AT1G41830

Multicopper oxidase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
15603568 .. 15607966
4399 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G41830.1

Sequence Viewer

Length: 1629 bp
ATGATGGCGGTGGGCAGATCCGGAGGCACCATCCTATTGTTCTGCCTATCATTCTTCGCCGCGGTAACCGCGGAGAGTCCATACCGATTCTTTGACTGGAATGTAACATACGGCGACATTTACCCACTCGGTGTTCGTCAGCAGGGAATATTGATTAATGGGCAATTTCCGGGACCAGACATTCACAGTGTGACAAACGACAATCTCATCATTAACGTACACAACAGCTTAGACGAGCCTTTCTTAATCTCATGGAACGGAGTACAAAACAGAAGAAATTCTTATGTTGATGGAATGTACGGAACCACGTGTCCAATTCCACCGAGAAGCAACTACACATACATTTTGCAAGTGAAAGACCAAATTGGAAGTTTCTATTACTTCCCATCTCTTGCCTTTCACAAGGCAGCTGGTGGATTCGGAGGTATCAGAATCCTTAGCCGTCCTGGAATTCCAGTTCCATTTGCTGACCCTGCAGGAGATTACACTGTCCTCATTGGAGATTGGTACAAATTTAATCACACGGATTTGAAGTCTCGTCTTGATAGAGGAAGGAAGTTACCTTCGCCTGATGGTATTCTTATCAATGGCCGAAGTAACGGTGCTACCTTAAACGTTGAACAAGGAAAAACATACCGATTGAGGATATCAAACGTTGGATTACAAGATTCTCTGAACTTCCGAATCCAAAACCACAGAATGAAGCTTGTGGAAGTCGAAGGGACGCACACACTTCAAACCATGTTTTCCTCTCTTGACGTTCACGTTGGCCAGTCTTACTCCGTTCTAATTACTGCTGACCAATCTCCTCGTGACTACTACGTGGTTGTTTCGTCTCGATTCACGGATAAAATCATAACCACCACCGGGGTTCTTCGCTACAGTGGCTCGTCTACCCCTGCTTCTGGTCCTATTCCTGGCGGTCCCACTATTCAGGTTGATTGGTCCTTGAACCAAGCACGTGCCATCAGAACCAATTTGACAGCTAGTGGACCAAGACCAAACCCGCAAGGCTCATACCATTATGGTCTTATACCGCTCATTAGGACAATTGTGTTCGGTAGTTCAGCCGGACAGATAAACGGGAAACAAAGATATGGTGTCAATAGTGTGTCATTTGTGCCAGCTGATACCCCTCTAAAACTGGCTGACTTCTTCAAGATTAGCGGTGTCTATAAGATCAACAGCATCTCAGACAAACCCACATATGGAGGTTTATACCTTGACACCTCAGTTTTGCAAGTCGACTATCGAACCTTTATCGAGATTGTATTCGAGAACCAAGAAGATATCGTCCAAAGTTATCATCTCAATGGTTACTCCTTTTGGGTGGTCGGGATGGATGGTGGACAGTGGAAGACAGGAAGCAGAAATGGTTATAATTTACGCGATGCAGTTTCACGTTCCACAGTCCAAGTGTACCCAAAATCATGGACAGCCATATACATTGCATTAGACAACGTTGGAATGTGGAACTTAAGATCAGAATTTTGGGCAAGACAGTACTTGGGACAACAACTTTACTTACGTGTCTTCACGTCATCTACGTCTTTGAGAGATGAGTACCCTATCCCGAAGAATTCGCGTTTGTGCGGCCGGGCAAGAGGACGACATACTAGGCCTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

542

Amino Acids

60.58

Weight (kDa)

9.47

Isoelectric Point (pI)

34.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 35 - 148 4.3e-36 Multicopper oxidase
Cu-oxidase PF00394 161 - 297 6e-45 Multicopper oxidase
