Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0012952

Physical Location & Seq

Genomic Coordinates Reverse (-)

4408976 .. 4413957

Gene Structure 4982 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG066400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGCCTGTATCAACTCGGTCGCAAAGTGAACGGAAACCCAGGTCGGAACAAGAACAGACCCACTCGAATCTTCTTCCTCTGCGAAACCCGCACCATGGATTGAAGGAAAAGATGAAAGCTTTGACTCTACTCTACGAGCAGCAGAAGCAAGCCTCCGCAGCTCTGCGAAACTCGAAGCCCCCGGACCCGTCGGAGCTCCGACTCGCGACCCAGAAGTGTAGAAAAGAAGAGCACGAGTCGGGGCTCCGACCCGGAAGCCGGGTCGCGATGAGAGAGAACAACGCGATGCACAACTCCGCCGTTACAAGAACCTACGCTCTGCCTCTGCCTCCGGCCCAGTTTCAGGCCCAGGCCCAACGGCAAGCCCACGACGACGCGAAGGAGAATGCGGCGGTCGCCGGAACCACCACCACCACCGACCGGGTTCTCAGCTTCACTTCGCTTCCAAGAAAGGCCAGGCCCTCGACGACCGCGGTGGCGCGGCGGCTCTCCCTCGGCGGAGGAGGAGGAGGAGGTCAGATTTCTCACGTGGCGCCGGAGATGGAGAATGTGCGAGAATTGGAGACGAAATTTGGGGCTTCGGAGACGAAATTGGGAGTATCGGAGACGAAAGTCCCAAATTGTGGGAGCCGGATTATGGTGTTTGTGAGGCTTAGGCCGATGAGCAAGAAGGAGAAGGAGGGGGGTTCTCGGTGCTGTGTGAGGATCGTGAACCGGCGTGACGTGTACTTGACGGAGTTTGCGAACGAGAACGATTATCTGAGGCTGAAGAGGCTGAGGGGTCGCCATTTCACGTTTGATGCTTCGTTTCCAGATTCTACTTCTCAGCAGGAAGTTTATTCCACCAGTACAGCTGAGCTTGTGGAAGCAGTTCTGCAGGGGAGGAATGGATCAGTTTTCTGCTATGGTGCCACGGGAGCTGGGAAAACGTACACAATGCTGGGCACTCTGGAGAGTCCGGGAGTGATGGTTTTGGCGATCAAGGACCTCTTTACAAAGATAAGGCAGAGGAGCTGTGATGGAAATCATGTGGTTCATCTGTCCTATCTTGAAGTCTATAATGAAACTGTCAGGGATTTGCTCTCCCCCGGACGGCCTCTGGTTCTTAGAGAAGATAAACAGGGAATGGTGGCAGCCGGTCTTACACAATACAGAGCTTATTCCACCGATGAAGTTATGCAATTGCTTCAGCGGGGAAACCAAAACCGAACTACTGAACCAACTCGCTGTAATGAAACTTCTTCTCGCTCCCATGCTATTTTACAGGTTGTGGTTGAATACCAGGTAAAAGATGCTTCTATGAATGTGGTCAACAGAGTAGGCAAGCTTTCACTTATTGATCTTGCTGGGTCCGAGAGAGCCCTTGCCACGGATCAGAGAACAGTAAGATCTATTGAGGGTGCCAATATAAATCGGTCACTCCTAGCACTGAGCAGCTGCATCAATGCTCTCGTGGAGGGAAAGAAGCACATACCTTATCGAAATTCAAAGTTGACCCAACTTCTCAAGGATTCTCTAGGAGGAGATTGTAACACTGTAATGATTGCCAACATCAGCCCATGTAACCTCTCATTTGGTGAAACCCAAAACACCCTTCACTGGGCTGATCGAGCAAAGGAAATTAGGACCAAGGCCTCTGAGGTGAACGAGGAAGTAGTGGAAGTACCTGAATCTGAAACTGATCGTGCCAAACTATTACTTGAACTACAGAAAGAGAACCGTGAACTTCGAGTACAACTGGCACGTCATCAACAGAAACTATTAGTTGTCCAAGCACAATCCTTGGCTGCCAATGCATCTCCAACCCCTTCTTCAGCTACCTCTCTCTTGACTCCTCCGTCGTCTGCCCAAGCAAATGAGAAGAGAAAACCCAGACCATCTTTCTTGGCTAGGACTTGTTTCACACCTGAATCCAAAAGAAGAGGGGCTGATGAAGGAGTTAGAGAGCTTCAAAAGACAGTAAAAGCATTAGAAGCAGAAATAGAAAGGATGAAGAAGGATCATACTTCACAGCTAAAGCAGAAGGATAATCTTATTCGTGATCTTTCGCGGAAAAGTGACCAAACACCAGCACCAGCAGTGGGGAGGGAGGGGACAAAGAGGGTAGTCACAAGGGCTAGCTTGAGACCAAAGGAGCCAAGCACAGGTGAGTTGAAGAGTCCAAGCCATCGTTTCAGGTCACCAGTCCCAACAGCGAAAAAACGAAGCTTTTGGGACATAACAACCGCAAATAGCCCATCAGTTACTACACACAATGGAAGGAAAACTAGAAGTCATGTTATTTGTGAACCACCTGCTGTTCCCTCCATGCTTCTCCAGCTTGCCTATCCATGTTTCTGCTTTGTGATATTTTTTGGACCGCACATCATCAATTATACCAGCCAGGTTTTGCACGACAAAAGCCCGAGCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0005929 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0008150 GO:0008574 GO:0009987 GO:0010938 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022411 GO:0030030 GO:0031109 GO:0031122 GO:0032984 GO:0032991 GO:0042623 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044782 GO:0051261 GO:0060404 GO:0061523 GO:0070462 GO:0071840 GO:0097435 GO:0120025 GO:0120036 GO:1903008 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

804

Amino Acids

89.24

Weight (kDa)

9.72

Isoelectric Point (pI)

52.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	211 - 361	7.3e-21	Microtubule binding
Kinesin	PF00225	217 - 541	2.5e-108	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012952)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18550
fragaria_vesca	FvH4_5g12880 FvH4_5g12880 FvH4_5g12880
malus_domestica	MD14G1220100.v1.1
prunus_persica	Prupe.5G214600_v2.0.a1 Prupe.5G214600_v2.0.a1 Prupe.5G214600_v2.0.a1
pyrus_communis	pycom14g18220
rosa_chinensis	RchiOBHm_Chr7g0184351
rosa_laevigata	RLG00000004983
rosa_multiflora	Rmu_sc0001557.1_g000023
rosa_roxburghii	Rroxscaffold_3G00269700
rosa_samantha	Rh7AG080800 Rh7BG066400 Rh7CG066700 Rh7DG066400
rosa_wichuraiana	Rw7G005450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2302
AasI	GACNNNNNNGTC	1 cut(s)	1837
Acc36I	ACCTGC	1 cut(s)	2302
AccB1I	GGYRCC	3 cut(s)	532, 908, 1400
AccB7I	CCANNNNNTGG	1 cut(s)	623
AccII	CGCG	7 cut(s)	206, 266, 284, 377, 473, 481, 2050
AclWI	GGATC	4 cut(s)	713, 898, 1380, 2007
AcsI	RAATTY	2 cut(s)	569, 1483
AcuI	CTGAAG	3 cut(s)	788, 1172, 1797
AcvI	CACGTG	1 cut(s)	529
AcyI	GRCGYC	1 cut(s)	533
AfaI	GTAC	5 cut(s)	728, 850, 932, 1665, 1734
AflIII	ACRYGT	1 cut(s)	723
