AT1G19490
BZIP Family

basic region leucin zipper

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008817
Physical Location & Seq
Reverse (-)
6751544 .. 6754073
2530 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19490.1

Sequence Viewer

Length: 1416 bp
ATGGAGTTGGAGCCTATATCATCGAGTTGTTGCTCGTCGTCTTCTTCTTCTTCTGGGGAGGAGAATACTGCGGCGGCGAACATGACGGAGATGGAGGCGGCAGAAGCATTGGCGGATTTAGCGCAGCTTGCGATAATGCGAGAGCAGGTTTTCGAATCTGCAGCGAGTTGGGGAAGTAAAGGGAAACGGGTGAGGAAGCGAGTCAAGACTGAGTCTCCTCCTTCTGACTCGCTTTTGAAACCACCTGACTCTGATACGTTACCTACTCCGGATCTAGCTGAGGAACGATTAGTGAAAGAAGAAGAGGAAGAAGAAGAAGTTGAACCAATAACTAAAGAACTAACTAAAGCTCCGGTTAAATCTGAAATCAATGGTGAAACACCTAAACCAATTCTTGCTTCGACTCTAATAAGGTGTAGTAGATCAAATGGTTGTGGCCGATCAAGACAGAATTTAAGTGAGGCTGAAAGAGAAGAACGTAGAATCAGAAGGATATTAGCTAATAGAGAATCTGCGAGGCAGACAATTCGGCGAAGACAGGCAATGTGTGAGGAGTTGAGTAAAAAAGCAGCTGATCTGACATATGAGAATGAGAATTTGAGGAGGGAAAAGGATTGGGCTTTGAAAGAGTTTCAGTCTTTGGAGACGATTAACAAGCATTTAAAGGAACAGGTATTGAAGTCAGTAAAACCCGATACAAAAGAGCCTGAAGAATCACCCAAGCCATCACAAGTTGAGATGTCTACATCATCTACTCCGTTTTACTTCTACAACCAGAATCCATATCAGCTTTTCTGCTGGCCTCATGTTACTCAATCATCAAATCCAATGATATCGCCACTTGAATTCCCTACTTCGGGAGGAGCTTCTGCTAAAACTATTACCACGCAGGAGCATGAAAATGCTGCAGATGATAATGGGCAAAAAACTCACTTTTACGTTGTACCTTGCCCTTGGTTTCTCCCTCCTCCTGATCACAGCAATGGTGTTCCTTTCGGGCTTCAAGATACACAAAGAGGTACTTTTTCAAACGGGCACCATATCGATGATTCTTCTGCAAGACCGATGGATGTCACAGAAACTCCGCGGTCCCATCTACCAACTAGAATCAAAGAAGAGGACTCTGGTTCACCCGAAACCAGACCTTTATATGATCTCAACGAATCTGCTACTGAAGTCCTCTCAGAAGGAGGAGATGGATTTCCTGTAACGCAGCAAGCTTATAGTTTAAAGCATGAAGATGTTTCTGAGACAACTAATGGAGTTACACTGATGCCGCCTGGTCATCATGTTTTGATTTCTCTACCGGAGAAAAAGCATGGATCGTTGGCTGCAGCGGAAGCTAGAAAGAGACGGAAAGAACTCACAAGGCTCAAGAACCTCCATGGCCGTCAATGTCGGATGCAGGTCGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1

Protein Analysis

471

Amino Acids

52.63

Weight (kDa)

5.62

Isoelectric Point (pI)

