AT1G17100

Soul heme-binding family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0016219
Physical Location & Seq
Forward (+)
5844646 .. 5845661
1016 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G17100.1

Sequence Viewer

Length: 699 bp
ATGGCCACCGGTTTAGGCTTCTTTAAGCTCTCCTTCCTCCTTAGCCTCCTCTCCGGTGGATCAGACCTATTAGGTCCCGATGCCGAATCCGGAGTCGCCCAAATTGGGAAGTTCCCGCCGTCGTGTAACAGAATCGAATGCCCGAGCTACGAGCTGGTTCACTCCGGAAATGGATACGAAATTCGCCGGTACAACAACACCGTCTGGGTTTCCACTGAACCGATTCCAGATATCTCTCTCGTTGATGCTACCAGAACCGCTTTCTTCCAATTGTTTGCATACATTCAGGGGAAGAACGAGTATCATCAGAAGATAGAAATGACTGCTCCGGTTATCTCTCAAGTCTCACCAAGCGACGGTCCATTCTGTGAATCTTCCTTCACTGTATCATTCTACGTTCCTAAAAAGAACCAGCCTGATCCAGCTCCGTCGGAGAATCTCCACATTCAGAAATGGAACTCTAGGTACGTGGCCGTGAGACAATTCAGTGGATTCGTGTCTGATGATAGCATAGGAGAACAAGCGGCGGCGCTAGACTCGAGCCTCAAAGGTACGGCTTGGGCTAATGCAATAGCGAAAAGCAAAGAAGACGGTGGTGTTGGGTCGGATTCAGCTTACACGGTCGCTCAGTATAACTCACCCTTCGAGTTCTCCGGTCGGGTCAATGAGATTTGGTTACCGTTCGAGCTCGATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SOUL

Protein Analysis

232

Amino Acids

25.39

Weight (kDa)

