Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0013060

Physical Location & Seq

Genomic Coordinates Forward (+)

58143148 .. 58145063

Gene Structure 1916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G038230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGGTTACTTCTCTTGCAATGCCGAGTCCGCCACCGCGATTTGCGACTCCGATAACTTTGACCTCAAGAGAAAACCCAATAATAAGCCCATCGAGATCAGGGAGTTCCCCTACGACGACCTCGTCGCCGCCACGAATGGGTTCTCAGCTGATAGCTTTTTGGGTAAAGGAAGCCACGGAAGCGTGTACAAGGCTATTCTCGACGACGGGAAGCTCGTCGCAGCGGTTAAGAGGATGAAATACCCGAAGCAAACGACGTCGTTGGCGAGGCATAGCTGCACCACGTGCGTCGCGGCGGAGAACGAGATCGAGATTCTTTCCCGGGTACGACACCCCAGGCTCGTGAATCTCATCGGGTTCTGCCCGGACTCAAACGACGGGAAATTGATTGTCGTCGAGTACATGCCCAACGGCACGCTGCACGACTTGTTGCACTCGCGGCCCAGACCGCCCGGGTGGACCCGAAGAGTGCGGCTGATCTTACACGTGGCCAAGGCGGTCCAGGCGCTACACTCTTCCAACCCGCCGGTGATCCATAGGGATATAAAGTCGTCGAACGTTTTGATCGACGGGGATTGGACCGCCAGGCTCGGGGACTTGGGGCTGGCTTTGAGGGGACACGTGGAGGACGTTCGCGTGAGGTGTACGCCACCGGCGGGGACGTTAGGGTACCTCGACCCGGGCTATCTTGCGCCGGGGGATCTCAGCGCCAAGAGTGACGTCTTCAGCTTCGGGATTTTGCTCTTGGAAATCGTGAGCGGAAGAAACGCCATTGATGTAAACTACAGTCCTCCTTCGGTGATTGACTGGGCCCTGCCGATCATAAAGCACGGCGAGTACGCCGCCATATGCGACCGGAGAATCGGCCCGCCGGCCGACTCCGCAGTGATTCGCCAGCTGGCGGTGTTGGCCGCCAGGTGCGTGAGGTCGACGGCGGAGAAGCGACCGTCGATGGCGGAGGTGGTCGAGTGTTTAAAAGTTGTGAATGAGAGAGTTCACGCGCCGATATGGAACAGCCTGAAGCGGCGCGTGAGGCGCGTGGAAGAGGAGGAGCATCGACCGTCGTTTGTTGATGGAGGTGGTCATGATTTGGAGGAGGTGGTACGGAGCACGAGAGGGAGTAGGAGGAAGTTGAACAGGAAGGTATCGAGTGTGTTGGGCGCAGAGTACGAGGGTGAGGACGAGGCGATGATTGGAGAGCGGGTGCTGAGGTCAAGGTCGATTGGGTCGGTCAACGAGATTAAAGCGGGGAGTGGCGGTGGAGTGCGGAAGGGTGTAGGGGTTGCGGTGAAGGTGAGGCTGAGCAAGTCGAGGTCAGTTGGGGCAGTATTGGGTAGTCCGAAGATTGTGCGTCGGAACAAAAGGGGGTTTTTGATTGAGTCGGTGAGATTGGACATGTCTAAATTGGTCATTAGTTTGGACGGTGAGAGATCTGATAGGAAAATGCTCGAGAAACCTCTGGTTTCTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

490

Amino Acids

53.76

Weight (kDa)

9.49

Isoelectric Point (pI)

53.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	51 - 323	9e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	52 - 325	1.7e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013060)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28390 AT1G28390
fragaria_vesca	FvH4_5g35880
