Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008198

Physical Location & Seq

Genomic Coordinates Reverse (-)

2052370 .. 2055548

Gene Structure 3179 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G06700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1086 bp

ATGCGTAAGTGGATCTGTTGTACATGTCAAATAGAAGACTCAAATGAAGAGCAACAACTGAAAAGTTCACAGCAGCAATCTGATGCAAATCATAAGAATTCAAAACCAGCACCTGTTGCAAAACATGAGGTTAAGAAGGAAGCTCTTCCCATCGAGGTCCCTCCCTTGTCTTTGGATGAGGTCAAGGAAAAGACTGAAAATTTTGGATCCAAGGCACTGATTGGTGAAGGGTCTTATGGGAGAGTATATTATGCGACACTAAATGATGGTGTGGCGGTTGCTCTGAAGAAACTTGATGTCGCACCTGAAGCTGAAACAGATACCGAATTCTTGAGTCAGGTTTCCATGGTCTCTAGGCTGAAGCATGAAAATCTCATTCAATTGCTTGGTTTTTGTGTTGATGGAAACCTCCGCGTCCTTGCATATGAGTTTGCAACAATGGGATCGTTGCATGACATCTTGCATGGTAGGAAGGGAGTTCAAGGAGCACAACCAGGTCCAACACTTGACTGGATAACGAGGGTGAAGATAGCGGTTGAGGCAGCTAGGGGTTTGGAATACCTCCATGAGAAGTCTCAGCCTCCTGTAATCCATAGGGACATAAGATCTAGCAATGTCCTTCTTTTTGAAGACTACAAAGCAAAGATTGCTGATTTCAATCTCTCGAATCAAGCACCTGATAATGCTGCCCGTCTTCACTCAACAAGAGTCTTGGGGACTTTTGGTTATCATGCTCCAGAATATGCAATGACTGGACAGTTAACTCAGAAGAGTGATGTGTACAGCTTTGGTGTTGTACTTCTAGAACTTCTTACAGGGAGGAAACCGGTGGATCATACCATGCCTAGAGGTCAACAGAGTCTTGTAACCTGGGCGACACCAAGACTCAGTGAAGATAAAGTGAAACAGTGCATTGATCCAAAGCTAAAAGCCGATTACCCTCCAAAAGCAGTTGCTAAGCTAGCAGCGGTGGCAGCATTGTGTGTGCAATACGAAGCTGAGTTTAGACCAAATATGAGCATAGTTGTGAAGGCGCTACAGCCTCTCCTGAAACCTCCAGCAGCAGCTCCAGCACCAGAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

361

Amino Acids

39.82

Weight (kDa)

7.14

Isoelectric Point (pI)

