Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009297

Physical Location & Seq

Genomic Coordinates Forward (+)

20061405 .. 20065713

Gene Structure 4309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G53730.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGAGGGAGAATTGGGCGGTGGTGGCTCTGTTTACACTATGCATTGTAGGGTTTGAGCTTAGATTCATCCATGGAGCTACTGATGCATCAGACACTTCAGCATTGAACACATTGTTCAGTGGTATGCATTCTCCAGCTCAGCTAACACAATGGACTGCAGCAGCTGGTGATCCTTGTGGCCAGAATTGGAGAGGCGTCACTTGTTCCGGCTCACGAGTTACTCAAATAAAGTTGTCAGGTCTTGAGCTCTCTGGAACTCTTGGAGGATACATGCTTGATAAATTGACTTCTCTTACCGAGCTTGATCTAAGCAGCAATAATCTTGGAGGTGATTTACCATATCAGTTTCCTCCAAATCTGCAACGATTGAACCTTGCGAATAATCAATTCACTGGAGCTGCTTCGTACTCACTTTCTCAGATTACACCACTTAAGTATCTCAATCTTGGTCACAATCAGTTTAAGGGGCAGATAGCTATCGACTTCTCCAAGCTCGACTCTCTCACAACCTTGGACTTCTCTTTCAATTCTTTCACGAACTCTTTACCGGCAACGTTTTCCTCTCTAACAAGTTTAAAATCACTATACCTTCAGAACAATCAGTTCTCAGGCACAGTCGATGTCTTAGCCGGTCTTCCTCTTGAGACTCTGAACATTGCGAACAATGACTTCACGGGGTGGATCCCCAGTTCTTTAAAGGGCATCACATTAATAAAAGATGGCAACTCATTCAATACTGGACCTGCACCTCCACCACCACCTGGTACACCTCCTATCCGTGGCTCCCCGAGCCGTAAATCTGGAGGACGTGAAAGCCGGTCTAGTGATGAGTCCACCAGAAATGGAGATTCCAAGAAATCAGGAATCGGAGCGGGGGCAATTGCGGGCATAATCATTTCATTGTTAGTAGTTACAGCTCTTCTTGTTGCTTTCTTCTTGTTCAGAAGAAAAAAATCAAAGAGGTCATCACCCATGGACATTGAGAAAACCGATAACCAGCCTTTCACTCTTGCTTCAAACGACTTTCACGAAAACAATTCCATTCAGAGTTCTTCATCAGTTGAGACAAAGAAACTGGACACTTCATTGTCTATTAATCTTCGACCTCCACCAATTGATAGAAACAAATCATTTGATGATGAAGATTCGACAAGAAAGCCTATTGCTGTCAAGAAATCCACAGTGGTGGTTCCTTCAAATGTGAGACTCTATTCAGTTGCAGATCTCCAAATTGCTACTGGCAGTTTCAGCGTAGATAATCTTCTTGGAGAAGGGACTTTTGGACGAGTATACAGAGCTGAGTTTGATGATGGAAAGGTTCTTGCTGTGAAGAAAATTGATTCGTCTGCTCTCCCACATGGCATGACCGATGATTTCATTGAAATGGTATCGAAAATAGCCAATTTGGATCATCCAAATGTGACCAAGCTTGTTGGTTACTGTGCTGAGCACGGACAACATCTCGTGGTCTATGAATTCCACAAAAATGGATCATTACATGACTTCTTACACTTATCAGAAGAGGAAAGTAAAGCATTGGTGTGGAATTCACGAGTCAAGATCGCTCTTGGGACTGCACGCGCATTGGAGTATCTGCATGAAGTTTGCTCACCGTCTATAGTGGACAAGAATATCAAATCAGCTAATATTTTACTCGATTCAGAGCTGAATCCTCACTTATCAGATTCTGGTCTCGCAAGCTTCCTTCCCACAGCTAATGAGTTATTAAACCAAACCGATGAAGGGTATAGCGCACCTGAAGTATCAATGTCAGGCCAATATTCTTTGAAGAGTGACATTTACAGTTTTGGAGTAGTGATGCTTGAACTTTTAACTGGGAGAAAACCATTTGACAGCACAAGGTCAAGATCTGAGCAGTCACTGGTTCGATGGGCGACACCACAACTTCACGACATTGATGCTTTAGCCAAAATGGTTGATCCAGCTCTTAAAGGGCTTTATCCTGTCAAATCCCTTTCTCGATTTGCAGATGTTATCGCTCTCTGTGTCCAGCCGGAGCCGGAGTTTAGACCACCAATGTCTGAAGTTGTGCAGGCTCTAGTTGTGTTAGTGCAGAGAGCTAACATGAGCAAGAGAACTGTCGGAGTTGATCCATCGCAACGTGCTGGTAGTGCCGACACGACCAGTGATTACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

