basic region leucin zipper
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19490 |
| fragaria_vesca | FvH4_6g18250 FvH4_6g18250 FvH4_6g18250 FvH4_6g18250 |
| malus_domestica | MD12G1022300.v1.1 MD14G1019200.v1.1 |
| prunus_persica | Prupe.7G114400_v2.0.a1 Prupe.7G114400_v2.0.a1 |
| pyrus_communis | pycom12g02070 pycom14g01890 |
| rosa_chinensis | RchiOBHm_Chr3g0472661 |
| rosa_laevigata | RLG00000024065 |
| rosa_multiflora | Rmu_sc0003510.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00408740 |
| rosa_rugosa | Rorug03G0127000 Rorug03G0127000 Rorug03G0127000 |
| rosa_samantha | Rh3AG179700 Rh3BG205600 Rh3CG202700 Rh3DG170200 |
| rosa_wichuraiana | Rw3G016300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 403 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 980 |
| AccBSI | CCGCTC | 1 cut(s) | 550 |
| AccII | CGCG | 3 cut(s) | 119, 167, 215 |
| AccIII | TCCGGA | 1 cut(s) | 319 |
| AclWI | GGATC | 2 cut(s) | 132, 330 |
| AcoI | YGGCCR | 2 cut(s) | 570, 948 |
| AcsI | RAATTY | 3 cut(s) | 523, 667, 910 |
| AcuI | CTGAAG | 2 cut(s) | 422, 474 |
| AdeI | CACNNNGTG | 1 cut(s) | 785 |
| AfaI | GTAC | 2 cut(s) | 985, 1163 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 18, 980, 1310 |
| AflIII | ACRYGT | 1 cut(s) | 928 |
| AgeI | ACCGGT | 1 cut(s) | 877 |
| AgsI | TTSAA | 6 cut(s) | 292, 736, 909, 1182, 1272, 1598 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 600 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 671, 703 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1024, 1056 |
| Alw21I | GWGCWC | 2 cut(s) | 35, 147 |
| Alw26I | GTCTC | 1 cut(s) | 273 |
| AlwI | GGATC | 2 cut(s) | 132, 330 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 418, 616 |
| Ama87I | CYCGRG | 1 cut(s) | 146 |
| Aor13HI | TCCGGA | 1 cut(s) | 319 |
| AoxI | GGCC | 6 cut(s) | 243, 570, 690, 887, 948, 1600 |
| ApeKI | GCWGC | 4 cut(s) | 507, 641, 1544, 1547 |
| ApoI | RAATTY | 3 cut(s) | 523, 667, 910 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 79, 111, 582, 614 |
| AsiGI | ACCGGT | 1 cut(s) | 877 |
| AspLEI | GCGC | 5 cut(s) | 119, 163, 178, 206, 1618 |
| AspS9I | GGNCC | 4 cut(s) | 243, 337, 1331, 1352 |
| AsuC2I | CCSGG | 2 cut(s) | 276, 296 |
| AsuHPI | GGTGA | 3 cut(s) | 145, 766, 822 |
| AvaI | CYCGRG | 1 cut(s) | 146 |
| AvaII | GGWCC | 3 cut(s) | 337, 1331, 1352 |
| AxyI | CCTNAGG | 2 cut(s) | 1341, 1356 |
| BaeGI | GKGCMC | 1 cut(s) | 1064 |
| BalI | TGGCCA | 2 cut(s) | 572, 950 |
| BanII | GRGCYC | 2 cut(s) | 35, 147 |
| BbsI | GAAGAC | 3 cut(s) | 63, 410, 897 |
| Bbv12I | GWGCWC | 2 cut(s) | 35, 147 |
| BbvCI | CCTCAGC | 1 cut(s) | 1551 |
| BbvI | GCAGC | 4 cut(s) | 519, 628, 1531, 1559 |
| BccI | CCATC | 7 cut(s) | 124, 502, 739, 940, 964, 1249, 1304 |