35.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	71 - 285	3.5e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	73 - 346	4e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06700 AT1G06700 AT1G06700 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740 AT2G30740
rosa_chinensis	RchiOBHm_Chr5g0078841
rosa_rugosa	Rorug05G0461400
rosa_samantha	Rh5CG561000
rosa_wichuraiana	Rw5G047820 Rw5G047930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	414
AciI	CCGC	4 cut(s)	275, 412, 533, 968
AclWI	GGATC	6 cut(s)	20, 201, 214, 451, 840, 911
AcsI	RAATTY	3 cut(s)	97, 199, 326
AcuI	CTGAAG	3 cut(s)	305, 327, 380
AfaI	GTAC	3 cut(s)	22, 782, 798
AflIII	ACRYGT	1 cut(s)	23
AgeI	ACCGGT	1 cut(s)	826
AgsI	TTSAA	5 cut(s)	102, 380, 482, 629, 658
AjnI	CCWGG	2 cut(s)	493, 869
AluBI	AGCT	8 cut(s)	143, 311, 545, 786, 925, 961, 998, 1067
AluI	AGCT	8 cut(s)	143, 311, 545, 786, 925, 961, 998, 1067
Alw21I	GWGCWC	1 cut(s)	490
Alw26I	GTCTC	2 cut(s)	355, 579
AlwI	GGATC	6 cut(s)	20, 201, 214, 451, 840, 911
AlwNI	CAGNNNCTG	1 cut(s)	113
ApeKI	GCWGC	7 cut(s)	73, 542, 686, 965, 974, 1061, 1064
ApoI	RAATTY	3 cut(s)	97, 199, 326
AsiGI	ACCGGT	1 cut(s)	826
Asp700I	GAANNNNTTC	1 cut(s)	144
AspLEI	GCGC	1 cut(s)	1036
AspS9I	GGNCC	2 cut(s)	157, 497
AsuHPI	GGTGA	2 cut(s)	236, 535
AsuNHI	GCTAGC	1 cut(s)	961
AvaII	GGWCC	2 cut(s)	157, 497
BamHI	GGATCC	1 cut(s)	206
BbsI	GAAGAC	3 cut(s)	42, 636, 686
Bbv12I	GWGCWC	1 cut(s)	490
BbvI	GCAGC	7 cut(s)	85, 554, 673, 977, 986, 1073, 1076
BccI	CCATC	3 cut(s)	158, 260, 395
BciT130I	CCWGG	2 cut(s)	495, 871
BcoDI	GTCTC	2 cut(s)	355, 579
BfaI	CTAG	6 cut(s)	354, 546, 609, 803, 846, 962
BfmI	CTRYAG	1 cut(s)	1037
BfoI	RGCGCY	1 cut(s)	1037
BglII	AGATCT	1 cut(s)	605
BisI	GCNGC	7 cut(s)	74, 543, 687, 966, 975, 1062, 1065
BlpI	GCTNAGC	1 cut(s)	957
BlsI	GCNGC	7 cut(s)	75, 544, 688, 967, 976, 1063, 1066
Bme1390I	CCNGG	2 cut(s)	495, 871
Bme18I	GGWCC	2 cut(s)	157, 497
BmgT120I	GGNCC	2 cut(s)	157, 497
BmiI	GGNNCC	2 cut(s)	159, 208
BmrFI	CCNGG	2 cut(s)	495, 871
BmsI	GCATC	1 cut(s)	73
BmtI	GCTAGC	1 cut(s)	965
BpiI	GAAGAC	3 cut(s)	42, 636, 686
BpmI	CTGGAG	3 cut(s)	720, 1041, 1053
Bpu1102I	GCTNAGC	1 cut(s)	957
BpuEI	CTTGAG	1 cut(s)	352
BsaBI	GATNNNNATC	2 cut(s)	87, 657
BsaI	GGTCTC	1 cut(s)	355
BsaJI	CCNNGG	3 cut(s)	210, 345, 870
BsaWI	WCCGGW	1 cut(s)	826
BsaXI	ACNNNNNCTCC	2 cut(s)	1029, 1059
Bse118I	RCCGGY	1 cut(s)	826
Bse1I	ACTGG	2 cut(s)	515, 757
Bse3DI	GCAATG	2 cut(s)	619, 753
Bse8I	GATNNNNATC	2 cut(s)	87, 657
BseBI	CCWGG	2 cut(s)	495, 871
BseDI	CCNNGG	3 cut(s)	210, 345, 870
BseGI	GGATG	1 cut(s)	181
