Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0006774

Physical Location & Seq

Genomic Coordinates Reverse (-)

53879175 .. 53884703

Gene Structure 5529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG383900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGACGATCAATAAGTTGGAGATTCCGGCTCAGAGCTTTTCCTGTAATTTTGAGATCACCAGAATGAAGAAATCCTACGGTGGTATTGTGGCTGCATCCTTATTCATGCTGCTAGTCCTCAGATATGCCATCACGAACTATCCCATTGGTGATAGTTACTTGACCAATGTATTGTACTCCAATTCTACTAATCCTGTTGGTATTAATCCTCTTGAATGGTTGAATACTGCTCCACCTGCAGTTCAGAGTCCAGAGAATGTTTCTCAAGTGGTTTCTGCTGAGAAAATAGTCTCTAGTCTCTTTGCTCATAGAAATCTATCCAATGAAGAGCAGCAAACTTTGAACACATGGAAACTTCTGAAGAATCTTATCAACCAAGGTCAGGGTTTGCCTAATGCTGTCGATGCTATAAAGGAAGCTGGAGGTGCATGGAATAGCCTTATGGATTCAGTTGAAGAGCAAAGACTTGGTTATACTAATGAAAGTTCACCAGGGAGAACGAAGCAGTGTCCGCATTTTCTTAGTAAAATGAATGGGACAGAAATCGATAATAGTGGTTACAAGTTGCGGGTTCCTTGTGGCCTCACTCAAGGTTCGTCAATTACGGTCATCGGTATCCCAAACGGAATTCTTGGCAGTTTCCGGATCGATTTGACAGGGGAGCCCCTTCCAGGGGAACCTGAACCACCCATTATATTGCATTACAATGTTAGGCTAAGCGGTGATAAGCTAACTGAGGACCCTGTAATTGTCCAAAACAGCTGGACTATTGCTCATGATTGGGGTGATGAGGAGCGCTGCCCGTCTCCCACTCCTGAAAAGAACAAGAAAGTTGATGAGTTGGACAACTGCAACAAGATAGTTGGAAAAACAGGAGAGCAGAGAATACGTTCCAATGTCTCAAGGCAGTCTCCATTACAAGATGGATCAAAGCCCAGAAAATACTTCCCTTTTAAGCAAGGCTATCCATTTGTTGCTACACTTAGAGTGGGCTCAGAAGGAATTCAAATGACAGTTGATGGGAAGCATATAACATCCTTTGCGGTCCGCGAAACTTTGGAGCCATGGCTTGTCAGCGAAGTAAGGATATCTGGTGACTTGCAATTAATTTCTGTCCTGGCCAGTGGATTACCCACATCAGAGGATTCGGAGCACATTGTTAATTTAGAAGAACTCAAATCTGCTCCGCTTTCTCTTCACAAACAATTGGATCTCTTCATTGGTGTTTTCTCTACCGCAAACAATTTTAAACGAAGGATGGCTGTTCGAAGAACATGGATGCAGTATGCTCCAGTGAAATCAGGGGCAGCTTCAGTGCGCTTTTTCGTTGGTCTGCATAAGAACCAGATAGTGAATGAGGAACTCTGGAATGAGGCACAGACCTATGGGGACATTCAATTGATGCCTTTTGTTGATTACTACGGCCTTATCACATGGAAAACTTTGGCCATCTGTATCTATGGGACAGAAGTTGTTTCAGCAAAGTTTGTCATGAAGACCGATGACGATGCATTTGTCCGTGTGGATGAAGTGCTAGCTTCCTTAAACAGGATCAAGGTGACTAGTGGCTTGCTTTATGGACTCATTAACTCAGATTCCCAACCTCATCGAAATCCAGACAGCAAGTGGTATATCAGCCCTGAGGTAATTTGCTATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0009058 GO:0009059 GO:0009987 GO:0010488 GO:0010493 GO:0012505 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0033692 GO:0034637 GO:0034645 GO:0035250 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901135 GO:1901137 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00513 ko01100 map00513 map01100