AgsI	TTSAA	7 cut(s)	103, 1052, 1277, 1488, 1703, 1952, 2155
AjiI	CACGTC	2 cut(s)	724, 1745
AjnI	CCWGG	5 cut(s)	38, 348, 455, 1281, 2382
AjuI	GAANNNNNNNTTGG	4 cut(s)	1578, 1610, 1795, 1827
Alw21I	GWGCWC	2 cut(s)	198, 234
Alw26I	GTCTC	4 cut(s)	557, 578, 599, 2119
AlwI	GGATC	4 cut(s)	713, 898, 1380, 2007
Ama87I	CYCGRG	1 cut(s)	2404
AoxI	GGCC	8 cut(s)	333, 345, 351, 453, 458, 656, 1094, 1632
ApeKI	GCWGC	6 cut(s)	139, 158, 1133, 1434, 1437, 1787
ApoI	RAATTY	2 cut(s)	569, 1483
Asp700I	GAANNNNTTC	1 cut(s)	870
AspLEI	GCGC	2 cut(s)	481, 535
AspS9I	GGNCC	9 cut(s)	184, 334, 346, 352, 459, 985, 1350, 1626, 2357
AsuC2I	CCSGG	6 cut(s)	182, 252, 260, 422, 960, 1089
AsuHPI	GGTGA	4 cut(s)	1589, 1654, 2159, 2172
AsuNHI	GCTAGC	1 cut(s)	2117
AvaI	CYCGRG	1 cut(s)	2404
AvaII	GGWCC	5 cut(s)	184, 985, 1350, 1626, 2357
BaeGI	GKGCMC	1 cut(s)	947
BanI	GGYRCC	3 cut(s)	532, 908, 1400
BanII	GRGCYC	3 cut(s)	198, 246, 1363
BarI	GAAGNNNNNNTAC	2 cut(s)	1222, 1254
BauI	CACGAG	2 cut(s)	233, 1451
BbrPI	CACGTG	1 cut(s)	529
Bbv12I	GWGCWC	2 cut(s)	198, 234
BbvCI	CCTCAGC	1 cut(s)	776
BbvI	GCAGC	6 cut(s)	151, 170, 1145, 1424, 1446, 1774
BccI	CCATC	6 cut(s)	535, 961, 1013, 1885, 2175, 2245
BceAI	ACGGC	3 cut(s)	284, 374, 1109
BciT130I	CCWGG	5 cut(s)	40, 350, 457, 1283, 2384
BcnI	CCSGG	6 cut(s)	182, 252, 260, 422, 960, 1089
BcoDI	GTCTC	4 cut(s)	557, 578, 599, 2119
BfaI	CTAG	5 cut(s)	1424, 1517, 1890, 2118, 2268
BfmI	CTRYAG	2 cut(s)	875, 1706
BfoI	RGCGCY	1 cut(s)	536
BfuAI	ACCTGC	1 cut(s)	2302
BglII	AGATCT	1 cut(s)	1388
BisI	GCNGC	9 cut(s)	140, 159, 390, 482, 485, 1134, 1435, 1438, 1788
BlpI	GCTNAGC	1 cut(s)	855
BlsI	GCNGC	9 cut(s)	141, 160, 391, 483, 486, 1135, 1436, 1439, 1789
Bme18I	GGWCC	5 cut(s)	184, 985, 1350, 1626, 2357
BmeT110I	CYCGRG	1 cut(s)	2404
BmgBI	CACGTC	2 cut(s)	724, 1745
BmgT120I	GGNCC	9 cut(s)	184, 334, 346, 352, 459, 985, 1350, 1626, 2357
BmiI	GGNNCC	9 cut(s)	186, 245, 403, 534, 629, 910, 1351, 1402, 2136
BmrI	ACTGGG	2 cut(s)	331, 1609
BmsI	GCATC	5 cut(s)	276, 790, 1282, 1449, 1805
BmtI	GCTAGC	1 cut(s)	2121
BmuI	ACTGGG	2 cut(s)	331, 1609
BoxI	GACNNNNGTC	1 cut(s)	611
BpmI	CTGGAG	2 cut(s)	971, 2300
Bpu10I	CCTNAGC	2 cut(s)	653, 776
Bpu1102I	GCTNAGC	1 cut(s)	855
BpuEI	CTTGAG	2 cut(s)	1490, 2143
BpuMI	CCSGG	6 cut(s)	182, 252, 260, 422, 960, 1089