BseJI	GATNNNNATC	2 cut(s)	87, 657
BseMI	GCAATG	2 cut(s)	619, 753
BseMII	CTCAG	4 cut(s)	590, 779, 901, 990
BseNI	ACTGG	2 cut(s)	515, 757
BseXI	GCAGC	7 cut(s)	85, 554, 673, 977, 986, 1073, 1076
Bsh1236I	CGCG	1 cut(s)	414
BshTI	ACCGGT	1 cut(s)	826
BsiHKAI	GWGCWC	1 cut(s)	490
BsiSI	CCGG	1 cut(s)	827
BslFI	GGGAC	3 cut(s)	143, 611, 730
BsmAI	GTCTC	2 cut(s)	355, 579
BsmFI	GGGAC	3 cut(s)	143, 611, 730
Bso31I	GGTCTC	1 cut(s)	355
Bsp1286I	GDGCHC	1 cut(s)	490
Bsp1407I	TGTACA	2 cut(s)	20, 780
Bsp143I	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
Bsp1720I	GCTNAGC	1 cut(s)	957
Bsp19I	CCATGG	1 cut(s)	345
BspACI	CCGC	4 cut(s)	275, 412, 533, 968
BspCNI	CTCAG	4 cut(s)	589, 778, 900, 991
BspFNI	CGCG	1 cut(s)	414
BspLI	GGNNCC	2 cut(s)	159, 208
BspOI	GCTAGC	1 cut(s)	965
BspPI	GGATC	6 cut(s)	20, 201, 214, 451, 840, 911
BspQI	GCTCTTC	2 cut(s)	42, 150
BspTNI	GGTCTC	1 cut(s)	355
BsrDI	GCAATG	2 cut(s)	619, 753
BsrFI	RCCGGY	1 cut(s)	826
BsrGI	TGTACA	2 cut(s)	20, 780
BsrI	ACTGG	2 cut(s)	515, 757
BssAI	RCCGGY	1 cut(s)	826
BssECI	CCNNGG	3 cut(s)	210, 345, 870
BssMI	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
BssT1I	CCWWGG	2 cut(s)	210, 345
Bst2UI	CCWGG	2 cut(s)	495, 871
Bst4CI	ACNGT	2 cut(s)	759, 909
Bst6I	CTCTTC	3 cut(s)	42, 150, 764
BstAPI	GCANNNNNTGC	2 cut(s)	116, 647
BstAUI	TGTACA	2 cut(s)	20, 780
BstC8I	GCNNGC	1 cut(s)	963
BstDEI	CTNAG	5 cut(s)	576, 765, 887, 957, 999
BstDSI	CCRYGG	1 cut(s)	345
BstF5I	GGATG	1 cut(s)	181
BstFNI	CGCG	1 cut(s)	414
BstH2I	RGCGCY	1 cut(s)	1037
BstHHI	GCGC	1 cut(s)	1036
BstKTI	GATC	6 cut(s)	15, 209, 446, 608, 835, 919
BstMAI	GTCTC	2 cut(s)	355, 579
BstMBI	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
BstMWI	GCNNNNNNNGC	8 cut(s)	116, 308, 539, 647, 962, 971, 974, 1070
BstNI	CCWGG	2 cut(s)	495, 871
BstNSI	RCATGY	1 cut(s)	27
BstSCI	CCNGG	2 cut(s)	493, 869
BstSFI	CTRYAG	1 cut(s)	1037
BstUI	CGCG	1 cut(s)	414
BstV1I	GCAGC	7 cut(s)	85, 554, 673, 977, 986, 1073, 1076
BstV2I	GAAGAC	3 cut(s)	42, 636, 686
BstX2I	RGATCY	3 cut(s)	12, 206, 605
BstYI	RGATCY	3 cut(s)	12, 206, 605
BtgI	CCRYGG	1 cut(s)	345
BtsCI	GGATG	1 cut(s)	181
BtsIMutI	CAGTG	3 cut(s)	215, 895, 914
Cac8I	GCNNGC	1 cut(s)	963
CaiI	CAGNNNCTG	1 cut(s)	113
CfoI	GCGC	1 cut(s)	1036
Cfr10I	RCCGGY	1 cut(s)	826
Cfr13I	GGNCC	2 cut(s)	157, 497
CseI	GACGC	1 cut(s)	403
CsiI	ACCWGGT	1 cut(s)	493
Csp6I	GTAC	3 cut(s)	21, 781, 797
CspAI	ACCGGT	1 cut(s)	826
CviAII	CATG	9 cut(s)	24, 125, 346, 365, 452, 464, 566, 731, 841
CviQI	GTAC	3 cut(s)	21, 781, 797
DdeI	CTNAG	5 cut(s)	576, 765, 887, 957, 999
DpnI	GATC	6 cut(s)	14, 208, 445, 607, 834, 918
