Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013174

Physical Location & Seq

Genomic Coordinates Forward (+)

4351019 .. 4353797

Gene Structure 2779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G12770.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGCGGCATCAACTTCAACCCGATTCCTTGTTCTGCTCAAAGATTTTTCTGCCTTCAGAAAGATATCATGGACTTGTGCTGCAACTAATTTTCACCGCCAATCTCGTTTTTTATGCCATGTTGCGAAAGAAGACGGGTCTCTTACTCTTGCAAGCCTTGATTTGGGGAACAAACCACGGAAATTTGGGAAGGGTAAGGCGATGAAGCTTGAGGGAAGTTTTGTTACTGAAATGGGTCAAGGTAAGGTAAGAGCGGTAAAGAACGATAAAATGAAAGTTGTCAAGGAAAAAAAGCCAGCTGAGATAGTGTCTCCTTTGTTTTCTGCAAAATCCTTTGAGGAGCTTGGCCTCCCGGATTCCTTGTTAGACAGTTTGGAAAGAGAAGGTTTCTCTGTCCCAACAGATGTCCAATCAGCAGCTGTCCCGGCAATAATCAAAGGTCACGATGCAGTGATTCAGTCTTACACAGGATCTGGCAAAACATTAGCTTATCTGCTTCCAATATTGTCCGAAATTGGTCCTCTAGCAGAAAAATCTAGAAGTTCGCACAGTGAAAATGATAAGAGGACTGAGATTCAGGCAATGATCGTGGCTCCATCAAGAGAACTCGGTATGCAGATAGTAAGAGAGGTAGAGAAACTGCTCGGACCTGTTCACCGTAGAATGGTTCAGCAGTTGGTAGGAGGTGCAAACCGAATGAGGCAAGAAGAGGCCCTTAAGAAAAATAAACCTGCAATTGTTGTTGGCACTCCCGGGAGAATTGCAGAGATAAGCAAAGGTGGAAAATTGCACACTCATGGGTGTAGATTCTTGGTGCTAGACGAAGTCGATGAGCTTTTATCGTTTAATTTCCGAGAAGATATCCATCGAATACTAGAACATGTAGGAAAGAGATCTGGGGCTGGTCCTAAAGGAGAAGTCGATGAACGGGCTAACCGGCAGACCATTCTAGTCTCTGCAACTGTGCCATTCTCGGTTATCCGAGCAGCTAAAAGCTGGAGTCACGAGCCGGTTCTTGTCCAAGCCAACAAAGTCACTCCTCTTGATACCGTTCAACCATCTGCACCGGTAATGAGCTTGACTCCCACAACTTCTGAAGCTGATGGCCAGATTCAGACTACTATTCAGAGCTTACCTCCAGCTTTAAAACACTATTACTGCATCTCAAAGCATCAACACAAAGTCGACACGTTAAGGAGATGCGTTCACGCCCTCGATGCCCAATCGGTTATAGCTTTCATGAACCACTCAAGGCAGCTCAAAGATGTGGTCTACAAACTCGAAGCTCGTGGTATGAATTCAGCTGAGATGCACGGAGATCTCGGGAAGCTAGGGAGATCAACAGTTCTAAAGAAGTTCAAGAACGGGGAAATCAAGGTACTTGTGACAAACGAGCTCTCTGCCCGGGGTCTGGATGTTGCGGAATGTGATCTGGTGGTGAATCTTGAGCTTCCAACTGATGCGGTTCACTATGCTCATCGAGCTGGGAGAACAGGGAGGCTGGGAAGGAAAGGGACGGTGGTAACAGTGTGCGAGGAATCACAAGTGTTTATAGTGAAGAAGATGGAGAAGCAGCTTGGTTTGCCTTTCTTGTATTGTGAGTTTGTTGATGGAGAGCTTGTTGTCACTGAGGAAGATAAAGCTATTATAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009663 GO:0009987 GO:0010496 GO:0010497 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034330 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045216 GO:0046483 GO:0051179 GO:0051234 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

551

Amino Acids

60.72

Weight (kDa)

9.3

Isoelectric Point (pI)