62.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 156 - 218 1.9e-07 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 136, 1396
AccB1I GGYRCC 1 cut(s) 1035
AccI GTMKAC 1 cut(s) 743
AccII CGCG 1 cut(s) 1087
AccIII TCCGGA 1 cut(s) 268
AciI CCGC 8 cut(s) 71, 74, 98, 113, 1085, 1087, 1277, 1337
AclWI GGATC 2 cut(s) 279, 1330
AcoI YGGCCR 2 cut(s) 436, 1387
AcsI RAATTY 3 cut(s) 451, 595, 845
AcuI CTGAAG 2 cut(s) 729, 1194
AfaI GTAC 2 cut(s) 945, 1021
AfiI CCNNNNNNNGG 2 cut(s) 856, 857
AgsI TTSAA 7 cut(s) 238, 323, 625, 679, 845, 1004, 1029
AjnI CCWGG 1 cut(s) 1279
AjuI GAANNNNNNNTTGG 2 cut(s) 382, 414
AluBI AGCT 9 cut(s) 127, 278, 350, 500, 572, 790, 866, 1220, 1343
AluI AGCT 9 cut(s) 127, 278, 350, 500, 572, 790, 866, 1220, 1343
Alw26I GTCTC 4 cut(s) 219, 638, 1244, 1345
AlwI GGATC 2 cut(s) 279, 1330
Aor13HI TCCGGA 1 cut(s) 268
AoxI GGCC 3 cut(s) 436, 800, 1387
ApeKI GCWGC 7 cut(s) 124, 161, 569, 905, 1213, 1331, 1334
ApoI RAATTY 3 cut(s) 451, 595, 845
AspLEI GCGC 1 cut(s) 124
AspS9I GGNCC 1 cut(s) 1089
AsuHPI GGTGA 4 cut(s) 202, 386, 708, 1122
AsuII TTCGAA 1 cut(s) 153
AvaII GGWCC 1 cut(s) 1089
BaeGI GKGCMC 1 cut(s) 1038
BanI GGYRCC 1 cut(s) 1035
BbsI GAAGAC 2 cut(s) 33, 541
BbvCI CCTCAGC 1 cut(s) 279
BbvI GCAGC 7 cut(s) 136, 173, 581, 892, 1225, 1318, 1346
BccI CCATC 5 cut(s) 85, 733, 1060, 1101, 1190
BceAI ACGGC 1 cut(s) 1374
BcgI CGANNNNNNTGC 2 cut(s) 509, 543
BciT130I CCWGG 1 cut(s) 1281
BclI TGATCA 1 cut(s) 973
BcoDI GTCTC 4 cut(s) 219, 638, 1244, 1345
BfaI CTAG 3 cut(s) 275, 1104, 1344
BfmI CTRYAG 3 cut(s) 159, 906, 1332
BfuAI ACCTGC 2 cut(s) 136, 1396
Bme1390I CCNGG 1 cut(s) 1281
Bme18I GGWCC 1 cut(s) 1089
BmgT120I GGNCC 1 cut(s) 1089
BmiI GGNNCC 3 cut(s) 12, 1037, 1091
BmrFI CCNGG 1 cut(s) 1281
BmsI GCATC 2 cut(s) 1263, 1392
BpiI GAAGAC 2 cut(s) 33, 541
Bpu10I CCTNAGC 1 cut(s) 279
Bpu14I TTCGAA 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 1358
Bsa29I ATCGAT 1 cut(s) 1044
BsaJI CCNNGG 3 cut(s) 953, 1085, 1384
BsaWI WCCGGW 3 cut(s) 268, 352, 1306
BsaXI ACNNNNNCTCC 6 cut(s) 199, 229, 334, 364, 1066, 1096
Bsc4I CCNNNNNNNGG 2 cut(s) 856, 857
Bse3DI GCAATG 2 cut(s) 549, 988
BseAI TCCGGA 1 cut(s) 268
BseBI CCWGG 1 cut(s) 1281
BseCI ATCGAT 1 cut(s) 1044
BseDI CCNNGG 3 cut(s) 953, 1085, 1384
BseGI GGATG 2 cut(s) 1075, 1407
BseLI CCNNNNNNNGG 2 cut(s) 856, 857
BseMI GCAATG 2 cut(s) 549, 988
BseMII CTCAG 4 cut(s) 201, 270, 1197, 1239
BseRI GAGGAG 7 cut(s) 74, 207, 566, 616, 876, 957, 1206
BseSI GKGCMC 1 cut(s) 1038
