Rh5BG422800

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0011729
Physical Location & Seq
Reverse (-)
68263677 .. 68265889
2213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG422800.1

Sequence Viewer

Length: 1668 bp
ATGGAGGCAGAGACACCAAAATCTGAGCAGTCGCCGCCGGAGCAGCCACCGGCAGGGCAGCGAAGCTTGCCGAGGAAGAAAATGACAAAGCAGTTAACCGGAAAGCGCGATGATACACCTTTGCATTCTGCTGCGAGGTCAGGGAATATGGCTGTGGTGAAAGATATCCTTGAGAATACAGGAGAGGAAGAGTTGAAGGAATTATTGGCCAAGCAAAATTCTTCTGCTGAGACACCCTTGTATGTTGCTTCGGAATATGGTTATGTCGATTTGGTCAGAGAGATGATTAAATACTATGATCTTGCTACCGCTGGAGTCAAAGCGCGAAATGGGTTTGATGCATTGCACATTGCTGCCAAACAAGGGGATATGGATGTGTTGAAAATCCTTATGGATGCTCATCCAGAATTGACTATGACCGTGGATCTTTCAAACACCACGGCTTTGCACACGGCTGCAAACCAAGGGCATATTGAGGTTGTGAACTTTCTATTGGAAGCAGGGAGCAGCCTGGCAACCATTGCTCGAAGCAATGGCAAAACCGCGCTGCATTCTGCAGCAAGAAATGGTCATTTGGAGGTTATGAAAGCGCTTCTCGAAAAGGAGCCTGGTATTGCAACTCGTACCGATAAGAAGGGGCAGACTGCACTTCATATGGCAGCAAAGGGGCAGAATCTTGAGGTGGTGGAGTTGTTGATTAATGCGGATTCTGCATTGATAAATATGTGTGATAATAAAGAAAACACAGCATTGCATATAGCTACTCGAAAGGGTAGAACTGAGATTGTTAAGATGCTTCTCCAACACAGTGAAACAGAGGTAAAAACAATTAACAAGTCCTCAGAAACTGCCCTCGACACTGCAGAGAAAACCGGGAACTCTGATATCAAAGCCCTTCTGCAGGAGCATGGTGTCCAGAGTGCTAAAGATCTCAGGCCACAACCAAAAAACCCAGCTCGAGAGCTGAAACAAACCGTGAGTGACATAAAACACGAAGTCCACCACCAGCTAGAACACACTCGTCAAACAAGAAGACGCGTCCAAGGCATTGCCAAACGCCTTCACAAAATGCACACAGAAGGCCTCAACAATGCCATAAACTCCAACACTGTAGTTGCTGTCCTCATTGCCACCGTCACCTTTGCAGGCATTTTCCAGATCCCTGGACAGTGGATTGATGACCCCAAAGAAATTCCTGACGGGATGTCACTTGGTGAAGCCAAAATTGCTAACCAAACCGCCTTTAAAGTCTTCTTCGTCTTCAATGCAATTGCCCTTTTCATCTCTCTGGCTGTTGTGGTGGTGCAGACTTCAGTTGTGGTAATCGAGAGCAAAGCAAAGAGGCACATGATGGCAATCATTAACAAGCTAATGTGGTTCGCTTGTGTGAATCTCTCCGTGGCATTCTTAGCACTCTCTTTTGTTGTGGTAGGAGCAGATGAAAAGTGGCTTGCAATTGGCGTAACCATTATTGGAACGGTAATAATGATTGGAACTTTGGGGACTATGTGTTTCTGGATAGTTAGGCATCGGATGGAGGCCAAAAGTTCGAGAACGGTACGAAGAAATTCGATAGGAAGCCAGCAGTCAAAATCATGGTCTTTGTCTGCAGTTATGTCTGAATCTGAGCTCCTGAACAACGAGTTTAAGAAGATGTATGCAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

555

Amino Acids

61.0

Weight (kDa)

8.92

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 35 - 98 1.9e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 106 - 170 3.5e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 115 - 165 5.9e-08 Ankyrin repeats (many copies)
Ank_4 PF13637 149 - 199 7.2e-11 Ankyrin repeats (many copies)
Ank_2 PF12796 177 - 235 1.4e-14 Ankyrin repeats (3 copies)
Ank PF00023 178 - 201 9.1e-06 Ankyrin repeat
