MD11G1116700.v1.1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0011729
Physical Location & Seq
Forward (+)
10558998 .. 10561913
2916 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1116700.v1.1.491

Sequence Viewer

Length: 1650 bp
ATGGAGGCAGAGGCGGCCTCGGCTGAGCAGCCGCAGGCGGCGGCGCAGCCAACCTTGCCCCGGAAGAAGATGACGAAGCAGCTAACAGGAAAGCGCGATGACACGCCTTTGCATTCCGGAGCGAGGTCAGGAAGCATGGCGGTGGTGATGGATATCCTTGAAAATACAGAAGAGGGTGCGTTGAAGGAGTTATTGACAAAGCAGAACTCATCTGATGAAACAGCACTATATATTGCTGCAGAATATGGTTATGTTGATTTGGTCAGGGAGATGATCAAGTACTATGATCTCGCTGACGCCGGAATCAAAGCGAGAAACGGGTTTGATGCGTTCCACATTGCTGCCAAACAAGGGGATATGGATGTGTTGAATGTGCTTATGGAGGCTCATCCGGAATTGACCATGACGGTGGATCTATCAAACACCACGGCTTTGCACACAGCTGCGGCGCAAGGGCATATCGAGGTGGTGAACTTTCTGTTGGAAGCAGGAAGCAGCCTGGCAACCATTGCTAAAAGCAATGGCAAGACCGCGCTGCATTCTGCGGCGAGAAATGGTCATTTGGAGGTTCTGGTAGCGTTTTTGGACAAGGAGCCTGGTATCGCAACACGTGTGGATAAGAAGGGGCAAACGGCACTTCACATGGCGGCTAAGGGGCAGAATCTTGAGGTGGTGGAGCAGTTGATTAACGCAGATCCTTCTTTGATAAACATGGCGGATAACAAAGACAATACCGCATTGCATATAGCTACTCGGAAGGGTAGAGGGGAGATTGTGAAGATGCTACTCGAACACAGTGAAACCAACACAAGGGCAGTAAACAAGTCTGCAGAAACTGCCCTTGACACTGCCGAGAAAACTGGGAACTCGGACATTAAAGCTTTTCTCCAAGAGCGCGGTGTCCAGAGTGCTAAAGAAATCAAGCCACAAGCAAGAAACCCAGCTCGAGAGCTGAAACAAACGGTGAGTGACATCAAGCACGAAGTCCACCACCAGCTAGAACACACTCGCCAGACCAGAAGACGCGTCCAAGGCATTGCCAAACGCCTTCACAAAATGCACTCGGAAGGCCTCAACAATGCCATAAACTCAAACACTGTCGTGGCTGTCCTCATTGCCACGGTCACCTTTGCAGCAATTTTCCAAATCCCTGGCCAATACGTTGATGACCCTGGAGACATTCCCAAGGGGCAGTCACTTGGCGAGGCAAACATTGCTCCCAAACTCGCCTTCATAATCTTCTTCATCTTCGACTCCATTGCGCTTTTCATTTCTCTTGCTGTCGTGGTGGTGCAAACTTCAGTGGTGGTAATCGAGAGCAAGGCGAAGAAGCAGATGATGGCGATCATCAACAAGCTGATGTGGTTGGCTTGCGTGCTTGTTTCCGTGGCATTTTTGGCGCTCTCTTTCGTTGTGGTGGGCGAACAGAAGTGGCTAGCAATTGGAGTAACAATCATAGGAACTGTAATTATGGCTGCAACTTTAGGGACTATGTGTTTCTGGGTAGTTAGGCATCGGATTGAGGCGAAAAACATGAGGAGCATTGGGAGAACATCGTTGGACAGCAGATCGCGGTCGTGGTCGTTGTCTGCAGTAATGTCTGAATCTGAGCTCCTCAACAATGACTATAAGAAGATGTATGCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

550

Amino Acids

59.92

Weight (kDa)

7.8

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 98 - 166 3.8e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 112 - 161 3.5e-08 Ankyrin repeats (many copies)
Ank_4 PF13637 145 - 194 3.5e-10 Ankyrin repeats (many copies)
Ank_2 PF12796 173 - 233 4.2e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 179 - 228 8.1e-08 Ankyrin repeats (many copies)
