Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0012952

Physical Location & Seq

Genomic Coordinates Forward (+)

62486622 .. 62491491

Gene Structure 4870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00269700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGAGAGAGAACAACGCGATGCACAACTCCGCTGTTGCAAGAACCTACGTTCTGCCTCTGCCTCCGGCCCAGTTTCAGGCCCAAGCCCACGACGACGCGAAGGAGAATGCCGCGGTCGCCGGAACCACCACCACCGACCGGATTCTCAGCTTCACTTCGCTTCCAAGAAAGGCCAGGCCCTCGGCGACCACGGTGGCGCGGCGGCTCTCTCTCGGCGGAGGAGGAGGTGGCGGTCAGATTTCTCACGTGGCGCCGGAGATGGAGAATGTGCGAGAATTGGAGACGAAATTGGGGGTATCGGAGACAAAAGTCCCAAATTGTGGGAGCCGGATTATGGTGTTTGTGAGGCTTCGGCCGATGAGCAAGAAGGAGAAGGAGGGGGGATCTCGGTGCTGTGTGAGGATCGTGAACCGGCGTGACGTGTACTTGACGGAGTTTGCTAACGAGAACGATTTTCTGAGGCTGAAGAGGCTGAGGGGACGGCATTTCACGTTTGATGCTTCGTTTCCAGATTCTACTTCTCAGCAGGAAGTTTATTCCACCAGTACAGCTGAGCTTGTGGAAGCAGTTCTGCAGGGGAGGAATGGATCAGTTTTCTGCTATGGTGCCACGGGAGCTGGGAAAACGTACACAATGCTGGGTACTCTAGAGAGTCCGGGAGTGATGGTTTTGGCGATCAAGGACCTCTTTACAAAGATAAGGCAGAGGAGCTGTGATGGAAATCATGTGGTTCATCTGTCCTATCTTGAAGTCTATAATGAAACTGTCAGGGATTTGCTCTCCCCCGGACGGCCTCTGGTTCTTAGAGAAGATAAACAGGGAATGGTGGCAGCCGGTCTTACACAATACAGAGCTTATTCCACCGATGAAGTTATGCAATTGCTTCAGCGGGGAAACCAAAACCGAACTACTGAACCAACTCGCTGTAATGAAACTTCTTCTCGCTCCCATGCTATTTTACAGGTTGTGGTTGAATACCAGGTAAAAGATGCTTCTATGAATGTGGTCAACAGAGTAGGCAAGCTTTCACTTATTGATCTTGCCGGGTCCGAGAGAGCCCTTGCCACGGATCAGAGAACAGTAAGATCTATTGAGGGTGCCAATATAAATAGGTCACTCCTAGCACTGAGCAGCTGCATCAATGCTCTCGTGGAGGGAAAGAAGCACATACCATATCGAAATTCAAAGTTGACCCAACTTCTCAAGGATTCTCTAGGAGGAGATTGTAACACTGTAATGATTGCCAACATCAGCCCATGTAACCTCTCATTTGGTGAAACCCAAAACACCCTTCACTGGGCTGATCGAGCAAAGGAAATTAGGACCAAGGCCTCTGAGGTGAACGAGGAAGTAGTGGAAGTACCTGAATCTGAAACTGATCGTGCCAAACTATTACTTGAACTACAGAAAGAGAACCGTGAACTTCGAGTACAACTGGCACGTCATCAACAGAAACTATTAGTTGTCCAAGCACAATCCTTGGCTGCCAATGCATCTCCAACCCCTTCTTCAGCTACCTCTCTCTTGACTCCTCCGTCATCTGCCCAAGCAAATGAGAAGAGAAAACCCAGACCATCTTTCTTGGCTAGGAATTGTTTCACACCTGAATCCAAAAGAAGAGGGGCTGATGAAGGAGTTAGAGAGCTTCAAAAGACAGTAAAAGCATTAGAAGCAGAAATAGAAAGGATGAAGAAGGATCATGCTTCACAGCTAAAGCAGAAGGATAATCTTATTCGTGATCTTTCACGGAAAAGTGACCAAACACCAGCACCAGCAGTGGGGAGGGAGGGGACAAAGAGGGTAGTCACAAGGGCTAGCTTGAGACCAAAGGAGCCAAGCACAGGTGAGTTGAAGAGTCCAAGCCATCGTTTCAGGTCACCAGTCCCAACAGCGAAAAAACGAAGCTTTTGGGACATAACAACCGCAAATAGCCCATCAGTTACTACACACAATGGAAGGAAAACTAGAAGTCATGTTATTTGTGAACCACCTGCTGTTCCCTCCATGCTTCTCCAGCTTGCCTATCCATGTTTCTGCTTTGTGATATTTTTTGGACCGCACATCATCAATTATACCAGCCAGGTTTTGCACGACAAAAGCCCGAGCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0005929 