Cu-oxidase_2 PF07731 378 - 514 3.9e-32 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1380
AccB1I GGYRCC 1 cut(s) 26
AccBSI CCGCTC 1 cut(s) 1039
AccI GTMKAC 2 cut(s) 893, 1245
AccII CGCG 4 cut(s) 62, 71, 1389, 1585
AccIII TCCGGA 1 cut(s) 20
AclI AACGTT 3 cut(s) 615, 654, 1461
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 3 cut(s) 589, 769, 1594
AcsI RAATTY 5 cut(s) 277, 450, 512, 1487, 1579
AcvI CACGTG 2 cut(s) 309, 962
AdeI CACNNNGTG 2 cut(s) 131, 190
AfaI GTAC 7 cut(s) 219, 264, 299, 509, 1421, 1505, 1565
AfiI CCNNNNNNNGG 4 cut(s) 867, 905, 917, 1208
AflII CTTAAG 1 cut(s) 1477
AflIII ACRYGT 2 cut(s) 308, 1528
AgsI TTSAA 5 cut(s) 532, 620, 737, 952, 1159
AjiI CACGTC 1 cut(s) 1539
AjnI CCWGG 2 cut(s) 445, 916
AloI GAACNNNNNNTCC 4 cut(s) 295, 327, 441, 473
AluBI AGCT 5 cut(s) 228, 410, 706, 986, 1127
AluI AGCT 5 cut(s) 228, 410, 706, 986, 1127
Alw26I GTCTC 2 cut(s) 540, 840
AlwI GGATC 1 cut(s) 12
Aor13HI TCCGGA 1 cut(s) 20
AoxI GGCC 4 cut(s) 589, 769, 1594, 1619
ApeKI GCWGC 1 cut(s) 407
ApoI RAATTY 5 cut(s) 277, 450, 512, 1487, 1579
AseI ATTAAT 1 cut(s) 156
Asp700I GAANNNNTTC 1 cut(s) 277
AspS9I GGNCC 5 cut(s) 173, 908, 923, 945, 992
AsuC2I CCSGG 3 cut(s) 171, 868, 1598
AvaII GGWCC 5 cut(s) 173, 908, 923, 945, 992
BalI TGGCCA 1 cut(s) 771
BanI GGYRCC 1 cut(s) 26
BauI CACGAG 1 cut(s) 810
BbrPI CACGTG 2 cut(s) 309, 962
BbsI GAAGAC 2 cut(s) 1364, 1525
BbvI GCAGC 1 cut(s) 419
BccI CCATC 7 cut(s) 38, 284, 394, 566, 974, 1333, 1337
BceAI ACGGC 2 cut(s) 127, 426
BciT130I CCWGG 2 cut(s) 447, 918
BcnI CCSGG 3 cut(s) 171, 868, 1598
BcoDI GTCTC 2 cut(s) 540, 840
BfaI CTAG 2 cut(s) 987, 1617
BfmI CTRYAG 2 cut(s) 474, 880
BfrI CTTAAG 1 cut(s) 1477
BisI GCNGC 3 cut(s) 60, 408, 1594
BlsI GCNGC 3 cut(s) 61, 409, 1595
BmcAI AGTACT 1 cut(s) 1505
Bme1390I CCNGG 5 cut(s) 171, 447, 868, 918, 1598
Bme18I GGWCC 5 cut(s) 173, 908, 923, 945, 992
BmgBI CACGTC 1 cut(s) 1539
BmgT120I GGNCC 5 cut(s) 173, 908, 923, 945, 992
BmiI GGNNCC 4 cut(s) 28, 174, 304, 925
BmrFI CCNGG 5 cut(s) 171, 447, 868, 918, 1598
BmsI GCATC 2 cut(s) 1197, 1381
BpiI GAAGAC 2 cut(s) 1364, 1525
Bpu10I CCTNAGC 1 cut(s) 437
BpuMI CCSGG 3 cut(s) 171, 868, 1598
