AT1G26810

Galectin

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
9286643 .. 9290096
3454 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26810.2

Sequence Viewer

Length: 1932 bp
ATGAAGAGATTTTATGGAGGGCTTCTTGTTGTATCAATGTGTATGTTCTTGACGGTGTATAGATATGTAGACTTGAACACTCCTGTTGAAAAGCCTTATATTACTGCTGCTGCTTCTGTTGTTGTTACTCCTAACACCACTCTTCCTATGGAATGGCTGCGGATTACTCTCCCTGACTTTATGAAAGAAGCGAGGAATACTCAAGAAGCGATATCTGGTGATGATATCGCTGTTGTCTCGGGTTTGTTTGTTGAGCAGAATGTGTCTAAAGAAGAGAGAGAGCCTTTGCTTACTTGGAACCGTTTGGAAAGTCTTGTTGATAATGCACAGAGTTTAGTTAATGGAGTTGATGCTATTAAGGAAGCTGGCATTGTTTGGGAGAGTCTTGTGTCTGCTGTTGAAGCTAAGAAACTAGTTGATGTTAATGAAAATCAGACGAGGAAAGGAAAAGAGGAGCTTTGTCCTCAGTTTCTAAGCAAAATGAATGCTACTGAAGCTGATGGGAGTAGTCTGAAGTTGCAAATTCCTTGTGGTTTGACTCAGGGTTCCTCCATCACAGTTATTGGCATCCCAGATGGTCTTGTTGGTAGTTTTCGGATTGATCTAACGGGACAACCGCTTCCAGGGGAGCCTGATCCACCCATCATTGTGCATTATAATGTTAGGCTTCTTGGTGACAAATCGACGGAAGACCCTGTGATTGTTCAAAACAGCTGGACGGCATCTCAGGACTGGGGAGCTGAGGAACGCTGTCCAAAATTTGATCCTGATATGAATAAGAAAGTGGATGACTTGGATGAATGCAACAAGATGGTTGGTGGAGAAATTAACCGAACTTCTTCAACTAGCTTGCAGTCCAACACTTCAAGGGGAGTTCCAGTAGCCAGGGAAGCATCTAAACATGAAAAATACTTTCCTTTCAAGCAGGGTTTCTTATCGGTTGCTACACTTAGGGTGGGAACAGAGGGAATGCAGATGACAGTTGATGGGAAACATATAACTTCATTTGCTTTCCGCGATACACTGGAACCGTGGCTTGTTAGTGAAATACGGATTACAGGTGACTTTAGGTTAATATCCATTCTTGCCAGCGGTTTGCCCACATCAGAAGAATCAGAGCACGTTGTTGATCTAGAGGCACTAAAATCACCTACCCTTTCACCATTAAGGCCACTGGATCTCGTTATTGGTGTTTTCTCCACTGCAAACAATTTTAAAAGACGGATGGCTGTGAGGAGAACATGGATGCAGTATGATGATGTAAGATCTGGAAGAGTTGCAGTACGCTTTTTTGTTGGCCTTCACAAAAGTCCTCTTGTTAACTTGGAACTCTGGAACGAGGCTCGGACTTACGGTGATGTTCAGCTAATGCCCTTTGTTGATTATTACAGTCTCATCAGTTGGAAAACACTAGCCATCTGCATCTTCGGGACAGAGGTTGACTCAGCCAAGTTCATCATGAAAACGGATGATGACGCCTTTGTTCGTGTAGATGAAGTGTTACTTTCTTTATCAATGACCAACAACACTCGCGGGTTAATATACGGACTGATCAATTCCGACTCTCAACCTATTCGAAACCCTGATAGCAAATGGTACATCAGTTATGAGGAATGGCCTGAAGAGAAATATCCACCATGGGCGCATGGTCCAGGCTACATTGTATCTCGTGACATAGCAGAATCGGTTGGTAAGCTTTTCAAAGAAGGAAACCTAAAGATGTTTAAGCTAGAAGATGTGGCAATGGGGATATGGATAGCTGAGCTGACAAAACATGGACTCGAGCCTCATTACGAAAACGATGGAAGGATCATTAGTGATGGATGCAAGGATGGTTATGTGGTTGCTCATTACCAAAGCCCTGCCGAAATGACTTGCCTTTGGCGTAAATACCAAGAAACCAAACGCTCTCTTTGCTGCCGCGAATGGTAA

