Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012265

Physical Location & Seq

Genomic Coordinates Reverse (-)

9715342 .. 9720629

Gene Structure 5288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G27900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGCGAACCTTCCGATCCTTCAATTTGAAGAGAAGATCGTGGAAACAGTGGAGAAGAATTCAGTGGTAGTTATAATTGGAGAAACCGGTTCTGGGAAGAGTACTCAGCTCTCTCAGATACTTCATCGACATGGTTACACAAAGTCCGGCGTCATCGCCATCACTCAGCCCCGACGTGTTGCTGCCGTTTCCGTTGCCAGGCGAGTCGCACAGGAGCTTGATGTACCTCTTGGAGAAGATGTTGGTTATGCGATACGTTTCGAGGATAGAACTACGAGTAAAACACGGATTAAGTACCTCACAGATGGAGTTCTACTTCGTGAGAGTCTGTCCAATCCAATGCTTGATGATTATTCTGTTATCATATTGGATGAGGCTCACGAGAGGAGTTTAAACACGGATATTCTGTTGGGTCTAGTGAAACGGTTGGTTAGAATCCGTGCATCCAACTTTAAAGTTCTTATAACCTCTGCAACACTTGACGGCGAAAAGGTTTCTGAATTCTTTTCGGGCTGCCCTGTGCTGAATGTACCTGGAAAATTATACCCCGTGGAAATATTATACAGCAAAGAGCGTCCTGTCAGCTATATTGAGTCATCTCTGAAAGTAGCTATTGATATACATGTTCGTGAGCCAGAAGGTGATATTTTAATCTTCATGACCGGACAGGATGATATTGAAAAATTAGTATCAAGGCTAGAGGAAAAAGTACGAAGCTTAGCAGAAGGATCCTGTATGGATGCTATTATTTATCCTCTTCACGGTTCTTTGCCCCCTGAAATGCAGGTTCGTGTCTTTAGTCCTCCTCCTCCAAACTGCCGCAGATTTATTGTTTCTACCAATATTGCTGAAACTTCCCTTACTGTGGACGGGGTTGTGTATGTAATTGATTCCGGGTATGTGAAGCAAAGACAATATAACCCATCAAGTGGAATGTTTTCTCTTGATGTTATTCAAATTAGCAAAGTGCAAGCTAACCAACGTGCTGGACGTGCTGGCCGAACAAGACCGGGGAAATGTTATCGTTTATACCCATTGGCAGTCTACCGAGATGACTTCCTTGATGCAACTATTCCTGAAATCCAACGAACTTCTCTTGCCGGGAGTGTTCTATACTTGAAATCATTGGATCTTCCTGATATTGACATTCTCAAGTTCGATTTTCTTGATGCTCCTTCATCTGAGTCATTAGAAGATGCGTTGAAGCAATTGTATTTCATTGATGCAATTGATGAGAATGGAGCAATAACAAGGATTGGACGGACAATGTCTGATCTTCCACTAGAACCATCATTGTCAAGAACATTGATAGAAGCGAATGAAACCGGTTGCTTATCTCAAGCTCTAACAGTTGTTGCTATGCTGTCAGCAGAGACAACTCTTCTTCCTGCTAGGAGTAAACCCAGTGAAAAGAAGAGGAAACATGATGAAGATTCTAATCTTCCTAATGGATCCGGATATGGTGATCACATTCAACTGCTACAGATTTTCGAATCTTGGGACCGTACTAATTATGATCCTGTATGGTGCAAAGAGAACGGCATGCAGGTGCGAGGGATGGTGTTTGTCAAAGATGTTAGAAGACAGTTATGTCAGATTATGCAGAAAATATCCAAAGATCGATTGGAAGTTGGGGCAGATGGTAGGAAGAGTTCAAGCCGAGACGACTACAGGAAGTTGAGGAAAGCTCTATGCGTTGGTAATGCAAACCAAATTGCTGAGAGAATGCTTCGTCACAATGGATACCGGACTCTTAGTTTCCAGTCCCAGCTAGTCCAGGTGCATCCATCATCTGTATTGAGTGCCGACAATGACGGAATGATGCCTAACTACGTAGTGTACCATGAGCTGATTTCCACCACACGTCCGTTCATGCGGAATGTTTGTGCAGTAGATATGGCATGGGTGGCTCCCATCAAAAGAAAGATCGAGAAATTAAATGTCAGAAAATTGAGCGGTGGACCGGCTCCCTCTTTCAAAGTACCTGAGGAGAAGACGGAGTTGTCTAAAAACAATGCAGAAACACCTGCAGTTTCTGAAAATGTTGAGAGTCGGATTGAAGCAGCCAGAGAACGCTTTCTTGCTCGTAAAGGACAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

