AT1G07710

Domain of unknown function

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
2386164 .. 2388350
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G07710.1

Sequence Viewer

Length: 1632 bp
ATGGAAGGGGAAGAAGACACTGTGGCGGGTTCTAGCATACCAAAGAAGAAAATGATGAAACAGCTGACAGGAAAACGCGACGACACTCTGCTTCATTCAGCAGTGAGACACGGAAACAAAGACAGAGTTGTTGAGATTCTTACGAAAACCAGAGAGTCTGAGTTGAATCAGCTGTTGGGGAAACAGAACCAGTCAGGCGAAACCGCACTCTATGTTGCAGCAGAGTATGGTGATGTAGAGATTGTCAAGGAGATGATCAACTGCTATGATCTTGCTCTCGTTGAGATCAAAGCAAGGAACGGATTTGATGCTTTCCACATTGCTGCAAAGCAAGGAGATCTCGATGTGTTGAAGGTTTTAGCAGAGGCTCATTCGGAGTTAGCGATGACGGTGGATCTATCAAACACTACGGCACTGCACACAGCGGCAACACAAGGACACACTGAAGTGGTAAACTTTCTTTTGGAACTGGGAAGCAGCCTTGCTGGAATTGCCAAGAGCAATGGTAAGACGGCCCTGCACTCTGCATCAAGGAACGGGCATGTCAAAGTCATTAAGGCTCTCTTGGCATCCGAACCTGCGATCGCAATAAGGATGGACAAGAAGGGCCAAACAGCCCTTCACATGGCGGTTAAAGGAACAAATGTTGAGGTCGTGGAGGAACTTATCAAAGCAGATAGGTCTTCTATCAATATAGCCGACACAAAGGGAAACACAGCGTTGCACATTGCAGCCCGAAAAGGCAGATCTCAGATTGTCAAGTTGCTATTAGCCAACAACATGACAGACACAAAAGCTGTTAACCGATCAGGCGAAACCGCACTTGACACAGCAGAGAAAATTGGAAATCCAGAAGTGGCTCTTATTTTACAGAAACATGGTGTTCCCAGCGCCAAGACCATTAAGCCATCCGGGCCTAACCCCGCTCGGGAACTGAAACAAACCGTAAGCGATATCAAGCATGAGGTTCACAATCAGCTTGAGCACACACGCCTGACCAGAAAACGTGTTCAAGGAATCGCCAAACAGCTTAACAAAATGCACACTGAAGGTCTTAACAATGCAATCAACTCGACTACTGTTGTAGCTGTTCTTATTGCCACGGTCGCTTTTGCAGCAATTTTCACTGTCCCGGGGCAGTATGTAGAAGACACAAGTAAAATTCCAGATGGGCATTCCCTCGGGGAGGCGAATATTGCATCGACGACTCCGTTCATAATTTTCTTCATCTTTGATTCGATCGCACTCTTCATCTCCTTAGCGGTCGTGGTGGTTCAGACATCAGTGGTGGTAATAGAGAGCAAGGCCAAGAAACAGATGATGGCTGTGATAAACAAACTCATGTGGCTTGCCTGTGTTCTCATCTCTGTTGCCTTTTTGGCTTTGTCGTTTGTTGTTGTTGGTGAAGAAGAGAAGTGGCTAGCCATTTGGGTGACTGCTATCGGGGCAACTATAATGATTACGACGTTAGGGACGATGTGCTACTGGATAATACAGCACAAGATCGAAGCTGCCAATTTAAGAAACATTAGAAGATCCTCCATCAACAGTATATCTGGATCCTGGGGGATTCCCCAGCTTACGGATTCTGATATTCTCCAGAACGAGTGTAAGAAAATGTATGCAATCTGA
Functional Annotation

Protein Analysis

543

Amino Acids

58.91

Weight (kDa)