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0008150 GO:0008574 GO:0009987 GO:0010938 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022411 GO:0030030 GO:0031109 GO:0031122 GO:0032984 GO:0032991 GO:0042623 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044782 GO:0051261 GO:0060404 GO:0061523 GO:0070462 GO:0071840 GO:0097435 GO:0120025 GO:0120036 GO:1903008 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

703

Amino Acids

77.79

Weight (kDa)

9.61

Isoelectric Point (pI)

49.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	110 - 260	7.3e-21	Microtubule binding
Kinesin	PF00225	116 - 440	3e-108	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012952)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18550
fragaria_vesca	FvH4_5g12880 FvH4_5g12880 FvH4_5g12880
malus_domestica	MD14G1220100.v1.1
prunus_persica	Prupe.5G214600_v2.0.a1 Prupe.5G214600_v2.0.a1 Prupe.5G214600_v2.0.a1
pyrus_communis	pycom14g18220
rosa_chinensis	RchiOBHm_Chr7g0184351
rosa_laevigata	RLG00000004983
rosa_multiflora	Rmu_sc0001557.1_g000023
rosa_roxburghii	Rroxscaffold_3G00269700
rosa_samantha	Rh7AG080800 Rh7BG066400 Rh7CG066700 Rh7DG066400
rosa_wichuraiana	Rw7G005450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1999
AasI	GACNNNNNNGTC	1 cut(s)	1534
Acc36I	ACCTGC	1 cut(s)	1999
AccB1I	GGYRCC	3 cut(s)	250, 605, 1097
AccB7I	CCANNNNNTGG	1 cut(s)	320
AccII	CGCG	4 cut(s)	17, 98, 113, 199
AclWI	GGATC	5 cut(s)	391, 410, 595, 1077, 1704
AcoI	YGGCCR	1 cut(s)	353
AcsI	RAATTY	1 cut(s)	1180
AcuI	CTGAAG	3 cut(s)	485, 869, 1494
AcvI	CACGTG	1 cut(s)	247
AcyI	GRCGYC	1 cut(s)	251
AfaI	GTAC	6 cut(s)	425, 547, 629, 643, 1362, 1431
AflIII	ACRYGT	1 cut(s)	420
AgsI	TTSAA	6 cut(s)	749, 974, 1185, 1400, 1649, 1852
AjiI	CACGTC	2 cut(s)	421, 1442
AjnI	CCWGG	3 cut(s)	173, 978, 2079