Ank_5 PF13857 204 - 250 1.8e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 221 - 301 2.2e-09 Ankyrin repeats (3 copies)
PGG PF13962 356 - 472 2e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07710 AT1G07710 AT5G60070
fragaria_vesca FvH4_3g34650 FvH4_3g34650
malus_domestica MD03G1103100.v1.1 MD11G1116700.v1.1
prunus_persica Prupe.6G087100_v2.0.a1
pyrus_communis pycom03g08370 pycom11g09810
rosa_chinensis RchiOBHm_Chr5g0062351
rosa_laevigata RLG00000035552
rosa_multiflora Rmu_sc0010221.1_g000002
rosa_roxburghii Rroxscaffold_1G00018330
rosa_rugosa Rorug05G0348900
rosa_samantha Rh5BG422800 Rh5CG446800 Rh5DG437600
rosa_wichuraiana Rw5G038520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 5 cut(s) 96, 533, 897, 1026, 1573
AccIII TCCGGA 2 cut(s) 116, 391
AclWI GGATC 2 cut(s) 420, 689
AcoI YGGCCR 1 cut(s) 1153
AcuI CTGAAG 1 cut(s) 1284
AcvI CACGTG 1 cut(s) 611
AcyI GRCGYC 1 cut(s) 297
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 4 cut(s) 60, 123, 351, 810
AflIII ACRYGT 3 cut(s) 608, 610, 1024
AgsI TTSAA 3 cut(s) 161, 184, 370
AjnI CCWGG 4 cut(s) 498, 595, 1150, 1171
AjuI GAANNNNNNNTTGG 4 cut(s) 464, 496, 1214, 1246
AleI CACNNNNGTG 1 cut(s) 1100
AluBI AGCT 9 cut(s) 82, 443, 749, 881, 944, 952, 997, 1357, 1612
AluI AGCT 9 cut(s) 82, 443, 749, 881, 944, 952, 997, 1357, 1612
Alw21I GWGCWC 1 cut(s) 1614
Alw26I GTCTC 1 cut(s) 1170
AlwI GGATC 2 cut(s) 420, 689
AlwNI CAGNNNCTG 1 cut(s) 836
Ama87I CYCGRG 1 cut(s) 945
Aor13HI TCCGGA 2 cut(s) 116, 391
AoxI GGCC 3 cut(s) 15, 1069, 1153
AspLEI GCGC 7 cut(s) 46, 96, 451, 535, 897, 1264, 1402
AsuC2I CCSGG 1 cut(s) 61
AsuHPI GGTGA 4 cut(s) 157, 481, 976, 1117
AsuNHI GCTAGC 1 cut(s) 1435
AvaI CYCGRG 1 cut(s) 945
BalI TGGCCA 1 cut(s) 1155
BanII GRGCYC 1 cut(s) 1614
BbrPI CACGTG 1 cut(s) 611
BbsI GAAGAC 1 cut(s) 1027
Bbv12I GWGCWC 1 cut(s) 1614
BccI CCATC 2 cut(s) 142, 1333
BceAI ACGGC 2 cut(s) 444, 648
BcgI CGANNNNNNTGC 2 cut(s) 1241, 1275
BciT130I CCWGG 4 cut(s) 500, 597, 1152, 1173
BclI TGATCA 1 cut(s) 273
BcnI CCSGG 1 cut(s) 61
BcoDI GTCTC 1 cut(s) 1170
BfaI CTAG 2 cut(s) 998, 1436
BfmI CTRYAG 3 cut(s) 237, 828, 1590
BfoI RGCGCY 1 cut(s) 1403
BlpI GCTNAGC 1 cut(s) 24
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 5 cut(s) 61, 500, 597, 1152, 1173
BmeT110I CYCGRG 1 cut(s) 945
BmiI GGNNCC 1 cut(s) 594
BmrFI CCNGG 5 cut(s) 61, 500, 597, 1152, 1173
BmrI ACTGGG 1 cut(s) 870
BmsI GCATC 3 cut(s) 316, 771, 1522