Pfam Domains

Protein Families

Gal-bind_lectin Galactosyl_T

Protein Analysis

553

Amino Acids

61.55

Weight (kDa)

6.07

Isoelectric Point (pI)

42.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal-bind_lectin	PF00337	187 - 373	1.4e-28	Galactoside-binding lectin
Galactosyl_T	PF01762	417 - 548	8.9e-24	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006774)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26810 AT1G26810
fragaria_vesca	FvH4_4g31270 FvH4_4g31270 FvH4_4g31270 FvH4_4g31270
malus_domestica	MD13G1071300.v1.1 MD16G1072100.v1.1
prunus_persica	Prupe.1G275500_v2.0.a1 Prupe.1G275500_v2.0.a1 Prupe.1G275500_v2.0.a1 Prupe.1G275500_v2.0.a1
pyrus_communis	pycom13g06400 pycom16g06250
rosa_chinensis	RchiOBHm_Chr4g0439721
rosa_laevigata	RLG00000006242
rosa_multiflora	Rmu_co8406519.1_g000001 Rmu_sc0023161.1_g000002 Rmu_ssc0000029.1_g000012
rosa_roxburghii	Rroxscaffold_5G00380660
rosa_rugosa	Rorug04G0321000
rosa_samantha	Rh4AG372000 Rh4BG383900 Rh4CG398600 Rh4DG378500
rosa_wichuraiana	Rw4G031750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	244
Acc36I	ACCTGC	1 cut(s)	244
AccII	CGCG	1 cut(s)	1050
AccIII	TCCGGA	1 cut(s)	642
AciI	CCGC	7 cut(s)	512, 568, 720, 1043, 1048, 1187, 1236
AclWI	GGATC	4 cut(s)	653, 934, 1218, 1559
AcoI	YGGCCR	2 cut(s)	1119, 1446
AcsI	RAATTY	2 cut(s)	627, 1002
AcuI	CTGAAG	2 cut(s)	380, 1296
AfaI	GTAC	1 cut(s)	176
AfeI	AGCGCT	1 cut(s)	797
AfiI	CCNNNNNNNGG	5 cut(s)	382, 671, 672, 673, 1548
AgsI	TTSAA	6 cut(s)	215, 223, 343, 455, 1007, 1397
AhlI	ACTAGT	1 cut(s)	1562
AjnI	CCWGG	3 cut(s)	490, 670, 1116
AluBI	AGCT	6 cut(s)	36, 419, 730, 762, 1310, 1538
AluI	AGCT	6 cut(s)	36, 419, 730, 762, 1310, 1538
Alw21I	GWGCWC	1 cut(s)	1155
Alw26I	GTCTC	5 cut(s)	295, 302, 810, 904, 915
AlwI	GGATC	4 cut(s)	653, 934, 1218, 1559
Aor13HI	TCCGGA	1 cut(s)	642
Aor51HI	AGCGCT	1 cut(s)	797
AoxI	GGCC	4 cut(s)	580, 1119, 1423, 1446
ApeKI	GCWGC	5 cut(s)	92, 109, 331, 798, 1307
ApoI	RAATTY	2 cut(s)	627, 1002
ArsI	GACNNNNNNTTYG	2 cut(s)	1496, 1528
AseI	ATTAAT	2 cut(s)	204, 1106
Asp700I	GAANNNNTTC	2 cut(s)	889, 1002
AspLEI	GCGC	2 cut(s)	798, 1320
AspS9I	GGNCC	2 cut(s)	739, 1045
AsuHPI	GGTGA	7 cut(s)	49, 161, 480, 734, 797, 1106, 1570
