Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0013174

Physical Location & Seq

Genomic Coordinates Forward (+)

28617594 .. 28620345

Gene Structure 2752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013248

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGTCATTCGCCGTGCTATCCCCAACTCTCACTCTCAGGGTCAGTGCAAAGTTAGTTTCTAAGTTCCATTATATGGTTATAAGTGTATGTAGTCTGAGTCTTGGGAGCCTTGGCTTCAAAAGTGATATTGAATCAGTAGATAAAAAGGAAACCAATGAAGTTACGCGGTTGAGTTCTTTGAAAGGGGTTCCCAAAAGTAAGGCCAAGGTGGTTAGAAGCAATGTAATCAAGGCAGCTGGGGCGCACAGCTCTCTTGAAATAGAGTCAACTCTCTTTAATGCGAAATCATTTTCTGAGCTTGGCCTCCCTCCTTTGTTGATAGAGAGGTTAGAGAGTCAAGGCTTCAGGACTCCAACCGATGTTCAGTCCACTGCAATTCCAACGATTCTCAAAGATCATGATGTTGTGATTCAGTCTTACACGGGTTCGGGAAAAACATTAGCTTATCTTCTTCCTATCCTCTCTGAAGTAGGCCCCCTAAAGGAGAAACCATCTGATGGTGATGGTGATGGTGAATATGGGAAGAGAACAGCCATAGAAGCAGTTATTGTGGCTCCTTCCAGGGAGCTGGGCATGCAGATTGTAAGGGAGTTCGAAAAGATATTAGGACCTGCAAACAAGAAAATGGTTCAGCAGCTTGTAGGGGGTGCAAATCGATCTAGACAAGAAGAAGCACTTAAGAAGAATAAGCCTGCCATTGTTGTTGGGACACCAGGCAGGATTGCAGAGATTAGTGCAGCTGGGAAGCTTCACACCCACGGCTGCCGTTTCTTGGTCTTAGATGAGGTTGATCAACTGCTTTCTTTTAATTTTCGGGAGGACATGCACCGGATATTGGAACACGTAGGGAGGAAGTCCAGTGCAGAGTCACATGGACCAAAAGCCTCACTTGCCAAGCGAGCTGAGCGTCAGACTATTTTGGTTTCAGCAACAGTACCATTTTCAGTGATAAGGGCAGCCAGTAGCTGGGGGCACGATCCACTTCTGGTCCAAGCCAAAAATGTCATTCCCCTTGATTCCATCTCGCCCTCTGGACCCACTACATTGTCAGGACATTCGACCGGTACAAACTCAAACTCAAATTTGCCGGGTCATTCTGCAATAGAAAGCCTACCTCCATCTCTTAAACACTACTACTGTGTAACAAAGTTACAGCACAAGGTTGATGCATTGAGAAGATGTGTTCATGCTCTGGATGCCAAATCTGTCATAGCCTTCATGAACCACACTAAGCAGCTAAAAGATACCGTCTTCAAGCTGGAGGCCCGTGGAATGACGGCGTCAGAGCTACATGGGGATCTTGGGAAACTTGGTAGGGCAACAACTATGAAAAAATTCAAAAAGGGGGAGGTGAGAATTCTGGTGACAAATGAACTTTCAGCAAGGGGATTGGATGTGGCAGAATGTGATCTTGTTGTCAATCTGGACTTACCCACTGACACAATTCATTATGCACATCGAGCTGGTCGGACTGGTCGTCTTGGCAGGAAGGGCACTGTGGTAACAATGTGCGAAGAATCAGAAGTTTTCGTTGTGAGGAAACTGCAGAAGCAGCTTGGCATTCCCATTCCAGCTTGTGAGTTTACAGAAGGCAAGCTTGTCATCACCGAAGAAGAGAAGGCTCTACCAGCTCTGAGGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009663 GO:0009987 GO:0010496 GO:0010497 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034330 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045216 GO:0046483 GO:0051179 GO:0051234 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

548

Amino Acids

59.36

Weight (kDa)