37.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	134 - 326	6.5e-39	DEAD/DEAH box helicase
Helicase_C	PF00271	394 - 502	6e-21	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12770 AT1G12770
fragaria_vesca	FvH4_2g15280 FvH4_2g15280 FvH4_2g15280
malus_domestica	MD10G1007800.v1.1
prunus_persica	Prupe.8G011400_v2.0.a1
pyrus_communis	pycom10g00490
rosa_chinensis	RchiOBHm_Chr6g0278021
rosa_laevigata	RLG00000013248
rosa_multiflora	Rmu_co8373311.1_g000001
rosa_roxburghii	Rroxscaffold_7G00190590
rosa_rugosa	Rorug06G0114100.1
rosa_samantha	Rh6AG223800 Rh6BG227900 Rh6CG230400 Rh6DG221400
rosa_wichuraiana	Rw6G019550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1649
Acc36I	ACCTGC	1 cut(s)	739
AccBSI	CCGCTC	1 cut(s)	254
AccI	GTMKAC	2 cut(s)	1185, 1272
AciI	CCGC	5 cut(s)	5, 97, 254, 1421, 1463
AclWI	GGATC	1 cut(s)	478
AcoI	YGGCCR	1 cut(s)	1105
AcsI	RAATTY	2 cut(s)	182, 1297
AcuI	CTGAAG	2 cut(s)	40, 1116
AfaI	GTAC	1 cut(s)	1380
AfiI	CCNNNNNNNGG	3 cut(s)	163, 664, 1411
AflII	CTTAAG	1 cut(s)	716
AflIII	ACRYGT	2 cut(s)	880, 1188
AgeI	ACCGGT	1 cut(s)	1066
AgsI	TTSAA	3 cut(s)	18, 1055, 1360
Alw21I	GWGCWC	1 cut(s)	1398
Alw26I	GTCTC	3 cut(s)	144, 315, 958
AlwI	GGATC	1 cut(s)	478
AlwNI	CAGNNNCTG	2 cut(s)	419, 473
Ama87I	CYCGRG	3 cut(s)	752, 1322, 1404
AoxI	GGCC	3 cut(s)	346, 711, 1105
ApeKI	GCWGC	5 cut(s)	80, 416, 986, 1255, 1573
ApoI	RAATTY	2 cut(s)	182, 1297
ArsI	GACNNNNNNTTYG	2 cut(s)	1254, 1286
AsiGI	ACCGGT	1 cut(s)	1066
AspS9I	GGNCC	4 cut(s)	518, 647, 712, 905
AsuC2I	CCSGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
AsuHPI	GGTGA	3 cut(s)	86, 647, 1450
AvaI	CYCGRG	3 cut(s)	752, 1322, 1404
AvaII	GGWCC	3 cut(s)	518, 647, 905
BalI	TGGCCA	1 cut(s)	1107
BanII	GRGCYC	1 cut(s)	1398
BarI	GAAGNNNNNNTAC	2 cut(s)	208, 240
BauI	CACGAG	2 cut(s)	1004, 1287
BbsI	GAAGAC	1 cut(s)	138
Bbv12I	GWGCWC	1 cut(s)	1398
BbvI	GCAGC	5 cut(s)	67, 428, 998, 1267, 1585
BccI	CCATC	6 cut(s)	604, 873, 1066, 1097, 1558, 1604
BcgI	CGANNNNNNTGC	2 cut(s)	1382, 1416
BcnI	CCSGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
BcoDI	GTCTC	3 cut(s)	144, 315, 958
BfaI	CTAG	6 cut(s)	524, 537, 818, 875, 950, 1331
BfrI	CTTAAG	1 cut(s)	716
BfuAI	ACCTGC	1 cut(s)	739
BglII	AGATCT	2 cut(s)	893, 1318
BisI	GCNGC	6 cut(s)	6, 81, 417, 987, 1256, 1574
BlsI	GCNGC	6 cut(s)	7, 82, 418, 988, 1257, 1575
Bme1390I	CCNGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