BsaAI YACGTR 4 cut(s) 309, 823, 962, 1529
BsaJI CCNNGG 3 cut(s) 60, 69, 867
BsaWI WCCGGW 1 cut(s) 20
Bsc4I CCNNNNNNNGG 4 cut(s) 867, 905, 917, 1208
Bse1I ACTGG 4 cut(s) 101, 455, 772, 1149
Bse3DI GCAATG 1 cut(s) 1446
BseAI TCCGGA 1 cut(s) 20
BseBI CCWGG 2 cut(s) 447, 918
BseDI CCNNGG 3 cut(s) 60, 69, 867
BseGI GGATG 3 cut(s) 30, 1344, 1348
BseLI CCNNNNNNNGG 4 cut(s) 867, 905, 917, 1208
BseMI GCAATG 1 cut(s) 1446
BseMII CTCAG 2 cut(s) 1206, 1245
BseNI ACTGG 4 cut(s) 101, 455, 772, 1149
BseRI GAGGAG 1 cut(s) 798
BseX3I CGGCCG 1 cut(s) 1594
BseXI GCAGC 1 cut(s) 419
Bsh1236I CGCG 4 cut(s) 62, 71, 1389, 1585
Bsh1285I CGRYCG 1 cut(s) 1597
BshFI GGCC 4 cut(s) 591, 771, 1596, 1621
BshNI GGYRCC 1 cut(s) 26
BsiEI CGRYCG 1 cut(s) 1597
BsiSI CCGG 5 cut(s) 21, 170, 867, 1071, 1597
BslFI GGGAC 4 cut(s) 186, 736, 909, 1524
BslI CCNNNNNNNGG 4 cut(s) 867, 905, 917, 1208
BsmAI GTCTC 2 cut(s) 540, 840
BsmBI CGTCTC 1 cut(s) 840
BsmFI GGGAC 4 cut(s) 186, 736, 909, 1524
BsnI GGCC 4 cut(s) 591, 771, 1596, 1621
Bsp13I TCCGGA 1 cut(s) 20
Bsp143I GATC 3 cut(s) 17, 1179, 1481
BspANI GGCC 4 cut(s) 591, 771, 1596, 1621
BspCNI CTCAG 2 cut(s) 1205, 1244
BspEI TCCGGA 1 cut(s) 20
BspFNI CGCG 4 cut(s) 62, 71, 1389, 1585
BspLI GGNNCC 4 cut(s) 28, 174, 304, 925
BspMAI CTGCAG 1 cut(s) 478
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 26
BspTI CTTAAG 1 cut(s) 1477
BsrBI CCGCTC 1 cut(s) 1039
BsrDI GCAATG 1 cut(s) 1446
BsrI ACTGG 4 cut(s) 101, 455, 772, 1149
BssECI CCNNGG 3 cut(s) 60, 69, 867
BssMI GATC 3 cut(s) 17, 1179, 1481
BssSI CACGAG 1 cut(s) 810
Bst2BI CACGAG 1 cut(s) 810
Bst2UI CCWGG 2 cut(s) 447, 918
Bst4CI ACNGT 7 cut(s) 188, 490, 602, 884, 1353, 1411, 1503
BstAFI CTTAAG 1 cut(s) 1477
BstBAI YACGTR 4 cut(s) 309, 823, 962, 1529
BstC8I GCNNGC 1 cut(s) 1125
BstDEI CTNAG 4 cut(s) 229, 437, 1192, 1231
BstDSI CCRYGG 2 cut(s) 60, 69
BstEII GGTNACC 1 cut(s) 64
BstF5I GGATG 3 cut(s) 30, 1344, 1348
BstFNI CGCG 4 cut(s) 62, 71, 1389, 1585
BstKTI GATC 3 cut(s) 20, 1182, 1484
BstMAI GTCTC 2 cut(s) 540, 840
BstMBI GATC 3 cut(s) 17, 1179, 1481
BstMCI CGRYCG 1 cut(s) 1597
BstMWI GCNNNNNNNGC 3 cut(s) 68, 473, 885
BstNI CCWGG 2 cut(s) 447, 918