8.76

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 26 - 87 3.1e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 98 - 159 3.1e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 106 - 155 1.2e-08 Ankyrin repeats (many copies)
Ank_4 PF13637 139 - 189 1.9e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 166 - 232 2.1e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 173 - 220 2.2e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 194 - 241 9.7e-06 Ankyrin repeats (many copies)
Ank_4 PF13637 207 - 257 9.1e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 216 - 294 8.9e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 225 - 278 6e-10 Ankyrin repeats (many copies)
Ank PF00023 237 - 264 2.9e-06 Ankyrin repeat
PGG PF13962 350 - 466 1e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011729)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 586
AccBSI CCGCTC 1 cut(s) 926
AccII CGCG 1 cut(s) 78
AciI CCGC 7 cut(s) 26, 204, 425, 629, 819, 924, 1262
AclWI GGATC 4 cut(s) 402, 1530, 1554, 1567
AcsI RAATTY 1 cut(s) 1161
AcuI CTGAAG 2 cut(s) 465, 1068
AfiI CCNNNNNNNGG 4 cut(s) 625, 928, 1186, 1582
AflIII ACRYGT 1 cut(s) 1006
AgsI TTSAA 3 cut(s) 166, 352, 1013
AjnI CCWGG 1 cut(s) 1562
AjuI GAANNNNNNNTTGG 4 cut(s) 158, 190, 603, 635
AleI CACNNNNGTG 1 cut(s) 446
AluBI AGCT 8 cut(s) 64, 172, 797, 979, 1030, 1088, 1511, 1579
AluI AGCT 8 cut(s) 64, 172, 797, 979, 1030, 1088, 1511, 1579
Alw21I GWGCWC 1 cut(s) 987
Alw26I GTCTC 1 cut(s) 100
AlwI GGATC 4 cut(s) 402, 1530, 1554, 1567
Ama87I CYCGRG 3 cut(s) 927, 1132, 1181
AoxI GGCC 4 cut(s) 513, 607, 914, 1305
ApeKI GCWGC 6 cut(s) 218, 323, 477, 731, 1115, 1511
ApoI RAATTY 1 cut(s) 1161
AsiSI GCGATCGC 1 cut(s) 585
AspLEI GCGC 1 cut(s) 893
AspS9I GGNCC 3 cut(s) 514, 607, 914
AsuC2I CCSGG 3 cut(s) 913, 1133, 1134
AsuHPI GGTGA 3 cut(s) 242, 1415, 1444
AsuNHI GCTAGC 1 cut(s) 1420
AvaI CYCGRG 3 cut(s) 927, 1132, 1181
BamHI GGATCC 1 cut(s) 1559
BbsI GAAGAC 3 cut(s) 21, 675, 1155
Bbv12I GWGCWC 1 cut(s) 987
BbvI GCAGC 6 cut(s) 230, 310, 489, 743, 1127, 1498
BccI CCATC 5 cut(s) 589, 916, 1163, 1315, 1550
BceAI ACGGC 2 cut(s) 426, 528
BcgI CGANNNNNNTGC 2 cut(s) 1053, 1087