AsuII	TTCGAA	1 cut(s)	1267
AsuNHI	GCTAGC	1 cut(s)	1534
AvaII	GGWCC	2 cut(s)	739, 1045
AxyI	CCTNAGG	1 cut(s)	1641
BalI	TGGCCA	2 cut(s)	1121, 1448
BanII	GRGCYC	2 cut(s)	666, 995
BarI	GAAGNNNNNNTAC	2 cut(s)	59, 91
BbsI	GAAGAC	1 cut(s)	1502
Bbv12I	GWGCWC	1 cut(s)	1155
BbvI	GCAGC	5 cut(s)	79, 96, 343, 785, 1319
BccI	CCATC	5 cut(s)	137, 917, 1013, 1252, 1457
BceAI	ACGGC	1 cut(s)	1438
BcgI	CGANNNNNNTGC	2 cut(s)	1490, 1524
BciT130I	CCWGG	3 cut(s)	492, 672, 1118
BciVI	GTATCC	1 cut(s)	626
BcoDI	GTCTC	5 cut(s)	295, 302, 810, 904, 915
BcuI	ACTAGT	1 cut(s)	1562
BfaI	CTAG	4 cut(s)	113, 294, 1535, 1563
BfmI	CTRYAG	1 cut(s)	237
BfoI	RGCGCY	1 cut(s)	799
BfuAI	ACCTGC	1 cut(s)	244
BfuI	GTATCC	1 cut(s)	626
BisI	GCNGC	5 cut(s)	93, 110, 332, 799, 1308
BlpI	GCTNAGC	1 cut(s)	716
BlsI	GCNGC	5 cut(s)	94, 111, 333, 800, 1309
Bme1390I	CCNGG	3 cut(s)	492, 672, 1118
Bme18I	GGWCC	2 cut(s)	739, 1045
BmgT120I	GGNCC	2 cut(s)	739, 1045
BmiI	GGNNCC	5 cut(s)	573, 663, 678, 741, 1062
BmrFI	CCNGG	3 cut(s)	492, 672, 1118
BmsI	GCATC	5 cut(s)	104, 394, 1269, 1392, 1498
BmtI	GCTAGC	1 cut(s)	1538
BpiI	GAAGAC	1 cut(s)	1502
BpmI	CTGGAG	2 cut(s)	441, 1275
Bpu1102I	GCTNAGC	1 cut(s)	716
Bpu14I	TTCGAA	1 cut(s)	1267
BpuEI	CTTGAG	3 cut(s)	249, 573, 886
Bsa29I	ATCGAT	2 cut(s)	546, 648
BsaJI	CCNNGG	4 cut(s)	376, 491, 671, 1064
BsaWI	WCCGGW	1 cut(s)	642
Bsc4I	CCNNNNNNNGG	5 cut(s)	382, 671, 672, 673, 1548
Bse1I	ACTGG	2 cut(s)	1122, 1292
Bse21I	CCTNAGG	1 cut(s)	1641
BseAI	TCCGGA	1 cut(s)	642
BseBI	CCWGG	3 cut(s)	492, 672, 1118
BseCI	ATCGAT	2 cut(s)	546, 648
BseDI	CCNNGG	4 cut(s)	376, 491, 671, 1064
BseGI	GGATG	5 cut(s)	95, 1034, 1263, 1284, 1531
BseLI	CCNNNNNNNGG	5 cut(s)	382, 671, 672, 673, 1548
BseMII	CTCAG	7 cut(s)	44, 133, 270, 726, 1008, 1605, 1632
BseNI	ACTGG	2 cut(s)	1122, 1292
BseRI	GAGGAG	1 cut(s)	806
BseXI	GCAGC	5 cut(s)	79, 96, 343, 785, 1319
Bsh1236I	CGCG	1 cut(s)	1050
BshFI	GGCC	4 cut(s)	582, 1121, 1425, 1448
BshVI	ATCGAT	2 cut(s)	546, 648
BsiHKAI	GWGCWC	1 cut(s)	1155
BsiSI	CCGG	2 cut(s)	26, 643
BslFI	GGGAC	3 cut(s)	550, 1403, 1477
BslI	CCNNNNNNNGG	5 cut(s)	382, 671, 672, 673, 1548
BsmAI	GTCTC	5 cut(s)	295, 302, 810, 904, 915
BsmBI	CGTCTC	1 cut(s)	810