AjuI	GAANNNNNNNTTGG	4 cut(s)	1275, 1307, 1492, 1524
Alw26I	GTCTC	3 cut(s)	275, 296, 1816
AlwI	GGATC	5 cut(s)	391, 410, 595, 1077, 1704
Ama87I	CYCGRG	1 cut(s)	2101
AoxI	GGCC	7 cut(s)	66, 78, 171, 176, 353, 791, 1329
ApeKI	GCWGC	4 cut(s)	830, 1131, 1134, 1484
ApoI	RAATTY	1 cut(s)	1180
Asp700I	GAANNNNTTC	2 cut(s)	567, 1595
AspLEI	GCGC	2 cut(s)	199, 253
AspS9I	GGNCC	7 cut(s)	67, 79, 177, 682, 1047, 1323, 2054
AsuC2I	CCSGG	3 cut(s)	657, 786, 1045
AsuHPI	GGTGA	4 cut(s)	1286, 1351, 1856, 1869
AsuNHI	GCTAGC	1 cut(s)	1814
AvaI	CYCGRG	1 cut(s)	2101
AvaII	GGWCC	4 cut(s)	682, 1047, 1323, 2054
BanI	GGYRCC	3 cut(s)	250, 605, 1097
BanII	GRGCYC	1 cut(s)	1060
BarI	GAAGNNNNNNTAC	2 cut(s)	919, 951
BauI	CACGAG	1 cut(s)	1148
BbrPI	CACGTG	1 cut(s)	247
BbvCI	CCTCAGC	1 cut(s)	473
BbvI	GCAGC	4 cut(s)	842, 1121, 1143, 1471
BccI	CCATC	6 cut(s)	253, 658, 710, 1582, 1872, 1942
BceAI	ACGGC	2 cut(s)	497, 806
BciT130I	CCWGG	3 cut(s)	175, 980, 2081
BcnI	CCSGG	3 cut(s)	657, 786, 1045
BcoDI	GTCTC	3 cut(s)	275, 296, 1816
BfaI	CTAG	6 cut(s)	647, 1121, 1214, 1587, 1815, 1965
BfmI	CTRYAG	2 cut(s)	572, 1403
BfoI	RGCGCY	1 cut(s)	254
BfuAI	ACCTGC	1 cut(s)	1999
BglII	AGATCT	1 cut(s)	1085
BisI	GCNGC	7 cut(s)	111, 200, 203, 831, 1132, 1135, 1485
BlpI	GCTNAGC	1 cut(s)	552
BlsI	GCNGC	7 cut(s)	112, 201, 204, 832, 1133, 1136, 1486
Bme1390I	CCNGG	6 cut(s)	175, 657, 786, 980, 1045, 2081
Bme18I	GGWCC	4 cut(s)	682, 1047, 1323, 2054
BmeT110I	CYCGRG	1 cut(s)	2101
BmgBI	CACGTC	2 cut(s)	421, 1442
BmgT120I	GGNCC	7 cut(s)	67, 79, 177, 682, 1047, 1323, 2054
BmiI	GGNNCC	7 cut(s)	124, 252, 326, 607, 1048, 1099, 1833
BmrFI	CCNGG	6 cut(s)	175, 657, 786, 980, 1045, 2081
BmrI	ACTGGG	2 cut(s)	64, 1306
BmsI	GCATC	5 cut(s)	9, 487, 979, 1146, 1502
BmtI	GCTAGC	1 cut(s)	1818
BmuI	ACTGGG	2 cut(s)	64, 1306
BoxI	GACNNNNGTC	1 cut(s)	308
BpmI	CTGGAG	1 cut(s)	1997
Bpu10I	CCTNAGC	1 cut(s)	473
Bpu1102I	GCTNAGC	1 cut(s)	552
BpuEI	CTTGAG	2 cut(s)	1187, 1840
BpuMI	CCSGG	3 cut(s)	657, 786, 1045
BsaAI	YACGTR	1 cut(s)	247
BsaBI	GATNNNNATC	1 cut(s)	720
BsaHI	GRCGYC	1 cut(s)	251
BsaI	GGTCTC	1 cut(s)	1816
BsaJI	CCNNGG	8 cut(s)	111, 180, 189, 609, 784, 1065, 1326, 1479
BsaWI	WCCGGW	1 cut(s)	138