BciT130I CCWGG 1 cut(s) 1564
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 3 cut(s) 913, 1133, 1134
BcoDI GTCTC 1 cut(s) 100
BfaI CTAG 2 cut(s) 33, 1421
BfoI RGCGCY 1 cut(s) 894
BfuAI ACCTGC 1 cut(s) 586
BglI GCCNNNNNGGC 2 cut(s) 913, 1379
BglII AGATCT 2 cut(s) 337, 746
BisI GCNGC 7 cut(s) 219, 324, 426, 478, 732, 1116, 1512
BlsI GCNGC 7 cut(s) 220, 325, 427, 479, 733, 1117, 1513
Bme1390I CCNGG 4 cut(s) 913, 1133, 1134, 1564
BmeT110I CYCGRG 3 cut(s) 927, 1132, 1181
BmgT120I GGNCC 3 cut(s) 514, 607, 914
BmiI GGNNCC 1 cut(s) 1561
BmrFI CCNGG 4 cut(s) 913, 1133, 1134, 1564
BmrI ACTGGG 1 cut(s) 479
BmsI GCATC 4 cut(s) 298, 536, 578, 1208
BmtI GCTAGC 1 cut(s) 1424
BmuI ACTGGG 1 cut(s) 479
BpiI GAAGAC 3 cut(s) 21, 675, 1155
BpmI CTGGAG 1 cut(s) 1583
Bpu10I CCTNAGC 1 cut(s) 1258
BpuEI CTTGAG 1 cut(s) 1001
BpuMI CCSGG 3 cut(s) 913, 1133, 1134
BsaJI CCNNGG 5 cut(s) 1101, 1132, 1133, 1180, 1563
Bsc4I CCNNNNNNNGG 4 cut(s) 625, 928, 1186, 1582
Bse1I ACTGG 3 cut(s) 190, 474, 1490
Bse3DI GCAATG 3 cut(s) 318, 508, 726
BseBI CCWGG 1 cut(s) 1564
BseDI CCNNGG 5 cut(s) 1101, 1132, 1133, 1180, 1563
BseGI GGATG 3 cut(s) 569, 600, 908
BseLI CCNNNNNNNGG 4 cut(s) 625, 928, 1186, 1582
BseMI GCAATG 3 cut(s) 318, 508, 726
BseMII CTCAG 2 cut(s) 150, 764
BseNI ACTGG 3 cut(s) 190, 474, 1490
BseXI GCAGC 6 cut(s) 230, 310, 489, 743, 1127, 1498
BseYI CCCAGC 2 cut(s) 887, 1575
BsgI GTGCAG 2 cut(s) 401, 503
Bsh1236I CGCG 1 cut(s) 78
Bsh1285I CGRYCG 4 cut(s) 585, 1107, 1242, 1266
BshFI GGCC 4 cut(s) 515, 609, 916, 1307
BsiEI CGRYCG 4 cut(s) 585, 1107, 1242, 1266
BsiHKAI GWGCWC 1 cut(s) 987
BsiHKCI CYCGRG 3 cut(s) 927, 1132, 1181
BsiSI CCGG 2 cut(s) 912, 1133
BslFI GGGAC 2 cut(s) 1115, 1486
BslI CCNNNNNNNGG 4 cut(s) 625, 928, 1186, 1582
BsmAI GTCTC 1 cut(s) 100
BsmFI GGGAC 2 cut(s) 1115, 1486
BsmI GAATGC 1 cut(s) 1174
BsnI GGCC 4 cut(s) 515, 609, 916, 1307
BsoBI CYCGRG 3 cut(s) 927, 1132, 1181
Bsp1286I GDGCHC 1 cut(s) 987
BspACI CCGC 7 cut(s) 26, 204, 425, 629, 819, 924, 1262
BspANI GGCC 4 cut(s) 515, 609, 916, 1307
BspCNI CTCAG 2 cut(s) 151, 763
BspFNI CGCG 1 cut(s) 78
BspLI GGNNCC 1 cut(s) 1561
BspMI ACCTGC 1 cut(s) 586