AAA_22 DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

700

Amino Acids

78.37

Weight (kDa)

8.18

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	11 - 167	1.5e-08	DEAD/DEAH box helicase
AAA_22	PF13401	20 - 146	2.5e-09	AAA domain
Helicase_C	PF00271	205 - 335	1.5e-11	Helicase conserved C-terminal domain
WHD_HA2	PF04408	400 - 428	2.2e-09	Helicase associated domain (HA2), winged-helix
HA2_C	PF21010	429 - 493	3.7e-10	Helicase associated domain (HA2), ratchet-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27900 AT1G27900 AT1G27900
fragaria_vesca	FvH4_4g24140 FvH4_4g24140
malus_domestica	MD13G1115200.v1.1
prunus_persica	Prupe.1G232100_v2.0.a1 Prupe.1G232100_v2.0.a1
pyrus_communis	pycom13g09970
rosa_chinensis	RchiOBHm_Chr4g0430911
rosa_laevigata	RLG00000006939
rosa_multiflora	Rmu_sc0006263.1_g000011
rosa_roxburghii	Rroxscaffold_5G00372600
rosa_rugosa	Rorug04G0247300
rosa_samantha	Rh4AG302800 Rh4AG303700 Rh4BG310900 Rh4CG327300
rosa_wichuraiana	Rw4G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	74, 464
AarI	CACCTGC	2 cut(s)	1537, 2035
AasI	GACNNNNNNGTC	2 cut(s)	1590, 2002
Acc36I	ACCTGC	3 cut(s)	775, 1537, 2035
AccB7I	CCANNNNNTGG	1 cut(s)	929
AccBSI	CCGCTC	1 cut(s)	1956
AccI	GTMKAC	1 cut(s)	1044
AccIII	TCCGGA	1 cut(s)	1454
AciI	CCGC	3 cut(s)	820, 1876, 1956
AclWI	GGATC	7 cut(s)	10, 723, 736, 1137, 1446, 1459, 1511
AcoI	YGGCCR	1 cut(s)	997
AcsI	RAATTY	2 cut(s)	58, 500
AcyI	GRCGYC	1 cut(s)	150
AfaI	GTAC	8 cut(s)	103, 225, 296, 531, 711, 1507, 1841, 1983
AfiI	CCNNNNNNNGG	5 cut(s)	93, 198, 761, 865, 929
AflIII	ACRYGT	3 cut(s)	175, 622, 1862
AgeI	ACCGGT	2 cut(s)	86, 1325
AjiI	CACGTC	3 cut(s)	176, 992, 1865
AjnI	CCWGG	3 cut(s)	197, 532, 1776
Alw26I	GTCTC	2 cut(s)	1367, 1656
AlwI	GGATC	7 cut(s)	10, 723, 736, 1137, 1446, 1459, 1511
AlwNI	CAGNNNCTG	1 cut(s)	2036
Aor13HI	TCCGGA	1 cut(s)	1454
AoxI	GGCC	1 cut(s)	997
ApeKI	GCWGC	3 cut(s)	182, 513, 2063