BsaXI	ACNNNNNCTCC	2 cut(s)	651, 681
Bse118I	RCCGGY	2 cut(s)	411, 833
Bse1I	ACTGG	5 cut(s)	70, 543, 1301, 1440, 1880
Bse8I	GATNNNNATC	1 cut(s)	720
BseBI	CCWGG	3 cut(s)	175, 980, 2081
BseDI	CCNNGG	8 cut(s)	111, 180, 189, 609, 784, 1065, 1326, 1479
BseGI	GGATG	1 cut(s)	1692
BseJI	GATNNNNATC	1 cut(s)	720
BseMII	CTCAG	7 cut(s)	160, 449, 464, 536, 543, 1118, 1326
BseNI	ACTGG	5 cut(s)	70, 543, 1301, 1440, 1880
BseRI	GAGGAG	5 cut(s)	234, 237, 721, 1233, 1521
BseX3I	CGGCCG	1 cut(s)	353
BseXI	GCAGC	4 cut(s)	842, 1121, 1143, 1471
BseYI	CCCAGC	2 cut(s)	617, 637
Bsh1236I	CGCG	4 cut(s)	17, 98, 113, 199
Bsh1285I	CGRYCG	3 cut(s)	117, 139, 356
BshFI	GGCC	7 cut(s)	68, 80, 173, 178, 355, 793, 1331
BshNI	GGYRCC	3 cut(s)	250, 605, 1097
BsiEI	CGRYCG	3 cut(s)	117, 139, 356
BsiHKCI	CYCGRG	1 cut(s)	2101
BslFI	GGGAC	5 cut(s)	296, 492, 1804, 1868, 1925
BsmAI	GTCTC	3 cut(s)	275, 296, 1816
BsmBI	CGTCTC	1 cut(s)	275
BsmFI	GGGAC	5 cut(s)	296, 492, 1804, 1868, 1925
BsmI	GAATGC	1 cut(s)	112
BsnI	GGCC	7 cut(s)	68, 80, 173, 178, 355, 793, 1331
Bso31I	GGTCTC	1 cut(s)	1816
BsoBI	CYCGRG	1 cut(s)	2101
Bsp1286I	GDGCHC	1 cut(s)	1060
Bsp1720I	GCTNAGC	1 cut(s)	552
BspANI	GGCC	7 cut(s)	68, 80, 173, 178, 355, 793, 1331
BspCNI	CTCAG	7 cut(s)	159, 450, 465, 535, 544, 1119, 1327
BspFNI	CGCG	4 cut(s)	17, 98, 113, 199
BspLI	GGNNCC	7 cut(s)	124, 252, 326, 607, 1048, 1099, 1833
BspMAI	CTGCAG	1 cut(s)	576
BspMI	ACCTGC	1 cut(s)	1999
BspOI	GCTAGC	1 cut(s)	1818
BspPI	GGATC	5 cut(s)	391, 410, 595, 1077, 1704
BspT107I	GGYRCC	3 cut(s)	250, 605, 1097
BspTNI	GGTCTC	1 cut(s)	1816
BsrFI	RCCGGY	2 cut(s)	411, 833
BsrI	ACTGG	5 cut(s)	70, 543, 1301, 1440, 1880
BssAI	RCCGGY	2 cut(s)	411, 833
BssECI	CCNNGG	8 cut(s)	111, 180, 189, 609, 784, 1065, 1326, 1479
BssNI	GRCGYC	1 cut(s)	251
BssSI	CACGAG	1 cut(s)	1148
BssT1I	CCWWGG	2 cut(s)	1326, 1479
Bst2BI	CACGAG	1 cut(s)	1148
Bst2UI	CCWGG	3 cut(s)	175, 980, 2081
Bst4CI	ACNGT	6 cut(s)	193, 766, 1081, 1234, 1418, 1657
Bst6I	CTCTTC	4 cut(s)	461, 1553, 1612, 1847
BstACI	GRCGYC	1 cut(s)	251
BstBAI	YACGTR	1 cut(s)	247
BstC8I	GCNNGC	3 cut(s)	1022, 1816, 2019
BstDEI	CTNAG	8 cut(s)	146, 458, 473, 522, 552, 803, 1127, 1335