| BceAI | ACGGC | 1 cut(s) | 63 |
| BcnI | CCSGG | 2 cut(s) | 276, 296 |
| BcoDI | GTCTC | 1 cut(s) | 273 |
| BfaI | CTAG | 3 cut(s) | 834, 1170, 1407 |
| BfmI | CTRYAG | 1 cut(s) | 1545 |
| BfoI | RGCGCY | 2 cut(s) | 164, 207 |
| BfuAI | ACCTGC | 1 cut(s) | 403 |
| BlpI | GCTNAGC | 1 cut(s) | 441 |
| Bme1390I | CCNGG | 2 cut(s) | 276, 296 |
| Bme18I | GGWCC | 3 cut(s) | 337, 1331, 1352 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 600 |
| BmeT110I | CYCGRG | 1 cut(s) | 146 |
| BmgT120I | GGNCC | 4 cut(s) | 243, 337, 1331, 1352 |
| BmiI | GGNNCC | 2 cut(s) | 43, 1315 |
| BmrFI | CCNGG | 2 cut(s) | 276, 296 |
| BmrI | ACTGGG | 1 cut(s) | 1102 |
| BmsI | GCATC | 5 cut(s) | 177, 439, 801, 1412, 1525 |
| BmuI | ACTGGG | 1 cut(s) | 1102 |
| BpiI | GAAGAC | 3 cut(s) | 63, 410, 897 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 253, 285, 598, 630 |
| Bpu10I | CCTNAGC | 2 cut(s) | 750, 1551 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 441 |
| BpuMI | CCSGG | 2 cut(s) | 276, 296 |
| BsaJI | CCNNGG | 3 cut(s) | 45, 213, 1064 |
| BsaWI | WCCGGW | 2 cut(s) | 319, 877 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 692, 722, 1024, 1054 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 18, 980, 1310 |
| Bse118I | RCCGGY | 2 cut(s) | 877, 1602 |
| Bse1I | ACTGG | 4 cut(s) | 43, 1108, 1159, 1533 |
| Bse21I | CCTNAGG | 2 cut(s) | 1341, 1356 |
| Bse3DI | GCAATG | 3 cut(s) | 368, 430, 1210 |
| BseAI | TCCGGA | 1 cut(s) | 319 |
| BseDI | CCNNGG | 3 cut(s) | 45, 213, 1064 |
| BseGI | GGATG | 4 cut(s) | 135, 1071, 1315, 1540 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 18, 980, 1310 |
| BseMI | GCAATG | 3 cut(s) | 368, 430, 1210 |
| BseMII | CTCAG | 7 cut(s) | 344, 399, 410, 432, 522, 1310, 1542 |
| BseNI | ACTGG | 4 cut(s) | 43, 1108, 1159, 1533 |
| BseRI | GAGGAG | 6 cut(s) | 155, 261, 548, 551, 638, 1579 |
| BseSI | GKGCMC | 1 cut(s) | 1064 |
| BseXI | GCAGC | 4 cut(s) | 519, 628, 1531, 1559 |
| BsgI | GTGCAG | 1 cut(s) | 827 |
| Bsh1236I | CGCG | 3 cut(s) | 119, 167, 215 |
| Bsh1285I | CGRYCG | 1 cut(s) | 23 |
| BshFI | GGCC | 6 cut(s) | 245, 572, 692, 889, 950, 1602 |
| BshTI | ACCGGT | 1 cut(s) | 877 |
| BsiEI | CGRYCG | 1 cut(s) | 23 |
| BsiHKAI | GWGCWC | 2 cut(s) | 35, 147 |
| BsiHKCI | CYCGRG | 1 cut(s) | 146 |
| BsiSI | CCGG | 5 cut(s) | 275, 296, 320, 878, 1603 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 18, 980, 1310 |
| BsmAI | GTCTC | 1 cut(s) | 273 |
| BsnI | GGCC | 6 cut(s) | 245, 572, 692, 889, 950, 1602 |
| BsoBI | CYCGRG | 1 cut(s) | 146 |
| Bsp1286I | GDGCHC | 3 cut(s) | 35, 147, 1064 |
| Bsp13I | TCCGGA | 1 cut(s) | 319 |
| Bsp143I | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 441 |
| BspANI | GGCC | 6 cut(s) | 245, 572, 692, 889, 950, 1602 |