BmtI GCTAGC 1 cut(s) 1439
BmuI ACTGGG 1 cut(s) 870
BpiI GAAGAC 1 cut(s) 1027
BplI GAGNNNNNCTC 1 cut(s) 34
BpmI CTGGAG 1 cut(s) 1194
Bpu10I CCTNAGC 1 cut(s) 651
Bpu1102I GCTNAGC 1 cut(s) 24
BpuEI CTTGAG 1 cut(s) 686
BpuMI CCSGG 1 cut(s) 61
BsaAI YACGTR 1 cut(s) 611
BsaBI GATNNNNATC 2 cut(s) 152, 1343
BsaHI GRCGYC 1 cut(s) 297
BsaJI CCNNGG 9 cut(s) 18, 59, 426, 1030, 1119, 1150, 1171, 1185, 1386
BsaWI WCCGGW 2 cut(s) 116, 391
Bsc4I CCNNNNNNNGG 4 cut(s) 60, 123, 351, 810
Bse1I ACTGG 1 cut(s) 865
Bse3DI GCAATG 8 cut(s) 336, 507, 526, 737, 1035, 1113, 1212, 1257
Bse8I GATNNNNATC 2 cut(s) 152, 1343
BseAI TCCGGA 2 cut(s) 116, 391
BseBI CCWGG 4 cut(s) 500, 597, 1152, 1173
BseDI CCNNGG 9 cut(s) 18, 59, 426, 1030, 1119, 1150, 1171, 1185, 1386
BseGI GGATG 2 cut(s) 367, 388
BseJI GATNNNNATC 2 cut(s) 152, 1343
BseLI CCNNNNNNNGG 4 cut(s) 60, 123, 351, 810
BseMI GCAATG 8 cut(s) 336, 507, 526, 737, 1035, 1113, 1212, 1257
BseMII CTCAG 2 cut(s) 15, 1599
BseNI ACTGG 1 cut(s) 865
BseRI GAGGAG 2 cut(s) 1552, 1604
BseYI CCCAGC 1 cut(s) 940
Bsh1236I CGCG 5 cut(s) 96, 533, 897, 1026, 1573
Bsh1285I CGRYCG 1 cut(s) 1577
BshFI GGCC 3 cut(s) 17, 1071, 1155
BsiEI CGRYCG 1 cut(s) 1577
BsiHKAI GWGCWC 1 cut(s) 1614
BsiHKCI CYCGRG 1 cut(s) 945
BsiSI CCGG 4 cut(s) 61, 117, 300, 392
BslFI GGGAC 1 cut(s) 1501
BslI CCNNNNNNNGG 4 cut(s) 60, 123, 351, 810
BsmAI GTCTC 1 cut(s) 1170
BsmFI GGGAC 1 cut(s) 1501
BsmI GAATGC 2 cut(s) 112, 538
BsnI GGCC 3 cut(s) 17, 1071, 1155
BsoBI CYCGRG 1 cut(s) 945
Bsp1286I GDGCHC 1 cut(s) 1614
Bsp13I TCCGGA 2 cut(s) 116, 391
Bsp143I GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
Bsp1720I GCTNAGC 1 cut(s) 24
BspANI GGCC 3 cut(s) 17, 1071, 1155
BspCNI CTCAG 2 cut(s) 16, 1600
BspEI TCCGGA 2 cut(s) 116, 391
BspFNI CGCG 5 cut(s) 96, 533, 897, 1026, 1573
BspLI GGNNCC 1 cut(s) 594
BspMAI CTGCAG 3 cut(s) 241, 832, 1594
BspOI GCTAGC 1 cut(s) 1439
BspPI GGATC 2 cut(s) 420, 689
BsrDI GCAATG 8 cut(s) 336, 507, 526, 737, 1035, 1113, 1212, 1257
BsrI ACTGG 1 cut(s) 865
BssECI CCNNGG 9 cut(s) 18, 59, 426, 1030, 1119, 1150, 1171, 1185, 1386
BssMI GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 2 cut(s) 1030, 1185
Bst2UI CCWGG 4 cut(s) 500, 597, 1152, 1173
Bst4CI ACNGT 6 cut(s) 409, 797, 964, 1099, 1123, 1465
Bst6I CTCTTC 1 cut(s) 165
BstACI GRCGYC 1 cut(s) 297
BstAPI GCANNNNNTGC 3 cut(s) 509, 836, 1214
BstBAI YACGTR 1 cut(s) 611