9.39

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	119 - 316	7.3e-39	DEAD/DEAH box helicase
ResIII	PF04851	119 - 265	1e-06	Type III restriction enzyme, res subunit
Helicase_C	PF00271	387 - 495	3.9e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12770 AT1G12770
fragaria_vesca	FvH4_2g15280 FvH4_2g15280 FvH4_2g15280
malus_domestica	MD10G1007800.v1.1
prunus_persica	Prupe.8G011400_v2.0.a1
pyrus_communis	pycom10g00490
rosa_chinensis	RchiOBHm_Chr6g0278021
rosa_laevigata	RLG00000013248
rosa_multiflora	Rmu_co8373311.1_g000001
rosa_roxburghii	Rroxscaffold_7G00190590
rosa_rugosa	Rorug06G0114100.1
rosa_samantha	Rh6AG223800 Rh6BG227900 Rh6CG230400 Rh6DG221400
rosa_wichuraiana	Rw6G019550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	80
Acc36I	ACCTGC	1 cut(s)	619
AccB7I	CCANNNNNTGG	3 cut(s)	73, 497, 966
AccII	CGCG	1 cut(s)	166
AciI	CCGC	1 cut(s)	166
AclWI	GGATC	2 cut(s)	971, 1305
AcsI	RAATTY	3 cut(s)	1081, 1334, 1356
AcuI	CTGAAG	2 cut(s)	328, 486
AcyI	GRCGYC	1 cut(s)	1280
AfaI	GTAC	2 cut(s)	936, 1066
AfiI	CCNNNNNNNGG	6 cut(s)	73, 481, 497, 772, 835, 966
AflII	CTTAAG	1 cut(s)	677
AflIII	ACRYGT	1 cut(s)	841
AgeI	ACCGGT	1 cut(s)	1061
AgsI	TTSAA	6 cut(s)	118, 131, 181, 257, 1255, 1339
AhdI	GACNNNNNGTC	1 cut(s)	1476
AjnI	CCWGG	2 cut(s)	560, 712
AlwI	GGATC	2 cut(s)	971, 1305
AlwNI	CAGNNNCTG	1 cut(s)	966
AoxI	GGCC	4 cut(s)	201, 301, 472, 1263
ApeKI	GCWGC	7 cut(s)	233, 634, 737, 762, 956, 1234, 1552
ApoI	RAATTY	3 cut(s)	1081, 1334, 1356
AsiGI	ACCGGT	1 cut(s)	1061
Asp700I	GAANNNNTTC	1 cut(s)	1334
AspLEI	GCGC	1 cut(s)	244
AspS9I	GGNCC	6 cut(s)	473, 608, 875, 988, 1034, 1264
AsuC2I	CCSGG	1 cut(s)	1089
AsuHPI	GGTGA	6 cut(s)	512, 518, 524, 1363, 1375, 1597
AsuII	TTCGAA	1 cut(s)	594
AvaII	GGWCC	4 cut(s)	608, 875, 988, 1034
BaeGI	GKGCMC	2 cut(s)	975, 1496
BbsI	GAAGAC	1 cut(s)	1243
BbvI	GCAGC	7 cut(s)	245, 646, 749, 749, 968, 1246, 1564
BccI	CCATC	6 cut(s)	491, 497, 499, 503, 1028, 1126
BceAI	ACGGC	3 cut(s)	750, 775, 1293
BciT130I	CCWGG	2 cut(s)	562, 714
BclI	TGATCA	1 cut(s)	790
BcnI	CCSGG	1 cut(s)	1089
BfaI	CTAG	1 cut(s)	660
BfmI	CTRYAG	1 cut(s)	1544
BfrI	CTTAAG	1 cut(s)	677
BfuAI	ACCTGC	1 cut(s)	619
BisI	GCNGC	7 cut(s)	234, 635, 738, 763, 957, 1235, 1553
BlpI	GCTNAGC	1 cut(s)	903
BlsI	GCNGC	7 cut(s)	235, 636, 739, 764, 958, 1236, 1554
Bme1390I	CCNGG	3 cut(s)	562, 714, 1089
Bme18I	GGWCC	4 cut(s)	608, 875, 988, 1034
BmeRI	GACNNNNNGTC	1 cut(s)	1476
BmgT120I	GGNCC	6 cut(s)	473, 608, 875, 988, 1034, 1264