BsaAI	YACGTR	1 cut(s)	529
BsaBI	GATNNNNATC	1 cut(s)	1023
BsaHI	GRCGYC	1 cut(s)	533
BsaI	GGTCTC	1 cut(s)	2119
BsaXI	ACNNNNNCTCC	2 cut(s)	954, 984
Bse118I	RCCGGY	2 cut(s)	714, 1136
Bse1I	ACTGG	5 cut(s)	337, 846, 1604, 1743, 2183
Bse8I	GATNNNNATC	1 cut(s)	1023
BseBI	CCWGG	5 cut(s)	40, 350, 457, 1283, 2384
BseGI	GGATG	1 cut(s)	1995
BseJI	GATNNNNATC	1 cut(s)	1023
BseMII	CTCAG	7 cut(s)	442, 752, 767, 839, 846, 1421, 1629
BseNI	ACTGG	5 cut(s)	337, 846, 1604, 1743, 2183
BseRI	GAGGAG	7 cut(s)	516, 519, 522, 525, 1024, 1536, 1824
BseSI	GKGCMC	1 cut(s)	947
BseXI	GCAGC	6 cut(s)	151, 170, 1145, 1424, 1446, 1774
BseYI	CCCAGC	3 cut(s)	920, 940, 1346
Bsh1236I	CGCG	7 cut(s)	206, 266, 284, 377, 473, 481, 2050
Bsh1285I	CGRYCG	4 cut(s)	20, 396, 421, 471
BshFI	GGCC	8 cut(s)	335, 347, 353, 455, 460, 658, 1096, 1634
BshNI	GGYRCC	3 cut(s)	532, 908, 1400
BsiEI	CGRYCG	4 cut(s)	20, 396, 421, 471
BsiHKAI	GWGCWC	2 cut(s)	198, 234
BsiHKCI	CYCGRG	1 cut(s)	2404
BslFI	GGGAC	4 cut(s)	599, 2107, 2171, 2228
BsmAI	GTCTC	4 cut(s)	557, 578, 599, 2119
BsmBI	CGTCTC	3 cut(s)	557, 578, 599
BsmFI	GGGAC	4 cut(s)	599, 2107, 2171, 2228
BsmI	GAATGC	1 cut(s)	391
BsnI	GGCC	8 cut(s)	335, 347, 353, 455, 460, 658, 1096, 1634
Bso31I	GGTCTC	1 cut(s)	2119
BsoBI	CYCGRG	1 cut(s)	2404
Bsp1286I	GDGCHC	5 cut(s)	198, 234, 246, 947, 1363
Bsp1720I	GCTNAGC	1 cut(s)	855
Bsp19I	CCATGG	1 cut(s)	94
Bsp68I	TCGCGA	2 cut(s)	206, 266
BspANI	GGCC	8 cut(s)	335, 347, 353, 455, 460, 658, 1096, 1634
BspCNI	CTCAG	7 cut(s)	441, 753, 768, 838, 847, 1422, 1630
BspFNI	CGCG	7 cut(s)	206, 266, 284, 377, 473, 481, 2050
BspLI	GGNNCC	9 cut(s)	186, 245, 403, 534, 629, 910, 1351, 1402, 2136
BspMAI	CTGCAG	1 cut(s)	879
BspMI	ACCTGC	1 cut(s)	2302
BspOI	GCTAGC	1 cut(s)	2121
BspPI	GGATC	4 cut(s)	713, 898, 1380, 2007
BspQI	GCTCTTC	1 cut(s)	222
BspT107I	GGYRCC	3 cut(s)	532, 908, 1400
BspTNI	GGTCTC	1 cut(s)	2119
BsrFI	RCCGGY	2 cut(s)	714, 1136
BsrI	ACTGG	5 cut(s)	337, 846, 1604, 1743, 2183
BssAI	RCCGGY	2 cut(s)	714, 1136
BssNI	GRCGYC	1 cut(s)	533
BssSI	CACGAG	2 cut(s)	233, 1451
BssT1I	CCWWGG	3 cut(s)	94, 1629, 1782
Bst2BI	CACGAG	2 cut(s)	233, 1451
Bst2UI	CCWGG	5 cut(s)	40, 350, 457, 1283, 2384
Bst4CI	ACNGT	5 cut(s)	1069, 1384, 1537, 1721, 1960