BstDSI	CCRYGG	4 cut(s)	111, 189, 609, 1065
BstEII	GGTNACC	1 cut(s)	1875
BstF5I	GGATG	1 cut(s)	1692
BstFNI	CGCG	4 cut(s)	17, 98, 113, 199
BstH2I	RGCGCY	1 cut(s)	254
BstHHI	GCGC	2 cut(s)	199, 253
BstMAI	GTCTC	3 cut(s)	275, 296, 1816
BstMCI	CGRYCG	3 cut(s)	117, 139, 356
BstMWI	GCNNNNNNNGC	7 cut(s)	116, 469, 614, 1307, 1490, 1670, 2014
BstNI	CCWGG	3 cut(s)	175, 980, 2081
BstPAI	GACNNNNGTC	1 cut(s)	308
BstPI	GGTNACC	1 cut(s)	1875
BstSCI	CCNGG	6 cut(s)	173, 655, 784, 978, 1043, 2079
BstSFI	CTRYAG	2 cut(s)	572, 1403
BstUI	CGCG	4 cut(s)	17, 98, 113, 199
BstV1I	GCAGC	4 cut(s)	842, 1121, 1143, 1471
BstX2I	RGATCY	2 cut(s)	383, 1085
BstYI	RGATCY	2 cut(s)	383, 1085
BstZI	CGGCCG	1 cut(s)	353
BsuRI	GGCC	7 cut(s)	68, 80, 173, 178, 355, 793, 1331
BtgI	CCRYGG	4 cut(s)	111, 189, 609, 1065
BtgZI	GCGATG	1 cut(s)	32
BtrI	CACGTC	2 cut(s)	421, 1442
BtsCI	GGATG	1 cut(s)	1692
BtsI	GCAGTG	1 cut(s)	1782
BtsIMutI	CAGTG	4 cut(s)	1124, 1230, 1294, 1782
BveI	ACCTGC	1 cut(s)	1999
Cac8I	GCNNGC	3 cut(s)	1022, 1816, 2019
CfoI	GCGC	2 cut(s)	199, 253
Cfr10I	RCCGGY	2 cut(s)	411, 833
Cfr13I	GGNCC	7 cut(s)	67, 79, 177, 682, 1047, 1323, 2054
Cfr42I	CCGCGG	1 cut(s)	114
CseI	GACGC	2 cut(s)	104, 2095
CsiI	ACCWGGT	1 cut(s)	978
Csp6I	GTAC	6 cut(s)	424, 546, 628, 642, 1361, 1430
CviAII	CATG	7 cut(s)	725, 950, 1257, 1700, 1973, 2005, 2028
CviQI	GTAC	6 cut(s)	424, 546, 628, 642, 1361, 1430
DdeI	CTNAG	8 cut(s)	146, 458, 473, 522, 552, 803, 1127, 1335
DinI	GGCGCC	1 cut(s)	252
DrdI	GACNNNNNNGTC	1 cut(s)	1534
DseDI	GACNNNNNNGTC	1 cut(s)	1534
EaeI	YGGCCR	1 cut(s)	353
EagI	CGGCCG	1 cut(s)	353
Eam1104I	CTCTTC	4 cut(s)	461, 1553, 1612, 1847
EarI	CTCTTC	4 cut(s)	461, 1553, 1612, 1847
EciI	GGCGGA	1 cut(s)	231
EclXI	CGGCCG	1 cut(s)	353
Eco130I	CCWWGG	2 cut(s)	1326, 1479
Eco147I	AGGCCT	1 cut(s)	1331
Eco24I	GRGCYC	1 cut(s)	1060
Eco31I	GGTCTC	1 cut(s)	1816
Eco47I	GGWCC	4 cut(s)	682, 1047, 1323, 2054
Eco52I	CGGCCG	1 cut(s)	353
Eco57I	CTGAAG	3 cut(s)	485, 869, 1494
Eco72I	CACGTG	1 cut(s)	247
Eco88I	CYCGRG	1 cut(s)	2101
Eco91I	GGTNACC	1 cut(s)	1875
EcoO109I	RGGNCCY	2 cut(s)	177, 682
EcoO65I	GGTNACC	1 cut(s)	1875
EcoRII	CCWGG	3 cut(s)	173, 978, 2079