Protein Analysis

643

Amino Acids

72.32

Weight (kDa)

5.18

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gal-bind_lectin PF00337 172 - 361 3.9e-28 Galactoside-binding lectin
Galactosyl_T PF01762 406 - 589 6.3e-38 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 657
AccI GTMKAC 1 cut(s) 69
AccII CGCG 3 cut(s) 1017, 1533, 1923
AciI CCGC 6 cut(s) 160, 617, 1015, 1092, 1533, 1921
AclWI GGATC 4 cut(s) 629, 758, 1185, 1817
AcsI RAATTY 2 cut(s) 522, 758
AcuI CTGAAG 3 cut(s) 513, 533, 1641
AcyI GRCGYC 1 cut(s) 1476
AfaI GTAC 2 cut(s) 1284, 1598
AfiI CCNNNNNNNGG 1 cut(s) 623
AgsI TTSAA 8 cut(s) 76, 89, 401, 707, 843, 867, 922, 1702
AhlI ACTAGT 1 cut(s) 412
AjnI CCWGG 3 cut(s) 622, 884, 1651
Alw21I GWGCWC 1 cut(s) 1122
Alw26I GTCTC 2 cut(s) 241, 1397
AlwI GGATC 4 cut(s) 629, 758, 1185, 1817
Ama87I CYCGRG 2 cut(s) 238, 1781
AoxI GGCC 3 cut(s) 1169, 1297, 1616
ApeKI GCWGC 4 cut(s) 107, 110, 157, 1917
ApoI RAATTY 2 cut(s) 522, 758
Asp700I GAANNNNTTC 1 cut(s) 838
AspLEI GCGC 1 cut(s) 1645
AspS9I GGNCC 1 cut(s) 1649
AsuHPI GGTGA 6 cut(s) 230, 686, 1073, 1140, 1152, 1367
AsuII TTCGAA 1 cut(s) 1576
AvaI CYCGRG 2 cut(s) 238, 1781
AvaII GGWCC 1 cut(s) 1649
BaeI ACNNNNGTAYC 2 cut(s) 1588, 1621
BauI CACGAG 1 cut(s) 1668
BbsI GAAGAC 1 cut(s) 696
Bbv12I GWGCWC 1 cut(s) 1122
BbvCI CCTCAGC 1 cut(s) 741
BbvI GCAGC 4 cut(s) 94, 97, 144, 1904
BceAI ACGGC 1 cut(s) 735
BciT130I CCWGG 3 cut(s) 624, 886, 1653
BclI TGATCA 1 cut(s) 1551
BcoDI GTCTC 2 cut(s) 241, 1397
BcuI ACTAGT 1 cut(s) 412
BfaI CTAG 5 cut(s) 413, 846, 1133, 1412, 1730
BglII AGATCT 1 cut(s) 1265
BisI GCNGC 5 cut(s) 108, 111, 158, 1918, 1921
BlpI GCTNAGC 1 cut(s) 1761
BlsI GCNGC 5 cut(s) 109, 112, 159, 1919, 1922
Bme1390I CCNGG 3 cut(s) 624, 886, 1653
Bme18I GGWCC 1 cut(s) 1649
BmeT110I CYCGRG 2 cut(s) 238, 1781
BmgT120I GGNCC 1 cut(s) 1649
BmiI GGNNCC 4 cut(s) 299, 547, 630, 1029
BmrFI CCNGG 3 cut(s) 624, 886, 1653
BmrI ACTGGG 1 cut(s) 742
BmsI GCATC 7 cut(s) 340, 576, 731, 902, 1236, 1431, 1814
BmuI ACTGGG 1 cut(s) 742
BpiI GAAGAC 1 cut(s) 696
BplI GAGNNNNNCTC 4 cut(s) 184, 216, 1427, 1459
Bpu10I CCTNAGC 1 cut(s) 741
Bpu1102I GCTNAGC 1 cut(s) 1761
Bpu14I TTCGAA 1 cut(s) 1576