Bst6I	CTCTTC	5 cut(s)	222, 764, 1856, 1915, 2150
BstACI	GRCGYC	1 cut(s)	533
BstBAI	YACGTR	1 cut(s)	529
BstC8I	GCNNGC	5 cut(s)	150, 363, 1325, 2119, 2322
BstDEI	CTNAG	9 cut(s)	428, 653, 761, 776, 825, 855, 1106, 1430, 1638
BstDSI	CCRYGG	4 cut(s)	94, 471, 912, 1368
BstEII	GGTNACC	1 cut(s)	2178
BstF5I	GGATG	1 cut(s)	1995
BstFNI	CGCG	7 cut(s)	206, 266, 284, 377, 473, 481, 2050
BstH2I	RGCGCY	1 cut(s)	536
BstHHI	GCGC	2 cut(s)	481, 535
BstMAI	GTCTC	4 cut(s)	557, 578, 599, 2119
BstMCI	CGRYCG	4 cut(s)	20, 396, 421, 471
BstNI	CCWGG	5 cut(s)	40, 350, 457, 1283, 2384
BstPAI	GACNNNNGTC	1 cut(s)	611
BstPI	GGTNACC	1 cut(s)	2178
BstSFI	CTRYAG	2 cut(s)	875, 1706
BstSLI	GKGCMC	1 cut(s)	947
BstUI	CGCG	7 cut(s)	206, 266, 284, 377, 473, 481, 2050
BstV1I	GCAGC	6 cut(s)	151, 170, 1145, 1424, 1446, 1774
BstX2I	RGATCY	1 cut(s)	1388
BstYI	RGATCY	1 cut(s)	1388
BsuRI	GGCC	8 cut(s)	335, 347, 353, 455, 460, 658, 1096, 1634
BtgI	CCRYGG	4 cut(s)	94, 471, 912, 1368
BtgZI	GCGATG	2 cut(s)	281, 299
BtrI	CACGTC	2 cut(s)	724, 1745
BtsCI	GGATG	1 cut(s)	1995
BtsI	GCAGTG	1 cut(s)	2085
BtsIMutI	CAGTG	4 cut(s)	1427, 1533, 1597, 2085
BtuMI	TCGCGA	2 cut(s)	206, 266
BveI	ACCTGC	1 cut(s)	2302
Cac8I	GCNNGC	5 cut(s)	150, 363, 1325, 2119, 2322
CfoI	GCGC	2 cut(s)	481, 535
Cfr10I	RCCGGY	2 cut(s)	714, 1136
Cfr13I	GGNCC	9 cut(s)	184, 334, 346, 352, 459, 985, 1350, 1626, 2357
Cfr42I	CCGCGG	1 cut(s)	474
CseI	GACGC	2 cut(s)	383, 2398
CsiI	ACCWGGT	1 cut(s)	1281
Csp6I	GTAC	5 cut(s)	727, 849, 931, 1664, 1733
CviAII	CATG	7 cut(s)	95, 1028, 1253, 1560, 2276, 2308, 2331
CviQI	GTAC	5 cut(s)	727, 849, 931, 1664, 1733
DdeI	CTNAG	9 cut(s)	428, 653, 761, 776, 825, 855, 1106, 1430, 1638
DinI	GGCGCC	1 cut(s)	534
DrdI	GACNNNNNNGTC	1 cut(s)	1837
DseDI	GACNNNNNNGTC	1 cut(s)	1837
Eam1104I	CTCTTC	5 cut(s)	222, 764, 1856, 1915, 2150
EarI	CTCTTC	5 cut(s)	222, 764, 1856, 1915, 2150
EciI	GGCGGA	2 cut(s)	286, 513
Ecl136II	GAGCTC	1 cut(s)	196
Eco130I	CCWWGG	3 cut(s)	94, 1629, 1782
Eco147I	AGGCCT	1 cut(s)	1634
Eco24I	GRGCYC	3 cut(s)	198, 246, 1363
Eco31I	GGTCTC	1 cut(s)	2119
Eco47I	GGWCC	5 cut(s)	184, 985, 1350, 1626, 2357
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	3 cut(s)	788, 1172, 1797
Eco72I	CACGTG	1 cut(s)	529
Eco88I	CYCGRG	1 cut(s)	2404
Eco91I	GGTNACC	1 cut(s)	2178