Ank_4 PF13637 183 - 233 1.5e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 198 - 254 2e-09 Ankyrin repeats (many copies)
Ank PF00023 213 - 245 1.5e-06 Ankyrin repeat
Ank_2 PF12796 240 - 305 6.6e-09 Ankyrin repeats (3 copies)
PGG PF13962 360 - 476 5e-28 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07710 AT1G07710 AT5G60070
fragaria_vesca FvH4_3g34650 FvH4_3g34650
malus_domestica MD03G1103100.v1.1 MD11G1116700.v1.1
prunus_persica Prupe.6G087100_v2.0.a1
pyrus_communis pycom03g08370 pycom11g09810
rosa_chinensis RchiOBHm_Chr5g0062351
rosa_laevigata RLG00000035552
rosa_multiflora Rmu_sc0010221.1_g000002
rosa_roxburghii Rroxscaffold_1G00018330
rosa_rugosa Rorug05G0348900
rosa_samantha Rh5BG422800 Rh5CG446800 Rh5DG437600
rosa_wichuraiana Rw5G038520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 4 cut(s) 108, 325, 545, 1038
AciI CCGC 5 cut(s) 35, 309, 543, 704, 1239
AclWI GGATC 2 cut(s) 432, 1153
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 3 cut(s) 217, 1191, 1567
AcuI CTGAAG 1 cut(s) 1296
AdeI CACNNNGTG 1 cut(s) 1214
AfaI GTAC 2 cut(s) 625, 1560
AfeI AGCGCT 1 cut(s) 591
AfiI CCNNNNNNNGG 3 cut(s) 53, 363, 901
AflIII ACRYGT 1 cut(s) 1036
AgsI TTSAA 4 cut(s) 196, 382, 432, 1264
AhdI GACNNNNNGTC 1 cut(s) 1204
AjnI CCWGG 3 cut(s) 510, 607, 1162
AjuI GAANNNNNNNTTGG 4 cut(s) 188, 220, 476, 508
AluBI AGCT 7 cut(s) 66, 761, 956, 964, 1009, 1369, 1630
AluI AGCT 7 cut(s) 66, 761, 956, 964, 1009, 1369, 1630
Alw21I GWGCWC 1 cut(s) 1632
Alw26I GTCTC 2 cut(s) 5, 224
AlwI GGATC 2 cut(s) 432, 1153
AlwNI CAGNNNCTG 1 cut(s) 848
Ama87I CYCGRG 1 cut(s) 957
Aor51HI AGCGCT 1 cut(s) 591
AoxI GGCC 4 cut(s) 207, 935, 1081, 1539
ApeKI GCWGC 9 cut(s) 43, 58, 131, 353, 455, 507, 547, 557, 659
ApoI RAATTY 3 cut(s) 217, 1191, 1567
ArsI GACNNNNNNTTYG 2 cut(s) 1583, 1615
AseI ATTAAT 1 cut(s) 699
Asp700I GAANNNNTTC 1 cut(s) 1567
AspLEI GCGC 4 cut(s) 108, 325, 547, 592
AsuC2I CCSGG 1 cut(s) 874
AsuHPI GGTGA 3 cut(s) 169, 1129, 1226
AvaI CYCGRG 1 cut(s) 957
BalI TGGCCA 1 cut(s) 209
BanII GRGCYC 1 cut(s) 1632
BbsI GAAGAC 3 cut(s) 1039, 1243, 1252
Bbv12I GWGCWC 1 cut(s) 1632
BbvI GCAGC 9 cut(s) 55, 70, 118, 340, 442, 519, 534, 569, 671
BccI CCATC 2 cut(s) 1345, 1528
BceAI ACGGC 2 cut(s) 456, 468
BciT130I CCWGG 3 cut(s) 512, 609, 1164
BcnI CCSGG 1 cut(s) 874
BcoDI GTCTC 2 cut(s) 5, 224
BfaI CTAG 1 cut(s) 1010
BfmI CTRYAG 5 cut(s) 555, 861, 899, 1110, 1608