EcoT14I	CCWWGG	2 cut(s)	1326, 1479
EcoT22I	ATGCAT	1 cut(s)	1495
EcoT38I	GRGCYC	1 cut(s)	1060
EgeI	GGCGCC	1 cut(s)	252
EheI	GGCGCC	1 cut(s)	252
ErhI	CCWWGG	2 cut(s)	1326, 1479
Esp3I	CGTCTC	1 cut(s)	275
FaeI	CATG	7 cut(s)	728, 953, 1260, 1703, 1976, 2008, 2031
FalI	AAGNNNNNCTT	2 cut(s)	671, 703
FaqI	GGGAC	5 cut(s)	296, 492, 1804, 1868, 1925
FatI	CATG	7 cut(s)	724, 949, 1256, 1699, 1972, 2004, 2027
FauI	CCCGC	1 cut(s)	882
Fnu4HI	GCNGC	7 cut(s)	111, 200, 203, 831, 1132, 1135, 1485
FokI	GGATG	1 cut(s)	1699
FriOI	GRGCYC	1 cut(s)	1060
Fsp4HI	GCNGC	7 cut(s)	111, 200, 203, 831, 1132, 1135, 1485
FspBI	CTAG	6 cut(s)	647, 1121, 1214, 1587, 1815, 1965
GlaI	GCGC	2 cut(s)	198, 252
GluI	GCNGC	7 cut(s)	111, 200, 203, 831, 1132, 1135, 1485
GsaI	CCCAGC	2 cut(s)	621, 641
GsuI	CTGGAG	1 cut(s)	1997
HaeII	RGCGCY	1 cut(s)	254
HaeIII	GGCC	7 cut(s)	68, 80, 173, 178, 355, 793, 1331
HgaI	GACGC	2 cut(s)	104, 2095
HhaI	GCGC	2 cut(s)	199, 253
Hin1I	GRCGYC	1 cut(s)	251
Hin1II	CATG	7 cut(s)	728, 953, 1260, 1703, 1976, 2008, 2031
Hin6I	GCGC	2 cut(s)	197, 251
HinP1I	GCGC	2 cut(s)	197, 251
HincII	GTYRAC	2 cut(s)	1009, 1191
HindII	GTYRAC	2 cut(s)	1009, 1191
HindIII	AAGCTT	2 cut(s)	1022, 1903
HinfI	GANTC	8 cut(s)	142, 512, 652, 1208, 1367, 1528, 1607, 1855
HphI	GGTGA	4 cut(s)	1286, 1351, 1856, 1869
Hpy166II	GTNNAC	8 cut(s)	409, 424, 630, 1009, 1191, 1342, 1421, 1985
Hpy188I	TCNGA	8 cut(s)	237, 301, 459, 1051, 1074, 1336, 1372, 2111
Hpy188III	TCNNGA	6 cut(s)	406, 509, 647, 746, 1525, 1736
Hpy8I	GTNNAC	8 cut(s)	409, 424, 630, 1009, 1191, 1342, 1421, 1985
Hpy99I	CGWCG	2 cut(s)	95, 98
HpyAV	CCTTC	9 cut(s)	94, 361, 367, 1301, 1515, 1625, 1687, 1714, 1950
HpyCH4III	ACNGT	6 cut(s)	193, 766, 1081, 1234, 1418, 1657
HpyCH4IV	ACGT	6 cut(s)	48, 246, 420, 491, 626, 1441
HpyCH4V	TGCA	7 cut(s)	22, 38, 574, 877, 1137, 1493, 2089
HpyF10VI	GCNNNNNNNGC	7 cut(s)	116, 469, 614, 1307, 1490, 1670, 2014
HpyF3I	CTNAG	8 cut(s)	146, 458, 473, 522, 552, 803, 1127, 1335
HpySE526I	ACGT	6 cut(s)	48, 246, 420, 491, 626, 1441
Hsp92I	GRCGYC	1 cut(s)	251
Hsp92II	CATG	7 cut(s)	728, 953, 1260, 1703, 1976, 2008, 2031
HspAI	GCGC	2 cut(s)	197, 251