BseXI GCAGC 7 cut(s) 136, 173, 581, 892, 1225, 1318, 1346
Bsh1236I CGCG 1 cut(s) 1087
BshFI GGCC 3 cut(s) 438, 802, 1389
BshNI GGYRCC 1 cut(s) 1035
BshVI ATCGAT 1 cut(s) 1044
BsiSI CCGG 3 cut(s) 269, 353, 1307
BslFI GGGAC 1 cut(s) 1075
BslI CCNNNNNNNGG 2 cut(s) 856, 857
BsmAI GTCTC 4 cut(s) 219, 638, 1244, 1345
BsmBI CGTCTC 2 cut(s) 638, 1345
BsmFI GGGAC 1 cut(s) 1075
BsnI GGCC 3 cut(s) 438, 802, 1389
Bsp119I TTCGAA 1 cut(s) 153
Bsp1286I GDGCHC 1 cut(s) 1038
Bsp13I TCCGGA 1 cut(s) 268
Bsp143I GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
Bsp19I CCATGG 1 cut(s) 1384
BspACI CCGC 8 cut(s) 71, 74, 98, 113, 1085, 1087, 1277, 1337
BspANI GGCC 3 cut(s) 438, 802, 1389
BspCNI CTCAG 4 cut(s) 202, 271, 1196, 1240
BspDI ATCGAT 1 cut(s) 1044
BspEI TCCGGA 1 cut(s) 268
BspFNI CGCG 1 cut(s) 1087
BspLI GGNNCC 3 cut(s) 12, 1037, 1091
BspMAI CTGCAG 3 cut(s) 163, 910, 1336
BspMI ACCTGC 2 cut(s) 136, 1396
BspPI GGATC 2 cut(s) 279, 1330
BspT104I TTCGAA 1 cut(s) 153
BspT107I GGYRCC 1 cut(s) 1035
BsrDI GCAATG 2 cut(s) 549, 988
BssECI CCNNGG 3 cut(s) 953, 1085, 1384
BssMI GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
BssT1I CCWWGG 2 cut(s) 953, 1384
Bst2UI CCWGG 1 cut(s) 1281
Bst6I CTCTTC 2 cut(s) 297, 1110
BstBI TTCGAA 1 cut(s) 153
BstC8I GCNNGC 3 cut(s) 129, 800, 1218
BstDEI CTNAG 4 cut(s) 210, 279, 1183, 1248
BstDSI CCRYGG 2 cut(s) 1085, 1384
BstF5I GGATG 2 cut(s) 1075, 1407
BstFNI CGCG 1 cut(s) 1087
BstHHI GCGC 1 cut(s) 124
BstKTI GATC 7 cut(s) 274, 425, 443, 577, 976, 1156, 1325
BstMAI GTCTC 4 cut(s) 219, 638, 1244, 1345
BstMBI GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
BstMWI GCNNNNNNNGC 4 cut(s) 104, 119, 128, 1340
BstNI CCWGG 1 cut(s) 1281
BstSCI CCNGG 1 cut(s) 1279
BstSFI CTRYAG 3 cut(s) 159, 906, 1332
BstSLI GKGCMC 1 cut(s) 1038
BstUI CGCG 1 cut(s) 1087
BstV1I GCAGC 7 cut(s) 136, 173, 581, 892, 1225, 1318, 1346
BstV2I GAAGAC 2 cut(s) 33, 541
BstX2I RGATCY 1 cut(s) 271
BstYI RGATCY 1 cut(s) 271
Bsu15I ATCGAT 1 cut(s) 1044
BsuRI GGCC 3 cut(s) 438, 802, 1389
BsuTUI ATCGAT 1 cut(s) 1044
BtgI CCRYGG 2 cut(s) 1085, 1384
BtsCI GGATG 2 cut(s) 1075, 1407
BtsIMutI CAGTG 1 cut(s) 1268
BveI ACCTGC 2 cut(s) 136, 1396
Cac8I GCNNGC 3 cut(s) 129, 800, 1218
CfoI GCGC 1 cut(s) 124
Cfr13I GGNCC 1 cut(s) 1089
Cfr42I CCGCGG 1 cut(s) 1088
ClaI ATCGAT 1 cut(s) 1044
Csp6I GTAC 2 cut(s) 944, 1020
CviAII CATG 7 cut(s) 82, 806, 896, 1235, 1289, 1319, 1385
CviQI GTAC 2 cut(s) 944, 1020
DdeI CTNAG 4 cut(s) 210, 279, 1183, 1248
DpnI GATC 7 cut(s) 273, 424, 442, 576, 975, 1155, 1324
