 cut(s) 169, 475, 629, 681, 1074, 1183
MaeI CTAG 3 cut(s) 408, 1652, 1856
MaeII ACGT 3 cut(s) 224, 462, 530
MaeIII GTNAC 5 cut(s) 220, 368, 1114, 1450, 1915
MalI GATC 7 cut(s) 98, 392, 785, 1253, 1335, 1816, 1875
MboI GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
MboII GAAGA 2 cut(s) 1590, 1910
MfeI CAATTG 1 cut(s) 869
MflI RGATCY 1 cut(s) 783
MhlI GDGCHC 3 cut(s) 348, 665, 1024
MluI ACGCGT 1 cut(s) 153
MlyI GAGTC 2 cut(s) 63, 824
MmeI TCCRAC 7 cut(s) 156, 492, 578, 654, 1113, 1126, 1523
Mph1103I ATGCAT 1 cut(s) 1198
MroXI GAANNNNTTC 1 cut(s) 191
MslI CAYNNNNRTG 3 cut(s) 792, 978, 1913
MspA1I CMGCKG 1 cut(s) 1979
MspI CCGG 1 cut(s) 807
MspR9I CCNGG 2 cut(s) 59, 1240
MunI CAATTG 1 cut(s) 869
Mva1269I GAATGC 2 cut(s) 619, 1152
MvaI CCWGG 2 cut(s) 59, 1240
MvnI CGCG 1 cut(s) 155
MwoI GCNNNNNNNGC 3 cut(s) 1058, 1099, 1589
NcoI CCATGG 1 cut(s) 234
NdeI CATATG 2 cut(s) 1808, 1912
NdeII GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
NlaIV GGNNCC 2 cut(s) 662, 1828
NmeAIII GCCGAG 2 cut(s) 77, 84
NmuCI GTSAC 5 cut(s) 220, 368, 1114, 1450, 1915
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 1 cut(s) 1679
OliI CACNNNNGTG 1 cut(s) 1913
PaeI GCATGC 1 cut(s) 1679
PceI AGGCCT 2 cut(s) 62, 1061
PciSI GCTCTTC 1 cut(s) 1573
PcsI WCGNNNNNNNCGW 1 cut(s) 536
PctI GAATGC 2 cut(s) 619, 1152
PdmI GAANNNNTTC 1 cut(s) 191
PfeI GAWTC 4 cut(s) 1031, 1433, 1514, 1619
PkrI GCNGC 3 cut(s) 50, 619, 985
PleI GAGTC 2 cut(s) 62, 823
PmaCI CACGTG 1 cut(s) 225
PmlI CACGTG 1 cut(s) 225
PpsI GAGTC 2 cut(s) 62, 823
Ppu21I YACGTR 2 cut(s) 225, 463
PshBI ATTAAT 1 cut(s) 966
Psp6I CCWGG 2 cut(s) 57, 1238
PspCI CACGTG 1 cut(s) 225
PspEI GGTNACC 1 cut(s) 368
PspFI CCCAGC 1 cut(s) 413
PspGI CCWGG 2 cut(s) 57, 1238
PspN4I GGNNCC 2 cut(s) 662, 1828
PspPI GGNCC 3 cut(s) 228, 318, 1701
PstI CTGCAG 1 cut(s) 1673
PstNI CAGNNNCTG 1 cut(s) 190
PsuI RGATCY 1 cut(s) 783
PvuII CAGCTG 1 cut(s) 1979
RsaI GTAC 5 cut(s) 14, 152, 335, 461, 1472
RsaNI GTAC 5 cut(s) 13, 151, 334, 460, 1471
RseI CAYNNNNRTG 3 cut(s) 792, 978, 1913
SapI GCTCTTC 1 cut(s) 1573
SatI GCNGC 3 cut(s) 49, 618, 984
Sau3AI GATC 7 cut(s) 96, 390, 783, 1251, 1333, 1814, 1873
Sau96I GGNCC 3 cut(s) 228, 318, 1701
SbfI CCTGCAGG 1 cut(s) 1673
SchI GAGTC 2 cut(s) 63, 824
ScrFI CCNGG 2 cut(s) 59, 1240
SdaI CCTGCAGG 1 cut(s) 1673
SduI GDGCHC 3 cut(s) 348, 665, 1024
SfaNI GCATC 6 cut(s) 169, 475, 629, 681, 1074, 1183
SfcI CTRYAG 3 cut(s) 30, 1233, 1669
SinI GGWCC 2 cut(s) 228, 1701
SmiMI CAYNNNNRTG 3 cut(s) 792, 978, 1913
SmlI CTYRAG 3 cut(s) 347, 904, 1081
SmoI CTYRAG 3 cut(s) 347, 904, 1081
SpeI ACTAGT 1 cut(s) 1855
SphI GCATGC 1 cut(s) 1679
Sse8387I CCTGCAGG 1 cut(s) 1673
SseBI AGGCCT 2 cut(s) 62, 1061
SsiI CCGC 6 cut(s) 22, 49, 114, 258, 581, 665
SspMI CTAG 3 cut(s) 408, 1652, 1856
StuI AGGCCT 2 cut(s) 62, 1061
StyD4I CCNGG 2 cut(s) 57, 1238
StyI CCWWGG 1 cut(s) 234
TaaI ACNGT 7 cut(s) 433, 632, 804, 1046, 1234, 1299, 1537
TaiI ACGT 3 cut(s) 227, 465, 533
TaqI TCGA 3 cut(s) 174, 195, 524
TatI WGTACW 3 cut(s) 12, 333, 1470
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 4 cut(s) 1031, 1433, 1514, 1619
TscAI CASTG 9 cut(s) 50, 436, 846, 1051, 1237, 1302, 1464, 1540, 1855
TseFI GTSAC 5 cut(s) 220, 368, 1114, 1450, 1915
TseI GCWGC 2 cut(s) 617, 983
Tsp45I GTSAC 5 cut(s) 220, 368, 1114, 1450, 1915
TspRI CASTG 9 cut(s) 50, 436, 846, 1051, 1237, 1302, 1464, 1540, 1855
VneI GTGCAC 1 cut(s) 1020
VpaK11BI GGWCC 2 cut(s) 228, 1701
VspI ATTAAT 1 cut(s) 966
XapI RAATTY 3 cut(s) 677, 859, 940
XceI RCATGY 1 cut(s) 1679
XmiI GTMKAC 2 cut(s) 248, 1169
XmnI GAANNNNTTC 1 cut(s) 191
XspI CTAG 3 cut(s) 408, 1652, 1856
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.