KasI	GGCGCC	1 cut(s)	250
KspI	CCGCGG	1 cut(s)	114
LmnI	GCTCC	5 cut(s)	324, 614, 708, 950, 1831
Lsp1109I	GCAGC	4 cut(s)	842, 1121, 1143, 1471
LweI	GCATC	5 cut(s)	9, 487, 979, 1146, 1502
MabI	ACCWGGT	1 cut(s)	978
MaeI	CTAG	6 cut(s)	647, 1121, 1214, 1587, 1815, 1965
MaeII	ACGT	6 cut(s)	48, 246, 420, 491, 626, 1441
MaeIII	GTNAC	8 cut(s)	416, 1113, 1226, 1259, 1754, 1804, 1875, 1939
MboII	GAAGA	8 cut(s)	478, 821, 930, 1500, 1570, 1629, 1702, 1864
MfeI	CAATTG	1 cut(s)	878
MflI	RGATCY	2 cut(s)	383, 1085
MhlI	GDGCHC	1 cut(s)	1060
MluCI	AATT	8 cut(s)	275, 287, 316, 878, 1180, 1317, 1591, 2068
Mly113I	GGCGCC	1 cut(s)	251
MlyI	GAGTC	3 cut(s)	661, 1522, 1864
MmeI	TCCRAC	1 cut(s)	1523
Mph1103I	ATGCAT	1 cut(s)	1495
MroXI	GAANNNNTTC	2 cut(s)	567, 1595
MslI	CAYNNNNRTG	1 cut(s)	1235
MspA1I	CMGCKG	5 cut(s)	32, 113, 551, 889, 1134
MspR9I	CCNGG	6 cut(s)	175, 657, 786, 980, 1045, 2081
MunI	CAATTG	1 cut(s)	878
Mva1269I	GAATGC	1 cut(s)	112
MvaI	CCWGG	3 cut(s)	175, 980, 2081
MvnI	CGCG	4 cut(s)	17, 98, 113, 199
MwoI	GCNNNNNNNGC	7 cut(s)	116, 469, 614, 1307, 1490, 1670, 2014
NarI	GGCGCC	1 cut(s)	251
NciI	CCSGG	3 cut(s)	657, 786, 1045
NheI	GCTAGC	1 cut(s)	1814
NlaIII	CATG	7 cut(s)	728, 953, 1260, 1703, 1976, 2008, 2031
NlaIV	GGNNCC	7 cut(s)	124, 252, 326, 607, 1048, 1099, 1833
NmeAIII	GCCGAG	2 cut(s)	161, 192
NmuCI	GTSAC	5 cut(s)	416, 1113, 1754, 1804, 1875
NsiI	ATGCAT	1 cut(s)	1495
PaqCI	CACCTGC	1 cut(s)	1999
PceI	AGGCCT	1 cut(s)	1331
PctI	GAATGC	1 cut(s)	112
PdmI	GAANNNNTTC	2 cut(s)	567, 1595
PfeI	GAWTC	5 cut(s)	142, 512, 1208, 1367, 1607
PflMI	CCANNNNNTGG	1 cut(s)	320
PfoI	TCCNGGA	1 cut(s)	655
PkrI	GCNGC	7 cut(s)	112, 201, 204, 832, 1133, 1136, 1486
PleI	GAGTC	3 cut(s)	660, 1522, 1863
PluTI	GGCGCC	1 cut(s)	254
PmaCI	CACGTG	1 cut(s)	247
PmlI	CACGTG	1 cut(s)	247
PpsI	GAGTC	3 cut(s)	660, 1522, 1863
Ppu21I	YACGTR	1 cut(s)	247
PpuMI	RGGWCCY	1 cut(s)	682
PshAI	GACNNNNGTC	1 cut(s)	308
Psp5II	RGGWCCY	1 cut(s)	682
Psp6I	CCWGG	3 cut(s)	173, 978, 2079
PspCI	CACGTG	1 cut(s)	247
PspEI	GGTNACC	1 cut(s)	1875
PspFI	CCCAGC	2 cut(s)	617, 637
PspGI	CCWGG	3 cut(s)	173, 978, 2079
PspN4I	GGNNCC	7 cut(s)	124, 252, 326, 607, 1048, 1099, 1833