BfoI RGCGCY 1 cut(s) 593
BglII AGATCT 1 cut(s) 928
Bme1390I CCNGG 4 cut(s) 512, 609, 874, 1164
BmeRI GACNNNNNGTC 1 cut(s) 1204
BmeT110I CYCGRG 1 cut(s) 957
BmiI GGNNCC 1 cut(s) 606
BmrFI CCNGG 4 cut(s) 512, 609, 874, 1164
BmsI GCATC 4 cut(s) 328, 385, 783, 1537
BpiI GAAGAC 3 cut(s) 1039, 1243, 1252
BpmI CTGGAG 1 cut(s) 333
BpuEI CTTGAG 2 cut(s) 191, 698
BpuMI CCSGG 1 cut(s) 874
BsaBI GATNNNNATC 2 cut(s) 399, 1355
BsaJI CCNNGG 7 cut(s) 71, 420, 438, 463, 1042, 1162, 1398
BsaWI WCCGGW 1 cut(s) 98
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 363, 901
Bse118I RCCGGY 1 cut(s) 49
Bse3DI GCAATG 7 cut(s) 341, 348, 519, 538, 749, 1047, 1125
Bse8I GATNNNNATC 2 cut(s) 399, 1355
BseBI CCWGG 3 cut(s) 512, 609, 1164
BseDI CCNNGG 7 cut(s) 71, 420, 438, 463, 1042, 1162, 1398
BseGI GGATG 5 cut(s) 379, 400, 400, 1209, 1539
BseJI GATNNNNATC 2 cut(s) 399, 1355
BseLI CCNNNNNNNGG 3 cut(s) 53, 363, 901
BseMI GCAATG 7 cut(s) 341, 348, 519, 538, 749, 1047, 1125
BseMII CTCAG 6 cut(s) 15, 219, 771, 855, 946, 1617
BseXI GCAGC 9 cut(s) 55, 70, 118, 340, 442, 519, 534, 569, 671
BseYI CCCAGC 1 cut(s) 952
BsgI GTGCAG 2 cut(s) 630, 1325
Bsh1236I CGCG 4 cut(s) 108, 325, 545, 1038
BshFI GGCC 4 cut(s) 209, 937, 1083, 1541
BsiHKAI GWGCWC 1 cut(s) 1632
BsiHKCI CYCGRG 1 cut(s) 957
BsiSI CCGG 4 cut(s) 38, 50, 99, 873
BslFI GGGAC 1 cut(s) 1516
BslI CCNNNNNNNGG 3 cut(s) 53, 363, 901
BsmAI GTCTC 2 cut(s) 5, 224
BsmFI GGGAC 1 cut(s) 1516
BsmI GAATGC 3 cut(s) 124, 550, 1403
BsnI GGCC 4 cut(s) 209, 937, 1083, 1541
BsoBI CYCGRG 1 cut(s) 957
Bsp1286I GDGCHC 1 cut(s) 1632
Bsp143I GATC 4 cut(s) 298, 424, 928, 1158
BspACI CCGC 5 cut(s) 35, 309, 543, 704, 1239
BspANI GGCC 4 cut(s) 209, 937, 1083, 1541
BspCNI CTCAG 6 cut(s) 16, 220, 772, 854, 945, 1618
BspFNI CGCG 4 cut(s) 108, 325, 545, 1038
BspLI GGNNCC 1 cut(s) 606
BspMAI CTGCAG 4 cut(s) 559, 865, 903, 1612
BspPI GGATC 2 cut(s) 432, 1153
BsrDI GCAATG 7 cut(s) 341, 348, 519, 538, 749, 1047, 1125
BsrFI RCCGGY 1 cut(s) 49
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 7 cut(s) 71, 420, 438, 463, 1042, 1162, 1398
BssMI GATC 4 cut(s) 298, 424, 928, 1158
BssT1I CCWWGG 2 cut(s) 463, 1042
Bst2UI CCWGG 3 cut(s) 512, 609, 1164
Bst4CI ACNGT 8 cut(s) 421, 809, 976, 1111, 1135, 1170, 1480, 1558
Bst6I CTCTTC 1 cut(s) 183
BstAPI GCANNNNNTGC 1 cut(s) 521
BstC8I GCNNGC 4 cut(s) 68, 1147, 1452, 1583
BstDEI CTNAG 7 cut(s) 24, 228, 780, 841, 932, 1408, 1626