719

Amino Acids

78.08

Weight (kDa)

6.1

Isoelectric Point (pI)

37.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 69	2.3e-08	Leucine rich repeat N-terminal domain
LRR_8	PF13855	97 - 154	5.4e-07	Leucine rich repeat
LRR_8	PF13855	118 - 177	1.4e-07	Leucine rich repeat
LRR_8	PF13855	162 - 202	6.4e-06	Leucine rich repeat
LRR_4	PF12799	167 - 205	5.3e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	417 - 686	1.5e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	418 - 688	7e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009297)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53730 AT1G53730 AT3G14350 AT3G14350 AT3G14350
fragaria_vesca	FvH4_6g36180 FvH4_6g36180
malus_domestica	MD09G1171600.v1.1 MD17G1155400.v1.1
prunus_persica	Prupe.3G030000_v2.0.a1
pyrus_communis	pycom09g08890 pycom17g14820
rosa_chinensis	RchiOBHm_Chr2g0148161
rosa_laevigata	RLG00000020322
rosa_multiflora	Rmu_sc0001516.1_g000101
rosa_roxburghii	Rroxscaffold_2G00099030
rosa_rugosa	Rorug02G0404100
rosa_samantha	Rh2AG462700 Rh2BG475700 Rh2CG449500 Rh2DG484400
rosa_wichuraiana	Rw2G037720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	751
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccBSI	CCGCTC	1 cut(s)	872
AccI	GTMKAC	1 cut(s)	1290
AccII	CGCG	1 cut(s)	1581
AciI	CCGC	3 cut(s)	17, 872, 884
AclI	AACGTT	1 cut(s)	554
AclWI	GGATC	7 cut(s)	164, 676, 689, 1416, 1498, 1934, 2105
AcoI	YGGCCR	1 cut(s)	178
AcsI	RAATTY	2 cut(s)	1475, 1546
AcuI	CTGAAG	4 cut(s)	81, 575, 1779, 2064
AcyI	GRCGYC	1 cut(s)	195
AdeI	CACNNNGTG	1 cut(s)	678
AfaI	GTAC	2 cut(s)	407, 766
AfiI	CCNNNNNNNGG	3 cut(s)	761, 779, 1743
AflII	CTTAAG	1 cut(s)	431
AflIII	ACRYGT	1 cut(s)	2154
AgsI	TTSAA	9 cut(s)	106, 370, 526, 733, 1017, 1197, 1382, 1789, 1826
AjiI	CACGTC	1 cut(s)	809
AjnI	CCWGG	1 cut(s)	760
AjuI	GAANNNNNNNTTGG	2 cut(s)	1263, 1295
AleI	CACNNNNGTG	1 cut(s)	1184
AloI	GAACNNNNNNTCC	2 cut(s)	673, 705
Alw21I	GWGCWC	2 cut(s)	249, 1452
Alw26I	GTCTC	4 cut(s)	638, 1058, 1198, 1697
AlwI	GGATC	7 cut(s)	164, 676, 689, 1416, 1498, 1934, 2105