malus_domestica	MD08G1192400.v1.1 MD15G1381000.v1.1
prunus_persica	Prupe.1G527200_v2.0.a1
pyrus_communis	pycom08g16610 pycom15g34150
rosa_chinensis	RchiOBHm_Chr7g0237591
rosa_laevigata	RLG00000000986
rosa_multiflora	Rmu_sc0007860.1_g000005
rosa_roxburghii	Rroxscaffold_3G00223960
rosa_rugosa	Rorug07G0305600
rosa_samantha	Rh7AG461900 Rh7BG432200 Rh7CG479000 Rh7DG448200
rosa_wichuraiana	Rw7G038230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	122
AatII	GACGTC	2 cut(s)	260, 723
Acc65I	GGTACC	1 cut(s)	669
AccB1I	GGYRCC	1 cut(s)	669
AccBSI	CCGCTC	2 cut(s)	759, 1201
AccI	GTMKAC	1 cut(s)	929
AccII	CGCG	7 cut(s)	38, 293, 439, 636, 1001, 1029, 1038
AclI	AACGTT	1 cut(s)	558
AclWI	GGATC	2 cut(s)	526, 708
AcoI	YGGCCR	3 cut(s)	489, 873, 909
AcuI	CTGAAG	2 cut(s)	709, 1040
AcvI	CACGTG	3 cut(s)	285, 487, 622
AcyI	GRCGYC	2 cut(s)	257, 720
AdeI	CACNNNGTG	1 cut(s)	285
AfaI	GTAC	8 cut(s)	188, 327, 401, 646, 671, 839, 1104, 1169
AfiI	CCNNNNNNNGG	5 cut(s)	138, 591, 656, 679, 901
AflIII	ACRYGT	3 cut(s)	484, 619, 1395
AgsI	TTSAA	1 cut(s)	1135
AjnI	CCWGG	4 cut(s)	335, 501, 584, 914
AluBI	AGCT	6 cut(s)	149, 156, 214, 276, 729, 898
AluI	AGCT	6 cut(s)	149, 156, 214, 276, 729, 898
Alw21I	GWGCWC	1 cut(s)	1112
AlwI	GGATC	2 cut(s)	526, 708
Ama87I	CYCGRG	5 cut(s)	321, 452, 590, 679, 1448
AoxI	GGCC	6 cut(s)	440, 489, 810, 865, 873, 909
ApaI	GGGCCC	1 cut(s)	814
ApeKI	GCWGC	3 cut(s)	221, 276, 418
Asp700I	GAANNNNTTC	1 cut(s)	140
Asp718I	GGTACC	1 cut(s)	669
AspLEI	GCGC	7 cut(s)	508, 694, 710, 1003, 1029, 1038, 1163
AspS9I	GGNCC	7 cut(s)	441, 459, 499, 579, 810, 811, 866
AsuC2I	CCSGG	8 cut(s)	322, 323, 365, 453, 454, 680, 681, 696
AsuHPI	GGTGA	7 cut(s)	541, 811, 1187, 1300, 1306, 1396, 1436
AvaI	CYCGRG	5 cut(s)	321, 452, 590, 679, 1448
AvaII	GGWCC	3 cut(s)	459, 499, 579
BaeGI	GKGCMC	1 cut(s)	814
BalI	TGGCCA	1 cut(s)	491
BanI	GGYRCC	1 cut(s)	669
BanII	GRGCYC	1 cut(s)	814
BauI	CACGAG	2 cut(s)	341, 1111
BbrPI	CACGTG	3 cut(s)	285, 487, 622
BbsI	GAAGAC	1 cut(s)	715
Bbv12I	GWGCWC	1 cut(s)	1112
BbvCI	CCTCAGC	1 cut(s)	1208
BbvI	GCAGC	3 cut(s)	233, 263, 405
BccI	CCATC	3 cut(s)	98, 946, 1067
BceAI	ACGGC	3 cut(s)	427, 847, 948
BcgI	CGANNNNNNTGC	2 cut(s)	1330, 1364
BciT130I	CCWGG	4 cut(s)	337, 503, 586, 916