BsmFI	GGGAC	3 cut(s)	550, 1403, 1477
BsnI	GGCC	4 cut(s)	582, 1121, 1425, 1448
Bsp119I	TTCGAA	1 cut(s)	1267
Bsp1286I	GDGCHC	3 cut(s)	666, 995, 1155
Bsp13I	TCCGGA	1 cut(s)	642
Bsp143I	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
Bsp1720I	GCTNAGC	1 cut(s)	716
Bsp19I	CCATGG	1 cut(s)	1064
BspACI	CCGC	7 cut(s)	512, 568, 720, 1043, 1048, 1187, 1236
BspANI	GGCC	4 cut(s)	582, 1121, 1425, 1448
BspCNI	CTCAG	7 cut(s)	43, 132, 271, 727, 1007, 1604, 1633
BspDI	ATCGAT	2 cut(s)	546, 648
BspEI	TCCGGA	1 cut(s)	642
BspFNI	CGCG	1 cut(s)	1050
BspHI	TCATGA	2 cut(s)	775, 1491
BspLI	GGNNCC	5 cut(s)	573, 663, 678, 741, 1062
BspMAI	CTGCAG	1 cut(s)	241
BspMI	ACCTGC	1 cut(s)	244
BspOI	GCTAGC	1 cut(s)	1538
BspPI	GGATC	4 cut(s)	653, 934, 1218, 1559
BspQI	GCTCTTC	2 cut(s)	321, 450
BspT104I	TTCGAA	1 cut(s)	1267
BsrI	ACTGG	2 cut(s)	1122, 1292
BssECI	CCNNGG	4 cut(s)	376, 491, 671, 1064
BssMI	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
BssT1I	CCWWGG	2 cut(s)	376, 1064
Bst2UI	CCWGG	3 cut(s)	492, 672, 1118
Bst4CI	ACNGT	3 cut(s)	80, 607, 1015
Bst6I	CTCTTC	4 cut(s)	321, 450, 1200, 1220
BstBI	TTCGAA	1 cut(s)	1267
BstC8I	GCNNGC	2 cut(s)	1536, 1571
BstDSI	CCRYGG	1 cut(s)	1064
BstENI	CCTNNNNNAGG	1 cut(s)	1546
BstF5I	GGATG	5 cut(s)	95, 1034, 1263, 1284, 1531
BstFNI	CGCG	1 cut(s)	1050
BstH2I	RGCGCY	1 cut(s)	799
BstHHI	GCGC	2 cut(s)	798, 1320
BstKTI	GATC	6 cut(s)	9, 57, 648, 929, 1213, 1554
BstMAI	GTCTC	5 cut(s)	295, 302, 810, 904, 915
BstMBI	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
BstMWI	GCNNNNNNNGC	4 cut(s)	236, 404, 425, 511
BstNI	CCWGG	3 cut(s)	492, 672, 1118
BstSCI	CCNGG	3 cut(s)	490, 670, 1116
BstSFI	CTRYAG	1 cut(s)	237
BstUI	CGCG	1 cut(s)	1050
BstV1I	GCAGC	5 cut(s)	79, 96, 343, 785, 1319
BstV2I	GAAGAC	1 cut(s)	1502
BstX2I	RGATCY	1 cut(s)	1210
BstYI	RGATCY	1 cut(s)	1210
Bsu15I	ATCGAT	2 cut(s)	546, 648
Bsu36I	CCTNAGG	1 cut(s)	1641
BsuI	GTATCC	1 cut(s)	626
BsuRI	GGCC	4 cut(s)	582, 1121, 1425, 1448
BsuTUI	ATCGAT	2 cut(s)	546, 648
BtgI	CCRYGG	1 cut(s)	1064
BtsCI	GGATG	5 cut(s)	95, 1034, 1263, 1284, 1531
BtsI	GCAGTG	1 cut(s)	512
BtsIMutI	CAGTG	4 cut(s)	512, 1129, 1299, 1320
BveI	ACCTGC	1 cut(s)	244
Cac8I	GCNNGC	2 cut(s)	1536, 1571
CciI	TCATGA	2 cut(s)	775, 1491