AlwNI	CAGNNNCTG	3 cut(s)	164, 1688, 1882
Ama87I	CYCGRG	1 cut(s)	787
AoxI	GGCC	2 cut(s)	178, 1774
ApeKI	GCWGC	4 cut(s)	158, 161, 312, 398
ApoI	RAATTY	2 cut(s)	1475, 1546
AseI	ATTAAT	2 cut(s)	710, 1095
AspLEI	GCGC	2 cut(s)	1583, 1754
AspS9I	GGNCC	1 cut(s)	740
AsuHPI	GGTGA	4 cut(s)	179, 341, 960, 1602
AvaI	CYCGRG	1 cut(s)	787
AvaII	GGWCC	1 cut(s)	740
BaeI	ACNNNNGTAYC	2 cut(s)	419, 452
BalI	TGGCCA	1 cut(s)	180
BamHI	GGATCC	1 cut(s)	681
BanII	GRGCYC	1 cut(s)	249
BarI	GAAGNNNNNNTAC	2 cut(s)	1245, 1277
BauI	CACGAG	3 cut(s)	213, 1463, 1551
BbsI	GAAGAC	1 cut(s)	626
Bbv12I	GWGCWC	2 cut(s)	249, 1452
BbvI	GCAGC	4 cut(s)	170, 173, 324, 385
BccI	CCATC	4 cut(s)	713, 1304, 1884, 2122
BceAI	ACGGC	1 cut(s)	777
BcgI	CGANNNNNNTGC	2 cut(s)	1901, 1935
BciT130I	CCWGG	1 cut(s)	762
BciVI	GTATCC	1 cut(s)	260
BcoDI	GTCTC	4 cut(s)	638, 1058, 1198, 1697
BfaI	CTAG	2 cut(s)	822, 2060
BfmI	CTRYAG	2 cut(s)	156, 1617
BfrI	CTTAAG	1 cut(s)	431
BfuAI	ACCTGC	1 cut(s)	751
BfuI	GTATCC	1 cut(s)	260
BglII	AGATCT	2 cut(s)	1222, 1868
BisI	GCNGC	4 cut(s)	159, 162, 313, 399
BlpI	GCTNAGC	2 cut(s)	138, 1446
BlsI	GCNGC	4 cut(s)	160, 163, 314, 400
Bme1390I	CCNGG	1 cut(s)	762
Bme18I	GGWCC	1 cut(s)	740
BmeT110I	CYCGRG	1 cut(s)	787
BmgBI	CACGTC	1 cut(s)	809
BmgT120I	GGNCC	1 cut(s)	740
BmiI	GGNNCC	4 cut(s)	683, 784, 1191, 2019
BmrFI	CCNGG	1 cut(s)	762
BmrI	ACTGGG	2 cut(s)	681, 1845
BmsI	GCATC	5 cut(s)	73, 95, 711, 1809, 1909
BmuI	ACTGGG	2 cut(s)	681, 1845
BpiI	GAAGAC	1 cut(s)	626
BpmI	CTGGAG	3 cut(s)	117, 414, 822
Bpu1102I	GCTNAGC	2 cut(s)	138, 1446
BpuEI	CTTGAG	2 cut(s)	263, 662
BsaBI	GATNNNNATC	1 cut(s)	476
BsaHI	GRCGYC	1 cut(s)	195
BsaI	GGTCTC	1 cut(s)	1697
BsaJI	CCNNGG	4 cut(s)	70, 510, 778, 972
BsaXI	ACNNNNNCTCC	2 cut(s)	2009, 2039
Bsc4I	CCNNNNNNNGG	3 cut(s)	761, 779, 1743
Bse118I	RCCGGY	3 cut(s)	547, 629, 816
Bse1I	ACTGG	8 cut(s)	397, 687, 742, 1080, 1243, 1840, 1887, 2145
Bse3DI	GCAATG	1 cut(s)	654
Bse8I	GATNNNNATC	1 cut(s)	476
BseBI	CCWGG	1 cut(s)	762
BseDI	CCNNGG	4 cut(s)	70, 510, 778, 972
BseGI	GGATG	2 cut(s)	66, 1411
BseJI	GATNNNNATC	1 cut(s)	476