EcoICRI	GAGCTC	1 cut(s)	196
EcoO109I	RGGNCCY	2 cut(s)	459, 985
EcoO65I	GGTNACC	1 cut(s)	2178
EcoRII	CCWGG	5 cut(s)	38, 348, 455, 1281, 2382
EcoT14I	CCWWGG	3 cut(s)	94, 1629, 1782
EcoT22I	ATGCAT	1 cut(s)	1798
EcoT38I	GRGCYC	3 cut(s)	198, 246, 1363
EgeI	GGCGCC	1 cut(s)	534
EheI	GGCGCC	1 cut(s)	534
ErhI	CCWWGG	3 cut(s)	94, 1629, 1782
Esp3I	CGTCTC	3 cut(s)	557, 578, 599
FaeI	CATG	7 cut(s)	98, 1031, 1256, 1563, 2279, 2311, 2334
FalI	AAGNNNNNCTT	2 cut(s)	974, 1006
FaqI	GGGAC	4 cut(s)	599, 2107, 2171, 2228
FatI	CATG	7 cut(s)	94, 1027, 1252, 1559, 2275, 2307, 2330
FauI	CCCGC	2 cut(s)	96, 1185
Fnu4HI	GCNGC	9 cut(s)	140, 159, 390, 482, 485, 1134, 1435, 1438, 1788
FokI	GGATG	1 cut(s)	2002
FriOI	GRGCYC	3 cut(s)	198, 246, 1363
Fsp4HI	GCNGC	9 cut(s)	140, 159, 390, 482, 485, 1134, 1435, 1438, 1788
FspBI	CTAG	5 cut(s)	1424, 1517, 1890, 2118, 2268
GlaI	GCGC	2 cut(s)	480, 534
GluI	GCNGC	9 cut(s)	140, 159, 390, 482, 485, 1134, 1435, 1438, 1788
GsaI	CCCAGC	3 cut(s)	924, 944, 1350
GsuI	CTGGAG	2 cut(s)	971, 2300
HaeII	RGCGCY	1 cut(s)	536
HaeIII	GGCC	8 cut(s)	335, 347, 353, 455, 460, 658, 1096, 1634
HgaI	GACGC	2 cut(s)	383, 2398
HhaI	GCGC	2 cut(s)	481, 535
Hin1I	GRCGYC	1 cut(s)	533
Hin1II	CATG	7 cut(s)	98, 1031, 1256, 1563, 2279, 2311, 2334
Hin6I	GCGC	2 cut(s)	479, 533
HinP1I	GCGC	2 cut(s)	479, 533
HincII	GTYRAC	2 cut(s)	1312, 1494
HindII	GTYRAC	2 cut(s)	1312, 1494
HindIII	AAGCTT	3 cut(s)	117, 1325, 2206
HphI	GGTGA	4 cut(s)	1589, 1654, 2159, 2172
Hpy166II	GTNNAC	9 cut(s)	29, 712, 727, 933, 1312, 1494, 1645, 1724, 2288
Hpy188III	TCNNGA	8 cut(s)	205, 265, 709, 812, 950, 1049, 1828, 2039
Hpy8I	GTNNAC	9 cut(s)	29, 712, 727, 933, 1312, 1494, 1645, 1724, 2288
Hpy99I	CGWCG	5 cut(s)	193, 374, 377, 469, 1843
HpyCH4III	ACNGT	5 cut(s)	1069, 1384, 1537, 1721, 1960
HpyCH4IV	ACGT	5 cut(s)	528, 723, 794, 929, 1744
HpyCH4V	TGCA	6 cut(s)	289, 877, 1180, 1440, 1796, 2392
HpyF3I	CTNAG	9 cut(s)	428, 653, 761, 776, 825, 855, 1106, 1430, 1638
HpySE526I	ACGT	5 cut(s)	528, 723, 794, 929, 1744
Hsp92I	GRCGYC	1 cut(s)	533
Hsp92II	CATG	7 cut(s)	98, 1031, 1256, 1563, 2279, 2311, 2334
HspAI	GCGC	2 cut(s)	479, 533
KasI	GGCGCC	1 cut(s)	532
KspI	CCGCGG	1 cut(s)	474
LguI	GCTCTTC	1 cut(s)	222
LmnI	GCTCC	8 cut(s)	193, 201, 249, 627, 917, 1011, 1253, 2134