BmiI	GGNNCC	5 cut(s)	107, 189, 475, 555, 1036
BmrFI	CCNGG	3 cut(s)	562, 714, 1089
BmsI	GCATC	2 cut(s)	1156, 1186
BpiI	GAAGAC	1 cut(s)	1243
BpmI	CTGGAG	1 cut(s)	1280
Bpu1102I	GCTNAGC	1 cut(s)	903
Bpu14I	TTCGAA	1 cut(s)	594
BpuMI	CCSGG	1 cut(s)	1089
Bsa29I	ATCGAT	1 cut(s)	655
BsaAI	YACGTR	1 cut(s)	844
BsaHI	GRCGYC	1 cut(s)	1280
BsaJI	CCNNGG	5 cut(s)	109, 204, 561, 757, 1267
BsaWI	WCCGGW	2 cut(s)	828, 1061
Bsc4I	CCNNNNNNNGG	6 cut(s)	73, 481, 497, 772, 835, 966
Bse118I	RCCGGY	1 cut(s)	1061
Bse1I	ACTGG	3 cut(s)	858, 960, 1477
Bse3DI	GCAATG	1 cut(s)	226
BseBI	CCWGG	2 cut(s)	562, 714
BseCI	ATCGAT	1 cut(s)	655
BseDI	CCNNGG	5 cut(s)	109, 204, 561, 757, 1267
BseGI	GGATG	2 cut(s)	1201, 1399
BseLI	CCNNNNNNNGG	6 cut(s)	73, 481, 497, 772, 835, 966
BseMI	GCAATG	1 cut(s)	226
BseMII	CTCAG	5 cut(s)	49, 86, 285, 894, 1625
BseNI	ACTGG	3 cut(s)	858, 960, 1477
BseSI	GKGCMC	2 cut(s)	975, 1496
BseXI	GCAGC	7 cut(s)	245, 646, 749, 749, 968, 1246, 1564
BseYI	CCCAGC	4 cut(s)	236, 568, 740, 966
BsgI	GTGCAG	2 cut(s)	756, 882
Bsh1236I	CGCG	1 cut(s)	166
Bsh1285I	CGRYCG	1 cut(s)	1062
BshFI	GGCC	4 cut(s)	203, 303, 474, 1265
BshTI	ACCGGT	1 cut(s)	1061
BshVI	ATCGAT	1 cut(s)	655
BsiEI	CGRYCG	1 cut(s)	1062
BsiSI	CCGG	3 cut(s)	829, 1062, 1088
BslFI	GGGAC	1 cut(s)	721
BslI	CCNNNNNNNGG	6 cut(s)	73, 481, 497, 772, 835, 966
BsmFI	GGGAC	1 cut(s)	721
BsmI	GAATGC	1 cut(s)	1560
BsnI	GGCC	4 cut(s)	203, 303, 474, 1265
Bsp119I	TTCGAA	1 cut(s)	594
Bsp1286I	GDGCHC	2 cut(s)	975, 1496
Bsp143I	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
Bsp1720I	GCTNAGC	1 cut(s)	903
BspACI	CCGC	1 cut(s)	166
BspANI	GGCC	4 cut(s)	203, 303, 474, 1265
BspCNI	CTCAG	5 cut(s)	48, 87, 286, 895, 1626
BspDI	ATCGAT	1 cut(s)	655
BspFNI	CGCG	1 cut(s)	166
BspHI	TCATGA	2 cut(s)	397, 1218
BspLI	GGNNCC	5 cut(s)	107, 189, 475, 555, 1036
BspMAI	CTGCAG	1 cut(s)	1548
BspMI	ACCTGC	1 cut(s)	619
BspPI	GGATC	2 cut(s)	971, 1305
BspT104I	TTCGAA	1 cut(s)	594
BspTI	CTTAAG	1 cut(s)	677
BsrDI	GCAATG	1 cut(s)	226
BsrFI	RCCGGY	1 cut(s)	1061
BsrI	ACTGG	3 cut(s)	858, 960, 1477
BssAI	RCCGGY	1 cut(s)	1061
BssECI	CCNNGG	5 cut(s)	109, 204, 561, 757, 1267
BssMI	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
BssNI	GRCGYC	1 cut(s)	1280
BssT1I	CCWWGG	2 cut(s)	109, 204
Bst2UI	CCWGG	2 cut(s)	562, 714
Bst4CI	ACNGT	4 cut(s)	934, 1139, 1249, 1498
Bst6I	CTCTTC	2 cut(s)	518, 1608
BstACI	GRCGYC	1 cut(s)	1280
BstAFI	CTTAAG	1 cut(s)	677
BstBAI	YACGTR	1 cut(s)	844
BstBI	TTCGAA	1 cut(s)	594