4.8

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SOUL PF04832 45 - 226 8.7e-56 SOUL heme-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016219)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17100
fragaria_vesca FvH4_3g16830
malus_domestica MD10G1193800.v1.1
prunus_persica Prupe.4G150500_v2.0.a1
pyrus_communis pycom10g16760
rosa_chinensis RchiOBHm_Chr5g0028041
rosa_laevigata RLG00000033060
rosa_multiflora Rmu_sc0009432.1_g000007
rosa_roxburghii Rroxscaffold_1G00051620
rosa_rugosa Rorug05G0103700
rosa_samantha Rh5AG197300 Rh5BG195500 Rh5CG215700 Rh5DG197100
rosa_wichuraiana Rw5G017990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 2 cut(s) 89, 164
AciI CCGC 4 cut(s) 116, 258, 524, 527
AclWI GGATC 2 cut(s) 67, 413
AcoI YGGCCR 2 cut(s) 3, 471
AcsI RAATTY 1 cut(s) 180
AfaI GTAC 3 cut(s) 191, 467, 553
AfiI CCNNNNNNNGG 2 cut(s) 105, 356
AgeI ACCGGT 1 cut(s) 8
AluBI AGCT 6 cut(s) 28, 147, 154, 425, 614, 688
AluI AGCT 6 cut(s) 28, 147, 154, 425, 614, 688
Alw21I GWGCWC 1 cut(s) 690
Alw26I GTCTC 2 cut(s) 349, 472
AlwI GGATC 2 cut(s) 67, 413
Ama87I CYCGRG 2 cut(s) 142, 538
Aor13HI TCCGGA 2 cut(s) 89, 164
AoxI GGCC 2 cut(s) 3, 471
ApoI RAATTY 1 cut(s) 180
ArsI GACNNNNNNTTYG 2 cut(s) 78, 110
AsiGI ACCGGT 1 cut(s) 8
Asp700I GAANNNNTTC 1 cut(s) 222
AspLEI GCGC 1 cut(s) 532
AspS9I GGNCC 2 cut(s) 74, 359
AsuHPI GGTGA 2 cut(s) 339, 630
AvaI CYCGRG 2 cut(s) 142, 538
AvaII GGWCC 2 cut(s) 74, 359
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 690
BbsI GAAGAC 1 cut(s) 594
Bbv12I GWGCWC 1 cut(s) 690
BceAI ACGGC 3 cut(s) 103, 458, 570
BciVI GTATCC 1 cut(s) 167
BcoDI GTCTC 2 cut(s) 349, 472
BfaI CTAG 2 cut(s) 462, 533
BfoI RGCGCY 1 cut(s) 533
BfuI GTATCC 1 cut(s) 167
BisI GCNGC 2 cut(s) 525, 528
BlsI GCNGC 2 cut(s) 526, 529
Bme18I GGWCC 2 cut(s) 74, 359
BmeT110I CYCGRG 2 cut(s) 142, 538
BmgT120I GGNCC 2 cut(s) 74, 359
BmiI GGNNCC 1 cut(s) 76
BmsI GCATC 2 cut(s) 70, 235
BpiI GAAGAC 1 cut(s) 594
Bpu10I CCTNAGC 1 cut(s) 41
BpuEI CTTGAG 1 cut(s) 324
BsaAI YACGTR 1 cut(s) 469
BsaWI WCCGGW 6 cut(s) 8, 53, 89, 164, 328, 653
Bsc4I CCNNNNNNNGG 2 cut(s) 105, 356
Bse118I RCCGGY 2 cut(s) 8, 186
BseAI TCCGGA 2 cut(s) 89, 164
BseLI CCNNNNNNNGG 2 cut(s) 105, 356
BseMII CTCAG 1 cut(s) 641
BseRI GAGGAG 1 cut(s) 38
Bsh1285I CGRYCG 2 cut(s) 624, 658
BshFI GGCC 2 cut(s) 5, 473
BshTI ACCGGT 1 cut(s) 8
BsiEI CGRYCG 2 cut(s) 624, 658
BsiHKAI GWGCWC 1 cut(s) 690
BsiHKCI CYCGRG 2 cut(s) 142, 538
BsiSI CCGG 7 cut(s) 9, 54, 90, 165, 187, 329, 654
BslFI GGGAC 1 cut(s) 60
BslI CCNNNNNNNGG 2 cut(s) 105, 356
BsmAI GTCTC 2 cut(s) 349, 472