Lsp1109I	GCAGC	6 cut(s)	151, 170, 1145, 1424, 1446, 1774
LweI	GCATC	5 cut(s)	276, 790, 1282, 1449, 1805
MabI	ACCWGGT	1 cut(s)	1281
MaeI	CTAG	5 cut(s)	1424, 1517, 1890, 2118, 2268
MaeII	ACGT	5 cut(s)	528, 723, 794, 929, 1744
MaeIII	GTNAC	9 cut(s)	301, 719, 1416, 1529, 1562, 2057, 2107, 2178, 2242
MfeI	CAATTG	1 cut(s)	1181
MflI	RGATCY	1 cut(s)	1388
MhlI	GDGCHC	5 cut(s)	198, 234, 246, 947, 1363
MluCI	AATT	8 cut(s)	557, 569, 590, 619, 1181, 1483, 1620, 2371
Mly113I	GGCGCC	1 cut(s)	533
MlyI	GAGTC	6 cut(s)	118, 195, 245, 964, 1825, 2167
MmeI	TCCRAC	5 cut(s)	24, 171, 223, 271, 1826
Mph1103I	ATGCAT	1 cut(s)	1798
MroXI	GAANNNNTTC	1 cut(s)	870
MslI	CAYNNNNRTG	1 cut(s)	1538
MspA1I	CMGCKG	4 cut(s)	473, 854, 1192, 1437
MunI	CAATTG	1 cut(s)	1181
Mva1269I	GAATGC	1 cut(s)	391
MvaI	CCWGG	5 cut(s)	40, 350, 457, 1283, 2384
MvnI	CGCG	7 cut(s)	206, 266, 284, 377, 473, 481, 2050
NarI	GGCGCC	1 cut(s)	533
NciI	CCSGG	6 cut(s)	182, 252, 260, 422, 960, 1089
NcoI	CCATGG	1 cut(s)	94
NheI	GCTAGC	1 cut(s)	2117
NlaIII	CATG	7 cut(s)	98, 1031, 1256, 1563, 2279, 2311, 2334
NlaIV	GGNNCC	9 cut(s)	186, 245, 403, 534, 629, 910, 1351, 1402, 2136
NmeAIII	GCCGAG	1 cut(s)	474
NmuCI	GTSAC	5 cut(s)	719, 1416, 2057, 2107, 2178
NruI	TCGCGA	2 cut(s)	206, 266
NsiI	ATGCAT	1 cut(s)	1798
PaqCI	CACCTGC	1 cut(s)	2302
PceI	AGGCCT	1 cut(s)	1634
PciSI	GCTCTTC	1 cut(s)	222
PcsI	WCGNNNNNNNCGW	1 cut(s)	740
PctI	GAATGC	1 cut(s)	391
PdmI	GAANNNNTTC	1 cut(s)	870
PfeI	GAWTC	5 cut(s)	67, 815, 1511, 1670, 1910
PflMI	CCANNNNNTGG	1 cut(s)	623
PfoI	TCCNGGA	1 cut(s)	958
PkrI	GCNGC	9 cut(s)	141, 160, 391, 483, 486, 1135, 1436, 1439, 1789
PleI	GAGTC	6 cut(s)	118, 195, 244, 963, 1825, 2166
PluTI	GGCGCC	1 cut(s)	536
PmaCI	CACGTG	1 cut(s)	529
PmlI	CACGTG	1 cut(s)	529
PpsI	GAGTC	6 cut(s)	118, 195, 244, 963, 1825, 2166
Ppu21I	YACGTR	1 cut(s)	529
PpuMI	RGGWCCY	1 cut(s)	985
PshAI	GACNNNNGTC	1 cut(s)	611
Psp124BI	GAGCTC	1 cut(s)	198
Psp5II	RGGWCCY	1 cut(s)	985
Psp6I	CCWGG	5 cut(s)	38, 348, 455, 1281, 2382
PspCI	CACGTG	1 cut(s)	529
PspEI	GGTNACC	1 cut(s)	2178
PspFI	CCCAGC	3 cut(s)	920, 940, 1346
PspGI	CCWGG	5 cut(s)	38, 348, 455, 1281, 2382
PspN4I	GGNNCC	9 cut(s)	186, 245, 403, 534, 629, 910, 1351, 1402, 2136