BcnI	CCSGG	8 cut(s)	322, 323, 365, 453, 454, 680, 681, 696
BfmI	CTRYAG	1 cut(s)	784
BfoI	RGCGCY	2 cut(s)	509, 711
BglII	AGATCT	1 cut(s)	1430
BlpI	GCTNAGC	1 cut(s)	1301
Bme18I	GGWCC	3 cut(s)	459, 499, 579
BmeT110I	CYCGRG	5 cut(s)	321, 452, 590, 679, 1448
BmgT120I	GGNCC	7 cut(s)	441, 459, 499, 579, 810, 811, 866
BmiI	GGNNCC	3 cut(s)	461, 671, 812
BmrI	ACTGGG	1 cut(s)	817
BmsI	GCATC	1 cut(s)	1063
BmuI	ACTGGG	1 cut(s)	817
BpiI	GAAGAC	1 cut(s)	715
Bpu10I	CCTNAGC	1 cut(s)	1208
Bpu1102I	GCTNAGC	1 cut(s)	1301
BpuEI	CTTGAG	1 cut(s)	50
BpuMI	CCSGG	8 cut(s)	322, 323, 365, 453, 454, 680, 681, 696
BsaAI	YACGTR	3 cut(s)	285, 487, 622
BsaHI	GRCGYC	2 cut(s)	257, 720
BsaJI	CCNNGG	7 cut(s)	175, 321, 335, 452, 492, 679, 695
BsaWI	WCCGGW	1 cut(s)	855
BsaXI	ACNNNNNCTCC	4 cut(s)	1188, 1218, 1243, 1273
Bsc4I	CCNNNNNNNGG	5 cut(s)	138, 591, 656, 679, 901
Bse118I	RCCGGY	3 cut(s)	526, 652, 871
Bse1I	ACTGG	1 cut(s)	812
Bse3DI	GCAATG	1 cut(s)	25
BseBI	CCWGG	4 cut(s)	337, 503, 586, 916
BseDI	CCNNGG	7 cut(s)	175, 321, 335, 452, 492, 679, 695
BseGI	GGATG	1 cut(s)	240
BseLI	CCNNNNNNNGG	5 cut(s)	138, 591, 656, 679, 901
BseMI	GCAATG	1 cut(s)	25
BseMII	CTCAG	4 cut(s)	159, 718, 1199, 1292
BseNI	ACTGG	1 cut(s)	812
BseRI	GAGGAG	3 cut(s)	1061, 1064, 1109
BseSI	GKGCMC	1 cut(s)	814
BseX3I	CGGCCG	1 cut(s)	873
BseXI	GCAGC	3 cut(s)	233, 263, 405
BsgI	GTGCAG	2 cut(s)	262, 404
Bsh1236I	CGCG	7 cut(s)	38, 293, 439, 636, 1001, 1029, 1038
Bsh1285I	CGRYCG	4 cut(s)	856, 876, 947, 1061
BshFI	GGCC	6 cut(s)	442, 491, 812, 867, 875, 911
BshNI	GGYRCC	1 cut(s)	669
BsiEI	CGRYCG	4 cut(s)	856, 876, 947, 1061
BsiHKAI	GWGCWC	1 cut(s)	1112
BsiHKCI	CYCGRG	5 cut(s)	321, 452, 590, 679, 1448
BsiSI	CCGG	9 cut(s)	322, 365, 453, 527, 653, 680, 695, 856, 872
BslFI	GGGAC	3 cut(s)	608, 630, 673
BslI	CCNNNNNNNGG	5 cut(s)	138, 591, 656, 679, 901
BsmFI	GGGAC	3 cut(s)	608, 630, 673
BsnI	GGCC	6 cut(s)	442, 491, 812, 867, 875, 911
BsoBI	CYCGRG	5 cut(s)	321, 452, 590, 679, 1448
Bsp120I	GGGCCC	1 cut(s)	810
Bsp1286I	GDGCHC	2 cut(s)	814, 1112
Bsp1407I	TGTACA	1 cut(s)	186
Bsp143I	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
Bsp1720I	GCTNAGC	1 cut(s)	1301
BspANI	GGCC	6 cut(s)	442, 491, 812, 867, 875, 911