BseLI	CCNNNNNNNGG	3 cut(s)	761, 779, 1743
BseMI	GCAATG	1 cut(s)	654
BseMII	CTCAG	6 cut(s)	152, 431, 621, 1290, 1437, 1863
BseNI	ACTGG	8 cut(s)	397, 687, 742, 1080, 1243, 1840, 1887, 2145
BseXI	GCAGC	4 cut(s)	170, 173, 324, 385
BsgI	GTGCAG	4 cut(s)	729, 1560, 2072, 2093
Bsh1236I	CGCG	1 cut(s)	1581
BshFI	GGCC	2 cut(s)	180, 1776
BsiHKAI	GWGCWC	2 cut(s)	249, 1452
BsiHKCI	CYCGRG	1 cut(s)	787
BsiSI	CCGG	6 cut(s)	207, 548, 630, 817, 2015, 2021
BslFI	GGGAC	2 cut(s)	1288, 1585
BslI	CCNNNNNNNGG	3 cut(s)	761, 779, 1743
BsmAI	GTCTC	4 cut(s)	638, 1058, 1198, 1697
BsmFI	GGGAC	2 cut(s)	1288, 1585
BsmI	GAATGC	1 cut(s)	127
BsnI	GGCC	2 cut(s)	180, 1776
Bso31I	GGTCTC	1 cut(s)	1697
BsoBI	CYCGRG	1 cut(s)	787
Bsp1286I	GDGCHC	2 cut(s)	249, 1452
Bsp1720I	GCTNAGC	2 cut(s)	138, 1446
Bsp19I	CCATGG	2 cut(s)	70, 972
BspACI	CCGC	3 cut(s)	17, 872, 884
BspANI	GGCC	2 cut(s)	180, 1776
BspCNI	CTCAG	6 cut(s)	151, 430, 620, 1291, 1438, 1864
BspFNI	CGCG	1 cut(s)	1581
BspLI	GGNNCC	4 cut(s)	683, 784, 1191, 2019
BspMAI	CTGCAG	1 cut(s)	160
BspMI	ACCTGC	1 cut(s)	751
BspPI	GGATC	7 cut(s)	164, 676, 689, 1416, 1498, 1934, 2105
BspQI	GCTCTTC	1 cut(s)	924
BspTI	CTTAAG	1 cut(s)	431
BspTNI	GGTCTC	1 cut(s)	1697
BsrBI	CCGCTC	1 cut(s)	872
BsrDI	GCAATG	1 cut(s)	654
BsrFI	RCCGGY	3 cut(s)	547, 629, 816
BsrI	ACTGG	8 cut(s)	397, 687, 742, 1080, 1243, 1840, 1887, 2145
BssAI	RCCGGY	3 cut(s)	547, 629, 816
BssECI	CCNNGG	4 cut(s)	70, 510, 778, 972
BssNAI	GTATAC	1 cut(s)	1291
BssNI	GRCGYC	1 cut(s)	195
BssSI	CACGAG	3 cut(s)	213, 1463, 1551
BssT1I	CCWWGG	3 cut(s)	70, 510, 972
Bst1107I	GTATAC	1 cut(s)	1291
Bst2BI	CACGAG	3 cut(s)	213, 1463, 1551
Bst2UI	CCWGG	1 cut(s)	762
Bst4CI	ACNGT	6 cut(s)	616, 1183, 1442, 1614, 1805, 2101
Bst6I	CTCTTC	3 cut(s)	924, 1515, 1784
BstACI	GRCGYC	1 cut(s)	195
BstAFI	CTTAAG	1 cut(s)	431
BstC8I	GCNNGC	4 cut(s)	886, 1579, 1699, 2055
BstDEI	CTNAG	9 cut(s)	59, 138, 308, 417, 607, 625, 1299, 1446, 1872
BstDSI	CCRYGG	3 cut(s)	70, 778, 972
BstF5I	GGATG	2 cut(s)	66, 1411
BstFNI	CGCG	1 cut(s)	1581
BstHHI	GCGC	2 cut(s)	1583, 1754