PspPI	GGNCC	9 cut(s)	184, 334, 346, 352, 459, 985, 1350, 1626, 2357
PspPPI	RGGWCCY	1 cut(s)	985
PsrI	GAACNNNNNNTAC	2 cut(s)	1716, 1748
PstI	CTGCAG	1 cut(s)	879
PsuI	RGATCY	1 cut(s)	1388
PvuII	CAGCTG	2 cut(s)	854, 1437
RruI	TCGCGA	2 cut(s)	206, 266
RsaI	GTAC	5 cut(s)	728, 850, 932, 1665, 1734
RsaNI	GTAC	5 cut(s)	727, 849, 931, 1664, 1733
RseI	CAYNNNNRTG	1 cut(s)	1538
SacI	GAGCTC	1 cut(s)	198
SacII	CCGCGG	1 cut(s)	474
SapI	GCTCTTC	1 cut(s)	222
SatI	GCNGC	9 cut(s)	140, 159, 390, 482, 485, 1134, 1435, 1438, 1788
Sau96I	GGNCC	9 cut(s)	184, 334, 346, 352, 459, 985, 1350, 1626, 2357
SchI	GAGTC	6 cut(s)	118, 195, 245, 964, 1825, 2167
SduI	GDGCHC	5 cut(s)	198, 234, 246, 947, 1363
SexAI	ACCWGGT	1 cut(s)	1281
SfaNI	GCATC	5 cut(s)	276, 790, 1282, 1449, 1805
SfcI	CTRYAG	2 cut(s)	875, 1706
SfoI	GGCGCC	1 cut(s)	534
Sfr303I	CCGCGG	1 cut(s)	474
SgrBI	CCGCGG	1 cut(s)	474
SinI	GGWCC	5 cut(s)	184, 985, 1350, 1626, 2357
SmiMI	CAYNNNNRTG	1 cut(s)	1538
SmlI	CTYRAG	2 cut(s)	1505, 2122
SmoI	CTYRAG	2 cut(s)	1505, 2122
Sse9I	AATT	8 cut(s)	557, 569, 590, 619, 1181, 1483, 1620, 2371
SseBI	AGGCCT	1 cut(s)	1634
SspDI	GGCGCC	1 cut(s)	532
SspMI	CTAG	5 cut(s)	1424, 1517, 1890, 2118, 2268
SstI	GAGCTC	1 cut(s)	198
StuI	AGGCCT	1 cut(s)	1634
StyI	CCWWGG	3 cut(s)	94, 1629, 1782
TaaI	ACNGT	5 cut(s)	1069, 1384, 1537, 1721, 1960
TaiI	ACGT	5 cut(s)	531, 726, 797, 932, 1747
TaqI	TCGA	6 cut(s)	65, 173, 464, 1480, 1609, 1729
TaqII	GACCGA	2 cut(s)	6, 1404
TasI	AATT	8 cut(s)	557, 569, 590, 619, 1181, 1483, 1620, 2371
TatI	WGTACW	3 cut(s)	726, 848, 1732
TauI	GCSGC	3 cut(s)	392, 484, 487
TfiI	GAWTC	5 cut(s)	67, 815, 1511, 1670, 1910
TscAI	CASTG	4 cut(s)	1434, 1540, 1604, 2085
TseFI	GTSAC	5 cut(s)	719, 1416, 2057, 2107, 2178
TseI	GCWGC	6 cut(s)	139, 158, 1133, 1434, 1437, 1787
Tsp45I	GTSAC	5 cut(s)	719, 1416, 2057, 2107, 2178
TspDTI	ATGAA	8 cut(s)	128, 1025, 1077, 1185, 1248, 1316, 1947, 2006
TspGWI	ACGGA	4 cut(s)	46, 749, 1385, 1827
TspRI	CASTG	4 cut(s)	1434, 1540, 1604, 2085
Van91I	CCANNNNNTGG	1 cut(s)	623
VpaK11BI	GGWCC	5 cut(s)	184, 985, 1350, 1626, 2357
XapI	RAATTY	2 cut(s)	569, 1483
XmnI	GAANNNNTTC	1 cut(s)	870
XspI	CTAG	5 cut(s)	1424, 1517, 1890, 2118, 2268
Zsp2I	ATGCAT	1 cut(s)	1798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.