BstC8I GCNNGC 4 cut(s) 36, 1372, 1376, 1437
BstDEI CTNAG 3 cut(s) 24, 651, 1608
BstDSI CCRYGG 3 cut(s) 426, 1119, 1386
BstEII GGTNACC 1 cut(s) 1123
BstF5I GGATG 2 cut(s) 367, 388
BstFNI CGCG 5 cut(s) 96, 533, 897, 1026, 1573
BstH2I RGCGCY 1 cut(s) 1403
BstHHI GCGC 7 cut(s) 46, 96, 451, 535, 897, 1264, 1402
BstKTI GATC 6 cut(s) 276, 289, 415, 697, 1347, 1571
BstMAI GTCTC 1 cut(s) 1170
BstMBI GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
BstMCI CGRYCG 1 cut(s) 1577
BstMWI GCNNNNNNNGC 8 cut(s) 14, 20, 55, 509, 836, 1032, 1214, 1397
BstNI CCWGG 4 cut(s) 500, 597, 1152, 1173
BstPI GGTNACC 1 cut(s) 1123
BstSCI CCNGG 5 cut(s) 59, 498, 595, 1150, 1171
BstSFI CTRYAG 3 cut(s) 237, 828, 1590
BstUI CGCG 5 cut(s) 96, 533, 897, 1026, 1573
BstV2I GAAGAC 1 cut(s) 1027
BstX2I RGATCY 2 cut(s) 412, 694
BstXI CCANNNNNNTGG 2 cut(s) 409, 1151
BstYI RGATCY 2 cut(s) 412, 694
BsuRI GGCC 3 cut(s) 17, 1071, 1155
BtgI CCRYGG 3 cut(s) 426, 1119, 1386
BtgZI GCGATG 1 cut(s) 111
BtsCI GGATG 2 cut(s) 367, 388
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 4 cut(s) 802, 846, 1095, 1308
Cac8I GCNNGC 4 cut(s) 36, 1372, 1376, 1437
CaiI CAGNNNCTG 1 cut(s) 836
CfoI GCGC 7 cut(s) 46, 96, 451, 535, 897, 1264, 1402
CseI GACGC 3 cut(s) 305, 1015, 1032
Csp6I GTAC 1 cut(s) 280
CspCI CAANNNNNGTGG 2 cut(s) 594, 629
CviAII CATG 5 cut(s) 136, 403, 643, 712, 1534
CviQI GTAC 1 cut(s) 280
DdeI CTNAG 3 cut(s) 24, 651, 1608
DpnI GATC 6 cut(s) 275, 288, 414, 696, 1346, 1570
DpnII GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
EaeI YGGCCR 1 cut(s) 1153
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
EciI GGCGGA 1 cut(s) 731
Ecl136II GAGCTC 1 cut(s) 1612
Eco130I CCWWGG 2 cut(s) 1030, 1185
Eco147I AGGCCT 1 cut(s) 1071
Eco24I GRGCYC 1 cut(s) 1614
Eco32I GATATC 1 cut(s) 154
Eco53kI GAGCTC 1 cut(s) 1612
Eco57I CTGAAG 1 cut(s) 1284
Eco72I CACGTG 1 cut(s) 611
Eco88I CYCGRG 1 cut(s) 945
Eco91I GGTNACC 1 cut(s) 1123
EcoICRI GAGCTC 1 cut(s) 1612
EcoO65I GGTNACC 1 cut(s) 1123
EcoRII CCWGG 4 cut(s) 498, 595, 1150, 1171
EcoRV GATATC 1 cut(s) 154
EcoT14I CCWWGG 2 cut(s) 1030, 1185
EcoT38I GRGCYC 1 cut(s) 1614
ErhI CCWWGG 2 cut(s) 1030, 1185
FaeI CATG 5 cut(s) 139, 406, 646, 715, 1537
FaqI GGGAC 1 cut(s) 1501
FatI CATG 5 cut(s) 135, 402, 642, 711, 1533
FbaI TGATCA 1 cut(s) 273
FokI GGATG 2 cut(s) 374, 375
FriOI GRGCYC 1 cut(s) 1614
FspBI CTAG 2 cut(s) 998, 1436
