AT1G18550
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
6381441 .. 6384587
3147 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G18550.1

Sequence Viewer

Length: 2178 bp
ATGCCGGTATCTACTCGATCTAAGGTGATGAAACAGGAGCGAAACGAGCAAGAGAACACAAATCTGAATCTTCCGTTGAGAAATCCACATCAAGGGTTGAAGGAAAAGATGAGAGCTTTGACTCTCTTGTACGAGCAGCAAAAGAGAGCCTCTTTCTCTCTCAGGAACCCTAATCATAATCAGTCTCCGAAACCTGAAGATCAGAGATTCAAGACTCAGCTGCTTGATTCTTCCAAGAAAGGAGACAGATTTCATCGCCTGGACGGTAAAGATTCTACCTTTGTTGAAGAAGATACCAAAGAGAACAATGTATTTGAAGCAGATCGGATTTTTGGGGTTAGTTCGGTTCCTGTTAAGCCTAGTGGTGTGATTAGGAAGCTTTCAATGGGTAATGGAGCTAGAAACGTTTCGGAAGCTGAGAAATTGGAGAGTCTTAATGCTTCTGTGAGTCGGATTTTGGTGTTTGTTAGGCTTAGACCAATGGGGAAAAAGGAAAGAGAGAATGGGTCAAGGTGTTGTGTCAAGGTTTTGAATAAAAGAGATGTTTACCTAACGGAGTTTACGAATGAGAATGATTACCTTAGGCTTAAGAGGCTCCGTGTTCGTCATTTCACTTTTGATTCTTCATTTCCTGAAACTACCACACAACAAGAGGTTTATTCCACCACAACAGGAGATCTTGTTGAAGCAGTTCTTGAAGGAAGAAATGGTTCAGTTTTCTGCTACGGTGCTACGGGAGCAGGCAAGACTTATACGATGTTAGGGACAATGGAGAATCCAGGTGTAATGGTTCTAGCAATCAAAGATTTGTTTGCTAAAGTTAGACAGAGAAGCTTAGATGGGAACCATGTTGTTCATCTTTCTTATCTTGAGGTTTATAATGAAACTGTTAGAGATTTGCTTTCACCTGGTAGACCTCTCATTCTCCGTGAAGATAAGCAGGGAATTGTGGCTGCTGGTCTCACTCAATATAGAGCTTACTCAACAGATGAGGTTATGGCTTTGCTTCAAAGGGGAAATCAAAACAGAACTACCGAGCCTACTCGTTGCAATGAAACATCTTCTCGCTCACATGCCATCCTTCAGGTAATAGTGGAGTATAAGACTAGAGATGCTTCCATGAATATCATCAGCCGGGTAGGAAAGCTATCTCTCATTGATCTTGCGGGTTCTGAAAGAGCGCTAGCAACTGATCAAAGGACGCTCAGATCACTGGAAGGTGCAAACATAAACAGATCACTTCTTGCATTAAGTAGTTGCATTAACGCGCTTGTGGAAGGCAAGAAACATATTCCTTACAGAAACTCAAAGCTCACACAACTACTCAAAGACTCACTAGGCGGCTCGTGTAACACGGTGATGATTGCTAATATAAGTCCAAGCAGTCAATCTTTTGGTGAAACACAAAACACTCTCCATTGGGCTGATCGAGCCAAGGAGATTCGTGTGAAGGAATGTGAAGTAAATGAAGAGGTGGTTCAAGTGGGTGAAGAAGAAGGAGCTGATCAGGCTAAGCTTTTGTTAGAACTTCAAAAAGAGAATAGTGAATTGCGTGTCCAGCTAGCAAAGCAGCAGCAAAAGCTTTTGACTCTACAAGCAGAGAACATAGCCGCTGCTAATAACAACAACAACATTTCTCTGACACCTCCATCAATCTCATCTCTTATGACTCCACCGTCTGCATTAACAGCTCAGCAGAAGAAGAAACCAAGGCATTCGTTGTTATCAGGGACATGTTTCACACCAGAATCATTGAAAAGGACAAAAGCAGAAGAAGCTGTGAAGGAACTTCAGCTGACTGTTAAGGCATTGAAGATGGAGATGGAGAGAATGAAGAGGGAACATGGTTTGCAGATGAAGAAGCAAAAAGACGAATTAATGAAAGATCTTTGTAGTAGAAAGAGCGAGAAAACTCCAGAAAGATGCAAAGAAACAAGGAGGATTGTCACAAGAGGGAGCTTGAGACCAAAGGAGAAGGAAAAGGAACTGAAAAGTCCGAGTCATCGGTTTGCATCTCCAGTTGCAGCAGCTAAAAAGAGAAGCTTTTGGGACATAACCGTTGCTAATACTAGTCCTGCGTTGGATAGAAGGAAAACGAGAAGCCACGGTCTTGTTCATCAAGAAGCTCCTTCAAAACTGCTTCAGCCCGGGTTTGCTCGTCCACACATGAAGCATTAA