BspCNI	CTCAG	4 cut(s)	158, 717, 1200, 1293
BspFNI	CGCG	7 cut(s)	38, 293, 439, 636, 1001, 1029, 1038
BspHI	TCATGA	1 cut(s)	1084
BspLI	GGNNCC	3 cut(s)	461, 671, 812
BspPI	GGATC	2 cut(s)	526, 708
BspT107I	GGYRCC	1 cut(s)	669
BsrBI	CCGCTC	2 cut(s)	759, 1201
BsrDI	GCAATG	1 cut(s)	25
BsrFI	RCCGGY	3 cut(s)	526, 652, 871
BsrGI	TGTACA	1 cut(s)	186
BsrI	ACTGG	1 cut(s)	812
BssAI	RCCGGY	3 cut(s)	526, 652, 871
BssECI	CCNNGG	7 cut(s)	175, 321, 335, 452, 492, 679, 695
BssMI	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
BssNI	GRCGYC	2 cut(s)	257, 720
BssSI	CACGAG	2 cut(s)	341, 1111
BssT1I	CCWWGG	1 cut(s)	492
Bst2BI	CACGAG	2 cut(s)	341, 1111
Bst2UI	CCWGG	4 cut(s)	337, 503, 586, 916
Bst4CI	ACNGT	4 cut(s)	788, 948, 1062, 1424
Bst6I	CTCTTC	3 cut(s)	460, 520, 1038
BstACI	GRCGYC	2 cut(s)	257, 720
BstAPI	GCANNNNNTGC	1 cut(s)	285
BstAUI	TGTACA	1 cut(s)	186
BstBAI	YACGTR	3 cut(s)	285, 487, 622
BstC8I	GCNNGC	6 cut(s)	416, 606, 869, 873, 896, 900
BstDEI	CTNAG	4 cut(s)	145, 704, 1208, 1301
BstDSI	CCRYGG	1 cut(s)	175
BstF5I	GGATG	1 cut(s)	240
BstFNI	CGCG	7 cut(s)	38, 293, 439, 636, 1001, 1029, 1038
BstH2I	RGCGCY	2 cut(s)	509, 711
BstHHI	GCGC	7 cut(s)	508, 694, 710, 1003, 1029, 1038, 1163
BstKTI	GATC	8 cut(s)	99, 309, 480, 534, 567, 703, 822, 1433
BstMBI	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
BstMCI	CGRYCG	4 cut(s)	856, 876, 947, 1061
BstNI	CCWGG	4 cut(s)	337, 503, 586, 916
BstNSI	RCATGY	2 cut(s)	406, 1399
BstSFI	CTRYAG	1 cut(s)	784
BstSLI	GKGCMC	1 cut(s)	814
BstUI	CGCG	7 cut(s)	38, 293, 439, 636, 1001, 1029, 1038
BstV1I	GCAGC	3 cut(s)	233, 263, 405
BstV2I	GAAGAC	1 cut(s)	715
BstX2I	RGATCY	2 cut(s)	700, 1430
BstYI	RGATCY	2 cut(s)	700, 1430
BstZI	CGGCCG	1 cut(s)	873
BsuRI	GGCC	6 cut(s)	442, 491, 812, 867, 875, 911
BtgI	CCRYGG	1 cut(s)	175
BtgZI	GCGATG	1 cut(s)	1202
BtsCI	GGATG	1 cut(s)	240
BtsI	GCAGTG	1 cut(s)	891
BtsIMutI	CAGTG	1 cut(s)	891
Cac8I	GCNNGC	6 cut(s)	416, 606, 869, 873, 896, 900
CciI	TCATGA	1 cut(s)	1084
CfoI	GCGC	7 cut(s)	508, 694, 710, 1003, 1029, 1038, 1163
Cfr10I	RCCGGY	3 cut(s)	526, 652, 871
Cfr13I	GGNCC	7 cut(s)	441, 459, 499, 579, 810, 811, 866
Cfr9I	CCCGGG	3 cut(s)	321, 452, 679
CseI	GACGC	2 cut(s)	277, 1340
