Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013174

Physical Location & Seq

Genomic Coordinates Reverse (-)

40808777 .. 40811708

Gene Structure 2932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24942

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGCCAGCATTAATCTCGTCAAGGTTGCTAATTTTCGGAGAGTCTCTGTCCTTCCACAAGTTTTCAAATGTGTCTAGGAATGCGTGGTTCGGCAGAAGTGTATGTAGTCTGAGTCTTGGAAGCCTTGGCTTCAAAAGTGATATTGAATCAGTAGATAAAAAGGAAACCAATGAAGTTACGCGGTTGAGTTCTTTGAAAGGGGTTCCCAAAAGTAAGGCCAAGGTGGTTAGAAGCAATGTAATCAAGGCAGCTGGGGCACACAGCTCTCTTGAAATAGAGTCAACTCTCTTTAATGCGAAATCATTTTCTGAGCTTGGTCTCCCTCCTTTGTTGATAGAGAGGTTAGAGAGTCAAGGCTTCAGGACTCCAACCGATGTTCAGTCCACCGCAATTCCAACGATTCTCAAAGATCATGATGTTGTGATTCAGTCTTACACGGGTTCGGGAAAAACATTAGCTTATCTTCTTCCTATCCTCTCTGAAGTAGGCCCCCTAAAGGAGAAAACATCTGATGGTGATGGTGAATATGGGAAGAGAACAGACATAGAAGCAGTTATTGTGGCTCCTTCCAGGGAGCTGGGCATGCAGATTGTAAGGGAGTTCGAAAAGATATTAGGACCTGCAAACAAGAAAATGGTTCAGCAGCTTGTAGGGGGTGCAAATCGATCAAGACAAGAAGAAGCACTTAAGAAGAATAAGCCTGCCATTGTTGTTGGGACACCAGGCAGGATTGCAGAGATTAGTGCAGCTGGGAAGCTTCACACCCACGGCTGCCGTTTCTTGGTCTTAGATGAGGTTGATCAACTGCTTTCTTTTAATTTTCGGGAGGACATGCACCGGATATTGGAACATGTAGGGAGGAAGTCCAGTGCAGAGTCACATGGACCAAAAGGCTCACTTGCCAAGCGAGCTGAGCGTCAGACTATTTTGGTTTCAGCAACAGTACCATTTTCAGTGATAAGGGCAGCCAGTAGCTGGGGGCGCGATCCACTTCTGGTCCAAGCCAAAAATGTCATTCCCCTTGATTCCATCTCACCCTCTGGACCCACTACATTGTCAGGACATTCAACCAGTACAAACTCAAACTCAAATTTGCAGGGTCATTCTGCAATAGAAAGCCTACCTCCATCTCTTAAACACTACTACTGTGTAACAAAGTTACAACACAAGGTTGATGCATTGAGAAGATGTGTTCATGCTCTGGATGCCAAATCTGTCATAGCCTTCATGAACCACACTCGGCAGCTAAAAGATACCGTCTTCAAGCTGGAGGCCCGTGGAATGACGGCGTCAGAGCTACATGGGGATCTTGGTAAACTTGGTAGGGCAACAACTATGAAAAAATTCAAAAAGGGGGAGGTGAGAATTCTGGTGACAAATGAACTTTCAGCAAGGGGATTGGATGTGGCAGAATGTGATCTTGTTGTCAATCTGGACTTACCCACTGACACGATTCATTATGCACATCGAGCTGGTCGGACTGGTCGTCTTGGCAGGAAGGGCACTGTGGTAACAATGTGCGAAGAATCAGAAGTTTTCGTTGTGAGGAAACTGCAGAAGCAGCTTGGCATTCCCATTCCAGCTTGTGAGTTTACAGAAGGCAAGCTTGTCATCACCGAAGAAGAGAAGGCTCAACCAGCTGTGAGGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009663 GO:0009987 GO:0010496 GO:0010497 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034330 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045216 GO:0046483 GO:0051179 GO:0051234 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

550

Amino Acids

59.96

Weight (kDa)