Protein Analysis

725

Amino Acids

81.77

Weight (kDa)

9.68

Isoelectric Point (pI)

48.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 152 - 301 4.2e-20 Microtubule binding
Kinesin PF00225 157 - 481 1.3e-109 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012952)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 879
AasI GACNNNNNNGTC 1 cut(s) 1675
AccI GTMKAC 1 cut(s) 913
AccII CGCG 1 cut(s) 1268
AciI CCGC 3 cut(s) 1166, 1341, 1611
AclI AACGTT 1 cut(s) 405
AcuI CTGAAG 4 cut(s) 216, 1067, 1775, 2126
AfaI GTAC 1 cut(s) 131
AfeI AGCGCT 1 cut(s) 1182
AfiI CCNNNNNNNGG 1 cut(s) 92
AflII CTTAAG 1 cut(s) 587
AflIII ACRYGT 1 cut(s) 1733
AhlI ACTAGT 1 cut(s) 2069
AjnI CCWGG 3 cut(s) 258, 778, 907
Alw26I GTCTC 4 cut(s) 189, 237, 965, 1957
Ama87I CYCGRG 1 cut(s) 2147
Aor51HI AGCGCT 1 cut(s) 1182
ApeKI GCWGC 8 cut(s) 136, 220, 953, 1570, 1573, 1613, 2024, 2027
AseI ATTAAT 1 cut(s) 1877
Asp700I GAANNNNTTC 3 cut(s) 406, 690, 709
AspLEI GCGC 2 cut(s) 1183, 1270
AsuC2I CCSGG 3 cut(s) 1136, 2148, 2149
AsuHPI GGTGA 5 cut(s) 37, 897, 1369, 1409, 1499
AsuNHI GCTAGC 2 cut(s) 1183, 1561
AvaI CYCGRG 1 cut(s) 2147
AxyI CCTNAGG 1 cut(s) 581
BauI CACGAG 1 cut(s) 1345
BbvI GCAGC 8 cut(s) 148, 207, 940, 1582, 1585, 1600, 2036, 2039
BccI CCATC 5 cut(s) 833, 1085, 1657, 1810, 1816
BciT130I CCWGG 3 cut(s) 260, 780, 909
BclI TGATCA 2 cut(s) 1192, 1504
BcnI CCSGG 3 cut(s) 1136, 2148, 2149
BcoDI GTCTC 4 cut(s) 189, 237, 965, 1957
BcuI ACTAGT 1 cut(s) 2069
BfaI CTAG 8 cut(s) 360, 399, 794, 1107, 1184, 1337, 1562, 2070
BfoI RGCGCY 1 cut(s) 1184
BfrI CTTAAG 1 cut(s) 587
BglII AGATCT 2 cut(s) 676, 1885
BlpI GCTNAGC 2 cut(s) 1512, 1692
Bme1390I CCNGG 6 cut(s) 260, 780, 909, 1136, 2148, 2149
BmeT110I CYCGRG 1 cut(s) 2147
BmiI GGNNCC 4 cut(s) 167, 348, 596, 845
BmrFI CCNGG 6 cut(s) 260, 780, 909, 1136, 2148, 2149
BmsI GCATC 3 cut(s) 1102, 1913, 2021
BmtI GCTAGC 2 cut(s) 1187, 1565
BpmI CTGGAG 2 cut(s) 1899, 2001
Bpu1102I GCTNAGC 2 cut(s) 1512, 1692
BpuEI CTTGAG 2 cut(s) 890, 1981
BpuMI CCSGG 3 cut(s) 1136, 2148, 2149
BsaI GGTCTC 2 cut(s) 965, 1957
BsaJI CCNNGG 4 cut(s) 1434, 1709, 2104, 2147
BsaXI ACNNNNNCTCC 2 cut(s) 666, 696
Bsc4I CCNNNNNNNGG 1 cut(s) 92
Bse118I RCCGGY 1 cut(s) 4
Bse1I ACTGG 2 cut(s) 1218, 2018
Bse21I CCTNAGG 1 cut(s) 581
Bse3DI GCAATG 1 cut(s) 1057
BseBI CCWGG 3 cut(s) 260, 780, 909
BseDI CCNNGG 4 cut(s) 1434, 1709, 2104, 2147