BstPI GGTNACC 1 cut(s) 64
BstSCI CCNGG 5 cut(s) 169, 445, 866, 916, 1596
BstSFI CTRYAG 2 cut(s) 474, 880
BstUI CGCG 4 cut(s) 62, 71, 1389, 1585
BstV1I GCAGC 1 cut(s) 419
BstV2I GAAGAC 2 cut(s) 1364, 1525
BstX2I RGATCY 1 cut(s) 17
BstXI CCANNNNNNTGG 1 cut(s) 1431
BstYI RGATCY 1 cut(s) 17
BstZI CGGCCG 1 cut(s) 1594
BsuRI GGCC 4 cut(s) 591, 771, 1596, 1621
BtgI CCRYGG 2 cut(s) 60, 69
BtgZI GCGATG 1 cut(s) 1404
BtrI CACGTC 1 cut(s) 1539
BtsCI GGATG 3 cut(s) 30, 1344, 1348
BtsIMutI CAGTG 4 cut(s) 193, 486, 889, 1358
Cac8I GCNNGC 1 cut(s) 1125
Cfr13I GGNCC 5 cut(s) 173, 908, 923, 945, 992
Cfr42I CCGCGG 2 cut(s) 63, 72
CseI GACGC 1 cut(s) 733
Csp6I GTAC 7 cut(s) 218, 263, 298, 508, 1420, 1504, 1564
CviAII CATG 3 cut(s) 252, 742, 1431
CviQI GTAC 7 cut(s) 218, 263, 298, 508, 1420, 1504, 1564
DdeI CTNAG 4 cut(s) 229, 437, 1192, 1231
DpnI GATC 3 cut(s) 19, 1181, 1483
DpnII GATC 3 cut(s) 17, 1179, 1481
DraIII CACNNNGTG 2 cut(s) 131, 190
EaeI YGGCCR 3 cut(s) 589, 769, 1594
EagI CGGCCG 1 cut(s) 1594
EclXI CGGCCG 1 cut(s) 1594
Eco147I AGGCCT 1 cut(s) 1621
Eco32I GATATC 2 cut(s) 648, 1291
Eco47I GGWCC 5 cut(s) 173, 908, 923, 945, 992
Eco52I CGGCCG 1 cut(s) 1594
Eco72I CACGTG 2 cut(s) 309, 962
Eco91I GGTNACC 1 cut(s) 64
EcoO65I GGTNACC 1 cut(s) 64
EcoRI GAATTC 2 cut(s) 450, 1579
EcoRII CCWGG 2 cut(s) 445, 916
EcoRV GATATC 2 cut(s) 648, 1291
Esp3I CGTCTC 1 cut(s) 840
FaeI CATG 3 cut(s) 255, 745, 1434
FalI AAGNNNNNCTT 2 cut(s) 265, 297
FaqI GGGAC 4 cut(s) 186, 736, 909, 1524
FatI CATG 3 cut(s) 251, 741, 1430
FauI CCCGC 1 cut(s) 1014
FauNDI CATATG 1 cut(s) 1207
FblI GTMKAC 2 cut(s) 893, 1245
Fnu4HI GCNGC 3 cut(s) 60, 408, 1594
FokI GGATG 3 cut(s) 17, 1351, 1355
Fsp4HI GCNGC 3 cut(s) 60, 408, 1594
FspBI CTAG 2 cut(s) 987, 1617
GluI GCNGC 3 cut(s) 60, 408, 1594
HaeIII GGCC 4 cut(s) 591, 771, 1596, 1621
HapII CCGG 5 cut(s) 21, 170, 867, 1071, 1597
HgaI GACGC 1 cut(s) 733
Hin1II CATG 3 cut(s) 255, 745, 1434
HincII GTYRAC 1 cut(s) 1246
HindII GTYRAC 1 cut(s) 1246
HindIII AAGCTT 1 cut(s) 704
HinfI GANTC 7 cut(s) 76, 87, 417, 432, 668, 684, 840
HpaII CCGG 5 cut(s) 21, 170, 867, 1071, 1597