DpnII	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
Eam1104I	CTCTTC	3 cut(s)	42, 150, 764
EarI	CTCTTC	3 cut(s)	42, 150, 764
Eco130I	CCWWGG	2 cut(s)	210, 345
Eco31I	GGTCTC	1 cut(s)	355
Eco47I	GGWCC	2 cut(s)	157, 497
Eco57I	CTGAAG	3 cut(s)	305, 327, 380
EcoO109I	RGGNCCY	1 cut(s)	157
EcoRI	GAATTC	2 cut(s)	97, 326
EcoRII	CCWGG	2 cut(s)	493, 869
EcoT14I	CCWWGG	2 cut(s)	210, 345
ErhI	CCWWGG	2 cut(s)	210, 345
FaeI	CATG	9 cut(s)	27, 128, 349, 368, 455, 467, 569, 734, 844
FaqI	GGGAC	3 cut(s)	143, 611, 730
FatI	CATG	9 cut(s)	23, 124, 345, 364, 451, 463, 565, 730, 840
FauNDI	CATATG	1 cut(s)	424
Fnu4HI	GCNGC	7 cut(s)	74, 543, 687, 966, 975, 1062, 1065
FokI	GGATG	1 cut(s)	188
Fsp4HI	GCNGC	7 cut(s)	74, 543, 687, 966, 975, 1062, 1065
FspBI	CTAG	6 cut(s)	354, 546, 609, 803, 846, 962
GlaI	GCGC	1 cut(s)	1035
GluI	GCNGC	7 cut(s)	74, 543, 687, 966, 975, 1062, 1065
GsuI	CTGGAG	3 cut(s)	720, 1041, 1053
HaeII	RGCGCY	1 cut(s)	1037
HapII	CCGG	1 cut(s)	827
HgaI	GACGC	1 cut(s)	403
HhaI	GCGC	1 cut(s)	1036
Hin1II	CATG	9 cut(s)	27, 128, 349, 368, 455, 467, 569, 734, 844
Hin6I	GCGC	1 cut(s)	1034
HinP1I	GCGC	1 cut(s)	1034
HincII	GTYRAC	2 cut(s)	762, 854
HindII	GTYRAC	2 cut(s)	762, 854
HinfI	GANTC	7 cut(s)	38, 334, 667, 708, 859, 885, 1079
HpaI	GTTAAC	1 cut(s)	762
HpaII	CCGG	1 cut(s)	827
HphI	GGTGA	2 cut(s)	236, 535
Hpy166II	GTNNAC	4 cut(s)	68, 762, 781, 854
Hpy188I	TCNGA	3 cut(s)	82, 285, 768
Hpy188III	TCNNGA	6 cut(s)	331, 664, 737, 803, 1048, 1083
Hpy8I	GTNNAC	4 cut(s)	68, 762, 781, 854
HpyAV	CCTTC	5 cut(s)	130, 221, 466, 629, 1024
HpyCH4III	ACNGT	2 cut(s)	759, 909
HpyCH4V	TGCA	9 cut(s)	86, 119, 422, 434, 451, 463, 746, 912, 988
HpyF10VI	GCNNNNNNNGC	8 cut(s)	116, 308, 539, 647, 962, 971, 974, 1070
HpyF3I	CTNAG	5 cut(s)	576, 765, 887, 957, 999
Hsp92II	CATG	9 cut(s)	27, 128, 349, 368, 455, 467, 569, 734, 844
HspAI	GCGC	1 cut(s)	1034
KspAI	GTTAAC	1 cut(s)	762
Kzo9I	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
LguI	GCTCTTC	2 cut(s)	42, 150
LmnI	GCTCC	3 cut(s)	485, 739, 1072
Lsp1109I	GCAGC	7 cut(s)	85, 554, 673, 977, 986, 1073, 1076
LweI	GCATC	1 cut(s)	73
MabI	ACCWGGT	1 cut(s)	493
MaeI	CTAG	6 cut(s)	354, 546, 609, 803, 846, 962
MaeIII	GTNAC	1 cut(s)	865
MalI	GATC	6 cut(s)	14, 208, 445, 607, 834, 918
MboI	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
MboII	GAAGA	9 cut(s)	47, 59, 137, 298, 538, 641, 686, 781, 905
MfeI	CAATTG	1 cut(s)	380
MflI	RGATCY	3 cut(s)	12, 206, 605
MhlI	GDGCHC	1 cut(s)	490
MluCI	AATT	4 cut(s)	97, 199, 326, 380
MlyI	GAGTC	5 cut(s)	32, 343, 717, 868, 879
MmeI	TCCRAC	1 cut(s)	524
