BRCA1-A complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0398161 |
| rosa_multiflora | Rmu_sc0001648.1_g000015 Rmu_sc0007363.1_g000001 Rmu_sc0033997.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00217570 |
| rosa_samantha | Rh2CG310100 Rh2DG349500 Rh6BG254800 |
| rosa_wichuraiana | Rw7G033100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 125 |
| AgsI | TTSAA | 2 cut(s) | 26, 38 |
| AluBI | AGCT | 1 cut(s) | 128 |
| AluI | AGCT | 1 cut(s) | 128 |
| Alw26I | GTCTC | 1 cut(s) | 23 |
| AlwI | GGATC | 1 cut(s) | 125 |
| AspLEI | GCGC | 1 cut(s) | 84 |
| BbsI | GAAGAC | 1 cut(s) | 121 |
| BceAI | ACGGC | 1 cut(s) | 86 |
| BcoDI | GTCTC | 1 cut(s) | 23 |
| BfoI | RGCGCY | 1 cut(s) | 85 |
| BpiI | GAAGAC | 1 cut(s) | 121 |
| BsaWI | WCCGGW | 1 cut(s) | 133 |
| Bse1I | ACTGG | 1 cut(s) | 119 |
| BseMII | CTCAG | 1 cut(s) | 132 |
| BseNI | ACTGG | 1 cut(s) | 119 |
| BsiSI | CCGG | 1 cut(s) | 134 |
| BsmAI | GTCTC | 1 cut(s) | 23 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspCNI | CTCAG | 1 cut(s) | 133 |
| BspPI | GGATC | 1 cut(s) | 125 |
| BsrI | ACTGG | 1 cut(s) | 119 |
| BssMI | GATC | 1 cut(s) | 130 |
| Bst6I | CTCTTC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 1 cut(s) | 141 |
| BstH2I | RGCGCY | 1 cut(s) | 85 |
| BstHHI | GCGC | 1 cut(s) | 84 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMAI | GTCTC | 1 cut(s) | 23 |
| BstMBI | GATC | 1 cut(s) | 130 |
| BstV2I | GAAGAC | 1 cut(s) | 121 |
| BtsIMutI | CAGTG | 1 cut(s) | 126 |
| CfoI | GCGC | 1 cut(s) | 84 |
| CviJI | RGCY | 3 cut(s) | 5, 101, 128 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 101, 128 |
| DdeI | CTNAG | 1 cut(s) | 141 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 1 cut(s) | 21 |
| FaiI | YATR | 2 cut(s) | 192, 203 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 18, 50 |
| GlaI | GCGC | 1 cut(s) | 83 |
| HaeII | RGCGCY | 1 cut(s) | 85 |
| HapII | CCGG | 1 cut(s) | 134 |
| HhaI | GCGC | 1 cut(s) | 84 |
| Hin6I | GCGC | 1 cut(s) | 82 |
| HinP1I | GCGC | 1 cut(s) | 82 |
| HinfI | GANTC | 1 cut(s) | 31 |
| HpaII | CCGG | 1 cut(s) | 134 |
| Hpy188III | TCNNGA | 2 cut(s) | 23, 35 |
| HpyAV | CCTTC | 2 cut(s) | 72, 160 |
| HpyF3I | CTNAG | 1 cut(s) | 141 |
| HspAI | GCGC | 1 cut(s) | 82 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LpnPI | CCDG | 7 cut(s) | 29, 132, 147, 158, 183, 194, 195 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 2 cut(s) | 38, 126 |
| MluCI | AATT | 2 cut(s) | 66, 214 |
| MlyI | GAGTC | 1 cut(s) | 25 |
| MnlI | CCTC | 3 cut(s) | 30, 46, 85 |
| MseI | TTAA | 1 cut(s) | 65 |
| MspI | CCGG | 1 cut(s) | 134 |
| NdeII | GATC | 1 cut(s) | 130 |
| PleI | GAGTC | 1 cut(s) | 25 |
| PpsI | GAGTC | 1 cut(s) | 25 |
| SaqAI | TTAA | 1 cut(s) | 65 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| SchI | GAGTC | 1 cut(s) | 25 |
| SetI | ASST | 3 cut(s) | 48, 130, 190 |
| SgeI | CNNG | 9 cut(s) | 35, 47, 56, 131, 146, 185, 193, 197, 210 |
| Sse9I | AATT | 2 cut(s) | 66, 214 |
| TasI | AATT | 2 cut(s) | 66, 214 |
| Tru1I | TTAA | 1 cut(s) | 65 |
| Tru9I | TTAA | 1 cut(s) | 65 |
| TscAI | CASTG | 1 cut(s) | 126 |
| TspDTI | ATGAA | 1 cut(s) | 148 |
| TspRI | CASTG | 1 cut(s) | 126 |