9.46

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	124 - 319	4.5e-39	DEAD/DEAH box helicase
ResIII	PF04851	124 - 267	5.1e-07	Type III restriction enzyme, res subunit
Helicase_C	PF00271	390 - 498	4.7e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12770 AT1G12770
fragaria_vesca	FvH4_2g15280 FvH4_2g15280 FvH4_2g15280
malus_domestica	MD10G1007800.v1.1
prunus_persica	Prupe.8G011400_v2.0.a1
pyrus_communis	pycom10g00490
rosa_chinensis	RchiOBHm_Chr6g0278021
rosa_laevigata	RLG00000013248
rosa_multiflora	Rmu_co8373311.1_g000001
rosa_roxburghii	Rroxscaffold_7G00190590
rosa_rugosa	Rorug06G0114100.1
rosa_samantha	Rh6AG223800 Rh6BG227900 Rh6CG230400 Rh6DG221400
rosa_wichuraiana	Rw6G019550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	628
AccB7I	CCANNNNNTGG	1 cut(s)	975
AccII	CGCG	2 cut(s)	181, 984
AciI	CCGC	2 cut(s)	181, 387
AclWI	GGATC	2 cut(s)	980, 1314
AcsI	RAATTY	3 cut(s)	1090, 1343, 1365
AcuI	CTGAAG	2 cut(s)	343, 501
AcyI	GRCGYC	1 cut(s)	1289
AfaI	GTAC	2 cut(s)	945, 1075
AfiI	CCNNNNNNNGG	4 cut(s)	496, 781, 844, 975
AflII	CTTAAG	1 cut(s)	686
AflIII	ACRYGT	1 cut(s)	850
AgsI	TTSAA	8 cut(s)	66, 133, 146, 196, 272, 1068, 1264, 1348
AhdI	GACNNNNNGTC	1 cut(s)	1485
AjnI	CCWGG	2 cut(s)	569, 721
Alw26I	GTCTC	2 cut(s)	48, 323
AlwI	GGATC	2 cut(s)	980, 1314
AlwNI	CAGNNNCTG	1 cut(s)	975
AoxI	GGCC	3 cut(s)	216, 487, 1272
ApeKI	GCWGC	7 cut(s)	248, 643, 746, 771, 965, 1243, 1561
ApoI	RAATTY	3 cut(s)	1090, 1343, 1365
AseI	ATTAAT	1 cut(s)	11
Asp700I	GAANNNNTTC	1 cut(s)	1343
AspLEI	GCGC	1 cut(s)	984
AspS9I	GGNCC	6 cut(s)	488, 617, 884, 997, 1043, 1273
AsuHPI	GGTGA	6 cut(s)	527, 533, 1026, 1372, 1384, 1606
AsuII	TTCGAA	1 cut(s)	603
AvaII	GGWCC	4 cut(s)	617, 884, 997, 1043
BaeGI	GKGCMC	2 cut(s)	259, 1505
BbsI	GAAGAC	1 cut(s)	1252
BbvI	GCAGC	7 cut(s)	260, 655, 758, 758, 977, 1255, 1573
BccI	CCATC	4 cut(s)	506, 512, 1037, 1135
BceAI	ACGGC	3 cut(s)	759, 784, 1302
BcgI	CGANNNNNNTGC	1 cut(s)	31
BciT130I	CCWGG	2 cut(s)	571, 723
BclI	TGATCA	1 cut(s)	799
BcoDI	GTCTC	2 cut(s)	48, 323
BfaI	CTAG	1 cut(s)	75
BfmI	CTRYAG	1 cut(s)	1553
BfrI	CTTAAG	1 cut(s)	686
BfuAI	ACCTGC	1 cut(s)	628
BisI	GCNGC	7 cut(s)	249, 644, 747, 772, 966, 1244, 1562
BlpI	GCTNAGC	1 cut(s)	912
BlsI	GCNGC	7 cut(s)	250, 645, 748, 773, 967, 1245, 1563
Bme1390I	CCNGG	2 cut(s)	571, 723
Bme18I	GGWCC	4 cut(s)	617, 884, 997, 1043
BmeRI	GACNNNNNGTC	1 cut(s)	1485