BseGI GGATG 1 cut(s) 1077
BseLI CCNNNNNNNGG 1 cut(s) 92
BseMI GCAATG 1 cut(s) 1057
BseMII CTCAG 5 cut(s) 175, 230, 408, 1219, 1706
BseNI ACTGG 2 cut(s) 1218, 2018
BseXI GCAGC 8 cut(s) 148, 207, 940, 1582, 1585, 1600, 2036, 2039
Bsh1236I CGCG 1 cut(s) 1268
BsiHKCI CYCGRG 1 cut(s) 2147
BsiSI CCGG 3 cut(s) 5, 1135, 2148
BslFI GGGAC 3 cut(s) 778, 1744, 2063
BslI CCNNNNNNNGG 1 cut(s) 92
BsmAI GTCTC 4 cut(s) 189, 237, 965, 1957
BsmFI GGGAC 3 cut(s) 778, 1744, 2063
BsmI GAATGC 1 cut(s) 1714
Bso31I GGTCTC 2 cut(s) 965, 1957
BsoBI CYCGRG 1 cut(s) 2147
Bsp1720I GCTNAGC 2 cut(s) 1512, 1692
BspACI CCGC 3 cut(s) 1166, 1341, 1611
BspCNI CTCAG 5 cut(s) 174, 229, 409, 1218, 1705
BspFNI CGCG 1 cut(s) 1268
BspLI GGNNCC 4 cut(s) 167, 348, 596, 845
BspOI GCTAGC 2 cut(s) 1187, 1565
BspTI CTTAAG 1 cut(s) 587
BspTNI GGTCTC 2 cut(s) 965, 1957
BsrDI GCAATG 1 cut(s) 1057
BsrFI RCCGGY 1 cut(s) 4
BsrI ACTGG 2 cut(s) 1218, 2018
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 4 cut(s) 1434, 1709, 2104, 2147
BssSI CACGAG 1 cut(s) 1345
BssT1I CCWWGG 2 cut(s) 1434, 1709
Bst2BI CACGAG 1 cut(s) 1345
Bst2UI CCWGG 3 cut(s) 260, 780, 909
Bst4CI ACNGT 8 cut(s) 266, 728, 889, 1357, 1677, 1801, 2059, 2108
Bst6I CTCTTC 2 cut(s) 1464, 1829
BstAFI CTTAAG 1 cut(s) 587
BstC8I GCNNGC 3 cut(s) 742, 1185, 1563
BstDSI CCRYGG 1 cut(s) 2104
BstF5I GGATG 1 cut(s) 1077
BstFNI CGCG 1 cut(s) 1268
BstH2I RGCGCY 1 cut(s) 1184
BstHHI GCGC 2 cut(s) 1183, 1270
BstMAI GTCTC 4 cut(s) 189, 237, 965, 1957
BstNI CCWGG 3 cut(s) 260, 780, 909
BstNSI RCATGY 2 cut(s) 1076, 1737
BstSCI CCNGG 6 cut(s) 258, 778, 907, 1134, 2146, 2147
BstUI CGCG 1 cut(s) 1268
BstV1I GCAGC 8 cut(s) 148, 207, 940, 1582, 1585, 1600, 2036, 2039
BstX2I RGATCY 2 cut(s) 676, 1885
BstYI RGATCY 2 cut(s) 676, 1885
Bsu36I CCTNAGG 1 cut(s) 581
BtgI CCRYGG 1 cut(s) 2104
BtgZI GCGATG 1 cut(s) 239
BtsCI GGATG 1 cut(s) 1077
BtsIMutI CAGTG 1 cut(s) 1211
Cac8I GCNNGC 3 cut(s) 742, 1185, 1563
CfoI GCGC 2 cut(s) 1183, 1270
Cfr10I RCCGGY 1 cut(s) 4
Cfr9I CCCGGG 1 cut(s) 2147
CseI GACGC 1 cut(s) 1210
CsiI ACCWGGT 1 cut(s) 907
Csp6I GTAC 1 cut(s) 130
CviAII CATG 6 cut(s) 848, 1073, 1120, 1734, 1844, 2167
CviQI GTAC 1 cut(s) 130
DrdI GACNNNNNNGTC 1 cut(s) 1675
DseDI GACNNNNNNGTC 1 cut(s) 1675
Eam1104I CTCTTC 2 cut(s) 1464, 1829
EarI CTCTTC 2 cut(s) 1464, 1829
Eco130I CCWWGG 2 cut(s) 1434, 1709
Eco31I GGTCTC 2 cut(s) 965, 1957
Eco47III AGCGCT 1 cut(s) 1182