ApoI	RAATTY	2 cut(s)	58, 500
AsiGI	ACCGGT	2 cut(s)	86, 1325
Asp700I	GAANNNNTTC	2 cut(s)	937, 2076
AspS9I	GGNCC	2 cut(s)	1501, 1961
AsuC2I	CCSGG	3 cut(s)	895, 1011, 1102
AsuHPI	GGTGA	2 cut(s)	653, 1475
AsuII	TTCGAA	1 cut(s)	1491
AvaII	GGWCC	2 cut(s)	1501, 1961
AxyI	CCTNAGG	1 cut(s)	1986
BamHI	GGATCC	2 cut(s)	728, 1451
BauI	CACGAG	1 cut(s)	380
BbsI	GAAGAC	2 cut(s)	1588, 2000
BbvI	GCAGC	3 cut(s)	169, 500, 2075
BccI	CCATC	8 cut(s)	167, 299, 931, 1297, 1552, 1634, 1795, 1922
BceAI	ACGGC	3 cut(s)	170, 499, 1555
BciT130I	CCWGG	3 cut(s)	199, 534, 1778
BciVI	GTATCC	1 cut(s)	1736
BclI	TGATCA	1 cut(s)	1465
BcnI	CCSGG	3 cut(s)	895, 1011, 1102
BcoDI	GTCTC	2 cut(s)	1367, 1656
BfaI	CTAG	5 cut(s)	416, 698, 1283, 1392, 1772
BfmI	CTRYAG	3 cut(s)	1481, 1669, 2028
BfuAI	ACCTGC	3 cut(s)	775, 1537, 2035
BfuI	GTATCC	1 cut(s)	1736
BisI	GCNGC	4 cut(s)	183, 514, 820, 2064
BlpI	GCTNAGC	1 cut(s)	718
BlsI	GCNGC	4 cut(s)	184, 515, 821, 2065
BmcAI	AGTACT	1 cut(s)	103
Bme1390I	CCNGG	6 cut(s)	199, 534, 895, 1011, 1102, 1778
Bme18I	GGWCC	2 cut(s)	1501, 1961
BmgBI	CACGTC	3 cut(s)	176, 992, 1865
BmgT120I	GGNCC	2 cut(s)	1501, 1961
BmiI	GGNNCC	5 cut(s)	730, 1453, 1502, 1911, 1968
BmrFI	CCNGG	6 cut(s)	199, 534, 895, 1011, 1102, 1778
BmrI	ACTGGG	1 cut(s)	1398
BmsI	GCATC	8 cut(s)	452, 730, 1054, 1159, 1186, 1213, 1792, 1812
BmuI	ACTGGG	1 cut(s)	1398
BpiI	GAAGAC	2 cut(s)	1588, 2000
BplI	GAGNNNNNCTC	2 cut(s)	1672, 1704
Bpu1102I	GCTNAGC	1 cut(s)	718
Bpu14I	TTCGAA	1 cut(s)	1491
BpuEI	CTTGAG	2 cut(s)	1136, 1323
BpuMI	CCSGG	3 cut(s)	895, 1011, 1102
Bsa29I	ATCGAT	1 cut(s)	1621
BsaAI	YACGTR	1 cut(s)	1834
BsaBI	GATNNNNATC	1 cut(s)	1437
BsaHI	GRCGYC	1 cut(s)	150
BsaJI	CCNNGG	2 cut(s)	549, 1010
BsaWI	WCCGGW	5 cut(s)	86, 662, 1325, 1454, 1746
BsaXI	ACNNNNNCTCC	2 cut(s)	225, 255
Bsc4I	CCNNNNNNNGG	5 cut(s)	93, 198, 761, 865, 929
Bse118I	RCCGGY	3 cut(s)	86, 1325, 1963
Bse1I	ACTGG	2 cut(s)	1404, 1762
Bse21I	CCTNAGG	1 cut(s)	1986
Bse8I	GATNNNNATC	1 cut(s)	1437
BseAI	TCCGGA	1 cut(s)	1454
BseBI	CCWGG	3 cut(s)	199, 534, 1778
BseCI	ATCGAT	1 cut(s)	1621
BseDI	CCNNGG	2 cut(s)	549, 1010
BseGI	GGATG	6 cut(s)	376, 443, 676, 745, 1563, 1783
BseJI	GATNNNNATC	1 cut(s)	1437