PspPI	GGNCC	7 cut(s)	67, 79, 177, 682, 1047, 1323, 2054
PspPPI	RGGWCCY	1 cut(s)	682
PsrI	GAACNNNNNNTAC	2 cut(s)	1413, 1445
PstI	CTGCAG	1 cut(s)	576
PsuI	RGATCY	2 cut(s)	383, 1085
PvuII	CAGCTG	2 cut(s)	551, 1134
RsaI	GTAC	6 cut(s)	425, 547, 629, 643, 1362, 1431
RsaNI	GTAC	6 cut(s)	424, 546, 628, 642, 1361, 1430
RseI	CAYNNNNRTG	1 cut(s)	1235
SacII	CCGCGG	1 cut(s)	114
SatI	GCNGC	7 cut(s)	111, 200, 203, 831, 1132, 1135, 1485
Sau96I	GGNCC	7 cut(s)	67, 79, 177, 682, 1047, 1323, 2054
SchI	GAGTC	3 cut(s)	661, 1522, 1864
ScrFI	CCNGG	6 cut(s)	175, 657, 786, 980, 1045, 2081
SduI	GDGCHC	1 cut(s)	1060
SexAI	ACCWGGT	1 cut(s)	978
SfaNI	GCATC	5 cut(s)	9, 487, 979, 1146, 1502
SfcI	CTRYAG	2 cut(s)	572, 1403
SfoI	GGCGCC	1 cut(s)	252
Sfr303I	CCGCGG	1 cut(s)	114
SgrBI	CCGCGG	1 cut(s)	114
SinI	GGWCC	4 cut(s)	682, 1047, 1323, 2054
SmiMI	CAYNNNNRTG	1 cut(s)	1235
SmlI	CTYRAG	2 cut(s)	1202, 1819
SmoI	CTYRAG	2 cut(s)	1202, 1819
Sse9I	AATT	8 cut(s)	275, 287, 316, 878, 1180, 1317, 1591, 2068
SseBI	AGGCCT	1 cut(s)	1331
SspDI	GGCGCC	1 cut(s)	250
SspMI	CTAG	6 cut(s)	647, 1121, 1214, 1587, 1815, 1965
StuI	AGGCCT	1 cut(s)	1331
StyD4I	CCNGG	6 cut(s)	173, 655, 784, 978, 1043, 2079
StyI	CCWWGG	2 cut(s)	1326, 1479
TaaI	ACNGT	6 cut(s)	193, 766, 1081, 1234, 1418, 1657
TaiI	ACGT	6 cut(s)	51, 249, 423, 494, 629, 1444
TaqI	TCGA	3 cut(s)	1177, 1306, 1426
TasI	AATT	8 cut(s)	275, 287, 316, 878, 1180, 1317, 1591, 2068
TatI	WGTACW	3 cut(s)	423, 545, 1429
TauI	GCSGC	3 cut(s)	113, 202, 205
TfiI	GAWTC	5 cut(s)	142, 512, 1208, 1367, 1607
TscAI	CASTG	4 cut(s)	1131, 1237, 1301, 1782
TseFI	GTSAC	5 cut(s)	416, 1113, 1754, 1804, 1875
TseI	GCWGC	4 cut(s)	830, 1131, 1134, 1484
Tsp45I	GTSAC	5 cut(s)	416, 1113, 1754, 1804, 1875
TspDTI	ATGAA	7 cut(s)	722, 774, 882, 945, 1013, 1644, 1703
TspGWI	ACGGA	4 cut(s)	446, 1082, 1524, 1762
TspRI	CASTG	4 cut(s)	1131, 1237, 1301, 1782
Van91I	CCANNNNNTGG	1 cut(s)	320
VpaK11BI	GGWCC	4 cut(s)	682, 1047, 1323, 2054
XapI	RAATTY	1 cut(s)	1180
XbaI	TCTAGA	1 cut(s)	646
XmnI	GAANNNNTTC	2 cut(s)	567, 1595
XspI	CTAG	6 cut(s)	647, 1121, 1214, 1587, 1815, 1965
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.