| BspCNI | CTCAG | 7 cut(s) | 343, 400, 411, 433, 523, 1309, 1543 |
| BspEI | TCCGGA | 1 cut(s) | 319 |
| BspFNI | CGCG | 3 cut(s) | 119, 167, 215 |
| BspHI | TCATGA | 1 cut(s) | 1000 |
| BspLI | GGNNCC | 2 cut(s) | 43, 1315 |
| BspMAI | CTGCAG | 1 cut(s) | 1549 |
| BspMI | ACCTGC | 1 cut(s) | 403 |
| BspPI | GGATC | 2 cut(s) | 132, 330 |
| BspQI | GCTCTTC | 1 cut(s) | 540 |
| BsrBI | CCGCTC | 1 cut(s) | 550 |
| BsrDI | GCAATG | 3 cut(s) | 368, 430, 1210 |
| BsrFI | RCCGGY | 2 cut(s) | 877, 1602 |
| BsrI | ACTGG | 4 cut(s) | 43, 1108, 1159, 1533 |
| BssAI | RCCGGY | 2 cut(s) | 877, 1602 |
| BssECI | CCNNGG | 3 cut(s) | 45, 213, 1064 |
| BssMI | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| BssT1I | CCWWGG | 1 cut(s) | 1064 |
| Bst4CI | ACNGT | 7 cut(s) | 21, 373, 863, 1166, 1189, 1197, 1622 |
| Bst6I | CTCTTC | 1 cut(s) | 540 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1544 |
| BstC8I | GCNNGC | 6 cut(s) | 165, 243, 612, 975, 1293, 1604 |
| BstDSI | CCRYGG | 2 cut(s) | 45, 213 |
| BstF5I | GGATG | 4 cut(s) | 135, 1071, 1315, 1540 |
| BstFNI | CGCG | 3 cut(s) | 119, 167, 215 |
| BstH2I | RGCGCY | 2 cut(s) | 164, 207 |
| BstHHI | GCGC | 5 cut(s) | 119, 163, 178, 206, 1618 |
| BstKTI | GATC | 5 cut(s) | 127, 325, 649, 1279, 1321 |
| BstMAI | GTCTC | 1 cut(s) | 273 |
| BstMBI | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| BstMCI | CGRYCG | 1 cut(s) | 23 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 39, 158, 173, 182, 212, 650, 1544, 1553 |
| BstNSI | RCATGY | 1 cut(s) | 932 |
| BstSCI | CCNGG | 2 cut(s) | 274, 294 |
| BstSFI | CTRYAG | 1 cut(s) | 1545 |
| BstSLI | GKGCMC | 1 cut(s) | 1064 |
| BstUI | CGCG | 3 cut(s) | 119, 167, 215 |
| BstV1I | GCAGC | 4 cut(s) | 519, 628, 1531, 1559 |
| BstV2I | GAAGAC | 3 cut(s) | 63, 410, 897 |
| BstX2I | RGATCY | 1 cut(s) | 322 |
| BstYI | RGATCY | 1 cut(s) | 322 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1341, 1356 |
| BsuRI | GGCC | 6 cut(s) | 245, 572, 692, 889, 950, 1602 |
| BtgI | CCRYGG | 2 cut(s) | 45, 213 |
| BtgZI | GCGATG | 1 cut(s) | 200 |
| BtsCI | GGATG | 4 cut(s) | 135, 1071, 1315, 1540 |
| BtsI | GCAGTG | 1 cut(s) | 1613 |
| BtsIMutI | CAGTG | 3 cut(s) | 1171, 1613, 1618 |
| BveI | ACCTGC | 1 cut(s) | 403 |
| Cac8I | GCNNGC | 6 cut(s) | 165, 243, 612, 975, 1293, 1604 |
| CaiI | CAGNNNCTG | 2 cut(s) | 418, 616 |
| CciI | TCATGA | 1 cut(s) | 1000 |
| CfoI | GCGC | 5 cut(s) | 119, 163, 178, 206, 1618 |
| Cfr10I | RCCGGY | 2 cut(s) | 877, 1602 |
| Cfr13I | GGNCC | 4 cut(s) | 243, 337, 1331, 1352 |
| Cfr42I | CCGCGG | 1 cut(s) | 216 |
| CseI | GACGC | 1 cut(s) | 1368 |
| Csp6I | GTAC | 2 cut(s) | 984, 1162 |
| CspAI | ACCGGT | 1 cut(s) | 877 |