BstC8I	GCNNGC	4 cut(s)	575, 693, 900, 1595
BstDEI	CTNAG	8 cut(s)	35, 60, 95, 294, 778, 903, 1230, 1634
BstDSI	CCRYGG	2 cut(s)	757, 1267
BstF5I	GGATG	2 cut(s)	1201, 1399
BstFNI	CGCG	1 cut(s)	166
BstHHI	GCGC	1 cut(s)	244
BstKTI	GATC	6 cut(s)	397, 659, 793, 979, 1300, 1411
BstMBI	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
BstMCI	CGRYCG	1 cut(s)	1062
BstNI	CCWGG	2 cut(s)	562, 714
BstNSI	RCATGY	2 cut(s)	577, 826
BstSCI	CCNGG	3 cut(s)	560, 712, 1087
BstSFI	CTRYAG	1 cut(s)	1544
BstSLI	GKGCMC	2 cut(s)	975, 1496
BstUI	CGCG	1 cut(s)	166
BstV1I	GCAGC	7 cut(s)	245, 646, 749, 749, 968, 1246, 1564
BstV2I	GAAGAC	1 cut(s)	1243
BstX2I	RGATCY	1 cut(s)	1297
BstXI	CCANNNNNNTGG	1 cut(s)	568
BstYI	RGATCY	1 cut(s)	1297
Bsu15I	ATCGAT	1 cut(s)	655
BsuRI	GGCC	4 cut(s)	203, 303, 474, 1265
BsuTUI	ATCGAT	1 cut(s)	655
BtgI	CCRYGG	2 cut(s)	757, 1267
BtsCI	GGATG	2 cut(s)	1201, 1399
BtsI	GCAGTG	1 cut(s)	369
BtsIMutI	CAGTG	6 cut(s)	49, 369, 865, 951, 1434, 1494
BveI	ACCTGC	1 cut(s)	619
Cac8I	GCNNGC	4 cut(s)	575, 693, 900, 1595
CaiI	CAGNNNCTG	1 cut(s)	966
CciI	TCATGA	2 cut(s)	397, 1218
CfoI	GCGC	1 cut(s)	244
Cfr10I	RCCGGY	1 cut(s)	1061
Cfr13I	GGNCC	6 cut(s)	473, 608, 875, 988, 1034, 1264
ClaI	ATCGAT	1 cut(s)	655
CseI	GACGC	2 cut(s)	896, 1269
Csp6I	GTAC	2 cut(s)	935, 1065
CspAI	ACCGGT	1 cut(s)	1061
CviAII	CATG	8 cut(s)	398, 574, 823, 872, 1187, 1219, 1292, 1641
CviQI	GTAC	2 cut(s)	935, 1065
DdeI	CTNAG	8 cut(s)	35, 60, 95, 294, 778, 903, 1230, 1634
DpnI	GATC	6 cut(s)	396, 658, 792, 978, 1299, 1410
DpnII	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
DriI	GACNNNNNGTC	1 cut(s)	1476
Eam1104I	CTCTTC	2 cut(s)	518, 1608
Eam1105I	GACNNNNNGTC	1 cut(s)	1476
EarI	CTCTTC	2 cut(s)	518, 1608
Eco130I	CCWWGG	2 cut(s)	109, 204
Eco47I	GGWCC	4 cut(s)	608, 875, 988, 1034
Eco57I	CTGAAG	2 cut(s)	328, 486
EcoO109I	RGGNCCY	2 cut(s)	473, 608
EcoRI	GAATTC	1 cut(s)	1356
EcoRII	CCWGG	2 cut(s)	560, 712
EcoT14I	CCWWGG	2 cut(s)	109, 204
EcoT22I	ATGCAT	1 cut(s)	1171
ErhI	CCWWGG	2 cut(s)	109, 204
FaeI	CATG	8 cut(s)	401, 577, 826, 875, 1190, 1222, 1295, 1644
FalI	AAGNNNNNCTT	6 cut(s)	660, 692, 873, 905, 1581, 1613
FaqI	GGGAC	1 cut(s)	721
FatI	CATG	8 cut(s)	397, 573, 822, 871, 1186, 1218, 1291, 1640
FbaI	TGATCA	1 cut(s)	790
Fnu4HI	GCNGC	7 cut(s)	234, 635, 738, 763, 957, 1235, 1553
FokI	GGATG	2 cut(s)	1208, 1406
Fsp4HI	GCNGC	7 cut(s)	234, 635, 738, 763, 957, 1235, 1553
FspBI	CTAG	1 cut(s)	660
GlaI	GCGC	1 cut(s)	243