CfoI	GCGC	2 cut(s)	798, 1320
Cfr13I	GGNCC	2 cut(s)	739, 1045
ClaI	ATCGAT	2 cut(s)	546, 648
CpoI	CGGWCCG	1 cut(s)	1045
Csp6I	GTAC	1 cut(s)	175
CspI	CGGWCCG	1 cut(s)	1045
CviAII	CATG	8 cut(s)	106, 348, 429, 776, 1065, 1275, 1434, 1492
CviQI	GTAC	1 cut(s)	175
DpnI	GATC	6 cut(s)	8, 56, 647, 928, 1212, 1553
DpnII	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
DraI	TTTAAA	1 cut(s)	1249
EaeI	YGGCCR	2 cut(s)	1119, 1446
Eam1104I	CTCTTC	4 cut(s)	321, 450, 1200, 1220
EarI	CTCTTC	4 cut(s)	321, 450, 1200, 1220
Eco130I	CCWWGG	2 cut(s)	376, 1064
Eco24I	GRGCYC	2 cut(s)	666, 995
Eco32I	GATATC	1 cut(s)	1089
Eco47I	GGWCC	2 cut(s)	739, 1045
Eco47III	AGCGCT	1 cut(s)	797
Eco57I	CTGAAG	2 cut(s)	380, 1296
Eco81I	CCTNAGG	1 cut(s)	1641
EcoNI	CCTNNNNNAGG	1 cut(s)	1546
EcoO109I	RGGNCCY	1 cut(s)	739
EcoRI	GAATTC	2 cut(s)	627, 1002
EcoRII	CCWGG	3 cut(s)	490, 670, 1116
EcoRV	GATATC	1 cut(s)	1089
EcoT14I	CCWWGG	2 cut(s)	376, 1064
EcoT22I	ATGCAT	1 cut(s)	1513
EcoT38I	GRGCYC	2 cut(s)	666, 995
ErhI	CCWWGG	2 cut(s)	376, 1064
Esp3I	CGTCTC	1 cut(s)	810
FaeI	CATG	8 cut(s)	109, 351, 432, 779, 1068, 1278, 1437, 1495
FaqI	GGGAC	3 cut(s)	550, 1403, 1477
FatI	CATG	8 cut(s)	105, 347, 428, 775, 1064, 1274, 1433, 1491
FauI	CCCGC	1 cut(s)	561
Fnu4HI	GCNGC	5 cut(s)	93, 110, 332, 799, 1308
FokI	GGATG	5 cut(s)	82, 1021, 1270, 1291, 1538
FriOI	GRGCYC	2 cut(s)	666, 995
Fsp4HI	GCNGC	5 cut(s)	93, 110, 332, 799, 1308
FspBI	CTAG	4 cut(s)	113, 294, 1535, 1563
GlaI	GCGC	2 cut(s)	797, 1319
GluI	GCNGC	5 cut(s)	93, 110, 332, 799, 1308
GsuI	CTGGAG	2 cut(s)	441, 1275
HaeII	RGCGCY	1 cut(s)	799
HaeIII	GGCC	4 cut(s)	582, 1121, 1425, 1448
HapII	CCGG	2 cut(s)	26, 643
HhaI	GCGC	2 cut(s)	798, 1320
Hin1II	CATG	8 cut(s)	109, 351, 432, 779, 1068, 1278, 1437, 1495
Hin6I	GCGC	2 cut(s)	796, 1318
HinP1I	GCGC	2 cut(s)	796, 1318
HinfI	GANTC	7 cut(s)	22, 247, 364, 446, 1145, 1581, 1595
HpaII	CCGG	2 cut(s)	26, 643
HphI	GGTGA	7 cut(s)	49, 161, 480, 734, 797, 1106, 1570
Hpy166II	GTNNAC	1 cut(s)	488
Hpy188I	TCNGA	8 cut(s)	33, 122, 246, 360, 997, 1141, 1150, 1594
Hpy188III	TCNNGA	9 cut(s)	133, 212, 251, 643, 776, 815, 1366, 1492, 1616
Hpy8I	GTNNAC	1 cut(s)	488
HpyAV	CCTTC	3 cut(s)	677, 992, 1248