Bme18I	GGWCC	3 cut(s)	518, 647, 905
BmeT110I	CYCGRG	3 cut(s)	752, 1322, 1404
BmgT120I	GGNCC	4 cut(s)	518, 647, 712, 905
BmiI	GGNNCC	1 cut(s)	594
BmrFI	CCNGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
BmsI	GCATC	8 cut(s)	17, 436, 1170, 1180, 1190, 1207, 1299, 1450
BpiI	GAAGAC	1 cut(s)	138
BplI	GAGNNNNNCTC	4 cut(s)	1066, 1098, 1120, 1152
BpmI	CTGGAG	2 cut(s)	1018, 1122
BpuEI	CTTGAG	3 cut(s)	230, 1234, 1466
BpuMI	CCSGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
BsaBI	GATNNNNATC	1 cut(s)	864
BsaI	GGTCTC	1 cut(s)	144
BsaJI	CCNNGG	4 cut(s)	176, 752, 1404, 1405
BsaWI	WCCGGW	1 cut(s)	1066
BsaXI	ACNNNNNCTCC	2 cut(s)	1605, 1635
Bsc4I	CCNNNNNNNGG	3 cut(s)	163, 664, 1411
Bse118I	RCCGGY	3 cut(s)	936, 1009, 1066
Bse3DI	GCAATG	1 cut(s)	588
Bse8I	GATNNNNATC	1 cut(s)	864
BseDI	CCNNGG	4 cut(s)	176, 752, 1404, 1405
BseGI	GGATG	1 cut(s)	1420
BseJI	GATNNNNATC	1 cut(s)	864
BseLI	CCNNNNNNNGG	3 cut(s)	163, 664, 1411
BseMI	GCAATG	1 cut(s)	588
BseMII	CTCAG	4 cut(s)	291, 561, 1296, 1620
BseRI	GAGGAG	2 cut(s)	353, 1029
BseXI	GCAGC	5 cut(s)	67, 428, 998, 1267, 1585
BseYI	CCCAGC	2 cut(s)	1484, 1501
BsgI	GTGCAG	1 cut(s)	1047
BshFI	GGCC	3 cut(s)	348, 713, 1107
BshTI	ACCGGT	1 cut(s)	1066
BsiHKAI	GWGCWC	1 cut(s)	1398
BsiHKCI	CYCGRG	3 cut(s)	752, 1322, 1404
BsiSI	CCGG	7 cut(s)	353, 425, 753, 937, 1010, 1067, 1405
BslFI	GGGAC	3 cut(s)	380, 407, 1528
BslI	CCNNNNNNNGG	3 cut(s)	163, 664, 1411
BsmAI	GTCTC	3 cut(s)	144, 315, 958
BsmFI	GGGAC	3 cut(s)	380, 407, 1528
BsnI	GGCC	3 cut(s)	348, 713, 1107
Bso31I	GGTCTC	1 cut(s)	144
BsoBI	CYCGRG	3 cut(s)	752, 1322, 1404
Bsp1286I	GDGCHC	1 cut(s)	1398
Bsp143I	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
BspACI	CCGC	5 cut(s)	5, 97, 254, 1421, 1463
BspANI	GGCC	3 cut(s)	348, 713, 1107
BspCNI	CTCAG	4 cut(s)	292, 562, 1297, 1621
BspHI	TCATGA	1 cut(s)	1239
BspLI	GGNNCC	1 cut(s)	594
BspMI	ACCTGC	1 cut(s)	739
BspPI	GGATC	1 cut(s)	478
BspTI	CTTAAG	1 cut(s)	716
BspTNI	GGTCTC	1 cut(s)	144
BsrBI	CCGCTC	1 cut(s)	254
BsrDI	GCAATG	1 cut(s)	588
BsrFI	RCCGGY	3 cut(s)	936, 1009, 1066
BssAI	RCCGGY	3 cut(s)	936, 1009, 1066
BssECI	CCNNGG	4 cut(s)	176, 752, 1404, 1405
BssMI	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
BssSI	CACGAG	2 cut(s)	1004, 1287
Bst2BI	CACGAG	2 cut(s)	1004, 1287
Bst4CI	ACNGT	8 cut(s)	371, 551, 659, 964, 1051, 1345, 1519, 1528
Bst6I	CTCTTC	1 cut(s)	702
BstAFI	CTTAAG	1 cut(s)	716
BstC8I	GCNNGC	2 cut(s)	154, 297