BstDSI CCRYGG 3 cut(s) 420, 438, 1398
BstENI CCTNNNNNAGG 1 cut(s) 899
BstF5I GGATG 5 cut(s) 379, 400, 400, 1209, 1539
BstFNI CGCG 4 cut(s) 108, 325, 545, 1038
BstH2I RGCGCY 1 cut(s) 593
BstHHI GCGC 4 cut(s) 108, 325, 547, 592
BstKTI GATC 4 cut(s) 301, 427, 931, 1161
BstMAI GTCTC 2 cut(s) 5, 224
BstMBI GATC 4 cut(s) 298, 424, 928, 1158
BstMWI GCNNNNNNNGC 9 cut(s) 34, 40, 43, 67, 521, 710, 1044, 1226, 1409
BstNI CCWGG 3 cut(s) 512, 609, 1164
BstSCI CCNGG 4 cut(s) 510, 607, 872, 1162
BstSFI CTRYAG 5 cut(s) 555, 861, 899, 1110, 1608
BstUI CGCG 4 cut(s) 108, 325, 545, 1038
BstV1I GCAGC 9 cut(s) 55, 70, 118, 340, 442, 519, 534, 569, 671
BstV2I GAAGAC 3 cut(s) 1039, 1243, 1252
BstX2I RGATCY 3 cut(s) 424, 928, 1158
BstXI CCANNNNNNTGG 1 cut(s) 1163
BstYI RGATCY 3 cut(s) 424, 928, 1158
BsuRI GGCC 4 cut(s) 209, 937, 1083, 1541
BtgI CCRYGG 3 cut(s) 420, 438, 1398
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 5 cut(s) 379, 400, 400, 1209, 1539
BtsI GCAGTG 1 cut(s) 858
BtsIMutI CAGTG 4 cut(s) 814, 858, 1107, 1175
Cac8I GCNNGC 4 cut(s) 68, 1147, 1452, 1583
CaiI CAGNNNCTG 1 cut(s) 848
CfoI GCGC 4 cut(s) 108, 325, 547, 592
Cfr10I RCCGGY 1 cut(s) 49
CseI GACGC 2 cut(s) 1027, 1044
Csp6I GTAC 2 cut(s) 624, 1559
CviAII CATG 3 cut(s) 908, 1348, 1596
CviQI GTAC 2 cut(s) 624, 1559
DdeI CTNAG 7 cut(s) 24, 228, 780, 841, 932, 1408, 1626
DpnI GATC 4 cut(s) 300, 426, 930, 1160
DpnII GATC 4 cut(s) 298, 424, 928, 1158
DraI TTTAAA 1 cut(s) 1246
DraIII CACNNNGTG 1 cut(s) 1214
DriI GACNNNNNGTC 1 cut(s) 1204
EaeI YGGCCR 1 cut(s) 207
Eam1104I CTCTTC 1 cut(s) 183
Eam1105I GACNNNNNGTC 1 cut(s) 1204
EarI CTCTTC 1 cut(s) 183
Ecl136II GAGCTC 1 cut(s) 1630
Eco130I CCWWGG 2 cut(s) 463, 1042
Eco147I AGGCCT 1 cut(s) 1083
Eco24I GRGCYC 1 cut(s) 1632
Eco32I GATATC 2 cut(s) 166, 886
Eco47III AGCGCT 1 cut(s) 591
Eco53kI GAGCTC 1 cut(s) 1630
Eco57I CTGAAG 1 cut(s) 1296
Eco88I CYCGRG 1 cut(s) 957
EcoICRI GAGCTC 1 cut(s) 1630
EcoNI CCTNNNNNAGG 1 cut(s) 899
EcoRII CCWGG 3 cut(s) 510, 607, 1162
EcoRV GATATC 2 cut(s) 166, 886
EcoT14I CCWWGG 2 cut(s) 463, 1042
EcoT22I ATGCAT 1 cut(s) 343
EcoT38I GRGCYC 1 cut(s) 1632
ErhI CCWWGG 2 cut(s) 463, 1042
FaeI CATG 3 cut(s) 911, 1351, 1599
FalI AAGNNNNNCTT 2 cut(s) 153, 185
FaqI GGGAC 1 cut(s) 1516
FatI CATG 3 cut(s) 907, 1347, 1595
FauNDI CATATG 1 cut(s) 654
FokI GGATG 5 cut(s) 386, 387, 407, 1216, 1546
FriOI GRGCYC 1 cut(s) 1632
FspBI CTAG 1 cut(s) 1010