BstMAI	GTCTC	4 cut(s)	638, 1058, 1198, 1697
BstMWI	GCNNNNNNNGC	5 cut(s)	23, 83, 789, 1248, 2132
BstNI	CCWGG	1 cut(s)	762
BstNSI	RCATGY	2 cut(s)	274, 2158
BstSCI	CCNGG	1 cut(s)	760
BstSFI	CTRYAG	2 cut(s)	156, 1617
BstUI	CGCG	1 cut(s)	1581
BstV1I	GCAGC	4 cut(s)	170, 173, 324, 385
BstV2I	GAAGAC	1 cut(s)	626
BstX2I	RGATCY	3 cut(s)	681, 1222, 1868
BstXI	CCANNNNNNTGG	2 cut(s)	1186, 1487
BstYI	RGATCY	3 cut(s)	681, 1222, 1868
BstZ17I	GTATAC	1 cut(s)	1291
BsuI	GTATCC	1 cut(s)	260
BsuRI	GGCC	2 cut(s)	180, 1776
BtgI	CCRYGG	3 cut(s)	70, 778, 972
BtgZI	GCGATG	1 cut(s)	2100
BtrI	CACGTC	1 cut(s)	809
BtsCI	GGATG	2 cut(s)	66, 1411
BtsIMutI	CAGTG	5 cut(s)	124, 390, 1188, 1880, 2152
BveI	ACCTGC	1 cut(s)	751
Cac8I	GCNNGC	4 cut(s)	886, 1579, 1699, 2055
CaiI	CAGNNNCTG	3 cut(s)	164, 1688, 1882
CfoI	GCGC	2 cut(s)	1583, 1754
Cfr10I	RCCGGY	3 cut(s)	547, 629, 816
Cfr13I	GGNCC	1 cut(s)	740
CseI	GACGC	1 cut(s)	184
CsiI	ACCWGGT	1 cut(s)	760
Csp6I	GTAC	2 cut(s)	406, 765
CviAII	CATG	9 cut(s)	71, 271, 973, 1358, 1363, 1499, 1598, 2086, 2155
CviQI	GTAC	2 cut(s)	406, 765
DdeI	CTNAG	9 cut(s)	59, 138, 308, 417, 607, 625, 1299, 1446, 1872
DraI	TTTAAA	2 cut(s)	576, 696
DraIII	CACNNNGTG	1 cut(s)	678
EaeI	YGGCCR	1 cut(s)	178
Eam1104I	CTCTTC	3 cut(s)	924, 1515, 1784
EarI	CTCTTC	3 cut(s)	924, 1515, 1784
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	3 cut(s)	70, 510, 972
Eco24I	GRGCYC	1 cut(s)	249
Eco31I	GGTCTC	1 cut(s)	1697
Eco47I	GGWCC	1 cut(s)	740
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	4 cut(s)	81, 575, 1779, 2064
Eco88I	CYCGRG	1 cut(s)	787
EcoICRI	GAGCTC	1 cut(s)	247
EcoRI	GAATTC	2 cut(s)	1475, 1546
EcoRII	CCWGG	1 cut(s)	760
EcoT14I	CCWWGG	3 cut(s)	70, 510, 972
EcoT22I	ATGCAT	3 cut(s)	44, 88, 129
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	3 cut(s)	70, 510, 972
FaeI	CATG	9 cut(s)	74, 274, 976, 1361, 1366, 1502, 1601, 2089, 2158
FaqI	GGGAC	2 cut(s)	1288, 1585
FatI	CATG	9 cut(s)	70, 270, 972, 1357, 1362, 1498, 1597, 2085, 2154
FauI	CCCGC	2 cut(s)	865, 877
FblI	GTMKAC	1 cut(s)	1290
Fnu4HI	GCNGC	4 cut(s)	159, 162, 313, 399