GlaI GCGC 7 cut(s) 45, 95, 450, 534, 896, 1263, 1401
GsaI CCCAGC 1 cut(s) 944
GsuI CTGGAG 1 cut(s) 1194
HaeII RGCGCY 1 cut(s) 1403
HaeIII GGCC 3 cut(s) 17, 1071, 1155
HapII CCGG 4 cut(s) 61, 117, 300, 392
HgaI GACGC 3 cut(s) 305, 1015, 1032
HhaI GCGC 7 cut(s) 46, 96, 451, 535, 897, 1264, 1402
Hin1I GRCGYC 1 cut(s) 297
Hin1II CATG 5 cut(s) 139, 406, 646, 715, 1537
Hin6I GCGC 7 cut(s) 44, 94, 449, 533, 895, 1262, 1400
HinP1I GCGC 7 cut(s) 44, 94, 449, 533, 895, 1262, 1400
HindIII AAGCTT 1 cut(s) 879
HinfI GANTC 4 cut(s) 303, 661, 1253, 1604
HpaII CCGG 4 cut(s) 61, 117, 300, 392
HphI GGTGA 4 cut(s) 157, 481, 976, 1117
Hpy166II GTNNAC 3 cut(s) 472, 820, 988
Hpy188I TCNGA 7 cut(s) 214, 756, 871, 1066, 1518, 1603, 1609
Hpy188III TCNNGA 7 cut(s) 117, 129, 392, 665, 904, 947, 1315
Hpy8I GTNNAC 3 cut(s) 472, 820, 988
HpyAV CCTTC 7 cut(s) 178, 616, 708, 751, 1058, 1061, 1240
HpyCH4III ACNGT 6 cut(s) 409, 797, 964, 1099, 1123, 1465
HpyCH4IV ACGT 2 cut(s) 610, 1161
HpyF10VI GCNNNNNNNGC 8 cut(s) 14, 20, 55, 509, 836, 1032, 1214, 1397
HpyF3I CTNAG 3 cut(s) 24, 651, 1608
HpySE526I ACGT 2 cut(s) 610, 1161
Hsp92I GRCGYC 1 cut(s) 297
Hsp92II CATG 5 cut(s) 139, 406, 646, 715, 1537
HspAI GCGC 7 cut(s) 44, 94, 449, 533, 895, 1262, 1400
Kpn2I TCCGGA 2 cut(s) 116, 391
Ksp22I TGATCA 1 cut(s) 273
Kzo9I GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
LmnI GCTCC 6 cut(s) 119, 592, 676, 1222, 1539, 1617
LweI GCATC 3 cut(s) 316, 771, 1522
MaeI CTAG 2 cut(s) 998, 1436
MaeII ACGT 2 cut(s) 610, 1161
MaeIII GTNAC 4 cut(s) 968, 1123, 1194, 1447
MalI GATC 6 cut(s) 275, 288, 414, 696, 1346, 1570
MboI GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
MfeI CAATTG 1 cut(s) 1440
MflI RGATCY 2 cut(s) 412, 694
MhlI GDGCHC 1 cut(s) 1614
MlsI TGGCCA 1 cut(s) 1155
MluCI AATT 5 cut(s) 395, 1137, 1440, 1467, 1644
MluI ACGCGT 1 cut(s) 1024
MluNI TGGCCA 1 cut(s) 1155
MlyI GAGTC 1 cut(s) 1247
MmeI TCCRAC 2 cut(s) 462, 1539
Mox20I TGGCCA 1 cut(s) 1155
MroI TCCGGA 2 cut(s) 116, 391
MscI TGGCCA 1 cut(s) 1155
MseI TTAA 2 cut(s) 687, 876
MslI CAYNNNNRTG 3 cut(s) 140, 407, 1100
Msp20I TGGCCA 1 cut(s) 1155
MspA1I CMGCKG 1 cut(s) 443
MspI CCGG 4 cut(s) 61, 117, 300, 392
MspR9I CCNGG 5 cut(s) 61, 500, 597, 1152, 1173
MunI CAATTG 1 cut(s) 1440
Mva1269I GAATGC 2 cut(s) 112, 538
MvaI CCWGG 4 cut(s) 500, 597, 1152, 1173
MvnI CGCG 5 cut(s) 96, 533, 897, 1026, 1573
MwoI GCNNNNNNNGC 8 cut(s) 14, 20, 55, 509, 836, 1032, 1214, 1397