| CviAII | CATG | 5 cut(s) | 446, 929, 1001, 1391, 1418 |
| CviQI | GTAC | 2 cut(s) | 984, 1162 |
| DpnI | GATC | 5 cut(s) | 126, 324, 648, 1278, 1320 |
| DpnII | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| DraI | TTTAAA | 1 cut(s) | 672 |
| DraIII | CACNNNGTG | 1 cut(s) | 785 |
| DriI | GACNNNNNGTC | 1 cut(s) | 600 |
| EaeI | YGGCCR | 2 cut(s) | 570, 948 |
| Eam1104I | CTCTTC | 1 cut(s) | 540 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 600 |
| EarI | CTCTTC | 1 cut(s) | 540 |
| EciI | GGCGGA | 4 cut(s) | 137, 170, 535, 1547 |
| Ecl136II | GAGCTC | 2 cut(s) | 33, 145 |
| Eco130I | CCWWGG | 1 cut(s) | 1064 |
| Eco24I | GRGCYC | 2 cut(s) | 35, 147 |
| Eco47I | GGWCC | 3 cut(s) | 337, 1331, 1352 |
| Eco53kI | GAGCTC | 2 cut(s) | 33, 145 |
| Eco57I | CTGAAG | 2 cut(s) | 422, 474 |
| Eco81I | CCTNAGG | 2 cut(s) | 1341, 1356 |
| Eco88I | CYCGRG | 1 cut(s) | 146 |
| EcoICRI | GAGCTC | 2 cut(s) | 33, 145 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1331 |
| EcoT14I | CCWWGG | 1 cut(s) | 1064 |
| EcoT38I | GRGCYC | 2 cut(s) | 35, 147 |
| ErhI | CCWWGG | 1 cut(s) | 1064 |
| FaeI | CATG | 5 cut(s) | 449, 932, 1004, 1394, 1421 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1027, 1059, 1251, 1283 |
| FatI | CATG | 5 cut(s) | 445, 928, 1000, 1390, 1417 |
| FauI | CCCGC | 3 cut(s) | 183, 208, 234 |
| FauNDI | CATATG | 1 cut(s) | 1470 |
| FokI | GGATG | 4 cut(s) | 142, 1058, 1322, 1547 |
| FriOI | GRGCYC | 2 cut(s) | 35, 147 |
| FspBI | CTAG | 3 cut(s) | 834, 1170, 1407 |
| GlaI | GCGC | 5 cut(s) | 118, 162, 177, 205, 1617 |
| HaeII | RGCGCY | 2 cut(s) | 164, 207 |
| HaeIII | GGCC | 6 cut(s) | 245, 572, 692, 889, 950, 1602 |
| HapII | CCGG | 5 cut(s) | 275, 296, 320, 878, 1603 |
| HgaI | GACGC | 1 cut(s) | 1368 |
| HhaI | GCGC | 5 cut(s) | 119, 163, 178, 206, 1618 |
| Hin1II | CATG | 5 cut(s) | 449, 932, 1004, 1394, 1421 |
| Hin6I | GCGC | 5 cut(s) | 117, 161, 176, 204, 1616 |
| HinP1I | GCGC | 5 cut(s) | 117, 161, 176, 204, 1616 |
| HincII | GTYRAC | 2 cut(s) | 301, 630 |
| HindII | GTYRAC | 2 cut(s) | 301, 630 |
| HindIII | AAGCTT | 1 cut(s) | 1242 |
| HinfI | GANTC | 8 cut(s) | 209, 255, 266, 581, 992, 1098, 1433, 1591 |
| HpaI | GTTAAC | 1 cut(s) | 630 |
| HpaII | CCGG | 5 cut(s) | 275, 296, 320, 878, 1603 |
| HphI | GGTGA | 3 cut(s) | 145, 766, 822 |
| Hpy166II | GTNNAC | 4 cut(s) | 301, 630, 866, 1502 |
| Hpy188I | TCNGA | 7 cut(s) | 13, 129, 420, 606, 744, 945, 1438 |
| Hpy188III | TCNNGA | 5 cut(s) | 259, 320, 1001, 1182, 1307 |
| Hpy8I | GTNNAC | 4 cut(s) | 301, 630, 866, 1502 |
| Hpy99I | CGWCG | 6 cut(s) | 21, 64, 67, 70, 91, 606 |
| HpyAV | CCTTC | 5 cut(s) | 130, 430, 535, 834, 900 |
| HpyCH4III | ACNGT | 7 cut(s) | 21, 373, 863, 1166, 1189, 1197, 1622 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 39, 158, 173, 182, 212, 650, 1544, 1553 |