GluI	GCNGC	7 cut(s)	234, 635, 738, 763, 957, 1235, 1553
GsaI	CCCAGC	4 cut(s)	240, 572, 744, 970
GsuI	CTGGAG	1 cut(s)	1280
HaeIII	GGCC	4 cut(s)	203, 303, 474, 1265
HapII	CCGG	3 cut(s)	829, 1062, 1088
HgaI	GACGC	2 cut(s)	896, 1269
HhaI	GCGC	1 cut(s)	244
Hin1I	GRCGYC	1 cut(s)	1280
Hin1II	CATG	8 cut(s)	401, 577, 826, 875, 1190, 1222, 1295, 1644
Hin6I	GCGC	1 cut(s)	242
HinP1I	GCGC	1 cut(s)	242
HincII	GTYRAC	1 cut(s)	267
HindII	GTYRAC	1 cut(s)	267
HindIII	AAGCTT	2 cut(s)	746, 1595
HpaII	CCGG	3 cut(s)	829, 1062, 1088
HphI	GGTGA	6 cut(s)	512, 518, 524, 1363, 1375, 1597
Hpy166II	GTNNAC	3 cut(s)	267, 369, 1584
Hpy188I	TCNGA	9 cut(s)	96, 295, 466, 496, 912, 1285, 1470, 1522, 1635
Hpy8I	GTNNAC	3 cut(s)	267, 369, 1584
HpyAV	CCTTC	5 cut(s)	567, 1225, 1483, 1583, 1612
HpyCH4III	ACNGT	4 cut(s)	934, 1139, 1249, 1498
HpyCH4IV	ACGT	1 cut(s)	843
HpyF3I	CTNAG	8 cut(s)	35, 60, 95, 294, 778, 903, 1230, 1634
HpySE526I	ACGT	1 cut(s)	843
Hsp92I	GRCGYC	1 cut(s)	1280
Hsp92II	CATG	8 cut(s)	401, 577, 826, 875, 1190, 1222, 1295, 1644
HspAI	GCGC	1 cut(s)	242
Ksp22I	TGATCA	1 cut(s)	790
Kzo9I	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
LmnI	GCTCC	3 cut(s)	105, 559, 565
Lsp1109I	GCAGC	7 cut(s)	245, 646, 749, 749, 968, 1246, 1564
LweI	GCATC	2 cut(s)	1156, 1186
MaeI	CTAG	1 cut(s)	660
MaeII	ACGT	1 cut(s)	843
MaeIII	GTNAC	6 cut(s)	160, 867, 1141, 1149, 1363, 1501
MalI	GATC	6 cut(s)	396, 658, 792, 978, 1299, 1410
MboI	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
MflI	RGATCY	1 cut(s)	1297
MhlI	GDGCHC	2 cut(s)	975, 1496
MluCI	AATT	6 cut(s)	375, 808, 1081, 1334, 1356, 1443
MlyI	GAGTC	5 cut(s)	106, 272, 343, 343, 875
MmeI	TCCRAC	3 cut(s)	377, 404, 1448
Mph1103I	ATGCAT	1 cut(s)	1171
MroXI	GAANNNNTTC	1 cut(s)	1334
MseI	TTAA	4 cut(s)	276, 678, 807, 1125
MspA1I	CMGCKG	2 cut(s)	236, 740
MspCI	CTTAAG	1 cut(s)	677
MspI	CCGG	3 cut(s)	829, 1062, 1088
MspR9I	CCNGG	3 cut(s)	562, 714, 1089
Mva1269I	GAATGC	1 cut(s)	1560
MvaI	CCWGG	2 cut(s)	562, 714
MvnI	CGCG	1 cut(s)	166
NciI	CCSGG	1 cut(s)	1089
NdeII	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
NlaIII	CATG	8 cut(s)	401, 577, 826, 875, 1190, 1222, 1295, 1644
NlaIV	GGNNCC	5 cut(s)	107, 189, 475, 555, 1036
NmuCI	GTSAC	2 cut(s)	867, 1363
NsiI	ATGCAT	1 cut(s)	1171
NspI	RCATGY	2 cut(s)	577, 826
NspV	TTCGAA	1 cut(s)	594
PaeI	GCATGC	1 cut(s)	577
PagI	TCATGA	2 cut(s)	397, 1218
PcsI	WCGNNNNNNNCGW	1 cut(s)	1474
PctI	GAATGC	1 cut(s)	1560
PdmI	GAANNNNTTC	1 cut(s)	1334