BmgT120I	GGNCC	6 cut(s)	488, 617, 884, 997, 1043, 1273
BmiI	GGNNCC	4 cut(s)	204, 490, 564, 1045
BmrFI	CCNGG	2 cut(s)	571, 723
BmsI	GCATC	2 cut(s)	1165, 1195
BpiI	GAAGAC	1 cut(s)	1252
BpmI	CTGGAG	1 cut(s)	1289
Bpu1102I	GCTNAGC	1 cut(s)	912
Bpu14I	TTCGAA	1 cut(s)	603
Bsa29I	ATCGAT	1 cut(s)	664
BsaHI	GRCGYC	1 cut(s)	1289
BsaI	GGTCTC	1 cut(s)	323
BsaJI	CCNNGG	5 cut(s)	124, 219, 570, 766, 1276
BsaWI	WCCGGW	1 cut(s)	837
Bsc4I	CCNNNNNNNGG	4 cut(s)	496, 781, 844, 975
Bse1I	ACTGG	4 cut(s)	867, 969, 1071, 1486
Bse3DI	GCAATG	1 cut(s)	241
BseBI	CCWGG	2 cut(s)	571, 723
BseCI	ATCGAT	1 cut(s)	664
BseDI	CCNNGG	5 cut(s)	124, 219, 570, 766, 1276
BseGI	GGATG	2 cut(s)	1210, 1408
BseLI	CCNNNNNNNGG	4 cut(s)	496, 781, 844, 975
BseMI	GCAATG	1 cut(s)	241
BseMII	CTCAG	3 cut(s)	101, 300, 903
BseNI	ACTGG	4 cut(s)	867, 969, 1071, 1486
BseSI	GKGCMC	2 cut(s)	259, 1505
BseXI	GCAGC	7 cut(s)	260, 655, 758, 758, 977, 1255, 1573
BseYI	CCCAGC	4 cut(s)	251, 577, 749, 975
BsgI	GTGCAG	2 cut(s)	765, 891
Bsh1236I	CGCG	2 cut(s)	181, 984
BshFI	GGCC	3 cut(s)	218, 489, 1274
BshVI	ATCGAT	1 cut(s)	664
BsiSI	CCGG	1 cut(s)	838
BslFI	GGGAC	1 cut(s)	730
BslI	CCNNNNNNNGG	4 cut(s)	496, 781, 844, 975
BsmAI	GTCTC	2 cut(s)	48, 323
BsmFI	GGGAC	1 cut(s)	730
BsmI	GAATGC	2 cut(s)	85, 1569
BsnI	GGCC	3 cut(s)	218, 489, 1274
Bso31I	GGTCTC	1 cut(s)	323
Bsp119I	TTCGAA	1 cut(s)	603
Bsp1286I	GDGCHC	2 cut(s)	259, 1505
Bsp143I	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
Bsp1720I	GCTNAGC	1 cut(s)	912
BspACI	CCGC	2 cut(s)	181, 387
BspANI	GGCC	3 cut(s)	218, 489, 1274
BspCNI	CTCAG	3 cut(s)	102, 301, 904
BspDI	ATCGAT	1 cut(s)	664
BspFNI	CGCG	2 cut(s)	181, 984
BspHI	TCATGA	2 cut(s)	412, 1227
BspLI	GGNNCC	4 cut(s)	204, 490, 564, 1045
BspMAI	CTGCAG	1 cut(s)	1557
BspMI	ACCTGC	1 cut(s)	628
BspPI	GGATC	2 cut(s)	980, 1314
BspT104I	TTCGAA	1 cut(s)	603
BspTI	CTTAAG	1 cut(s)	686
BspTNI	GGTCTC	1 cut(s)	323
BsrDI	GCAATG	1 cut(s)	241
BsrI	ACTGG	4 cut(s)	867, 969, 1071, 1486
BssECI	CCNNGG	5 cut(s)	124, 219, 570, 766, 1276
BssMI	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
BssNI	GRCGYC	1 cut(s)	1289
BssT1I	CCWWGG	2 cut(s)	124, 219
Bst2UI	CCWGG	2 cut(s)	571, 723
Bst4CI	ACNGT	4 cut(s)	943, 1148, 1258, 1507
Bst6I	CTCTTC	2 cut(s)	527, 1617
BstACI	GRCGYC	1 cut(s)	1289
BstAFI	CTTAAG	1 cut(s)	686
BstBI	TTCGAA	1 cut(s)	603
BstC8I	GCNNGC	5 cut(s)	6, 584, 702, 909, 1604