Csp6I	GTAC	8 cut(s)	187, 326, 400, 645, 670, 838, 1103, 1168
CviAII	CATG	3 cut(s)	403, 1085, 1396
CviQI	GTAC	8 cut(s)	187, 326, 400, 645, 670, 838, 1103, 1168
DdeI	CTNAG	4 cut(s)	145, 704, 1208, 1301
DpnI	GATC	8 cut(s)	98, 308, 479, 533, 566, 702, 821, 1432
DpnII	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
DraI	TTTAAA	1 cut(s)	975
DraIII	CACNNNGTG	1 cut(s)	285
DrdI	GACNNNNNNGTC	1 cut(s)	122
DseDI	GACNNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	3 cut(s)	489, 873, 909
EagI	CGGCCG	1 cut(s)	873
Eam1104I	CTCTTC	3 cut(s)	460, 520, 1038
EarI	CTCTTC	3 cut(s)	460, 520, 1038
EciI	GGCGGA	4 cut(s)	19, 311, 950, 971
EclXI	CGGCCG	1 cut(s)	873
Eco130I	CCWWGG	1 cut(s)	492
Eco24I	GRGCYC	1 cut(s)	814
Eco47I	GGWCC	3 cut(s)	459, 499, 579
Eco52I	CGGCCG	1 cut(s)	873
Eco57I	CTGAAG	2 cut(s)	709, 1040
Eco72I	CACGTG	3 cut(s)	285, 487, 622
Eco88I	CYCGRG	5 cut(s)	321, 452, 590, 679, 1448
EcoO109I	RGGNCCY	1 cut(s)	811
EcoRII	CCWGG	4 cut(s)	335, 501, 584, 914
EcoT14I	CCWWGG	1 cut(s)	492
EcoT38I	GRGCYC	1 cut(s)	814
ErhI	CCWWGG	1 cut(s)	492
FaeI	CATG	3 cut(s)	406, 1088, 1399
FaqI	GGGAC	3 cut(s)	608, 630, 673
FatI	CATG	3 cut(s)	402, 1084, 1395
FauI	CCCGC	5 cut(s)	531, 649, 876, 1194, 1240
FauNDI	CATATG	1 cut(s)	848
FblI	GTMKAC	1 cut(s)	929
FokI	GGATG	1 cut(s)	247
FriOI	GRGCYC	1 cut(s)	814
GlaI	GCGC	7 cut(s)	507, 693, 709, 1002, 1028, 1037, 1162
HaeII	RGCGCY	2 cut(s)	509, 711
HaeIII	GGCC	6 cut(s)	442, 491, 812, 867, 875, 911
HapII	CCGG	9 cut(s)	322, 365, 453, 527, 653, 680, 695, 856, 872
HgaI	GACGC	2 cut(s)	277, 1340
HhaI	GCGC	7 cut(s)	508, 694, 710, 1003, 1029, 1038, 1163
Hin1I	GRCGYC	2 cut(s)	257, 720
Hin1II	CATG	3 cut(s)	406, 1088, 1399
Hin6I	GCGC	7 cut(s)	506, 692, 708, 1001, 1027, 1036, 1161
HinP1I	GCGC	7 cut(s)	506, 692, 708, 1001, 1027, 1036, 1161
HincII	GTYRAC	2 cut(s)	930, 1234
HindII	GTYRAC	2 cut(s)	930, 1234
HinfI	GANTC	9 cut(s)	26, 47, 313, 346, 368, 861, 878, 889, 1379
HpaII	CCGG	9 cut(s)	322, 365, 453, 527, 653, 680, 695, 856, 872
HphI	GGTGA	7 cut(s)	541, 811, 1187, 1300, 1306, 1396, 1436
Hpy166II	GTNNAC	7 cut(s)	187, 459, 645, 781, 930, 997, 1234
Hpy188I	TCNGA	4 cut(s)	52, 1341, 1356, 1435
Hpy188III	TCNNGA	9 cut(s)	67, 94, 200, 310, 343, 733, 754, 1085, 1450