DpnII GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
DraI TTTAAA 2 cut(s) 663, 1230
EaeI YGGCCR 2 cut(s) 436, 1387
Eam1104I CTCTTC 2 cut(s) 297, 1110
EarI CTCTTC 2 cut(s) 297, 1110
EciI GGCGGA 1 cut(s) 128
Eco130I CCWWGG 2 cut(s) 953, 1384
Eco32I GATATC 1 cut(s) 834
Eco47I GGWCC 1 cut(s) 1089
Eco57I CTGAAG 2 cut(s) 729, 1194
EcoRI GAATTC 1 cut(s) 845
EcoRII CCWGG 1 cut(s) 1279
EcoRV GATATC 1 cut(s) 834
EcoT14I CCWWGG 2 cut(s) 953, 1384
ErhI CCWWGG 2 cut(s) 953, 1384
Esp3I CGTCTC 2 cut(s) 638, 1345
FaeI CATG 7 cut(s) 85, 809, 899, 1238, 1292, 1322, 1388
FalI AAGNNNNNCTT 2 cut(s) 1006, 1038
FaqI GGGAC 1 cut(s) 1075
FatI CATG 7 cut(s) 81, 805, 895, 1234, 1288, 1318, 1384
FauNDI CATATG 1 cut(s) 583
FbaI TGATCA 1 cut(s) 973
FblI GTMKAC 1 cut(s) 743
FokI GGATG 1 cut(s) 1082
FspBI CTAG 3 cut(s) 275, 1104, 1344
GlaI GCGC 1 cut(s) 123
HaeIII GGCC 3 cut(s) 438, 802, 1389
HapII CCGG 3 cut(s) 269, 353, 1307
HhaI GCGC 1 cut(s) 124
Hin1II CATG 7 cut(s) 85, 809, 899, 1238, 1292, 1322, 1388
Hin6I GCGC 1 cut(s) 122
HinP1I GCGC 1 cut(s) 122
HindIII AAGCTT 1 cut(s) 1218
HpaII CCGG 3 cut(s) 269, 353, 1307
HphI GGTGA 4 cut(s) 202, 386, 708, 1122
Hpy166II GTNNAC 2 cut(s) 744, 1130
Hpy188I TCNGA 9 cut(s) 226, 253, 364, 488, 579, 1186, 1249, 1401, 1412
Hpy188III TCNNGA 7 cut(s) 205, 269, 444, 858, 971, 1004, 1375
Hpy8I GTNNAC 2 cut(s) 744, 1130
Hpy99I CGWCG 1 cut(s) 40
HpyAV CCTTC 3 cut(s) 231, 483, 1181
HpyCH4IV ACGT 3 cut(s) 257, 478, 939
HpyCH4V TGCA 5 cut(s) 161, 908, 1058, 1334, 1405
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 119, 128, 1340
HpyF3I CTNAG 4 cut(s) 210, 279, 1183, 1248
HpySE526I ACGT 3 cut(s) 257, 478, 939
Hsp92II CATG 7 cut(s) 85, 809, 899, 1238, 1292, 1322, 1388
HspAI GCGC 1 cut(s) 122
Kpn2I TCCGGA 1 cut(s) 268
Ksp22I TGATCA 1 cut(s) 973
KspI CCGCGG 1 cut(s) 1088
Kzo9I GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
LmnI GCTCC 4 cut(s) 10, 355, 863, 892
Lsp1109I GCAGC 7 cut(s) 136, 173, 581, 892, 1225, 1318, 1346
LweI GCATC 2 cut(s) 1263, 1392
MaeI CTAG 3 cut(s) 275, 1104, 1344
MaeII ACGT 3 cut(s) 257, 478, 939
MaeIII GTNAC 5 cut(s) 258, 808, 1072, 1207, 1264
MalI GATC 7 cut(s) 273, 424, 442, 576, 975, 1155, 1324
MboI GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
MflI RGATCY 1 cut(s) 271
MhlI GDGCHC 1 cut(s) 1038
MluCI AATT 5 cut(s) 390, 451, 525, 595, 845
MlyI GAGTC 6 cut(s) 210, 221, 221, 242, 397, 1115
MmeI TCCRAC 2 cut(s) 1379, 1390
MroI TCCGGA 1 cut(s) 268
MseI TTAA 5 cut(s) 357, 455, 651, 662, 1229
MslI CAYNNNNRTG 4 cut(s) 900, 981, 1044, 1239