BstDEI	CTNAG	4 cut(s)	110, 309, 787, 912
BstDSI	CCRYGG	2 cut(s)	766, 1276
BstF5I	GGATG	2 cut(s)	1210, 1408
BstFNI	CGCG	2 cut(s)	181, 984
BstHHI	GCGC	1 cut(s)	984
BstKTI	GATC	6 cut(s)	412, 668, 802, 988, 1309, 1420
BstMAI	GTCTC	2 cut(s)	48, 323
BstMBI	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
BstNI	CCWGG	2 cut(s)	571, 723
BstNSI	RCATGY	3 cut(s)	586, 835, 854
BstSCI	CCNGG	2 cut(s)	569, 721
BstSFI	CTRYAG	1 cut(s)	1553
BstSLI	GKGCMC	2 cut(s)	259, 1505
BstUI	CGCG	2 cut(s)	181, 984
BstV1I	GCAGC	7 cut(s)	260, 655, 758, 758, 977, 1255, 1573
BstV2I	GAAGAC	1 cut(s)	1252
BstX2I	RGATCY	1 cut(s)	1306
BstXI	CCANNNNNNTGG	1 cut(s)	577
BstYI	RGATCY	1 cut(s)	1306
Bsu15I	ATCGAT	1 cut(s)	664
BsuRI	GGCC	3 cut(s)	218, 489, 1274
BsuTUI	ATCGAT	1 cut(s)	664
BtgI	CCRYGG	2 cut(s)	766, 1276
BtsCI	GGATG	2 cut(s)	1210, 1408
BtsIMutI	CAGTG	4 cut(s)	874, 960, 1443, 1503
BveI	ACCTGC	1 cut(s)	628
Cac8I	GCNNGC	5 cut(s)	6, 584, 702, 909, 1604
CaiI	CAGNNNCTG	1 cut(s)	975
CciI	TCATGA	2 cut(s)	412, 1227
CfoI	GCGC	1 cut(s)	984
Cfr13I	GGNCC	6 cut(s)	488, 617, 884, 997, 1043, 1273
ClaI	ATCGAT	1 cut(s)	664
CseI	GACGC	2 cut(s)	905, 1278
Csp6I	GTAC	2 cut(s)	944, 1074
CviAII	CATG	9 cut(s)	413, 583, 832, 851, 881, 1196, 1228, 1301, 1650
CviQI	GTAC	2 cut(s)	944, 1074
DdeI	CTNAG	4 cut(s)	110, 309, 787, 912
DpnI	GATC	6 cut(s)	411, 667, 801, 987, 1308, 1419
DpnII	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
DriI	GACNNNNNGTC	1 cut(s)	1485
Eam1104I	CTCTTC	2 cut(s)	527, 1617
Eam1105I	GACNNNNNGTC	1 cut(s)	1485
EarI	CTCTTC	2 cut(s)	527, 1617
Eco130I	CCWWGG	2 cut(s)	124, 219
Eco31I	GGTCTC	1 cut(s)	323
Eco47I	GGWCC	4 cut(s)	617, 884, 997, 1043
Eco57I	CTGAAG	2 cut(s)	343, 501
EcoO109I	RGGNCCY	2 cut(s)	488, 617
EcoRI	GAATTC	1 cut(s)	1365
EcoRII	CCWGG	2 cut(s)	569, 721
EcoT14I	CCWWGG	2 cut(s)	124, 219
EcoT22I	ATGCAT	1 cut(s)	1180
ErhI	CCWWGG	2 cut(s)	124, 219
FaeI	CATG	9 cut(s)	416, 586, 835, 854, 884, 1199, 1231, 1304, 1653
FalI	AAGNNNNNCTT	6 cut(s)	669, 701, 882, 914, 1590, 1622
FaqI	GGGAC	1 cut(s)	730
FatI	CATG	9 cut(s)	412, 582, 831, 850, 880, 1195, 1227, 1300, 1649
FbaI	TGATCA	1 cut(s)	799
Fnu4HI	GCNGC	7 cut(s)	249, 644, 747, 772, 966, 1244, 1562
FokI	GGATG	2 cut(s)	1217, 1415
Fsp4HI	GCNGC	7 cut(s)	249, 644, 747, 772, 966, 1244, 1562
FspBI	CTAG	1 cut(s)	75
GlaI	GCGC	1 cut(s)	983
GluI	GCNGC	7 cut(s)	249, 644, 747, 772, 966, 1244, 1562