Hpy8I	GTNNAC	7 cut(s)	187, 459, 645, 781, 930, 997, 1234
HpyAV	CCTTC	4 cut(s)	804, 1135, 1264, 1285
HpyCH4III	ACNGT	4 cut(s)	788, 948, 1062, 1424
HpyCH4IV	ACGT	8 cut(s)	257, 284, 486, 558, 621, 630, 662, 720
HpyCH4V	TGCA	4 cut(s)	18, 279, 421, 433
HpyF3I	CTNAG	4 cut(s)	145, 704, 1208, 1301
HpySE526I	ACGT	8 cut(s)	257, 284, 486, 558, 621, 630, 662, 720
Hsp92I	GRCGYC	2 cut(s)	257, 720
Hsp92II	CATG	3 cut(s)	406, 1088, 1399
HspAI	GCGC	7 cut(s)	506, 692, 708, 1001, 1027, 1036, 1161
KpnI	GGTACC	1 cut(s)	673
KroI	GCCGGC	1 cut(s)	871
KroNI	GCCGGC	1 cut(s)	873
Kzo9I	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
LmnI	GCTCC	2 cut(s)	1051, 1107
Lsp1109I	GCAGC	3 cut(s)	233, 263, 405
LweI	GCATC	1 cut(s)	1063
MaeII	ACGT	8 cut(s)	257, 284, 486, 558, 621, 630, 662, 720
MaeIII	GTNAC	2 cut(s)	5, 716
MalI	GATC	8 cut(s)	98, 308, 479, 533, 566, 702, 821, 1432
MbiI	CCGCTC	2 cut(s)	759, 1201
MboI	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
MboII	GAAGA	6 cut(s)	477, 507, 715, 774, 1055, 1354
MflI	RGATCY	2 cut(s)	700, 1430
MhlI	GDGCHC	2 cut(s)	814, 1112
MlsI	TGGCCA	1 cut(s)	491
MluCI	AATT	2 cut(s)	383, 1403
MluNI	TGGCCA	1 cut(s)	491
MlyI	GAGTC	5 cut(s)	35, 41, 362, 872, 1388
MmeI	TCCRAC	2 cut(s)	543, 1334
Mox20I	TGGCCA	1 cut(s)	491
MroNI	GCCGGC	1 cut(s)	871
MroXI	GAANNNNTTC	1 cut(s)	140
MscI	TGGCCA	1 cut(s)	491
MseI	TTAA	3 cut(s)	228, 974, 1242
Msp20I	TGGCCA	1 cut(s)	491
MspA1I	CMGCKG	3 cut(s)	149, 224, 898
MspI	CCGG	9 cut(s)	322, 365, 453, 527, 653, 680, 695, 856, 872
MvaI	CCWGG	4 cut(s)	337, 503, 586, 916
MvnI	CGCG	7 cut(s)	38, 293, 439, 636, 1001, 1029, 1038
NaeI	GCCGGC	1 cut(s)	873
NciI	CCSGG	8 cut(s)	322, 323, 365, 453, 454, 680, 681, 696
NdeI	CATATG	1 cut(s)	848
NdeII	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
NgoMIV	GCCGGC	1 cut(s)	871
NlaIII	CATG	3 cut(s)	406, 1088, 1399
NlaIV	GGNNCC	3 cut(s)	461, 671, 812
NmeAIII	GCCGAG	1 cut(s)	49
NmuCI	GTSAC	1 cut(s)	716
NspI	RCATGY	2 cut(s)	406, 1399
PaeR7I	CTCGAG	1 cut(s)	1448
PagI	TCATGA	1 cut(s)	1084
PciI	ACATGT	1 cut(s)	1395
PcsI	WCGNNNNNNNCGW	5 cut(s)	120, 213, 263, 564, 627
PdiI	GCCGGC	1 cut(s)	873
PdmI	GAANNNNTTC	1 cut(s)	140
PfeI	GAWTC	4 cut(s)	313, 346, 861, 889