BseLI	CCNNNNNNNGG	5 cut(s)	93, 198, 761, 865, 929
BseMII	CTCAG	6 cut(s)	119, 128, 179, 1173, 1710, 1977
BseNI	ACTGG	2 cut(s)	1404, 1762
BseRI	GAGGAG	4 cut(s)	400, 795, 798, 2003
BseXI	GCAGC	3 cut(s)	169, 500, 2075
BseYI	CCCAGC	1 cut(s)	1767
BsgI	GTGCAG	1 cut(s)	1908
BshFI	GGCC	1 cut(s)	999
BshTI	ACCGGT	2 cut(s)	86, 1325
BshVI	ATCGAT	1 cut(s)	1621
BslFI	GGGAC	2 cut(s)	1514, 1750
BslI	CCNNNNNNNGG	5 cut(s)	93, 198, 761, 865, 929
BsmAI	GTCTC	2 cut(s)	1367, 1656
BsmBI	CGTCTC	1 cut(s)	1656
BsmFI	GGGAC	2 cut(s)	1514, 1750
BsmI	GAATGC	1 cut(s)	1731
BsnI	GGCC	1 cut(s)	999
Bsp119I	TTCGAA	1 cut(s)	1491
Bsp13I	TCCGGA	1 cut(s)	1454
Bsp1720I	GCTNAGC	1 cut(s)	718
BspACI	CCGC	3 cut(s)	820, 1876, 1956
BspANI	GGCC	1 cut(s)	999
BspCNI	CTCAG	6 cut(s)	118, 127, 178, 1174, 1711, 1978
BspDI	ATCGAT	1 cut(s)	1621
BspEI	TCCGGA	1 cut(s)	1454
BspHI	TCATGA	1 cut(s)	657
BspLI	GGNNCC	5 cut(s)	730, 1453, 1502, 1911, 1968
BspMAI	CTGCAG	1 cut(s)	2032
BspMI	ACCTGC	3 cut(s)	775, 1537, 2035
BspPI	GGATC	7 cut(s)	10, 723, 736, 1137, 1446, 1459, 1511
BspT104I	TTCGAA	1 cut(s)	1491
BsrBI	CCGCTC	1 cut(s)	1956
BsrFI	RCCGGY	3 cut(s)	86, 1325, 1963
BsrI	ACTGG	2 cut(s)	1404, 1762
BssAI	RCCGGY	3 cut(s)	86, 1325, 1963
BssECI	CCNNGG	2 cut(s)	549, 1010
BssNI	GRCGYC	1 cut(s)	150
BssSI	CACGAG	1 cut(s)	380
Bst2BI	CACGAG	1 cut(s)	380
Bst2UI	CCWGG	3 cut(s)	199, 534, 1778
Bst4CI	ACNGT	7 cut(s)	49, 426, 764, 865, 1351, 1505, 1587
Bst6I	CTCTTC	6 cut(s)	24, 92, 762, 1386, 1409, 1643
BstACI	GRCGYC	1 cut(s)	150
BstBAI	YACGTR	1 cut(s)	1834
BstBI	TTCGAA	1 cut(s)	1491
BstC8I	GCNNGC	3 cut(s)	972, 997, 1544
BstDEI	CTNAG	8 cut(s)	105, 114, 165, 718, 1182, 1719, 1754, 1986
BstDSI	CCRYGG	1 cut(s)	549
BstF5I	GGATG	6 cut(s)	376, 443, 676, 745, 1563, 1783
BstMAI	GTCTC	2 cut(s)	1367, 1656
BstMWI	GCNNNNNNNGC	2 cut(s)	992, 1907
BstNI	CCWGG	3 cut(s)	199, 534, 1778
BstNSI	RCATGY	2 cut(s)	626, 1546
BstSCI	CCNGG	6 cut(s)	197, 532, 893, 1009, 1100, 1776
BstSFI	CTRYAG	3 cut(s)	1481, 1669, 2028
BstSNI	TACGTA	1 cut(s)	1834
BstV1I	GCAGC	3 cut(s)	169, 500, 2075
BstV2I	GAAGAC	2 cut(s)	1588, 2000
BstX2I	RGATCY	3 cut(s)	728, 1129, 1451
BstXI	CCANNNNNNTGG	1 cut(s)	986
BstYI	RGATCY	3 cut(s)	728, 1129, 1451