HpyCH4III	ACNGT	3 cut(s)	80, 607, 1015
HpyCH4IV	ACGT	1 cut(s)	889
HpyCH4V	TGCA	9 cut(s)	95, 239, 428, 700, 852, 1102, 1282, 1336, 1511
HpyF10VI	GCNNNNNNNGC	4 cut(s)	236, 404, 425, 511
HpySE526I	ACGT	1 cut(s)	889
Hsp92II	CATG	8 cut(s)	109, 351, 432, 779, 1068, 1278, 1437, 1495
HspAI	GCGC	2 cut(s)	796, 1318
Kpn2I	TCCGGA	1 cut(s)	642
Kzo9I	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
LguI	GCTCTTC	2 cut(s)	321, 450
LmnI	GCTCC	7 cut(s)	235, 661, 793, 1060, 1150, 1189, 1294
Lsp1109I	GCAGC	5 cut(s)	79, 96, 343, 785, 1319
LweI	GCATC	5 cut(s)	104, 394, 1269, 1392, 1498
MaeI	CTAG	4 cut(s)	113, 294, 1535, 1563
MaeII	ACGT	1 cut(s)	889
MaeIII	GTNAC	4 cut(s)	155, 557, 1094, 1558
MalI	GATC	6 cut(s)	8, 56, 647, 928, 1212, 1553
MboI	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
MboII	GAAGA	9 cut(s)	79, 338, 373, 467, 1181, 1187, 1207, 1281, 1507
MfeI	CAATTG	2 cut(s)	1205, 1397
MflI	RGATCY	1 cut(s)	1210
MhlI	GDGCHC	3 cut(s)	666, 995, 1155
MlsI	TGGCCA	2 cut(s)	1121, 1448
MluNI	TGGCCA	2 cut(s)	1121, 1448
MlyI	GAGTC	2 cut(s)	256, 1575
MmeI	TCCRAC	2 cut(s)	822, 844
Mox20I	TGGCCA	2 cut(s)	1121, 1448
Mph1103I	ATGCAT	1 cut(s)	1513
MroI	TCCGGA	1 cut(s)	642
MroXI	GAANNNNTTC	2 cut(s)	889, 1002
MscI	TGGCCA	2 cut(s)	1121, 1448
MseI	TTAA	7 cut(s)	204, 954, 1106, 1161, 1248, 1544, 1587
MslI	CAYNNNNRTG	2 cut(s)	62, 705
Msp20I	TGGCCA	2 cut(s)	1121, 1448
MspA1I	CMGCKG	1 cut(s)	762
MspI	CCGG	2 cut(s)	26, 643
MspR9I	CCNGG	3 cut(s)	492, 672, 1118
MunI	CAATTG	2 cut(s)	1205, 1397
MvaI	CCWGG	3 cut(s)	492, 672, 1118
MvnI	CGCG	1 cut(s)	1050
MwoI	GCNNNNNNNGC	4 cut(s)	236, 404, 425, 511
NcoI	CCATGG	1 cut(s)	1064
NdeII	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
NheI	GCTAGC	1 cut(s)	1534
NlaIII	CATG	8 cut(s)	109, 351, 432, 779, 1068, 1278, 1437, 1495
NlaIV	GGNNCC	5 cut(s)	573, 663, 678, 741, 1062
NmuCI	GTSAC	2 cut(s)	1094, 1558
NsiI	ATGCAT	1 cut(s)	1513
NspV	TTCGAA	1 cut(s)	1267
PagI	TCATGA	2 cut(s)	775, 1491
PaqCI	CACCTGC	1 cut(s)	244
PciSI	GCTCTTC	2 cut(s)	321, 450
PdmI	GAANNNNTTC	2 cut(s)	889, 1002
PfeI	GAWTC	5 cut(s)	22, 364, 446, 1145, 1595
PkrI	GCNGC	5 cut(s)	94, 111, 333, 800, 1309
PleI	GAGTC	2 cut(s)	255, 1575
PpsI	GAGTC	2 cut(s)	255, 1575