BspOI GCTAGC 1 cut(s) 1424
BspPI GGATC 4 cut(s) 402, 1530, 1554, 1567
BsrBI CCGCTC 1 cut(s) 926
BsrDI GCAATG 3 cut(s) 318, 508, 726
BsrI ACTGG 3 cut(s) 190, 474, 1490
BssECI CCNNGG 5 cut(s) 1101, 1132, 1133, 1180, 1563
Bst2UI CCWGG 1 cut(s) 1564
Bst4CI ACNGT 7 cut(s) 22, 391, 946, 1081, 1105, 1129, 1550
Bst6I CTCTTC 2 cut(s) 1253, 1404
BstC8I GCNNGC 2 cut(s) 1350, 1422
BstDEI CTNAG 3 cut(s) 159, 750, 1258
BstDSI CCRYGG 1 cut(s) 1101
BstENI CCTNNNNNAGG 1 cut(s) 1184
BstF5I GGATG 3 cut(s) 569, 600, 908
BstFNI CGCG 1 cut(s) 78
BstH2I RGCGCY 1 cut(s) 894
BstHHI GCGC 1 cut(s) 893
BstMAI GTCTC 1 cut(s) 100
BstMCI CGRYCG 4 cut(s) 585, 1107, 1242, 1266
BstMWI GCNNNNNNNGC 8 cut(s) 491, 566, 913, 1106, 1115, 1196, 1379, 1445
BstNI CCWGG 1 cut(s) 1564
BstNSI RCATGY 1 cut(s) 545
BstSCI CCNGG 4 cut(s) 911, 1131, 1132, 1562
BstUI CGCG 1 cut(s) 78
BstV1I GCAGC 6 cut(s) 230, 310, 489, 743, 1127, 1498
BstV2I GAAGAC 3 cut(s) 21, 675, 1155
BstX2I RGATCY 5 cut(s) 337, 394, 746, 1535, 1559
BstYI RGATCY 5 cut(s) 337, 394, 746, 1535, 1559
BsuRI GGCC 4 cut(s) 515, 609, 916, 1307
BtgI CCRYGG 1 cut(s) 1101
BtgZI GCGATG 1 cut(s) 398
BtsCI GGATG 3 cut(s) 569, 600, 908
BtsI GCAGTG 2 cut(s) 108, 413
BtsIMutI CAGTG 7 cut(s) 18, 108, 413, 441, 1044, 1125, 1290
BveI ACCTGC 1 cut(s) 586
Cac8I GCNNGC 2 cut(s) 1350, 1422
CfoI GCGC 1 cut(s) 893
Cfr13I GGNCC 3 cut(s) 514, 607, 914
Cfr9I CCCGGG 1 cut(s) 1132
CviAII CATG 6 cut(s) 542, 625, 781, 878, 962, 1342
DdeI CTNAG 3 cut(s) 159, 750, 1258
Eam1104I CTCTTC 2 cut(s) 1253, 1404
EarI CTCTTC 2 cut(s) 1253, 1404
Eco32I GATATC 1 cut(s) 955
Eco57I CTGAAG 2 cut(s) 465, 1068
Eco88I CYCGRG 3 cut(s) 927, 1132, 1181
EcoNI CCTNNNNNAGG 1 cut(s) 1184
EcoRII CCWGG 1 cut(s) 1562
EcoRV GATATC 1 cut(s) 955
FaeI CATG 6 cut(s) 545, 628, 784, 881, 965, 1345
FalI AAGNNNNNCTT 4 cut(s) 548, 580, 846, 878
FaqI GGGAC 2 cut(s) 1115, 1486
FatI CATG 6 cut(s) 541, 624, 780, 877, 961, 1341
FauI CCCGC 2 cut(s) 19, 931
FbaI TGATCA 1 cut(s) 255
Fnu4HI GCNGC 7 cut(s) 219, 324, 426, 478, 732, 1116, 1512
FokI GGATG 3 cut(s) 556, 607, 895
Fsp4HI GCNGC 7 cut(s) 219, 324, 426, 478, 732, 1116, 1512
FspBI CTAG 2 cut(s) 33, 1421
GlaI GCGC 1 cut(s) 892