BstDEI	CTNAG	4 cut(s)	300, 570, 1305, 1629
BstDSI	CCRYGG	1 cut(s)	176
BstF5I	GGATG	1 cut(s)	1420
BstKTI	GATC	6 cut(s)	473, 588, 896, 1321, 1340, 1432
BstMAI	GTCTC	3 cut(s)	144, 315, 958
BstMBI	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
BstMWI	GCNNNNNNNGC	4 cut(s)	425, 1217, 1481, 1582
BstNSI	RCATGY	1 cut(s)	884
BstSCI	CCNGG	6 cut(s)	351, 423, 751, 752, 1403, 1404
BstV1I	GCAGC	5 cut(s)	67, 428, 998, 1267, 1585
BstV2I	GAAGAC	1 cut(s)	138
BstX2I	RGATCY	3 cut(s)	470, 893, 1318
BstYI	RGATCY	3 cut(s)	470, 893, 1318
BsuRI	GGCC	3 cut(s)	348, 713, 1107
BtgI	CCRYGG	1 cut(s)	176
BtgZI	GCGATG	1 cut(s)	215
BtsCI	GGATG	1 cut(s)	1420
BtsI	GCAGTG	1 cut(s)	456
BtsIMutI	CAGTG	4 cut(s)	456, 556, 1533, 1626
BveI	ACCTGC	1 cut(s)	739
Cac8I	GCNNGC	2 cut(s)	154, 297
CaiI	CAGNNNCTG	2 cut(s)	419, 473
CciI	TCATGA	1 cut(s)	1239
Cfr10I	RCCGGY	3 cut(s)	936, 1009, 1066
Cfr13I	GGNCC	4 cut(s)	518, 647, 712, 905
Cfr9I	CCCGGG	2 cut(s)	752, 1404
Csp6I	GTAC	1 cut(s)	1379
CspAI	ACCGGT	1 cut(s)	1066
CspCI	CAANNNNNGTGG	2 cut(s)	570, 605
CviAII	CATG	5 cut(s)	69, 119, 797, 881, 1240
CviQI	GTAC	1 cut(s)	1379
DdeI	CTNAG	4 cut(s)	300, 570, 1305, 1629
DpnI	GATC	6 cut(s)	472, 587, 895, 1320, 1339, 1431
DpnII	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
DraI	TTTAAA	1 cut(s)	1146
EaeI	YGGCCR	1 cut(s)	1105
Eam1104I	CTCTTC	1 cut(s)	702
EarI	CTCTTC	1 cut(s)	702
Ecl136II	GAGCTC	1 cut(s)	1396
Eco24I	GRGCYC	1 cut(s)	1398
Eco31I	GGTCTC	1 cut(s)	144
Eco32I	GATATC	2 cut(s)	66, 862
Eco47I	GGWCC	3 cut(s)	518, 647, 905
Eco53kI	GAGCTC	1 cut(s)	1396
Eco57I	CTGAAG	2 cut(s)	40, 1116
Eco88I	CYCGRG	3 cut(s)	752, 1322, 1404
EcoICRI	GAGCTC	1 cut(s)	1396
EcoO109I	RGGNCCY	1 cut(s)	712
EcoRI	GAATTC	1 cut(s)	1297
EcoRV	GATATC	2 cut(s)	66, 862
EcoT38I	GRGCYC	1 cut(s)	1398
FaeI	CATG	5 cut(s)	72, 122, 800, 884, 1243
FalI	AAGNNNNNCTT	2 cut(s)	699, 731
FaqI	GGGAC	3 cut(s)	380, 407, 1528
FatI	CATG	5 cut(s)	68, 118, 796, 880, 1239
FblI	GTMKAC	2 cut(s)	1185, 1272
Fnu4HI	GCNGC	6 cut(s)	6, 81, 417, 987, 1256, 1574
FokI	GGATG	1 cut(s)	1427
FriOI	GRGCYC	1 cut(s)	1398
Fsp4HI	GCNGC	6 cut(s)	6, 81, 417, 987, 1256, 1574
FspBI	CTAG	6 cut(s)	524, 537, 818, 875, 950, 1331
GluI	GCNGC	6 cut(s)	6, 81, 417, 987, 1256, 1574
GsaI	CCCAGC	2 cut(s)	1488, 1505
GsuI	CTGGAG	2 cut(s)	1018, 1122
HaeIII	GGCC	3 cut(s)	348, 713, 1107
HapII	CCGG	7 cut(s)	353, 425, 753, 937, 1010, 1067, 1405
Hin1II	CATG	5 cut(s)	72, 122, 800, 884, 1243