Hpy166II GTNNAC 7 cut(s) 220, 763, 894, 992, 1246, 1349, 1420
Hpy188I TCNGA 7 cut(s) 422, 431, 675, 683, 971, 1195, 1486
Hpy8I GTNNAC 7 cut(s) 220, 763, 894, 992, 1246, 1349, 1420
HpyAV CCTTC 3 cut(s) 546, 573, 713
HpyCH4III ACNGT 7 cut(s) 188, 490, 602, 884, 1353, 1411, 1503
HpyCH4V TGCA 5 cut(s) 349, 476, 1240, 1394, 1451
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 473, 885
HpyF3I CTNAG 4 cut(s) 229, 437, 1192, 1231
Hsp92II CATG 3 cut(s) 255, 745, 1434
Kpn2I TCCGGA 1 cut(s) 20
KspI CCGCGG 2 cut(s) 63, 72
Kzo9I GATC 3 cut(s) 17, 1179, 1481
Lsp1109I GCAGC 1 cut(s) 419
LweI GCATC 2 cut(s) 1197, 1381
MaeI CTAG 2 cut(s) 987, 1617
MaeIII GTNAC 7 cut(s) 64, 103, 190, 558, 596, 812, 1316
MalI GATC 3 cut(s) 19, 1181, 1483
MbiI CCGCTC 1 cut(s) 1039
MboI GATC 3 cut(s) 17, 1179, 1481
MboII GAAGA 8 cut(s) 46, 285, 866, 1147, 1298, 1369, 1525, 1588
MfeI CAATTG 1 cut(s) 1050
MflI RGATCY 1 cut(s) 17
MlsI TGGCCA 1 cut(s) 771
MluNI TGGCCA 1 cut(s) 771
MlyI GAGTC 1 cut(s) 85
MmeI TCCRAC 2 cut(s) 637, 1444
Mox20I TGGCCA 1 cut(s) 771
MroI TCCGGA 1 cut(s) 20
MroXI GAANNNNTTC 1 cut(s) 277
MscI TGGCCA 1 cut(s) 771
MseI TTAA 6 cut(s) 156, 213, 245, 516, 611, 1478
MslI CAYNNNNRTG 1 cut(s) 1311
Msp20I TGGCCA 1 cut(s) 771
MspA1I CMGCKG 4 cut(s) 62, 71, 410, 1127
MspCI CTTAAG 1 cut(s) 1477
MspI CCGG 5 cut(s) 21, 170, 867, 1071, 1597
MspR9I CCNGG 5 cut(s) 171, 447, 868, 918, 1598
MunI CAATTG 1 cut(s) 1050
MvaI CCWGG 2 cut(s) 447, 918
MvnI CGCG 4 cut(s) 62, 71, 1389, 1585
MwoI GCNNNNNNNGC 3 cut(s) 68, 473, 885
NciI CCSGG 3 cut(s) 171, 868, 1598
NdeI CATATG 1 cut(s) 1207
NdeII GATC 3 cut(s) 17, 1179, 1481
NlaIII CATG 3 cut(s) 255, 745, 1434
NlaIV GGNNCC 4 cut(s) 28, 174, 304, 925
NmuCI GTSAC 2 cut(s) 190, 812
PceI AGGCCT 1 cut(s) 1621
PcsI WCGNNNNNNNCGW 1 cut(s) 1544
PdmI GAANNNNTTC 1 cut(s) 277
PfeI GAWTC 6 cut(s) 87, 417, 432, 668, 684, 840
PfoI TCCNGGA 2 cut(s) 169, 445
PkrI GCNGC 3 cut(s) 61, 409, 1595
PleI GAGTC 1 cut(s) 84
PmaCI CACGTG 2 cut(s) 309, 962
PmlI CACGTG 2 cut(s) 309, 962
PpsI GAGTC 1 cut(s) 84
Ppu21I YACGTR 4 cut(s) 309, 823, 962, 1529
PshBI ATTAAT 1 cut(s) 156
PsiI TTATAA 1 cut(s) 1380
Psp1406I AACGTT 3 cut(s) 615, 654, 1461