PfeI	GAWTC	5 cut(s)	131, 385, 409, 1016, 1517
PflFI	GACNNNGTC	1 cut(s)	1279
PflMI	CCANNNNNTGG	3 cut(s)	73, 497, 966
PinAI	ACCGGT	1 cut(s)	1061
PkrI	GCNGC	7 cut(s)	235, 636, 739, 764, 958, 1236, 1554
PleI	GAGTC	5 cut(s)	105, 271, 342, 343, 874
PpsI	GAGTC	5 cut(s)	105, 271, 342, 343, 874
Ppu21I	YACGTR	1 cut(s)	844
PpuMI	RGGWCCY	1 cut(s)	608
PsiI	TTATAA	1 cut(s)	80
Psp5II	RGGWCCY	1 cut(s)	608
Psp6I	CCWGG	2 cut(s)	560, 712
PspFI	CCCAGC	4 cut(s)	236, 568, 740, 966
PspGI	CCWGG	2 cut(s)	560, 712
PspN4I	GGNNCC	5 cut(s)	107, 189, 475, 555, 1036
PspPI	GGNCC	6 cut(s)	473, 608, 875, 988, 1034, 1264
PspPPI	RGGWCCY	1 cut(s)	608
PstI	CTGCAG	1 cut(s)	1548
PstNI	CAGNNNCTG	1 cut(s)	966
PsuI	RGATCY	1 cut(s)	1297
PsyI	GACNNNGTC	1 cut(s)	1279
PvuII	CAGCTG	2 cut(s)	236, 740
RsaI	GTAC	2 cut(s)	936, 1066
RsaNI	GTAC	2 cut(s)	935, 1065
SaqAI	TTAA	4 cut(s)	276, 678, 807, 1125
SatI	GCNGC	7 cut(s)	234, 635, 738, 763, 957, 1235, 1553
Sau3AI	GATC	6 cut(s)	394, 656, 790, 976, 1297, 1408
Sau96I	GGNCC	6 cut(s)	473, 608, 875, 988, 1034, 1264
SchI	GAGTC	5 cut(s)	106, 272, 343, 343, 875
ScrFI	CCNGG	3 cut(s)	562, 714, 1089
SduI	GDGCHC	2 cut(s)	975, 1496
SfaNI	GCATC	2 cut(s)	1156, 1186
SfcI	CTRYAG	1 cut(s)	1544
SfuI	TTCGAA	1 cut(s)	594
SinI	GGWCC	4 cut(s)	608, 875, 988, 1034
SmlI	CTYRAG	1 cut(s)	677
SmoI	CTYRAG	1 cut(s)	677
SphI	GCATGC	1 cut(s)	577
Sse9I	AATT	6 cut(s)	375, 808, 1081, 1334, 1356, 1443
SsiI	CCGC	1 cut(s)	166
SspMI	CTAG	1 cut(s)	660
StyD4I	CCNGG	3 cut(s)	560, 712, 1087
StyI	CCWWGG	2 cut(s)	109, 204
TaaI	ACNGT	4 cut(s)	934, 1139, 1249, 1498
TaiI	ACGT	1 cut(s)	846
TaqI	TCGA	4 cut(s)	594, 655, 1058, 1459
TasI	AATT	6 cut(s)	375, 808, 1081, 1334, 1356, 1443
TfiI	GAWTC	5 cut(s)	131, 385, 409, 1016, 1517
Tru1I	TTAA	4 cut(s)	276, 678, 807, 1125
Tru9I	TTAA	4 cut(s)	276, 678, 807, 1125
TscAI	CASTG	6 cut(s)	49, 376, 865, 951, 1441, 1501
TseFI	GTSAC	2 cut(s)	867, 1363
TseI	GCWGC	7 cut(s)	233, 634, 737, 762, 956, 1234, 1552
Tsp45I	GTSAC	2 cut(s)	867, 1363
TspDTI	ATGAA	7 cut(s)	171, 1175, 1207, 1235, 1343, 1386, 1436
TspRI	CASTG	6 cut(s)	49, 376, 865, 951, 1441, 1501
Tth111I	GACNNNGTC	1 cut(s)	1279
Van91I	CCANNNNNTGG	3 cut(s)	73, 497, 966
Vha464I	CTTAAG	1 cut(s)	677
VpaK11BI	GGWCC	4 cut(s)	608, 875, 988, 1034
XapI	RAATTY	3 cut(s)	1081, 1334, 1356
XbaI	TCTAGA	1 cut(s)	659
XceI	RCATGY	2 cut(s)	577, 826
XmnI	GAANNNNTTC	1 cut(s)	1334
XspI	CTAG	1 cut(s)	660
Zsp2I	ATGCAT	1 cut(s)	1171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.