GluI GCNGC 7 cut(s) 219, 324, 426, 478, 732, 1116, 1512
GsaI CCCAGC 2 cut(s) 891, 1579
GsuI CTGGAG 1 cut(s) 1583
HaeII RGCGCY 1 cut(s) 894
HaeIII GGCC 4 cut(s) 515, 609, 916, 1307
HapII CCGG 2 cut(s) 912, 1133
HhaI GCGC 1 cut(s) 893
Hin1II CATG 6 cut(s) 545, 628, 784, 881, 965, 1345
Hin6I GCGC 1 cut(s) 891
HinP1I GCGC 1 cut(s) 891
HincII GTYRAC 1 cut(s) 802
HindII GTYRAC 1 cut(s) 802
HinfI GANTC 8 cut(s) 136, 155, 166, 1017, 1207, 1235, 1570, 1586
HpaI GTTAAC 1 cut(s) 802
HpaII CCGG 2 cut(s) 912, 1133
HphI GGTGA 3 cut(s) 242, 1415, 1444
Hpy166II GTNNAC 3 cut(s) 454, 802, 970
Hpy188I TCNGA 7 cut(s) 160, 376, 574, 753, 1278, 1591, 1631
Hpy188III TCNNGA 6 cut(s) 341, 851, 929, 1166, 1557, 1600
Hpy8I GTNNAC 3 cut(s) 454, 802, 970
Hpy99I CGWCG 3 cut(s) 83, 1207, 1468
HpyAV CCTTC 4 cut(s) 346, 598, 629, 1043
HpyCH4III ACNGT 7 cut(s) 22, 391, 946, 1081, 1105, 1129, 1550
HpyCH4IV ACGT 2 cut(s) 1006, 1466
HpyF10VI GCNNNNNNNGC 8 cut(s) 491, 566, 913, 1106, 1115, 1196, 1379, 1445
HpyF3I CTNAG 3 cut(s) 159, 750, 1258
HpySE526I ACGT 2 cut(s) 1006, 1466
Hsp92II CATG 6 cut(s) 545, 628, 784, 881, 965, 1345
HspAI GCGC 1 cut(s) 891
Ksp22I TGATCA 1 cut(s) 255
KspAI GTTAAC 1 cut(s) 802
Lsp1109I GCAGC 6 cut(s) 230, 310, 489, 743, 1127, 1498
LweI GCATC 4 cut(s) 298, 536, 578, 1208
MaeI CTAG 2 cut(s) 33, 1421
MaeII ACGT 2 cut(s) 1006, 1466
MaeIII GTNAC 1 cut(s) 1432
MbiI CCGCTC 1 cut(s) 926
MflI RGATCY 5 cut(s) 337, 394, 746, 1535, 1559
MhlI GDGCHC 1 cut(s) 987
MluCI AATT 6 cut(s) 489, 840, 1119, 1161, 1218, 1516
MlyI GAGTC 2 cut(s) 164, 1201
MnlI CCTC 7 cut(s) 358, 643, 652, 958, 1180, 1190, 1549
MseI TTAA 7 cut(s) 555, 633, 801, 903, 1032, 1056, 1520
MslI CAYNNNNRTG 2 cut(s) 446, 1430
MspA1I CMGCKG 3 cut(s) 64, 172, 425
MspI CCGG 2 cut(s) 912, 1133
MspR9I CCNGG 4 cut(s) 913, 1133, 1134, 1564
Mva1269I GAATGC 1 cut(s) 1174
MvaI CCWGG 1 cut(s) 1564
MvnI CGCG 1 cut(s) 78
MwoI GCNNNNNNNGC 8 cut(s) 491, 566, 913, 1106, 1115, 1196, 1379, 1445
NciI CCSGG 3 cut(s) 913, 1133, 1134
NheI GCTAGC 1 cut(s) 1420
NlaIII CATG 6 cut(s) 545, 628, 784, 881, 965, 1345
NlaIV GGNNCC 1 cut(s) 1561
NmuCI GTSAC 1 cut(s) 1432
NspI RCATGY 1 cut(s) 545
OliI CACNNNNGTG 1 cut(s) 446