PflFI	GACNNNGTC	1 cut(s)	122
PleI	GAGTC	5 cut(s)	34, 41, 362, 872, 1387
PmaCI	CACGTG	3 cut(s)	285, 487, 622
PmlI	CACGTG	3 cut(s)	285, 487, 622
PpsI	GAGTC	5 cut(s)	34, 41, 362, 872, 1387
Ppu21I	YACGTR	3 cut(s)	285, 487, 622
PscI	ACATGT	1 cut(s)	1395
Psp1406I	AACGTT	1 cut(s)	558
Psp6I	CCWGG	4 cut(s)	335, 501, 584, 914
PspCI	CACGTG	3 cut(s)	285, 487, 622
PspGI	CCWGG	4 cut(s)	335, 501, 584, 914
PspN4I	GGNNCC	3 cut(s)	461, 671, 812
PspOMI	GGGCCC	1 cut(s)	810
PspPI	GGNCC	7 cut(s)	441, 459, 499, 579, 810, 811, 866
PsuI	RGATCY	2 cut(s)	700, 1430
PsyI	GACNNNGTC	1 cut(s)	122
PvuII	CAGCTG	2 cut(s)	149, 898
RsaI	GTAC	8 cut(s)	188, 327, 401, 646, 671, 839, 1104, 1169
RsaNI	GTAC	8 cut(s)	187, 326, 400, 645, 670, 838, 1103, 1168
SalI	GTCGAC	1 cut(s)	928
SaqAI	TTAA	3 cut(s)	228, 974, 1242
Sau3AI	GATC	8 cut(s)	96, 306, 477, 531, 564, 700, 819, 1430
Sau96I	GGNCC	7 cut(s)	441, 459, 499, 579, 810, 811, 866
SchI	GAGTC	5 cut(s)	35, 41, 362, 872, 1388
SduI	GDGCHC	2 cut(s)	814, 1112
SfaNI	GCATC	1 cut(s)	1063
SfcI	CTRYAG	1 cut(s)	784
Sfr274I	CTCGAG	1 cut(s)	1448
SgrAI	CRCCGGYG	2 cut(s)	526, 652
SinI	GGWCC	3 cut(s)	459, 499, 579
SlaI	CTCGAG	1 cut(s)	1448
SmaI	CCCGGG	3 cut(s)	323, 454, 681
SmlI	CTYRAG	2 cut(s)	65, 1448
SmoI	CTYRAG	2 cut(s)	65, 1448
Sse9I	AATT	2 cut(s)	383, 1403
StyI	CCWWGG	1 cut(s)	492
TaaI	ACNGT	4 cut(s)	788, 948, 1062, 1424
TaiI	ACGT	8 cut(s)	260, 287, 489, 561, 624, 633, 665, 723
TaqII	GACCGA	1 cut(s)	1219
TasI	AATT	2 cut(s)	383, 1403
TatI	WGTACW	2 cut(s)	186, 399
TauI	GCSGC	7 cut(s)	131, 296, 442, 475, 845, 914, 1027
TfiI	GAWTC	4 cut(s)	313, 346, 861, 889
Tru1I	TTAA	3 cut(s)	228, 974, 1242
Tru9I	TTAA	3 cut(s)	228, 974, 1242
TscAI	CASTG	1 cut(s)	891
TseFI	GTSAC	1 cut(s)	716
TseI	GCWGC	3 cut(s)	221, 276, 418
Tsp45I	GTSAC	1 cut(s)	716
TspDTI	ATGAA	1 cut(s)	251
TspGWI	ACGGA	2 cut(s)	192, 1120
TspMI	CCCGGG	3 cut(s)	321, 452, 679
TspRI	CASTG	1 cut(s)	891
Tth111I	GACNNNGTC	1 cut(s)	122
VpaK11BI	GGWCC	3 cut(s)	459, 499, 579
XceI	RCATGY	2 cut(s)	406, 1399
XhoI	CTCGAG	1 cut(s)	1448
XmaI	CCCGGG	3 cut(s)	321, 452, 679
XmiI	GTMKAC	1 cut(s)	929
XmnI	GAANNNNTTC	1 cut(s)	140
ZraI	GACGTC	2 cut(s)	258, 721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.