GsaI	CCCAGC	4 cut(s)	255, 581, 753, 979
GsuI	CTGGAG	1 cut(s)	1289
HaeIII	GGCC	3 cut(s)	218, 489, 1274
HapII	CCGG	1 cut(s)	838
HgaI	GACGC	2 cut(s)	905, 1278
HhaI	GCGC	1 cut(s)	984
Hin1I	GRCGYC	1 cut(s)	1289
Hin1II	CATG	9 cut(s)	416, 586, 835, 854, 884, 1199, 1231, 1304, 1653
Hin6I	GCGC	1 cut(s)	982
HinP1I	GCGC	1 cut(s)	982
HincII	GTYRAC	1 cut(s)	282
HindII	GTYRAC	1 cut(s)	282
HindIII	AAGCTT	2 cut(s)	755, 1604
HpaII	CCGG	1 cut(s)	838
HphI	GGTGA	6 cut(s)	527, 533, 1026, 1372, 1384, 1606
Hpy166II	GTNNAC	4 cut(s)	282, 384, 1316, 1593
Hpy188I	TCNGA	9 cut(s)	38, 111, 310, 481, 511, 921, 1294, 1479, 1531
Hpy8I	GTNNAC	4 cut(s)	282, 384, 1316, 1593
HpyAV	CCTTC	6 cut(s)	61, 576, 1234, 1492, 1592, 1621
HpyCH4III	ACNGT	4 cut(s)	943, 1148, 1258, 1507
HpyF3I	CTNAG	4 cut(s)	110, 309, 787, 912
Hsp92I	GRCGYC	1 cut(s)	1289
Hsp92II	CATG	9 cut(s)	416, 586, 835, 854, 884, 1199, 1231, 1304, 1653
HspAI	GCGC	1 cut(s)	982
Ksp22I	TGATCA	1 cut(s)	799
Kzo9I	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
LmnI	GCTCC	2 cut(s)	568, 574
Lsp1109I	GCAGC	7 cut(s)	260, 655, 758, 758, 977, 1255, 1573
LweI	GCATC	2 cut(s)	1165, 1195
MaeI	CTAG	1 cut(s)	75
MaeIII	GTNAC	6 cut(s)	175, 876, 1150, 1158, 1372, 1510
MalI	GATC	6 cut(s)	411, 667, 801, 987, 1308, 1419
MboI	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
MflI	RGATCY	1 cut(s)	1306
MhlI	GDGCHC	2 cut(s)	259, 1505
MluCI	AATT	6 cut(s)	30, 390, 817, 1090, 1343, 1365
MlyI	GAGTC	6 cut(s)	50, 121, 287, 358, 358, 884
MmeI	TCCRAC	3 cut(s)	392, 419, 1457
Mph1103I	ATGCAT	1 cut(s)	1180
MroXI	GAANNNNTTC	1 cut(s)	1343
MseI	TTAA	5 cut(s)	11, 291, 687, 816, 1134
MspA1I	CMGCKG	3 cut(s)	251, 749, 1640
MspCI	CTTAAG	1 cut(s)	686
MspI	CCGG	1 cut(s)	838
MspR9I	CCNGG	2 cut(s)	571, 723
Mva1269I	GAATGC	2 cut(s)	85, 1569
MvaI	CCWGG	2 cut(s)	571, 723
MvnI	CGCG	2 cut(s)	181, 984
NdeII	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
NlaIII	CATG	9 cut(s)	416, 586, 835, 854, 884, 1199, 1231, 1304, 1653
NlaIV	GGNNCC	4 cut(s)	204, 490, 564, 1045
NmeAIII	GCCGAG	1 cut(s)	1219
NmuCI	GTSAC	2 cut(s)	876, 1372
NsiI	ATGCAT	1 cut(s)	1180
NspI	RCATGY	3 cut(s)	586, 835, 854
NspV	TTCGAA	1 cut(s)	603
PaeI	GCATGC	1 cut(s)	586
PagI	TCATGA	2 cut(s)	412, 1227
PciI	ACATGT	1 cut(s)	850
PcsI	WCGNNNNNNNCGW	1 cut(s)	1483
PctI	GAATGC	2 cut(s)	85, 1569
PdmI	GAANNNNTTC	1 cut(s)	1343
PfeI	GAWTC	6 cut(s)	146, 400, 424, 1025, 1453, 1526