NciI CCSGG 1 cut(s) 61
NdeII GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
NheI GCTAGC 1 cut(s) 1435
NlaIII CATG 5 cut(s) 139, 406, 646, 715, 1537
NlaIV GGNNCC 1 cut(s) 594
NmeAIII GCCGAG 1 cut(s) 877
NmuCI GTSAC 3 cut(s) 968, 1123, 1194
OliI CACNNNNGTG 1 cut(s) 1100
PaeR7I CTCGAG 1 cut(s) 945
PceI AGGCCT 1 cut(s) 1071
PctI GAATGC 2 cut(s) 112, 538
PfeI GAWTC 3 cut(s) 303, 661, 1604
PleI GAGTC 1 cut(s) 1247
PmaCI CACGTG 1 cut(s) 611
PmlI CACGTG 1 cut(s) 611
PpsI GAGTC 1 cut(s) 1247
Ppu21I YACGTR 1 cut(s) 611
Psp124BI GAGCTC 1 cut(s) 1614
Psp6I CCWGG 4 cut(s) 498, 595, 1150, 1171
PspCI CACGTG 1 cut(s) 611
PspEI GGTNACC 1 cut(s) 1123
PspFI CCCAGC 1 cut(s) 940
PspGI CCWGG 4 cut(s) 498, 595, 1150, 1171
PspN4I GGNNCC 1 cut(s) 594
PstI CTGCAG 3 cut(s) 241, 832, 1594
PstNI CAGNNNCTG 1 cut(s) 836
PsuI RGATCY 2 cut(s) 412, 694
PvuII CAGCTG 1 cut(s) 443
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
RseI CAYNNNNRTG 3 cut(s) 140, 407, 1100
SacI GAGCTC 1 cut(s) 1614
SaqAI TTAA 2 cut(s) 687, 876
Sau3AI GATC 6 cut(s) 273, 286, 412, 694, 1344, 1568
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 1 cut(s) 1247
ScrFI CCNGG 5 cut(s) 61, 500, 597, 1152, 1173
SduI GDGCHC 1 cut(s) 1614
SfaNI GCATC 3 cut(s) 316, 771, 1522
SfcI CTRYAG 3 cut(s) 237, 828, 1590
Sfr274I CTCGAG 1 cut(s) 945
SlaI CTCGAG 1 cut(s) 945
SmiMI CAYNNNNRTG 3 cut(s) 140, 407, 1100
SmlI CTYRAG 2 cut(s) 665, 945
SmoI CTYRAG 2 cut(s) 665, 945
Sse9I AATT 5 cut(s) 395, 1137, 1440, 1467, 1644
SseBI AGGCCT 1 cut(s) 1071
SspMI CTAG 2 cut(s) 998, 1436
SstI GAGCTC 1 cut(s) 1614
StuI AGGCCT 1 cut(s) 1071
StyD4I CCNGG 5 cut(s) 59, 498, 595, 1150, 1171
StyI CCWWGG 2 cut(s) 1030, 1185
TaaI ACNGT 6 cut(s) 409, 797, 964, 1099, 1123, 1465
TaiI ACGT 2 cut(s) 613, 1164
TaqI TCGA 5 cut(s) 462, 789, 946, 1251, 1314
TasI AATT 5 cut(s) 395, 1137, 1440, 1467, 1644
TatI WGTACW 1 cut(s) 279
TauI GCSGC 7 cut(s) 17, 34, 41, 44, 449, 548, 650
TfiI GAWTC 3 cut(s) 303, 661, 1604
Tru1I TTAA 2 cut(s) 687, 876
Tru9I TTAA 2 cut(s) 687, 876
TscAI CASTG 4 cut(s) 802, 853, 1102, 1308
TseFI GTSAC 3 cut(s) 968, 1123, 1194
Tsp45I GTSAC 3 cut(s) 968, 1123, 1194
TspDTI ATGAA 4 cut(s) 231, 1222, 1234, 1258
TspGWI ACGGA 1 cut(s) 1375
TspRI CASTG 4 cut(s) 802, 853, 1102, 1308
XhoI CTCGAG 1 cut(s) 945
XspI CTAG 2 cut(s) 998, 1436
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.