BpuEI CTTGAG 1 cut(s) 186
BsaHI GRCGYC 1 cut(s) 1476
BsaJI CCNNGG 4 cut(s) 623, 885, 1031, 1637
BsaXI ACNNNNNCTCC 2 cut(s) 864, 894
Bsc4I CCNNNNNNNGG 1 cut(s) 623
Bse1I ACTGG 4 cut(s) 737, 878, 1029, 1179
Bse3DI GCAATG 1 cut(s) 1749
BseBI CCWGG 3 cut(s) 624, 886, 1653
BseDI CCNNGG 4 cut(s) 623, 885, 1031, 1637
BseGI GGATG 8 cut(s) 567, 793, 802, 1230, 1251, 1474, 1829, 1837
BseLI CCNNNNNNNGG 1 cut(s) 623
BseMI GCAATG 1 cut(s) 1749
BseMII CTCAG 6 cut(s) 479, 554, 732, 740, 1458, 1752
BseNI ACTGG 4 cut(s) 737, 878, 1029, 1179
BseRI GAGGAG 2 cut(s) 467, 1249
BseXI GCAGC 4 cut(s) 94, 97, 144, 1904
Bsh1236I CGCG 3 cut(s) 1017, 1533, 1923
BshFI GGCC 3 cut(s) 1171, 1299, 1618
BsiHKAI GWGCWC 1 cut(s) 1122
BsiHKCI CYCGRG 2 cut(s) 238, 1781
BslFI GGGAC 2 cut(s) 624, 1444
BslI CCNNNNNNNGG 1 cut(s) 623
BsmAI GTCTC 2 cut(s) 241, 1397
BsmFI GGGAC 2 cut(s) 624, 1444
BsmI GAATGC 3 cut(s) 490, 806, 975
BsnI GGCC 3 cut(s) 1171, 1299, 1618
BsoBI CYCGRG 2 cut(s) 238, 1781
Bsp119I TTCGAA 1 cut(s) 1576
Bsp1286I GDGCHC 1 cut(s) 1122
Bsp143I GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
Bsp1720I GCTNAGC 1 cut(s) 1761
Bsp19I CCATGG 1 cut(s) 1637
BspACI CCGC 6 cut(s) 160, 617, 1015, 1092, 1533, 1921
BspANI GGCC 3 cut(s) 1171, 1299, 1618
BspCNI CTCAG 6 cut(s) 478, 553, 733, 739, 1457, 1753
BspFNI CGCG 3 cut(s) 1017, 1533, 1923
BspHI TCATGA 1 cut(s) 1458
BspLI GGNNCC 4 cut(s) 299, 547, 630, 1029
BspPI GGATC 4 cut(s) 629, 758, 1185, 1817
BspT104I TTCGAA 1 cut(s) 1576
BsrDI GCAATG 1 cut(s) 1749
BsrI ACTGG 4 cut(s) 737, 878, 1029, 1179
BssECI CCNNGG 4 cut(s) 623, 885, 1031, 1637
BssMI GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
BssNI GRCGYC 1 cut(s) 1476
BssSI CACGAG 1 cut(s) 1668
BssT1I CCWWGG 1 cut(s) 1637
Bst2BI CACGAG 1 cut(s) 1668
Bst2UI CCWGG 3 cut(s) 624, 886, 1653
Bst4CI ACNGT 7 cut(s) 55, 302, 559, 982, 1032, 1355, 1391
Bst6I CTCTTC 4 cut(s) 147, 267, 1267, 1617
BstACI GRCGYC 1 cut(s) 1476
BstBI TTCGAA 1 cut(s) 1576
BstC8I GCNNGC 3 cut(s) 367, 851, 1090
BstDEI CTNAG 9 cut(s) 405, 465, 473, 540, 726, 741, 950, 1444, 1761
BstDSI CCRYGG 2 cut(s) 1031, 1637
BstF5I GGATG 8 cut(s) 567, 793, 802, 1230, 1251, 1474, 1829, 1837