PpuMI	RGGWCCY	1 cut(s)	739
PshBI	ATTAAT	2 cut(s)	204, 1106
Psp5II	RGGWCCY	1 cut(s)	739
Psp6I	CCWGG	3 cut(s)	490, 670, 1116
PspGI	CCWGG	3 cut(s)	490, 670, 1116
PspN4I	GGNNCC	5 cut(s)	573, 663, 678, 741, 1062
PspPI	GGNCC	2 cut(s)	739, 1045
PspPPI	RGGWCCY	1 cut(s)	739
PstI	CTGCAG	1 cut(s)	241
PsuI	RGATCY	1 cut(s)	1210
PvuII	CAGCTG	1 cut(s)	762
RsaI	GTAC	1 cut(s)	176
RsaNI	GTAC	1 cut(s)	175
RseI	CAYNNNNRTG	2 cut(s)	62, 705
Rsr2I	CGGWCCG	1 cut(s)	1045
RsrII	CGGWCCG	1 cut(s)	1045
SapI	GCTCTTC	2 cut(s)	321, 450
SaqAI	TTAA	7 cut(s)	204, 954, 1106, 1161, 1248, 1544, 1587
SatI	GCNGC	5 cut(s)	93, 110, 332, 799, 1308
Sau3AI	GATC	6 cut(s)	6, 54, 645, 926, 1210, 1551
Sau96I	GGNCC	2 cut(s)	739, 1045
SchI	GAGTC	2 cut(s)	256, 1575
ScrFI	CCNGG	3 cut(s)	492, 672, 1118
SduI	GDGCHC	3 cut(s)	666, 995, 1155
SfaNI	GCATC	5 cut(s)	104, 394, 1269, 1392, 1498
SfcI	CTRYAG	1 cut(s)	237
SfuI	TTCGAA	1 cut(s)	1267
SinI	GGWCC	2 cut(s)	739, 1045
SmiMI	CAYNNNNRTG	2 cut(s)	62, 705
SmlI	CTYRAG	3 cut(s)	264, 588, 901
SmoI	CTYRAG	3 cut(s)	264, 588, 901
SpeI	ACTAGT	1 cut(s)	1562
SsiI	CCGC	7 cut(s)	512, 568, 720, 1043, 1048, 1187, 1236
SspMI	CTAG	4 cut(s)	113, 294, 1535, 1563
StyD4I	CCNGG	3 cut(s)	490, 670, 1116
StyI	CCWWGG	2 cut(s)	376, 1064
TaaI	ACNGT	3 cut(s)	80, 607, 1015
TaiI	ACGT	1 cut(s)	892
TaqI	TCGA	5 cut(s)	402, 546, 648, 1267, 1609
TaqII	GACCGA	1 cut(s)	1514
TatI	WGTACW	1 cut(s)	174
TfiI	GAWTC	5 cut(s)	22, 364, 446, 1145, 1595
Tru1I	TTAA	7 cut(s)	204, 954, 1106, 1161, 1248, 1544, 1587
Tru9I	TTAA	7 cut(s)	204, 954, 1106, 1161, 1248, 1544, 1587
TscAI	CASTG	4 cut(s)	512, 1129, 1299, 1320
TseFI	GTSAC	2 cut(s)	1094, 1558
TseI	GCWGC	5 cut(s)	92, 109, 331, 798, 1307
Tsp45I	GTSAC	2 cut(s)	1094, 1558
TspDTI	ATGAA	8 cut(s)	80, 94, 339, 495, 545, 1207, 1508, 1542
TspGWI	ACGGA	2 cut(s)	639, 1508
TspRI	CASTG	4 cut(s)	512, 1129, 1299, 1320
VpaK11BI	GGWCC	2 cut(s)	739, 1045
VspI	ATTAAT	2 cut(s)	204, 1106
XagI	CCTNNNNNAGG	1 cut(s)	1546
XapI	RAATTY	2 cut(s)	627, 1002
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1623
XmnI	GAANNNNTTC	2 cut(s)	889, 1002
XspI	CTAG	4 cut(s)	113, 294, 1535, 1563
Zsp2I	ATGCAT	1 cut(s)	1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.