GlaI GCGC 4 cut(s) 107, 324, 546, 591
GsaI CCCAGC 1 cut(s) 956
GsuI CTGGAG 1 cut(s) 333
HaeII RGCGCY 1 cut(s) 593
HaeIII GGCC 4 cut(s) 209, 937, 1083, 1541
HapII CCGG 4 cut(s) 38, 50, 99, 873
HgaI GACGC 2 cut(s) 1027, 1044
HhaI GCGC 4 cut(s) 108, 325, 547, 592
Hin1II CATG 3 cut(s) 911, 1351, 1599
Hin6I GCGC 4 cut(s) 106, 323, 545, 590
HinP1I GCGC 4 cut(s) 106, 323, 545, 590
HincII GTYRAC 1 cut(s) 96
HindII GTYRAC 1 cut(s) 96
HindIII AAGCTT 1 cut(s) 64
HinfI GANTC 5 cut(s) 315, 673, 707, 1390, 1622
HpaI GTTAAC 1 cut(s) 96
HpaII CCGG 4 cut(s) 38, 50, 99, 873
HphI GGTGA 3 cut(s) 169, 1129, 1226
Hpy166II GTNNAC 3 cut(s) 96, 484, 1000
Hpy188I TCNGA 8 cut(s) 25, 253, 278, 844, 883, 1533, 1621, 1627
Hpy8I GTNNAC 3 cut(s) 96, 484, 1000
HpyAV CCTTC 5 cut(s) 190, 628, 905, 1070, 1073
HpyCH4III ACNGT 8 cut(s) 421, 809, 976, 1111, 1135, 1170, 1480, 1558
HpyF10VI GCNNNNNNNGC 9 cut(s) 34, 40, 43, 67, 521, 710, 1044, 1226, 1409
HpyF3I CTNAG 7 cut(s) 24, 228, 780, 841, 932, 1408, 1626
Hsp92II CATG 3 cut(s) 911, 1351, 1599
HspAI GCGC 4 cut(s) 106, 323, 545, 590
KspAI GTTAAC 1 cut(s) 96
Kzo9I GATC 4 cut(s) 298, 424, 928, 1158
LmnI GCTCC 6 cut(s) 40, 504, 604, 904, 1433, 1635
Lsp1109I GCAGC 9 cut(s) 55, 70, 118, 340, 442, 519, 534, 569, 671
LweI GCATC 4 cut(s) 328, 385, 783, 1537
MaeI CTAG 1 cut(s) 1010
MaeIII GTNAC 4 cut(s) 980, 1135, 1206, 1462
MalI GATC 4 cut(s) 300, 426, 930, 1160
MboI GATC 4 cut(s) 298, 424, 928, 1158
MboII GAAGA 9 cut(s) 88, 200, 213, 1044, 1243, 1246, 1252, 1575, 1663
MfeI CAATTG 2 cut(s) 1269, 1455
MflI RGATCY 3 cut(s) 424, 928, 1158
MhlI GDGCHC 1 cut(s) 1632
MlsI TGGCCA 1 cut(s) 209
MluCI AATT 9 cut(s) 200, 217, 407, 828, 1191, 1224, 1269, 1455, 1567
MluI ACGCGT 1 cut(s) 1036
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 1 cut(s) 324
MmeI TCCRAC 2 cut(s) 826, 1128
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 1 cut(s) 343
MroXI GAANNNNTTC 1 cut(s) 1567
MscI TGGCCA 1 cut(s) 209
MseI TTAA 8 cut(s) 95, 288, 699, 789, 831, 1245, 1362, 1647
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 311
MspI CCGG 4 cut(s) 38, 50, 99, 873
MspR9I CCNGG 4 cut(s) 512, 609, 874, 1164
MunI CAATTG 2 cut(s) 1269, 1455
Mva1269I GAATGC 3 cut(s) 124, 550, 1403
MvaI CCWGG 3 cut(s) 512, 609, 1164
MvnI CGCG 4 cut(s) 108, 325, 545, 1038
MwoI GCNNNNNNNGC 9 cut(s) 34, 40, 43, 67, 521, 710, 1044, 1226, 1409
NciI CCSGG 1 cut(s) 874
NdeI CATATG 1 cut(s) 654