PflFI	GACNNNGTC	1 cut(s)	1288
PflMI	CCANNNNNTGG	1 cut(s)	975
PkrI	GCNGC	7 cut(s)	250, 645, 748, 773, 967, 1245, 1563
PleI	GAGTC	6 cut(s)	49, 120, 286, 357, 358, 883
PpsI	GAGTC	6 cut(s)	49, 120, 286, 357, 358, 883
PpuMI	RGGWCCY	1 cut(s)	617
PscI	ACATGT	1 cut(s)	850
PshBI	ATTAAT	1 cut(s)	11
Psp5II	RGGWCCY	1 cut(s)	617
Psp6I	CCWGG	2 cut(s)	569, 721
PspFI	CCCAGC	4 cut(s)	251, 577, 749, 975
PspGI	CCWGG	2 cut(s)	569, 721
PspN4I	GGNNCC	4 cut(s)	204, 490, 564, 1045
PspPI	GGNCC	6 cut(s)	488, 617, 884, 997, 1043, 1273
PspPPI	RGGWCCY	1 cut(s)	617
PstI	CTGCAG	1 cut(s)	1557
PstNI	CAGNNNCTG	1 cut(s)	975
PsuI	RGATCY	1 cut(s)	1306
PsyI	GACNNNGTC	1 cut(s)	1288
PvuII	CAGCTG	3 cut(s)	251, 749, 1640
RsaI	GTAC	2 cut(s)	945, 1075
RsaNI	GTAC	2 cut(s)	944, 1074
SaqAI	TTAA	5 cut(s)	11, 291, 687, 816, 1134
SatI	GCNGC	7 cut(s)	249, 644, 747, 772, 966, 1244, 1562
Sau3AI	GATC	6 cut(s)	409, 665, 799, 985, 1306, 1417
Sau96I	GGNCC	6 cut(s)	488, 617, 884, 997, 1043, 1273
SchI	GAGTC	6 cut(s)	50, 121, 287, 358, 358, 884
ScrFI	CCNGG	2 cut(s)	571, 723
SduI	GDGCHC	2 cut(s)	259, 1505
SfaNI	GCATC	2 cut(s)	1165, 1195
SfcI	CTRYAG	1 cut(s)	1553
SfuI	TTCGAA	1 cut(s)	603
SinI	GGWCC	4 cut(s)	617, 884, 997, 1043
SmlI	CTYRAG	1 cut(s)	686
SmoI	CTYRAG	1 cut(s)	686
SphI	GCATGC	1 cut(s)	586
Sse9I	AATT	6 cut(s)	30, 390, 817, 1090, 1343, 1365
SsiI	CCGC	2 cut(s)	181, 387
SspMI	CTAG	1 cut(s)	75
StyD4I	CCNGG	2 cut(s)	569, 721
StyI	CCWWGG	2 cut(s)	124, 219
TaaI	ACNGT	4 cut(s)	943, 1148, 1258, 1507
TaqI	TCGA	3 cut(s)	603, 664, 1468
TasI	AATT	6 cut(s)	30, 390, 817, 1090, 1343, 1365
TatI	WGTACW	1 cut(s)	1073
TfiI	GAWTC	6 cut(s)	146, 400, 424, 1025, 1453, 1526
Tru1I	TTAA	5 cut(s)	11, 291, 687, 816, 1134
Tru9I	TTAA	5 cut(s)	11, 291, 687, 816, 1134
TscAI	CASTG	4 cut(s)	874, 960, 1450, 1510
TseFI	GTSAC	2 cut(s)	876, 1372
TseI	GCWGC	7 cut(s)	248, 643, 746, 771, 965, 1243, 1561
Tsp45I	GTSAC	2 cut(s)	876, 1372
TspDTI	ATGAA	7 cut(s)	186, 1184, 1216, 1244, 1352, 1395, 1445
TspRI	CASTG	4 cut(s)	874, 960, 1450, 1510
Tth111I	GACNNNGTC	1 cut(s)	1288
Van91I	CCANNNNNTGG	1 cut(s)	975
Vha464I	CTTAAG	1 cut(s)	686
VpaK11BI	GGWCC	4 cut(s)	617, 884, 997, 1043
VspI	ATTAAT	1 cut(s)	11
XapI	RAATTY	3 cut(s)	1090, 1343, 1365
XceI	RCATGY	3 cut(s)	586, 835, 854
XmnI	GAANNNNTTC	1 cut(s)	1343
XspI	CTAG	1 cut(s)	75
Zsp2I	ATGCAT	1 cut(s)	1180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.