| Hsp92II | CATG | 5 cut(s) | 449, 932, 1004, 1394, 1421 |
| HspAI | GCGC | 5 cut(s) | 117, 161, 176, 204, 1616 |
| Kpn2I | TCCGGA | 1 cut(s) | 319 |
| KroI | GCCGGC | 1 cut(s) | 1602 |
| KroNI | GCCGGC | 1 cut(s) | 1604 |
| KspAI | GTTAAC | 1 cut(s) | 630 |
| KspI | CCGCGG | 1 cut(s) | 216 |
| Kzo9I | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| LguI | GCTCTTC | 1 cut(s) | 540 |
| LmnI | GCTCC | 3 cut(s) | 47, 142, 1313 |
| Lsp1109I | GCAGC | 4 cut(s) | 519, 628, 1531, 1559 |
| LweI | GCATC | 5 cut(s) | 177, 439, 801, 1412, 1525 |
| MaeI | CTAG | 3 cut(s) | 834, 1170, 1407 |
| MaeIII | GTNAC | 4 cut(s) | 346, 388, 457, 488 |
| MalI | GATC | 5 cut(s) | 126, 324, 648, 1278, 1320 |
| MbiI | CCGCTC | 1 cut(s) | 550 |
| MboI | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| MfeI | CAATTG | 1 cut(s) | 1539 |
| MflI | RGATCY | 1 cut(s) | 322 |
| MhlI | GDGCHC | 3 cut(s) | 35, 147, 1064 |
| MlsI | TGGCCA | 2 cut(s) | 572, 950 |
| MluCI | AATT | 8 cut(s) | 220, 474, 523, 597, 667, 838, 910, 1539 |
| MluNI | TGGCCA | 2 cut(s) | 572, 950 |
| MlyI | GAGTC | 5 cut(s) | 264, 275, 590, 1092, 1442 |
| MmeI | TCCRAC | 2 cut(s) | 584, 1126 |
| Mox20I | TGGCCA | 2 cut(s) | 572, 950 |
| MroI | TCCGGA | 1 cut(s) | 319 |
| MroNI | GCCGGC | 1 cut(s) | 1602 |
| MscI | TGGCCA | 2 cut(s) | 572, 950 |
| MseI | TTAA | 9 cut(s) | 467, 527, 629, 671, 695, 858, 1152, 1232, 1281 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1422 |
| Msp20I | TGGCCA | 2 cut(s) | 572, 950 |
| MspA1I | CMGCKG | 4 cut(s) | 215, 989, 1454, 1550 |
| MspI | CCGG | 5 cut(s) | 275, 296, 320, 878, 1603 |
| MspR9I | CCNGG | 2 cut(s) | 276, 296 |
| MunI | CAATTG | 1 cut(s) | 1539 |
| MvnI | CGCG | 3 cut(s) | 119, 167, 215 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 39, 158, 173, 182, 212, 650, 1544, 1553 |
| NaeI | GCCGGC | 1 cut(s) | 1604 |
| NciI | CCSGG | 2 cut(s) | 276, 296 |
| NdeI | CATATG | 1 cut(s) | 1470 |
| NdeII | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| NgoMIV | GCCGGC | 1 cut(s) | 1602 |
| NlaIII | CATG | 5 cut(s) | 449, 932, 1004, 1394, 1421 |
| NlaIV | GGNNCC | 2 cut(s) | 43, 1315 |
| NspI | RCATGY | 1 cut(s) | 932 |
| PaeR7I | CTCGAG | 1 cut(s) | 146 |
| PagI | TCATGA | 1 cut(s) | 1000 |
| PciI | ACATGT | 1 cut(s) | 928 |
| PciSI | GCTCTTC | 1 cut(s) | 540 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 65, 71 |
| PdiI | GCCGGC | 1 cut(s) | 1604 |
| PfeI | GAWTC | 3 cut(s) | 209, 992, 1591 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 980 |
| PinAI | ACCGGT | 1 cut(s) | 877 |
| PleI | GAGTC | 5 cut(s) | 263, 274, 589, 1092, 1441 |
| PpsI | GAGTC | 5 cut(s) | 263, 274, 589, 1092, 1441 |