NdeII GATC 4 cut(s) 298, 424, 928, 1158
NlaIII CATG 3 cut(s) 911, 1351, 1599
NlaIV GGNNCC 1 cut(s) 606
NmeAIII GCCGAG 1 cut(s) 96
NmuCI GTSAC 3 cut(s) 980, 1135, 1206
NsiI ATGCAT 1 cut(s) 343
PaeR7I CTCGAG 1 cut(s) 957
PceI AGGCCT 1 cut(s) 1083
PctI GAATGC 3 cut(s) 124, 550, 1403
PdmI GAANNNNTTC 1 cut(s) 1567
PfeI GAWTC 4 cut(s) 673, 707, 1390, 1622
PleI GAGTC 1 cut(s) 323
PpsI GAGTC 1 cut(s) 323
PshBI ATTAAT 1 cut(s) 699
Psp124BI GAGCTC 1 cut(s) 1632
Psp6I CCWGG 3 cut(s) 510, 607, 1162
PspFI CCCAGC 1 cut(s) 952
PspGI CCWGG 3 cut(s) 510, 607, 1162
PspN4I GGNNCC 1 cut(s) 606
PstI CTGCAG 4 cut(s) 559, 865, 903, 1612
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 3 cut(s) 424, 928, 1158
RsaI GTAC 2 cut(s) 625, 1560
RsaNI GTAC 2 cut(s) 624, 1559
SacI GAGCTC 1 cut(s) 1632
SaqAI TTAA 8 cut(s) 95, 288, 699, 789, 831, 1245, 1362, 1647
Sau3AI GATC 4 cut(s) 298, 424, 928, 1158
SchI GAGTC 1 cut(s) 324
ScrFI CCNGG 4 cut(s) 512, 609, 874, 1164
SduI GDGCHC 1 cut(s) 1632
SfaNI GCATC 4 cut(s) 328, 385, 783, 1537
SfcI CTRYAG 5 cut(s) 555, 861, 899, 1110, 1608
Sfr274I CTCGAG 1 cut(s) 957
SlaI CTCGAG 1 cut(s) 957
SmlI CTYRAG 3 cut(s) 170, 677, 957
SmoI CTYRAG 3 cut(s) 170, 677, 957
Sse9I AATT 9 cut(s) 200, 217, 407, 828, 1191, 1224, 1269, 1455, 1567
SseBI AGGCCT 1 cut(s) 1083
SsiI CCGC 5 cut(s) 35, 309, 543, 704, 1239
SspMI CTAG 1 cut(s) 1010
SstI GAGCTC 1 cut(s) 1632
StuI AGGCCT 1 cut(s) 1083
StyD4I CCNGG 4 cut(s) 510, 607, 872, 1162
StyI CCWWGG 2 cut(s) 463, 1042
TaaI ACNGT 8 cut(s) 421, 809, 976, 1111, 1135, 1170, 1480, 1558
TaqI TCGA 9 cut(s) 267, 526, 597, 766, 855, 958, 1326, 1550, 1571
TasI AATT 9 cut(s) 200, 217, 407, 828, 1191, 1224, 1269, 1455, 1567
TauI GCSGC 1 cut(s) 37
TfiI GAWTC 4 cut(s) 673, 707, 1390, 1622
Tru1I TTAA 8 cut(s) 95, 288, 699, 789, 831, 1245, 1362, 1647
Tru9I TTAA 8 cut(s) 95, 288, 699, 789, 831, 1245, 1362, 1647
TscAI CASTG 4 cut(s) 814, 865, 1114, 1175
TseFI GTSAC 3 cut(s) 980, 1135, 1206
TseI GCWGC 9 cut(s) 43, 58, 131, 353, 455, 507, 547, 557, 659
Tsp45I GTSAC 3 cut(s) 980, 1135, 1206
TspDTI ATGAA 4 cut(s) 599, 641, 1270, 1455
TspGWI ACGGA 1 cut(s) 1387
TspRI CASTG 4 cut(s) 814, 865, 1114, 1175
VspI ATTAAT 1 cut(s) 699
XagI CCTNNNNNAGG 1 cut(s) 899
XapI RAATTY 3 cut(s) 217, 1191, 1567
XhoI CTCGAG 1 cut(s) 957
XmnI GAANNNNTTC 1 cut(s) 1567
XspI CTAG 1 cut(s) 1010
Zsp2I ATGCAT 1 cut(s) 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.