HincII	GTYRAC	1 cut(s)	1186
HindII	GTYRAC	1 cut(s)	1186
HindIII	AAGCTT	1 cut(s)	206
HpaII	CCGG	7 cut(s)	353, 425, 753, 937, 1010, 1067, 1405
HphI	GGTGA	3 cut(s)	86, 647, 1450
Hpy166II	GTNNAC	5 cut(s)	655, 1186, 1207, 1273, 1468
Hpy188I	TCNGA	8 cut(s)	59, 511, 647, 854, 983, 1096, 1116, 1128
Hpy8I	GTNNAC	5 cut(s)	655, 1186, 1207, 1273, 1468
HpyAV	CCTTC	4 cut(s)	64, 184, 377, 1500
HpyCH4III	ACNGT	8 cut(s)	371, 551, 659, 964, 1051, 1345, 1519, 1528
HpyCH4IV	ACGT	1 cut(s)	1190
HpyF10VI	GCNNNNNNNGC	4 cut(s)	425, 1217, 1481, 1582
HpyF3I	CTNAG	4 cut(s)	300, 570, 1305, 1629
HpySE526I	ACGT	1 cut(s)	1190
Hsp92II	CATG	5 cut(s)	72, 122, 800, 884, 1243
Kzo9I	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
LmnI	GCTCC	2 cut(s)	340, 598
Lsp1109I	GCAGC	5 cut(s)	67, 428, 998, 1267, 1585
LweI	GCATC	8 cut(s)	17, 436, 1170, 1180, 1190, 1207, 1299, 1450
MaeI	CTAG	6 cut(s)	524, 537, 818, 875, 950, 1331
MaeII	ACGT	1 cut(s)	1190
MaeIII	GTNAC	7 cut(s)	223, 440, 1001, 1033, 1384, 1522, 1624
MalI	GATC	6 cut(s)	472, 587, 895, 1320, 1339, 1431
MbiI	CCGCTC	1 cut(s)	254
MboI	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
MboII	GAAGA	6 cut(s)	143, 719, 869, 1570, 1573, 1646
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	3 cut(s)	470, 893, 1318
MhlI	GDGCHC	1 cut(s)	1398
MlsI	TGGCCA	1 cut(s)	1107
MluCI	AATT	8 cut(s)	88, 182, 513, 735, 759, 785, 847, 1297
MluNI	TGGCCA	1 cut(s)	1107
MlyI	GAGTC	2 cut(s)	1009, 1075
MmeI	TCCRAC	1 cut(s)	1478
Mox20I	TGGCCA	1 cut(s)	1107
MscI	TGGCCA	1 cut(s)	1107
MseI	TTAA	4 cut(s)	717, 846, 1145, 1193
MslI	CAYNNNNRTG	1 cut(s)	795
Msp20I	TGGCCA	1 cut(s)	1107
MspA1I	CMGCKG	3 cut(s)	299, 419, 1304
MspCI	CTTAAG	1 cut(s)	716
MspI	CCGG	7 cut(s)	353, 425, 753, 937, 1010, 1067, 1405
MspR9I	CCNGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
MunI	CAATTG	1 cut(s)	735
MwoI	GCNNNNNNNGC	4 cut(s)	425, 1217, 1481, 1582
NciI	CCSGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
NdeII	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
NlaIII	CATG	5 cut(s)	72, 122, 800, 884, 1243
NlaIV	GGNNCC	1 cut(s)	594
NmuCI	GTSAC	5 cut(s)	440, 1001, 1033, 1384, 1624
NspI	RCATGY	1 cut(s)	884
PagI	TCATGA	1 cut(s)	1239
PciI	ACATGT	1 cut(s)	880
PfeI	GAWTC	8 cut(s)	24, 356, 454, 574, 807, 1111, 1441, 1538
PflFI	GACNNNGTC	1 cut(s)	824
PfoI	TCCNGGA	1 cut(s)	351
PinAI	ACCGGT	1 cut(s)	1066
PkrI	GCNGC	6 cut(s)	7, 82, 418, 988, 1257, 1575