BsmFI GGGAC 1 cut(s) 60
BsmI GAATGC 1 cut(s) 143
BsnI GGCC 2 cut(s) 5, 473
BsoBI CYCGRG 2 cut(s) 142, 538
Bsp1286I GDGCHC 1 cut(s) 690
Bsp13I TCCGGA 2 cut(s) 89, 164
Bsp143I GATC 2 cut(s) 59, 418
BspACI CCGC 4 cut(s) 116, 258, 524, 527
BspANI GGCC 2 cut(s) 5, 473
BspCNI CTCAG 1 cut(s) 640
BspEI TCCGGA 2 cut(s) 89, 164
BspLI GGNNCC 1 cut(s) 76
BspPI GGATC 2 cut(s) 67, 413
BsrFI RCCGGY 2 cut(s) 8, 186
BssAI RCCGGY 2 cut(s) 8, 186
BssMI GATC 2 cut(s) 59, 418
Bst4CI ACNGT 6 cut(s) 202, 359, 385, 593, 622, 681
BstBAI YACGTR 1 cut(s) 469
BstDEI CTNAG 2 cut(s) 41, 627
BstEII GGTNACC 1 cut(s) 675
BstH2I RGCGCY 1 cut(s) 533
BstHHI GCGC 1 cut(s) 532
BstKTI GATC 2 cut(s) 62, 421
BstMAI GTCTC 2 cut(s) 349, 472
BstMBI GATC 2 cut(s) 59, 418
BstMCI CGRYCG 2 cut(s) 624, 658
BstPI GGTNACC 1 cut(s) 675
BstV2I GAAGAC 1 cut(s) 594
BsuI GTATCC 1 cut(s) 167
BsuRI GGCC 2 cut(s) 5, 473
BtsIMutI CAGTG 3 cut(s) 213, 381, 493
CfoI GCGC 1 cut(s) 532
Cfr10I RCCGGY 2 cut(s) 8, 186
Cfr13I GGNCC 2 cut(s) 74, 359
Csp6I GTAC 3 cut(s) 190, 466, 552
CspAI ACCGGT 1 cut(s) 8
CviQI GTAC 3 cut(s) 190, 466, 552
DdeI CTNAG 2 cut(s) 41, 627
DpnI GATC 2 cut(s) 61, 420
DpnII GATC 2 cut(s) 59, 418
EaeI YGGCCR 2 cut(s) 3, 471
Ecl136II GAGCTC 1 cut(s) 688
Eco24I GRGCYC 1 cut(s) 690
Eco32I GATATC 1 cut(s) 232
Eco47I GGWCC 2 cut(s) 74, 359
Eco53kI GAGCTC 1 cut(s) 688
Eco88I CYCGRG 2 cut(s) 142, 538
Eco91I GGTNACC 1 cut(s) 675
EcoICRI GAGCTC 1 cut(s) 688
EcoO109I RGGNCCY 1 cut(s) 74
EcoO65I GGTNACC 1 cut(s) 675
EcoRV GATATC 1 cut(s) 232
EcoT38I GRGCYC 1 cut(s) 690
FaiI YATR 3 cut(s) 280, 512, 633
FalI AAGNNNNNCTT 2 cut(s) 17, 49
FaqI GGGAC 1 cut(s) 60
FauI CCCGC 1 cut(s) 123
Fnu4HI GCNGC 2 cut(s) 525, 528
FriOI GRGCYC 1 cut(s) 690
Fsp4HI GCNGC 2 cut(s) 525, 528
FspBI CTAG 2 cut(s) 462, 533
GlaI GCGC 1 cut(s) 531
GluI GCNGC 2 cut(s) 525, 528
HaeII RGCGCY 1 cut(s) 533
HaeIII GGCC 2 cut(s) 5, 473
HapII CCGG 7 cut(s) 9, 54, 90, 165, 187, 329, 654
HhaI GCGC 1 cut(s) 532
Hin6I GCGC 1 cut(s) 530
HinP1I GCGC 1 cut(s) 530
HinfI GANTC 9 cut(s) 86, 93, 132, 223, 371, 436, 492, 536, 608
HpaII CCGG 7 cut(s) 9, 54, 90, 165, 187, 329, 654
HphI GGTGA 2 cut(s) 339, 630
Hpy166II GTNNAC 1 cut(s) 160
Hpy188I TCNGA 6 cut(s) 64, 309, 433, 450, 502, 607
Hpy188III TCNNGA 4 cut(s) 77, 90, 165, 227
Hpy8I GTNNAC 1 cut(s) 160
Hpy99I CGWCG 3 cut(s) 124, 359, 433
HpyAV CCTTC 3 cut(s) 43, 388, 652
HpyCH4III ACNGT 6 cut(s) 202, 359, 385, 593, 622, 681
HpyCH4IV ACGT 2 cut(s) 396, 468
HpyCH4V TGCA 2 cut(s) 278, 569
HpyF3I CTNAG 2 cut(s) 41, 627
HpySE526I ACGT 2 cut(s) 396, 468
HspAI GCGC 1 cut(s) 530
Kpn2I TCCGGA 2 cut(s) 89, 164