Eco57I CTGAAG 4 cut(s) 216, 1067, 1775, 2126
Eco81I CCTNAGG 1 cut(s) 581
Eco88I CYCGRG 1 cut(s) 2147
EcoRII CCWGG 3 cut(s) 258, 778, 907
EcoT14I CCWWGG 2 cut(s) 1434, 1709
ErhI CCWWGG 2 cut(s) 1434, 1709
FaeI CATG 6 cut(s) 851, 1076, 1123, 1737, 1847, 2170
FalI AAGNNNNNCTT 4 cut(s) 678, 710, 2027, 2059
FaqI GGGAC 3 cut(s) 778, 1744, 2063
FatI CATG 6 cut(s) 847, 1072, 1119, 1733, 1843, 2166
FauI CCCGC 1 cut(s) 1159
FbaI TGATCA 2 cut(s) 1192, 1504
FblI GTMKAC 1 cut(s) 913
FokI GGATG 1 cut(s) 1064
FspBI CTAG 8 cut(s) 360, 399, 794, 1107, 1184, 1337, 1562, 2070
GlaI GCGC 2 cut(s) 1182, 1269
GsuI CTGGAG 2 cut(s) 1899, 2001
HaeII RGCGCY 1 cut(s) 1184
HapII CCGG 3 cut(s) 5, 1135, 2148
HgaI GACGC 1 cut(s) 1210
HhaI GCGC 2 cut(s) 1183, 1270
Hin1II CATG 6 cut(s) 851, 1076, 1123, 1737, 1847, 2170
Hin6I GCGC 2 cut(s) 1181, 1268
HinP1I GCGC 2 cut(s) 1181, 1268
HindIII AAGCTT 5 cut(s) 377, 832, 1514, 1580, 2041
HpaII CCGG 3 cut(s) 5, 1135, 2148
HphI GGTGA 5 cut(s) 37, 897, 1369, 1409, 1499
Hpy166II GTNNAC 4 cut(s) 547, 561, 914, 2162
Hpy188III TCNNGA 7 cut(s) 163, 211, 632, 695, 869, 1916, 2120
Hpy8I GTNNAC 4 cut(s) 547, 561, 914, 2162
HpyCH4III ACNGT 8 cut(s) 266, 728, 889, 1357, 1677, 1801, 2059, 2108
HpyCH4IV ACGT 1 cut(s) 405
HpyCH4V TGCA 9 cut(s) 1050, 1223, 1247, 1260, 1682, 1852, 1926, 2012, 2024
HpySE526I ACGT 1 cut(s) 405
Hsp92II CATG 6 cut(s) 851, 1076, 1123, 1737, 1847, 2170
HspAI GCGC 2 cut(s) 1181, 1268
Ksp22I TGATCA 2 cut(s) 1192, 1504
LmnI GCTCC 7 cut(s) 37, 395, 600, 737, 1499, 1956, 2131
Lsp1109I GCAGC 8 cut(s) 148, 207, 940, 1582, 1585, 1600, 2036, 2039
LweI GCATC 3 cut(s) 1102, 1913, 2021
MabI ACCWGGT 1 cut(s) 907
MaeI CTAG 8 cut(s) 360, 399, 794, 1107, 1184, 1337, 1562, 2070
MaeII ACGT 1 cut(s) 405
MaeIII GTNAC 2 cut(s) 1349, 1945
MflI RGATCY 2 cut(s) 676, 1885
MluCI AATT 4 cut(s) 422, 945, 1547, 1874
MlyI GAGTC 8 cut(s) 115, 208, 439, 457, 1325, 1582, 1663, 2008
MmeI TCCRAC 2 cut(s) 431, 2061
MroXI GAANNNNTTC 3 cut(s) 406, 690, 709
MseI TTAA 9 cut(s) 354, 435, 588, 1250, 1263, 1685, 1803, 1877, 2176
MslI CAYNNNNRTG 1 cut(s) 1358
MspA1I CMGCKG 3 cut(s) 220, 1613, 1795
MspCI CTTAAG 1 cut(s) 587
MspI CCGG 3 cut(s) 5, 1135, 2148
MspR9I CCNGG 6 cut(s) 260, 780, 909, 1136, 2148, 2149
Mva1269I GAATGC 1 cut(s) 1714
MvaI CCWGG 3 cut(s) 260, 780, 909
MvnI CGCG 1 cut(s) 1268
NciI CCSGG 3 cut(s) 1136, 2148, 2149
NheI GCTAGC 2 cut(s) 1183, 1561