PcsI WCGNNNNNNNCGW 3 cut(s) 380, 1208, 1472
PctI GAATGC 1 cut(s) 1174
PfeI GAWTC 6 cut(s) 136, 166, 1017, 1235, 1570, 1586
PkrI GCNGC 7 cut(s) 220, 325, 427, 479, 733, 1117, 1513
Ple19I CGATCG 2 cut(s) 585, 1242
PleI GAGTC 2 cut(s) 163, 1201
PpsI GAGTC 2 cut(s) 163, 1201
Psp6I CCWGG 1 cut(s) 1562
PspFI CCCAGC 2 cut(s) 887, 1575
PspGI CCWGG 1 cut(s) 1562
PspN4I GGNNCC 1 cut(s) 1561
PspPI GGNCC 3 cut(s) 514, 607, 914
PsuI RGATCY 5 cut(s) 337, 394, 746, 1535, 1559
PvuI CGATCG 2 cut(s) 585, 1242
PvuII CAGCTG 2 cut(s) 64, 172
RgaI GCGATCGC 1 cut(s) 585
RseI CAYNNNNRTG 2 cut(s) 446, 1430
SaqAI TTAA 7 cut(s) 555, 633, 801, 903, 1032, 1056, 1520
SatI GCNGC 7 cut(s) 219, 324, 426, 478, 732, 1116, 1512
Sau96I GGNCC 3 cut(s) 514, 607, 914
SchI GAGTC 2 cut(s) 164, 1201
ScrFI CCNGG 4 cut(s) 913, 1133, 1134, 1564
SduI GDGCHC 1 cut(s) 987
SfaAI GCGATCGC 1 cut(s) 585
SfaNI GCATC 4 cut(s) 298, 536, 578, 1208
SgfI GCGATCGC 1 cut(s) 585
SmaI CCCGGG 1 cut(s) 1134
SmiMI CAYNNNNRTG 2 cut(s) 446, 1430
SmlI CTYRAG 1 cut(s) 980
SmoI CTYRAG 1 cut(s) 980
Sse9I AATT 6 cut(s) 489, 840, 1119, 1161, 1218, 1516
SsiI CCGC 7 cut(s) 26, 204, 425, 629, 819, 924, 1262
SspI AATATT 1 cut(s) 1195
SspMI CTAG 2 cut(s) 33, 1421
StyD4I CCNGG 4 cut(s) 911, 1131, 1132, 1562
TaaI ACNGT 7 cut(s) 22, 391, 946, 1081, 1105, 1129, 1550
TaiI ACGT 2 cut(s) 1009, 1469
TaqI TCGA 5 cut(s) 342, 1073, 1202, 1238, 1506
TasI AATT 6 cut(s) 489, 840, 1119, 1161, 1218, 1516
TauI GCSGC 1 cut(s) 428
TfiI GAWTC 6 cut(s) 136, 166, 1017, 1235, 1570, 1586
Tru1I TTAA 7 cut(s) 555, 633, 801, 903, 1032, 1056, 1520
Tru9I TTAA 7 cut(s) 555, 633, 801, 903, 1032, 1056, 1520
TscAI CASTG 7 cut(s) 25, 108, 420, 448, 1051, 1132, 1290
TseFI GTSAC 1 cut(s) 1432
TseI GCWGC 6 cut(s) 218, 323, 477, 731, 1115, 1511
Tsp45I GTSAC 1 cut(s) 1432
TspDTI ATGAA 5 cut(s) 71, 83, 1204, 1216, 1240
TspGWI ACGGA 4 cut(s) 126, 315, 1200, 1598
TspMI CCCGGG 1 cut(s) 1132
TspRI CASTG 7 cut(s) 25, 108, 420, 448, 1051, 1132, 1290
XagI CCTNNNNNAGG 1 cut(s) 1184
XapI RAATTY 1 cut(s) 1161
XceI RCATGY 1 cut(s) 545
XmaI CCCGGG 1 cut(s) 1132
XspI CTAG 2 cut(s) 33, 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.