Bsu15I	ATCGAT	1 cut(s)	1621
Bsu36I	CCTNAGG	1 cut(s)	1986
BsuI	GTATCC	1 cut(s)	1736
BsuRI	GGCC	1 cut(s)	999
BsuTUI	ATCGAT	1 cut(s)	1621
BtgI	CCRYGG	1 cut(s)	549
BtgZI	GCGATG	1 cut(s)	139
BtrI	CACGTC	3 cut(s)	176, 992, 1865
BtsCI	GGATG	6 cut(s)	376, 443, 676, 745, 1563, 1783
BtsIMutI	CAGTG	3 cut(s)	54, 69, 1411
BveI	ACCTGC	3 cut(s)	775, 1537, 2035
Cac8I	GCNNGC	3 cut(s)	972, 997, 1544
CaiI	CAGNNNCTG	1 cut(s)	2036
CciI	TCATGA	1 cut(s)	657
Cfr10I	RCCGGY	3 cut(s)	86, 1325, 1963
Cfr13I	GGNCC	2 cut(s)	1501, 1961
ClaI	ATCGAT	1 cut(s)	1621
CseI	GACGC	2 cut(s)	139, 563
Csp6I	GTAC	8 cut(s)	102, 224, 295, 530, 710, 1506, 1840, 1982
CspAI	ACCGGT	2 cut(s)	86, 1325
CviAII	CATG	8 cut(s)	131, 623, 658, 1424, 1543, 1844, 1873, 1902
CviQI	GTAC	8 cut(s)	102, 224, 295, 530, 710, 1506, 1840, 1982
DdeI	CTNAG	8 cut(s)	105, 114, 165, 718, 1182, 1719, 1754, 1986
DraI	TTTAAA	2 cut(s)	393, 454
DrdI	GACNNNNNNGTC	2 cut(s)	1590, 2002
DseDI	GACNNNNNNGTC	2 cut(s)	1590, 2002
EaeI	YGGCCR	1 cut(s)	997
Eam1104I	CTCTTC	6 cut(s)	24, 92, 762, 1386, 1409, 1643
EarI	CTCTTC	6 cut(s)	24, 92, 762, 1386, 1409, 1643
Eco105I	TACGTA	1 cut(s)	1834
Eco47I	GGWCC	2 cut(s)	1501, 1961
Eco81I	CCTNAGG	1 cut(s)	1986
EcoRI	GAATTC	2 cut(s)	58, 500
EcoRII	CCWGG	3 cut(s)	197, 532, 1776
Esp3I	CGTCTC	1 cut(s)	1656
FaeI	CATG	8 cut(s)	134, 626, 661, 1427, 1546, 1847, 1876, 1905
FaqI	GGGAC	2 cut(s)	1514, 1750
FatI	CATG	8 cut(s)	130, 622, 657, 1423, 1542, 1843, 1872, 1901
FbaI	TGATCA	1 cut(s)	1465
FblI	GTMKAC	1 cut(s)	1044
Fnu4HI	GCNGC	4 cut(s)	183, 514, 820, 2064
FokI	GGATG	6 cut(s)	383, 430, 683, 752, 1570, 1770
Fsp4HI	GCNGC	4 cut(s)	183, 514, 820, 2064
FspBI	CTAG	5 cut(s)	416, 698, 1283, 1392, 1772
GluI	GCNGC	4 cut(s)	183, 514, 820, 2064
GsaI	CCCAGC	1 cut(s)	1771
HaeIII	GGCC	1 cut(s)	999
HgaI	GACGC	2 cut(s)	139, 563
Hin1I	GRCGYC	1 cut(s)	150
Hin1II	CATG	8 cut(s)	134, 626, 661, 1427, 1546, 1847, 1876, 1905
HindIII	AAGCTT	1 cut(s)	715
HphI	GGTGA	2 cut(s)	653, 1475
Hpy166II	GTNNAC	5 cut(s)	868, 1045, 1400, 1840, 1961
Hpy8I	GTNNAC	5 cut(s)	868, 1045, 1400, 1840, 1961
Hpy99I	CGWCG	1 cut(s)	177
HpyAV	CCTTC	5 cut(s)	20, 29, 632, 719, 1185
HpyCH4III	ACNGT	7 cut(s)	49, 426, 764, 865, 1351, 1505, 1587