MroXI	GAANNNNTTC	1 cut(s)	144
MseI	TTAA	2 cut(s)	132, 761
MslI	CAYNNNNRTG	1 cut(s)	1025
MspA1I	CMGCKG	1 cut(s)	968
MspI	CCGG	1 cut(s)	827
MspR9I	CCNGG	2 cut(s)	495, 871
MunI	CAATTG	1 cut(s)	380
MvaI	CCWGG	2 cut(s)	495, 871
MvnI	CGCG	1 cut(s)	414
MwoI	GCNNNNNNNGC	8 cut(s)	116, 308, 539, 647, 962, 971, 974, 1070
NcoI	CCATGG	1 cut(s)	345
NdeI	CATATG	1 cut(s)	424
NdeII	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
NheI	GCTAGC	1 cut(s)	961
NlaIII	CATG	9 cut(s)	27, 128, 349, 368, 455, 467, 569, 734, 844
NlaIV	GGNNCC	2 cut(s)	159, 208
NspI	RCATGY	1 cut(s)	27
PciI	ACATGT	1 cut(s)	23
PciSI	GCTCTTC	2 cut(s)	42, 150
PdmI	GAANNNNTTC	1 cut(s)	144
PfeI	GAWTC	2 cut(s)	667, 1079
PinAI	ACCGGT	1 cut(s)	826
PkrI	GCNGC	7 cut(s)	75, 544, 688, 967, 976, 1063, 1066
PleI	GAGTC	5 cut(s)	32, 342, 716, 867, 879
PpsI	GAGTC	5 cut(s)	32, 342, 716, 867, 879
PpuMI	RGGWCCY	1 cut(s)	157
PscI	ACATGT	1 cut(s)	23
Psp5II	RGGWCCY	1 cut(s)	157
Psp6I	CCWGG	2 cut(s)	493, 869
PspGI	CCWGG	2 cut(s)	493, 869
PspN4I	GGNNCC	2 cut(s)	159, 208
PspPI	GGNCC	2 cut(s)	157, 497
PspPPI	RGGWCCY	1 cut(s)	157
PstNI	CAGNNNCTG	1 cut(s)	113
PsuI	RGATCY	3 cut(s)	12, 206, 605
RsaI	GTAC	3 cut(s)	22, 782, 798
RsaNI	GTAC	3 cut(s)	21, 781, 797
RseI	CAYNNNNRTG	1 cut(s)	1025
SapI	GCTCTTC	2 cut(s)	42, 150
SaqAI	TTAA	2 cut(s)	132, 761
SatI	GCNGC	7 cut(s)	74, 543, 687, 966, 975, 1062, 1065
Sau3AI	GATC	6 cut(s)	12, 206, 443, 605, 832, 916
Sau96I	GGNCC	2 cut(s)	157, 497
SchI	GAGTC	5 cut(s)	32, 343, 717, 868, 879
ScrFI	CCNGG	2 cut(s)	495, 871
SduI	GDGCHC	1 cut(s)	490
SexAI	ACCWGGT	1 cut(s)	493
SfaNI	GCATC	1 cut(s)	73
SfcI	CTRYAG	1 cut(s)	1037
SinI	GGWCC	2 cut(s)	157, 497
SmiMI	CAYNNNNRTG	1 cut(s)	1025
SmlI	CTYRAG	1 cut(s)	331
SmoI	CTYRAG	1 cut(s)	331
Sse9I	AATT	4 cut(s)	97, 199, 326, 380
SsiI	CCGC	4 cut(s)	275, 412, 533, 968
SspMI	CTAG	6 cut(s)	354, 546, 609, 803, 846, 962
StyD4I	CCNGG	2 cut(s)	493, 869
StyI	CCWWGG	2 cut(s)	210, 345
TaaI	ACNGT	2 cut(s)	759, 909
TaqI	TCGA	2 cut(s)	153, 665
TasI	AATT	4 cut(s)	97, 199, 326, 380
TatI	WGTACW	3 cut(s)	20, 780, 796
TfiI	GAWTC	2 cut(s)	667, 1079
Tru1I	TTAA	2 cut(s)	132, 761
Tru9I	TTAA	2 cut(s)	132, 761
TscAI	CASTG	3 cut(s)	222, 895, 914
TseI	GCWGC	7 cut(s)	73, 542, 686, 965, 974, 1061, 1064
TspDTI	ATGAA	2 cut(s)	60, 381
TspRI	CASTG	3 cut(s)	222, 895, 914
VpaK11BI	GGWCC	2 cut(s)	157, 497
XapI	RAATTY	3 cut(s)	97, 199, 326
XbaI	TCTAGA	1 cut(s)	802
XceI	RCATGY	1 cut(s)	27
XcmI	CCANNNNNNNNNTGG	1 cut(s)	507
XmnI	GAANNNNTTC	1 cut(s)	144
XspI	CTAG	6 cut(s)	354, 546, 609, 803, 846, 962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.