NlaIII CATG 6 cut(s) 851, 1076, 1123, 1737, 1847, 2170
NlaIV GGNNCC 4 cut(s) 167, 348, 596, 845
NmuCI GTSAC 1 cut(s) 1945
NspI RCATGY 2 cut(s) 1076, 1737
PciI ACATGT 1 cut(s) 1733
PcsI WCGNNNNNNNCGW 1 cut(s) 560
PctI GAATGC 1 cut(s) 1714
PdmI GAANNNNTTC 3 cut(s) 406, 690, 709
PfeI GAWTC 8 cut(s) 67, 207, 227, 272, 620, 775, 1441, 1748
PleI GAGTC 8 cut(s) 115, 208, 438, 456, 1325, 1582, 1663, 2007
PpsI GAGTC 8 cut(s) 115, 208, 438, 456, 1325, 1582, 1663, 2007
PscI ACATGT 1 cut(s) 1733
PshBI ATTAAT 1 cut(s) 1877
PsiI TTATAA 1 cut(s) 879
Psp1406I AACGTT 1 cut(s) 405
Psp6I CCWGG 3 cut(s) 258, 778, 907
PspGI CCWGG 3 cut(s) 258, 778, 907
PspN4I GGNNCC 4 cut(s) 167, 348, 596, 845
PsuI RGATCY 2 cut(s) 676, 1885
PvuII CAGCTG 2 cut(s) 220, 1795
RsaI GTAC 1 cut(s) 131
RsaNI GTAC 1 cut(s) 130
RseI CAYNNNNRTG 1 cut(s) 1358
SaqAI TTAA 9 cut(s) 354, 435, 588, 1250, 1263, 1685, 1803, 1877, 2176
SchI GAGTC 8 cut(s) 115, 208, 439, 457, 1325, 1582, 1663, 2008
ScrFI CCNGG 6 cut(s) 260, 780, 909, 1136, 2148, 2149
SexAI ACCWGGT 1 cut(s) 907
SfaNI GCATC 3 cut(s) 1102, 1913, 2021
SmaI CCCGGG 1 cut(s) 2149
SmiMI CAYNNNNRTG 1 cut(s) 1358
SmlI CTYRAG 3 cut(s) 587, 869, 1960
SmoI CTYRAG 3 cut(s) 587, 869, 1960
SpeI ACTAGT 1 cut(s) 2069
Sse9I AATT 4 cut(s) 422, 945, 1547, 1874
SsiI CCGC 3 cut(s) 1166, 1341, 1611
SspMI CTAG 8 cut(s) 360, 399, 794, 1107, 1184, 1337, 1562, 2070
StyD4I CCNGG 6 cut(s) 258, 778, 907, 1134, 2146, 2147
StyI CCWWGG 2 cut(s) 1434, 1709
TaaI ACNGT 8 cut(s) 266, 728, 889, 1357, 1677, 1801, 2059, 2108
TaiI ACGT 1 cut(s) 408
TaqI TCGA 2 cut(s) 16, 1429
TasI AATT 4 cut(s) 422, 945, 1547, 1874
TauI GCSGC 2 cut(s) 1344, 1613
TfiI GAWTC 8 cut(s) 67, 207, 227, 272, 620, 775, 1441, 1748
Tru1I TTAA 9 cut(s) 354, 435, 588, 1250, 1263, 1685, 1803, 1877, 2176
Tru9I TTAA 9 cut(s) 354, 435, 588, 1250, 1263, 1685, 1803, 1877, 2176
TscAI CASTG 1 cut(s) 1218
TseFI GTSAC 1 cut(s) 1945
TseI GCWGC 8 cut(s) 136, 220, 953, 1570, 1573, 1613, 2024, 2027
Tsp45I GTSAC 1 cut(s) 1945
TspGWI ACGGA 4 cut(s) 63, 569, 587, 917
TspMI CCCGGG 1 cut(s) 2147
TspRI CASTG 1 cut(s) 1218
Vha464I CTTAAG 1 cut(s) 587
VspI ATTAAT 1 cut(s) 1877
XceI RCATGY 2 cut(s) 1076, 1737
XmaI CCCGGG 1 cut(s) 2147
XmiI GTMKAC 1 cut(s) 913
XmnI GAANNNNTTC 3 cut(s) 406, 690, 709
XspI CTAG 8 cut(s) 360, 399, 794, 1107, 1184, 1337, 1562, 2070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.