HpyCH4IV	ACGT	6 cut(s)	175, 256, 982, 991, 1833, 1864
HpyF10VI	GCNNNNNNNGC	2 cut(s)	992, 1907
HpyF3I	CTNAG	8 cut(s)	105, 114, 165, 718, 1182, 1719, 1754, 1986
HpySE526I	ACGT	6 cut(s)	175, 256, 982, 991, 1833, 1864
Hsp92I	GRCGYC	1 cut(s)	150
Hsp92II	CATG	8 cut(s)	134, 626, 661, 1427, 1546, 1847, 1876, 1905
Kpn2I	TCCGGA	1 cut(s)	1454
Ksp22I	TGATCA	1 cut(s)	1465
LmnI	GCTCC	5 cut(s)	214, 1177, 1241, 1915, 1972
Lsp1109I	GCAGC	3 cut(s)	169, 500, 2075
LweI	GCATC	8 cut(s)	452, 730, 1054, 1159, 1186, 1213, 1792, 1812
MaeI	CTAG	5 cut(s)	416, 698, 1283, 1392, 1772
MaeII	ACGT	6 cut(s)	175, 256, 982, 991, 1833, 1864
MaeIII	GTNAC	2 cut(s)	134, 1733
MbiI	CCGCTC	1 cut(s)	1956
MfeI	CAATTG	2 cut(s)	1208, 1227
MflI	RGATCY	3 cut(s)	728, 1129, 1451
MlyI	GAGTC	6 cut(s)	213, 334, 602, 1193, 1744, 2059
MmeI	TCCRAC	3 cut(s)	471, 1108, 2033
MroI	TCCGGA	1 cut(s)	1454
MroXI	GAANNNNTTC	2 cut(s)	937, 2076
MseI	TTAA	5 cut(s)	291, 392, 453, 650, 1937
MslI	CAYNNNNRTG	3 cut(s)	129, 627, 1547
MspR9I	CCNGG	6 cut(s)	199, 534, 895, 1011, 1102, 1778
MssI	GTTTAAAC	1 cut(s)	393
MunI	CAATTG	2 cut(s)	1208, 1227
Mva1269I	GAATGC	1 cut(s)	1731
MvaI	CCWGG	3 cut(s)	199, 534, 1778
MwoI	GCNNNNNNNGC	2 cut(s)	992, 1907
NciI	CCSGG	3 cut(s)	895, 1011, 1102
NlaIII	CATG	8 cut(s)	134, 626, 661, 1427, 1546, 1847, 1876, 1905
NlaIV	GGNNCC	5 cut(s)	730, 1453, 1502, 1911, 1968
NmeAIII	GCCGAG	1 cut(s)	1685
NmuCI	GTSAC	1 cut(s)	1733
NspI	RCATGY	2 cut(s)	626, 1546
NspV	TTCGAA	1 cut(s)	1491
PaeI	GCATGC	1 cut(s)	1546
PagI	TCATGA	1 cut(s)	657
PaqCI	CACCTGC	2 cut(s)	1537, 2035
PciI	ACATGT	1 cut(s)	622
PcsI	WCGNNNNNNNCGW	2 cut(s)	988, 997
PctI	GAATGC	1 cut(s)	1731
PdmI	GAANNNNTTC	2 cut(s)	937, 2076
PfeI	GAWTC	4 cut(s)	435, 890, 1433, 1493
PflFI	GACNNNGTC	1 cut(s)	1267
PflMI	CCANNNNNTGG	1 cut(s)	929
PinAI	ACCGGT	2 cut(s)	86, 1325
PkrI	GCNGC	4 cut(s)	184, 515, 821, 2065
PleI	GAGTC	6 cut(s)	212, 333, 601, 1192, 1744, 2058
PmeI	GTTTAAAC	1 cut(s)	393
PpsI	GAGTC	6 cut(s)	212, 333, 601, 1192, 1744, 2058
Ppu21I	YACGTR	1 cut(s)	1834
PscI	ACATGT	1 cut(s)	622
PsiI	TTATAA	2 cut(s)	74, 464
Psp6I	CCWGG	3 cut(s)	197, 532, 1776
PspFI	CCCAGC	1 cut(s)	1767
PspGI	CCWGG	3 cut(s)	197, 532, 1776