Psp6I CCWGG 2 cut(s) 445, 916
PspCI CACGTG 2 cut(s) 309, 962
PspEI GGTNACC 1 cut(s) 64
PspGI CCWGG 2 cut(s) 445, 916
PspN4I GGNNCC 4 cut(s) 28, 174, 304, 925
PspPI GGNCC 5 cut(s) 173, 908, 923, 945, 992
PstI CTGCAG 1 cut(s) 478
PsuI RGATCY 1 cut(s) 17
PvuII CAGCTG 2 cut(s) 410, 1127
RsaI GTAC 7 cut(s) 219, 264, 299, 509, 1421, 1505, 1565
RsaNI GTAC 7 cut(s) 218, 263, 298, 508, 1420, 1504, 1564
RseI CAYNNNNRTG 1 cut(s) 1311
SacII CCGCGG 2 cut(s) 63, 72
SalI GTCGAC 1 cut(s) 1244
SaqAI TTAA 6 cut(s) 156, 213, 245, 516, 611, 1478
SatI GCNGC 3 cut(s) 60, 408, 1594
Sau3AI GATC 3 cut(s) 17, 1179, 1481
Sau96I GGNCC 5 cut(s) 173, 908, 923, 945, 992
SbfI CCTGCAGG 1 cut(s) 478
ScaI AGTACT 1 cut(s) 1505
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 5 cut(s) 171, 447, 868, 918, 1598
SdaI CCTGCAGG 1 cut(s) 478
SfaNI GCATC 2 cut(s) 1197, 1381
SfcI CTRYAG 2 cut(s) 474, 880
Sfr303I CCGCGG 2 cut(s) 63, 72
SgrBI CCGCGG 2 cut(s) 63, 72
SinI GGWCC 5 cut(s) 173, 908, 923, 945, 992
SmiMI CAYNNNNRTG 1 cut(s) 1311
SmlI CTYRAG 1 cut(s) 1477
SmoI CTYRAG 1 cut(s) 1477
Sse8387I CCTGCAGG 1 cut(s) 478
SseBI AGGCCT 1 cut(s) 1621
SspI AATATT 1 cut(s) 150
SspMI CTAG 2 cut(s) 987, 1617
StuI AGGCCT 1 cut(s) 1621
StyD4I CCNGG 5 cut(s) 169, 445, 866, 916, 1596
TaaI ACNGT 7 cut(s) 188, 490, 602, 884, 1353, 1411, 1503
TaqI TCGA 6 cut(s) 717, 838, 1245, 1252, 1263, 1275
TatI WGTACW 2 cut(s) 262, 1503
TauI GCSGC 2 cut(s) 62, 1596
TfiI GAWTC 6 cut(s) 87, 417, 432, 668, 684, 840
Tru1I TTAA 6 cut(s) 156, 213, 245, 516, 611, 1478
Tru9I TTAA 6 cut(s) 156, 213, 245, 516, 611, 1478
TscAI CASTG 4 cut(s) 193, 493, 889, 1358
TseFI GTSAC 2 cut(s) 190, 812
TseI GCWGC 1 cut(s) 407
Tsp45I GTSAC 2 cut(s) 190, 812
TspDTI ATGAA 1 cut(s) 716
TspGWI ACGGA 5 cut(s) 273, 315, 539, 772, 860
TspRI CASTG 4 cut(s) 193, 493, 889, 1358
Vha464I CTTAAG 1 cut(s) 1477
VpaK11BI GGWCC 5 cut(s) 173, 908, 923, 945, 992
VspI ATTAAT 1 cut(s) 156
XapI RAATTY 5 cut(s) 277, 450, 512, 1487, 1579
XmiI GTMKAC 2 cut(s) 893, 1245
XmnI GAANNNNTTC 1 cut(s) 277
XspI CTAG 2 cut(s) 987, 1617
ZrmI AGTACT 1 cut(s) 1505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.