BstFNI CGCG 3 cut(s) 1017, 1533, 1923
BstHHI GCGC 1 cut(s) 1645
BstKTI GATC 8 cut(s) 604, 637, 766, 1132, 1180, 1268, 1554, 1812
BstMAI GTCTC 2 cut(s) 241, 1397
BstMBI GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
BstMWI GCNNNNNNNGC 4 cut(s) 401, 494, 890, 1914
BstNI CCWGG 3 cut(s) 624, 886, 1653
BstSCI CCNGG 3 cut(s) 622, 884, 1651
BstUI CGCG 3 cut(s) 1017, 1533, 1923
BstV1I GCAGC 4 cut(s) 94, 97, 144, 1904
BstV2I GAAGAC 1 cut(s) 696
BstX2I RGATCY 2 cut(s) 1177, 1265
BstYI RGATCY 2 cut(s) 1177, 1265
BsuRI GGCC 3 cut(s) 1171, 1299, 1618
BtgI CCRYGG 2 cut(s) 1031, 1637
BtsCI GGATG 8 cut(s) 567, 793, 802, 1230, 1251, 1474, 1829, 1837
BtsI GCAGTG 1 cut(s) 1200
BtsIMutI CAGTG 3 cut(s) 1022, 1172, 1200
Cac8I GCNNGC 3 cut(s) 367, 851, 1090
CciI TCATGA 1 cut(s) 1458
CfoI GCGC 1 cut(s) 1645
Cfr13I GGNCC 1 cut(s) 1649
CseI GACGC 1 cut(s) 1484
Csp6I GTAC 2 cut(s) 1283, 1597
CviAII CATG 6 cut(s) 902, 1242, 1459, 1638, 1646, 1775
CviQI GTAC 2 cut(s) 1283, 1597
DdeI CTNAG 9 cut(s) 405, 465, 473, 540, 726, 741, 950, 1444, 1761
DpnI GATC 8 cut(s) 603, 636, 765, 1131, 1179, 1267, 1553, 1811
DpnII GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
DraI TTTAAA 1 cut(s) 1216
Eam1104I CTCTTC 4 cut(s) 147, 267, 1267, 1617
EarI CTCTTC 4 cut(s) 147, 267, 1267, 1617
Eco130I CCWWGG 1 cut(s) 1637
Eco32I GATATC 2 cut(s) 213, 226
Eco47I GGWCC 1 cut(s) 1649
Eco57I CTGAAG 3 cut(s) 513, 533, 1641
Eco88I CYCGRG 2 cut(s) 238, 1781
EcoRII CCWGG 3 cut(s) 622, 884, 1651
EcoRV GATATC 2 cut(s) 213, 226
EcoT14I CCWWGG 1 cut(s) 1637
ErhI CCWWGG 1 cut(s) 1637
FaeI CATG 6 cut(s) 905, 1245, 1462, 1641, 1649, 1778
FalI AAGNNNNNCTT 4 cut(s) 441, 473, 1488, 1520
FaqI GGGAC 2 cut(s) 624, 1444
FatI CATG 6 cut(s) 901, 1241, 1458, 1637, 1645, 1774
FauI CCCGC 1 cut(s) 1526
FbaI TGATCA 1 cut(s) 1551
FblI GTMKAC 1 cut(s) 69
Fnu4HI GCNGC 5 cut(s) 108, 111, 158, 1918, 1921
FokI GGATG 8 cut(s) 554, 800, 809, 1237, 1258, 1481, 1836, 1844
Fsp4HI GCNGC 5 cut(s) 108, 111, 158, 1918, 1921
FspBI CTAG 5 cut(s) 413, 846, 1133, 1412, 1730
GlaI GCGC 1 cut(s) 1644
GluI GCNGC 5 cut(s) 108, 111, 158, 1918, 1921
HaeIII GGCC 3 cut(s) 1171, 1299, 1618
HgaI GACGC 1 cut(s) 1484