MspA1I CMGCKG 3 cut(s) 572, 1087, 1337
MspI CCGG 3 cut(s) 269, 353, 1307
MspR9I CCNGG 1 cut(s) 1281
MvaI CCWGG 1 cut(s) 1281
MvnI CGCG 1 cut(s) 1087
MwoI GCNNNNNNNGC 4 cut(s) 104, 119, 128, 1340
NcoI CCATGG 1 cut(s) 1384
NdeI CATATG 1 cut(s) 583
NdeII GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
NlaIII CATG 7 cut(s) 85, 809, 899, 1238, 1292, 1322, 1388
NlaIV GGNNCC 3 cut(s) 12, 1037, 1091
NmuCI GTSAC 1 cut(s) 1072
NspV TTCGAA 1 cut(s) 153
PfeI GAWTC 8 cut(s) 155, 483, 509, 713, 778, 1049, 1107, 1163
PflFI GACNNNGTC 1 cut(s) 211
PleI GAGTC 6 cut(s) 209, 220, 221, 242, 397, 1115
PpsI GAGTC 6 cut(s) 209, 220, 221, 242, 397, 1115
Psp6I CCWGG 1 cut(s) 1279
PspGI CCWGG 1 cut(s) 1279
PspN4I GGNNCC 3 cut(s) 12, 1037, 1091
PspPI GGNCC 1 cut(s) 1089
PstI CTGCAG 3 cut(s) 163, 910, 1336
PsuI RGATCY 1 cut(s) 271
PsyI GACNNNGTC 1 cut(s) 211
PvuII CAGCTG 1 cut(s) 572
RsaI GTAC 2 cut(s) 945, 1021
RsaNI GTAC 2 cut(s) 944, 1020
RseI CAYNNNNRTG 4 cut(s) 900, 981, 1044, 1239
SacII CCGCGG 1 cut(s) 1088
SaqAI TTAA 5 cut(s) 357, 455, 651, 662, 1229
Sau3AI GATC 7 cut(s) 271, 422, 440, 574, 973, 1153, 1322
Sau96I GGNCC 1 cut(s) 1089
SchI GAGTC 6 cut(s) 210, 221, 221, 242, 397, 1115
ScrFI CCNGG 1 cut(s) 1281
SduI GDGCHC 1 cut(s) 1038
SfaNI GCATC 2 cut(s) 1263, 1392
SfcI CTRYAG 3 cut(s) 159, 906, 1332
Sfr303I CCGCGG 1 cut(s) 1088
SfuI TTCGAA 1 cut(s) 153
SgrBI CCGCGG 1 cut(s) 1088
SinI GGWCC 1 cut(s) 1089
SmiMI CAYNNNNRTG 4 cut(s) 900, 981, 1044, 1239
SmlI CTYRAG 1 cut(s) 1373
SmoI CTYRAG 1 cut(s) 1373
Sse9I AATT 5 cut(s) 390, 451, 525, 595, 845
SsiI CCGC 8 cut(s) 71, 74, 98, 113, 1085, 1087, 1277, 1337
SspMI CTAG 3 cut(s) 275, 1104, 1344
StyD4I CCNGG 1 cut(s) 1279
StyI CCWWGG 2 cut(s) 953, 1384
TaiI ACGT 3 cut(s) 260, 481, 942
TaqI TCGA 4 cut(s) 23, 153, 401, 1044
TaqII GACCGA 1 cut(s) 1078
TasI AATT 5 cut(s) 390, 451, 525, 595, 845
TauI GCSGC 4 cut(s) 74, 77, 101, 1279
TfiI GAWTC 8 cut(s) 155, 483, 509, 713, 778, 1049, 1107, 1163
Tru1I TTAA 5 cut(s) 357, 455, 651, 662, 1229
Tru9I TTAA 5 cut(s) 357, 455, 651, 662, 1229
TscAI CASTG 1 cut(s) 1275
TseFI GTSAC 1 cut(s) 1072
TseI GCWGC 7 cut(s) 124, 161, 569, 905, 1213, 1331, 1334
Tsp45I GTSAC 1 cut(s) 1072
TspDTI ATGAA 2 cut(s) 912, 1251
TspGWI ACGGA 3 cut(s) 101, 747, 1369
TspRI CASTG 1 cut(s) 1275
Tth111I GACNNNGTC 1 cut(s) 211
VpaK11BI GGWCC 1 cut(s) 1089
XapI RAATTY 3 cut(s) 451, 595, 845
XmiI GTMKAC 1 cut(s) 743
XspI CTAG 3 cut(s) 275, 1104, 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.