Kzo9I GATC 2 cut(s) 59, 418
LmnI GCTCC 2 cut(s) 331, 430
LweI GCATC 2 cut(s) 70, 235
MaeI CTAG 2 cut(s) 462, 533
MaeII ACGT 2 cut(s) 396, 468
MaeIII GTNAC 2 cut(s) 125, 675
MalI GATC 2 cut(s) 61, 420
MboI GATC 2 cut(s) 59, 418
MboII GAAGA 5 cut(s) 256, 304, 322, 366, 599
MfeI CAATTG 1 cut(s) 269
MhlI GDGCHC 1 cut(s) 690
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 102, 180, 269, 482
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 102, 530
MmeI TCCRAC 2 cut(s) 411, 585
MnlI CCTC 4 cut(s) 47, 56, 59, 554
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 2 cut(s) 89, 164
MroXI GAANNNNTTC 1 cut(s) 222
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 24, 697
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 7 cut(s) 9, 54, 90, 165, 187, 329, 654
MunI CAATTG 1 cut(s) 269
Mva1269I GAATGC 1 cut(s) 143
NdeII GATC 2 cut(s) 59, 418
NlaIV GGNNCC 1 cut(s) 76
PaeR7I CTCGAG 1 cut(s) 538
PctI GAATGC 1 cut(s) 143
PdmI GAANNNNTTC 1 cut(s) 222
PfeI GAWTC 7 cut(s) 86, 132, 223, 371, 436, 492, 608
PinAI ACCGGT 1 cut(s) 8
PkrI GCNGC 2 cut(s) 526, 529
PleI GAGTC 2 cut(s) 101, 530
PpsI GAGTC 2 cut(s) 101, 530
Ppu21I YACGTR 1 cut(s) 469
PpuMI RGGWCCY 1 cut(s) 74
Psp124BI GAGCTC 1 cut(s) 690
Psp5II RGGWCCY 1 cut(s) 74
PspEI GGTNACC 1 cut(s) 675
PspN4I GGNNCC 1 cut(s) 76
PspPI GGNCC 2 cut(s) 74, 359
PspPPI RGGWCCY 1 cut(s) 74
PspXI VCTCGAGB 1 cut(s) 538
PsrI GAACNNNNNNTAC 2 cut(s) 449, 481
RsaI GTAC 3 cut(s) 191, 467, 553
RsaNI GTAC 3 cut(s) 190, 466, 552
SacI GAGCTC 1 cut(s) 690
SaqAI TTAA 2 cut(s) 24, 697
SatI GCNGC 2 cut(s) 525, 528
Sau3AI GATC 2 cut(s) 59, 418
Sau96I GGNCC 2 cut(s) 74, 359
SchI GAGTC 2 cut(s) 102, 530
SduI GDGCHC 1 cut(s) 690
SfaNI GCATC 2 cut(s) 70, 235
Sfr274I CTCGAG 1 cut(s) 538
SinI GGWCC 2 cut(s) 74, 359
SlaI CTCGAG 1 cut(s) 538
SmlI CTYRAG 2 cut(s) 339, 538
SmoI CTYRAG 2 cut(s) 339, 538
Sse9I AATT 4 cut(s) 102, 180, 269, 482
SsiI CCGC 4 cut(s) 116, 258, 524, 527
SspMI CTAG 2 cut(s) 462, 533
SstI GAGCTC 1 cut(s) 690
TaaI ACNGT 6 cut(s) 202, 359, 385, 593, 622, 681
TaiI ACGT 2 cut(s) 399, 471
TaqI TCGA 5 cut(s) 135, 539, 645, 684, 690
TasI AATT 4 cut(s) 102, 180, 269, 482
TauI GCSGC 2 cut(s) 527, 530
TfiI GAWTC 7 cut(s) 86, 132, 223, 371, 436, 492, 608
Tru1I TTAA 2 cut(s) 24, 697
Tru9I TTAA 2 cut(s) 24, 697
TscAI CASTG 3 cut(s) 220, 388, 493
TspGWI ACGGA 1 cut(s) 417
TspRI CASTG 3 cut(s) 220, 388, 493
VpaK11BI GGWCC 2 cut(s) 74, 359
XapI RAATTY 1 cut(s) 180
XhoI CTCGAG 1 cut(s) 538
XmnI GAANNNNTTC 1 cut(s) 222
XspI CTAG 2 cut(s) 462, 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.