HhaI GCGC 1 cut(s) 1645
Hin1I GRCGYC 1 cut(s) 1476
Hin1II CATG 6 cut(s) 905, 1245, 1462, 1641, 1649, 1778
Hin6I GCGC 1 cut(s) 1643
HinP1I GCGC 1 cut(s) 1643
HincII GTYRAC 2 cut(s) 1321, 1441
HindII GTYRAC 2 cut(s) 1321, 1441
HindIII AAGCTT 1 cut(s) 1694
HinfI GANTC 7 cut(s) 382, 538, 1112, 1442, 1562, 1682, 1779
HpaI GTTAAC 1 cut(s) 1321
HphI GGTGA 6 cut(s) 230, 686, 1073, 1140, 1152, 1367
Hpy166II GTNNAC 3 cut(s) 70, 1321, 1441
Hpy188I TCNGA 7 cut(s) 435, 513, 597, 1108, 1117, 1347, 1561
Hpy8I GTNNAC 3 cut(s) 70, 1321, 1441
Hpy99I CGWCG 1 cut(s) 688
HpyAV CCTTC 3 cut(s) 1310, 1700, 1800
HpyCH4III ACNGT 7 cut(s) 55, 302, 559, 982, 1032, 1355, 1391
HpyCH4IV ACGT 1 cut(s) 1122
HpyF10VI GCNNNNNNNGC 4 cut(s) 401, 494, 890, 1914
HpyF3I CTNAG 9 cut(s) 405, 465, 473, 540, 726, 741, 950, 1444, 1761
HpySE526I ACGT 1 cut(s) 1122
Hsp92I GRCGYC 1 cut(s) 1476
Hsp92II CATG 6 cut(s) 905, 1245, 1462, 1641, 1649, 1778
HspAI GCGC 1 cut(s) 1643
Ksp22I TGATCA 1 cut(s) 1551
KspAI GTTAAC 1 cut(s) 1321
Kzo9I GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
LmnI GCTCC 3 cut(s) 454, 628, 737
Lsp1109I GCAGC 4 cut(s) 94, 97, 144, 1904
LweI GCATC 7 cut(s) 340, 576, 731, 902, 1236, 1431, 1814
MaeI CTAG 5 cut(s) 413, 846, 1133, 1412, 1730
MaeII ACGT 1 cut(s) 1122
MaeIII GTNAC 5 cut(s) 124, 674, 1061, 1500, 1670
MalI GATC 8 cut(s) 603, 636, 765, 1131, 1179, 1267, 1553, 1811
MboI GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
MflI RGATCY 2 cut(s) 1177, 1265
MhlI GDGCHC 1 cut(s) 1122
MluCI AATT 5 cut(s) 522, 758, 825, 1210, 1555
MlyI GAGTC 5 cut(s) 391, 532, 1436, 1556, 1773
MmeI TCCRAC 3 cut(s) 882, 1382, 1584
MroXI GAANNNNTTC 1 cut(s) 838
MslI CAYNNNNRTG 2 cut(s) 647, 657
MspA1I CMGCKG 2 cut(s) 714, 1092
MspR9I CCNGG 3 cut(s) 624, 886, 1653
Mva1269I GAATGC 3 cut(s) 490, 806, 975
MvaI CCWGG 3 cut(s) 624, 886, 1653
MvnI CGCG 3 cut(s) 1017, 1533, 1923
MwoI GCNNNNNNNGC 4 cut(s) 401, 494, 890, 1914
NcoI CCATGG 1 cut(s) 1637
NdeII GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
NlaIII CATG 6 cut(s) 905, 1245, 1462, 1641, 1649, 1778
NlaIV GGNNCC 4 cut(s) 299, 547, 630, 1029
NmuCI GTSAC 3 cut(s) 674, 1061, 1670
NspV TTCGAA 1 cut(s) 1576