PleI	GAGTC	2 cut(s)	1008, 1075
PpsI	GAGTC	2 cut(s)	1008, 1075
PscI	ACATGT	1 cut(s)	880
PsiI	TTATAA	1 cut(s)	1649
Psp124BI	GAGCTC	1 cut(s)	1398
PspFI	CCCAGC	2 cut(s)	1484, 1501
PspN4I	GGNNCC	1 cut(s)	594
PspPI	GGNCC	4 cut(s)	518, 647, 712, 905
PstNI	CAGNNNCTG	2 cut(s)	419, 473
PsuI	RGATCY	3 cut(s)	470, 893, 1318
PsyI	GACNNNGTC	1 cut(s)	824
PvuII	CAGCTG	3 cut(s)	299, 419, 1304
RsaI	GTAC	1 cut(s)	1380
RsaNI	GTAC	1 cut(s)	1379
RseI	CAYNNNNRTG	1 cut(s)	795
SacI	GAGCTC	1 cut(s)	1398
SalI	GTCGAC	1 cut(s)	1184
SaqAI	TTAA	4 cut(s)	717, 846, 1145, 1193
SatI	GCNGC	6 cut(s)	6, 81, 417, 987, 1256, 1574
Sau3AI	GATC	6 cut(s)	470, 585, 893, 1318, 1337, 1429
Sau96I	GGNCC	4 cut(s)	518, 647, 712, 905
SchI	GAGTC	2 cut(s)	1009, 1075
ScrFI	CCNGG	6 cut(s)	353, 425, 753, 754, 1405, 1406
SduI	GDGCHC	1 cut(s)	1398
SfaNI	GCATC	8 cut(s)	17, 436, 1170, 1180, 1190, 1207, 1299, 1450
SinI	GGWCC	3 cut(s)	518, 647, 905
SmaI	CCCGGG	2 cut(s)	754, 1406
SmiMI	CAYNNNNRTG	1 cut(s)	795
SmlI	CTYRAG	4 cut(s)	209, 716, 1249, 1445
SmoI	CTYRAG	4 cut(s)	209, 716, 1249, 1445
Sse9I	AATT	8 cut(s)	88, 182, 513, 735, 759, 785, 847, 1297
SsiI	CCGC	5 cut(s)	5, 97, 254, 1421, 1463
SspI	AATATT	1 cut(s)	504
SspMI	CTAG	6 cut(s)	524, 537, 818, 875, 950, 1331
SstI	GAGCTC	1 cut(s)	1398
StyD4I	CCNGG	6 cut(s)	351, 423, 751, 752, 1403, 1404
TaaI	ACNGT	8 cut(s)	371, 551, 659, 964, 1051, 1345, 1519, 1528
TaiI	ACGT	1 cut(s)	1193
TaqI	TCGA	7 cut(s)	828, 868, 921, 1185, 1215, 1281, 1480
TasI	AATT	8 cut(s)	88, 182, 513, 735, 759, 785, 847, 1297
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	8 cut(s)	24, 356, 454, 574, 807, 1111, 1441, 1538
Tru1I	TTAA	4 cut(s)	717, 846, 1145, 1193
Tru9I	TTAA	4 cut(s)	717, 846, 1145, 1193
TscAI	CASTG	4 cut(s)	456, 556, 1533, 1633
TseFI	GTSAC	5 cut(s)	440, 1001, 1033, 1384, 1624
TseI	GCWGC	5 cut(s)	80, 416, 986, 1255, 1573
Tsp45I	GTSAC	5 cut(s)	440, 1001, 1033, 1384, 1624
TspDTI	ATGAA	6 cut(s)	218, 287, 939, 1228, 1256, 1310
TspGWI	ACGGA	2 cut(s)	193, 1329
TspMI	CCCGGG	2 cut(s)	752, 1404
TspRI	CASTG	4 cut(s)	456, 556, 1533, 1633
Tth111I	GACNNNGTC	1 cut(s)	824
Vha464I	CTTAAG	1 cut(s)	716
VpaK11BI	GGWCC	3 cut(s)	518, 647, 905
XapI	RAATTY	2 cut(s)	182, 1297
XbaI	TCTAGA	1 cut(s)	536
XceI	RCATGY	1 cut(s)	884
XmaI	CCCGGG	2 cut(s)	752, 1404
XmiI	GTMKAC	2 cut(s)	1185, 1272
XspI	CTAG	6 cut(s)	524, 537, 818, 875, 950, 1331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.