| PpuMI | RGGWCCY | 1 cut(s) | 1331 |
| PscI | ACATGT | 1 cut(s) | 928 |
| Psp124BI | GAGCTC | 2 cut(s) | 35, 147 |
| Psp5II | RGGWCCY | 1 cut(s) | 1331 |
| PspN4I | GGNNCC | 2 cut(s) | 43, 1315 |
| PspPI | GGNCC | 4 cut(s) | 243, 337, 1331, 1352 |
| PspPPI | RGGWCCY | 1 cut(s) | 1331 |
| PspXI | VCTCGAGB | 1 cut(s) | 146 |
| PstI | CTGCAG | 1 cut(s) | 1549 |
| PstNI | CAGNNNCTG | 2 cut(s) | 418, 616 |
| PsuI | RGATCY | 1 cut(s) | 322 |
| PvuII | CAGCTG | 3 cut(s) | 989, 1454, 1550 |
| RsaI | GTAC | 2 cut(s) | 985, 1163 |
| RsaNI | GTAC | 2 cut(s) | 984, 1162 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1422 |
| SacI | GAGCTC | 2 cut(s) | 35, 147 |
| SacII | CCGCGG | 1 cut(s) | 216 |
| SapI | GCTCTTC | 1 cut(s) | 540 |
| SaqAI | TTAA | 9 cut(s) | 467, 527, 629, 671, 695, 858, 1152, 1232, 1281 |
| Sau3AI | GATC | 5 cut(s) | 124, 322, 646, 1276, 1318 |
| Sau96I | GGNCC | 4 cut(s) | 243, 337, 1331, 1352 |
| SchI | GAGTC | 5 cut(s) | 264, 275, 590, 1092, 1442 |
| ScrFI | CCNGG | 2 cut(s) | 276, 296 |
| SduI | GDGCHC | 3 cut(s) | 35, 147, 1064 |
| SfaNI | GCATC | 5 cut(s) | 177, 439, 801, 1412, 1525 |
| SfcI | CTRYAG | 1 cut(s) | 1545 |
| Sfr274I | CTCGAG | 1 cut(s) | 146 |
| Sfr303I | CCGCGG | 1 cut(s) | 216 |
| SgrBI | CCGCGG | 1 cut(s) | 216 |
| SinI | GGWCC | 3 cut(s) | 337, 1331, 1352 |
| SlaI | CTCGAG | 1 cut(s) | 146 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1422 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| Sse9I | AATT | 8 cut(s) | 220, 474, 523, 597, 667, 838, 910, 1539 |
| SspI | AATATT | 1 cut(s) | 567 |
| SspMI | CTAG | 3 cut(s) | 834, 1170, 1407 |
| SstI | GAGCTC | 2 cut(s) | 35, 147 |
| StyD4I | CCNGG | 2 cut(s) | 274, 294 |
| StyI | CCWWGG | 1 cut(s) | 1064 |
| TaaI | ACNGT | 7 cut(s) | 21, 373, 863, 1166, 1189, 1197, 1622 |
| TaqI | TCGA | 4 cut(s) | 29, 35, 147, 1253 |
| TasI | AATT | 8 cut(s) | 220, 474, 523, 597, 667, 838, 910, 1539 |
| TatI | WGTACW | 1 cut(s) | 1161 |
| TauI | GCSGC | 7 cut(s) | 53, 56, 117, 122, 155, 204, 361 |
| TfiI | GAWTC | 3 cut(s) | 209, 992, 1591 |
| Tru1I | TTAA | 9 cut(s) | 467, 527, 629, 671, 695, 858, 1152, 1232, 1281 |
| Tru9I | TTAA | 9 cut(s) | 467, 527, 629, 671, 695, 858, 1152, 1232, 1281 |
| TscAI | CASTG | 3 cut(s) | 1171, 1613, 1625 |
| TseI | GCWGC | 4 cut(s) | 507, 641, 1544, 1547 |
| TspDTI | ATGAA | 7 cut(s) | 678, 1017, 1060, 1164, 1299, 1407, 1457 |
| TspGWI | ACGGA | 3 cut(s) | 407, 904, 1047 |
| TspRI | CASTG | 3 cut(s) | 1171, 1613, 1625 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 980 |
| VpaK11BI | GGWCC | 3 cut(s) | 337, 1331, 1352 |
| XapI | RAATTY | 3 cut(s) | 523, 667, 910 |
| XceI | RCATGY | 1 cut(s) | 932 |
| XhoI | CTCGAG | 1 cut(s) | 146 |
| XspI | CTAG | 3 cut(s) | 834, 1170, 1407 |