PaeR7I CTCGAG 1 cut(s) 1781
PagI TCATGA 1 cut(s) 1458
PctI GAATGC 3 cut(s) 490, 806, 975
PdmI GAANNNNTTC 1 cut(s) 838
PfeI GAWTC 2 cut(s) 1112, 1682
PkrI GCNGC 5 cut(s) 109, 112, 159, 1919, 1922
PleI GAGTC 5 cut(s) 390, 532, 1436, 1556, 1773
PpsI GAGTC 5 cut(s) 390, 532, 1436, 1556, 1773
PsiI TTATAA 1 cut(s) 657
Psp6I CCWGG 3 cut(s) 622, 884, 1651
PspGI CCWGG 3 cut(s) 622, 884, 1651
PspN4I GGNNCC 4 cut(s) 299, 547, 630, 1029
PspPI GGNCC 1 cut(s) 1649
PspXI VCTCGAGB 1 cut(s) 1781
PsuI RGATCY 2 cut(s) 1177, 1265
PvuII CAGCTG 1 cut(s) 714
RsaI GTAC 2 cut(s) 1284, 1598
RsaNI GTAC 2 cut(s) 1283, 1597
RseI CAYNNNNRTG 2 cut(s) 647, 657
SatI GCNGC 5 cut(s) 108, 111, 158, 1918, 1921
Sau3AI GATC 8 cut(s) 601, 634, 763, 1129, 1177, 1265, 1551, 1809
Sau96I GGNCC 1 cut(s) 1649
SchI GAGTC 5 cut(s) 391, 532, 1436, 1556, 1773
ScrFI CCNGG 3 cut(s) 624, 886, 1653
SduI GDGCHC 1 cut(s) 1122
SfaNI GCATC 7 cut(s) 340, 576, 731, 902, 1236, 1431, 1814
Sfr274I CTCGAG 1 cut(s) 1781
SfuI TTCGAA 1 cut(s) 1576
SinI GGWCC 1 cut(s) 1649
SlaI CTCGAG 1 cut(s) 1781
SmiMI CAYNNNNRTG 2 cut(s) 647, 657
SmlI CTYRAG 2 cut(s) 201, 1781
SmoI CTYRAG 2 cut(s) 201, 1781
SpeI ACTAGT 1 cut(s) 412
Sse9I AATT 5 cut(s) 522, 758, 825, 1210, 1555
SsiI CCGC 6 cut(s) 160, 617, 1015, 1092, 1533, 1921
SspMI CTAG 5 cut(s) 413, 846, 1133, 1412, 1730
StyD4I CCNGG 3 cut(s) 622, 884, 1651
StyI CCWWGG 1 cut(s) 1637
TaaI ACNGT 7 cut(s) 55, 302, 559, 982, 1032, 1355, 1391
TaiI ACGT 1 cut(s) 1125
TaqI TCGA 3 cut(s) 683, 1576, 1782
TasI AATT 5 cut(s) 522, 758, 825, 1210, 1555
TauI GCSGC 1 cut(s) 1923
TfiI GAWTC 2 cut(s) 1112, 1682
TscAI CASTG 3 cut(s) 1029, 1179, 1207
TseFI GTSAC 3 cut(s) 674, 1061, 1670
TseI GCWGC 4 cut(s) 107, 110, 157, 1917
Tsp45I GTSAC 3 cut(s) 674, 1061, 1670
TspGWI ACGGA 5 cut(s) 701, 1066, 1237, 1481, 1560
TspRI CASTG 3 cut(s) 1029, 1179, 1207
VpaK11BI GGWCC 1 cut(s) 1649
XapI RAATTY 2 cut(s) 522, 758
XbaI TCTAGA 1 cut(s) 1132
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XhoI CTCGAG 1 cut(s) 1781
XmiI GTMKAC 1 cut(s) 69
XmnI GAANNNNTTC 1 cut(s) 838
XspI CTAG 5 cut(s) 413, 846, 1133, 1412, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.