PspN4I	GGNNCC	5 cut(s)	730, 1453, 1502, 1911, 1968
PspPI	GGNCC	2 cut(s)	1501, 1961
PsrI	GAACNNNNNNTAC	2 cut(s)	1636, 1668
PstI	CTGCAG	1 cut(s)	2032
PstNI	CAGNNNCTG	1 cut(s)	2036
PsuI	RGATCY	3 cut(s)	728, 1129, 1451
PsyI	GACNNNGTC	1 cut(s)	1267
RsaI	GTAC	8 cut(s)	103, 225, 296, 531, 711, 1507, 1841, 1983
RsaNI	GTAC	8 cut(s)	102, 224, 295, 530, 710, 1506, 1840, 1982
RseI	CAYNNNNRTG	3 cut(s)	129, 627, 1547
SaqAI	TTAA	5 cut(s)	291, 392, 453, 650, 1937
SatI	GCNGC	4 cut(s)	183, 514, 820, 2064
Sau96I	GGNCC	2 cut(s)	1501, 1961
ScaI	AGTACT	1 cut(s)	103
SchI	GAGTC	6 cut(s)	213, 334, 602, 1193, 1744, 2059
ScrFI	CCNGG	6 cut(s)	199, 534, 895, 1011, 1102, 1778
SfaNI	GCATC	8 cut(s)	452, 730, 1054, 1159, 1186, 1213, 1792, 1812
SfcI	CTRYAG	3 cut(s)	1481, 1669, 2028
SfuI	TTCGAA	1 cut(s)	1491
SinI	GGWCC	2 cut(s)	1501, 1961
SmiMI	CAYNNNNRTG	3 cut(s)	129, 627, 1547
SmlI	CTYRAG	2 cut(s)	1151, 1338
SmoI	CTYRAG	2 cut(s)	1151, 1338
SnaBI	TACGTA	1 cut(s)	1834
SphI	GCATGC	1 cut(s)	1546
SsiI	CCGC	3 cut(s)	820, 1876, 1956
SspI	AATATT	2 cut(s)	558, 844
SspMI	CTAG	5 cut(s)	416, 698, 1283, 1392, 1772
StyD4I	CCNGG	6 cut(s)	197, 532, 893, 1009, 1100, 1776
TaaI	ACNGT	7 cut(s)	49, 426, 764, 865, 1351, 1505, 1587
TaiI	ACGT	6 cut(s)	178, 259, 985, 994, 1836, 1867
TaqI	TCGA	6 cut(s)	127, 261, 1158, 1491, 1621, 1929
TatI	WGTACW	1 cut(s)	101
TauI	GCSGC	1 cut(s)	822
TfiI	GAWTC	4 cut(s)	435, 890, 1433, 1493
Tru1I	TTAA	5 cut(s)	291, 392, 453, 650, 1937
Tru9I	TTAA	5 cut(s)	291, 392, 453, 650, 1937
TscAI	CASTG	3 cut(s)	54, 69, 1411
TseFI	GTSAC	1 cut(s)	1733
TseI	GCWGC	3 cut(s)	182, 513, 2063
Tsp45I	GTSAC	1 cut(s)	1733
TspDTI	ATGAA	7 cut(s)	113, 646, 1167, 1207, 1335, 1443, 1861
TspGWI	ACGGA	8 cut(s)	181, 301, 413, 428, 1276, 1830, 1857, 2012
TspRI	CASTG	3 cut(s)	54, 69, 1411
Tth111I	GACNNNGTC	1 cut(s)	1267
Van91I	CCANNNNNTGG	1 cut(s)	929
VpaK11BI	GGWCC	2 cut(s)	1501, 1961
XapI	RAATTY	2 cut(s)	58, 500
XceI	RCATGY	2 cut(s)	626, 1546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1621
XmiI	GTMKAC	1 cut(s)	1044
XmnI	GAANNNNTTC	2 cut(s)	937, 2076
XspI	CTAG	5 cut(s)	416, 698, 1283, 1392, 1772
ZrmI	AGTACT	1 cut(s)	103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.