FokI	GGATG	2 cut(s)	53, 1398
FriOI	GRGCYC	1 cut(s)	249
Fsp4HI	GCNGC	4 cut(s)	159, 162, 313, 399
FspBI	CTAG	2 cut(s)	822, 2060
GlaI	GCGC	2 cut(s)	1582, 1753
GluI	GCNGC	4 cut(s)	159, 162, 313, 399
GsuI	CTGGAG	3 cut(s)	117, 414, 822
HaeIII	GGCC	2 cut(s)	180, 1776
HapII	CCGG	6 cut(s)	207, 548, 630, 817, 2015, 2021
HgaI	GACGC	1 cut(s)	184
HhaI	GCGC	2 cut(s)	1583, 1754
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	9 cut(s)	74, 274, 976, 1361, 1366, 1502, 1601, 2089, 2158
Hin6I	GCGC	2 cut(s)	1581, 1752
HinP1I	GCGC	2 cut(s)	1581, 1752
HindIII	AAGCTT	2 cut(s)	1427, 1699
HpaII	CCGG	6 cut(s)	207, 548, 630, 817, 2015, 2021
HphI	GGTGA	4 cut(s)	179, 341, 960, 1602
Hpy166II	GTNNAC	5 cut(s)	33, 767, 834, 1291, 1624
Hpy8I	GTNNAC	5 cut(s)	33, 767, 834, 1291, 1624
HpyAV	CCTTC	5 cut(s)	599, 1203, 1265, 1715, 1736
HpyCH4III	ACNGT	6 cut(s)	616, 1183, 1442, 1614, 1805, 2101
HpyCH4IV	ACGT	3 cut(s)	554, 808, 2122
HpyF10VI	GCNNNNNNNGC	5 cut(s)	23, 83, 789, 1248, 2132
HpyF3I	CTNAG	9 cut(s)	59, 138, 308, 417, 607, 625, 1299, 1446, 1872
HpySE526I	ACGT	3 cut(s)	554, 808, 2122
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	9 cut(s)	74, 274, 976, 1361, 1366, 1502, 1601, 2089, 2158
HspAI	GCGC	2 cut(s)	1581, 1752
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	5 cut(s)	74, 395, 788, 869, 2017
Lsp1109I	GCAGC	4 cut(s)	170, 173, 324, 385
LweI	GCATC	5 cut(s)	73, 95, 711, 1809, 1909
MabI	ACCWGGT	1 cut(s)	760
MaeI	CTAG	2 cut(s)	822, 2060
MaeII	ACGT	3 cut(s)	554, 808, 2122
MaeIII	GTNAC	8 cut(s)	196, 217, 449, 910, 1420, 1436, 1793, 1878
MbiI	CCGCTC	1 cut(s)	872
MfeI	CAATTG	2 cut(s)	879, 1113
MflI	RGATCY	3 cut(s)	681, 1222, 1868
MhlI	GDGCHC	2 cut(s)	249, 1452
MlsI	TGGCCA	1 cut(s)	180
MluNI	TGGCCA	1 cut(s)	180
MlyI	GAGTC	5 cut(s)	491, 640, 839, 1200, 1563
MmeI	TCCRAC	1 cut(s)	2083
Mox20I	TGGCCA	1 cut(s)	180
Mph1103I	ATGCAT	3 cut(s)	44, 88, 129
MscI	TGGCCA	1 cut(s)	180
MseI	TTAA	9 cut(s)	432, 462, 575, 695, 710, 1095, 1727, 1832, 1950
MslI	CAYNNNNRTG	5 cut(s)	1184, 1382, 1416, 1485, 1540
Msp20I	TGGCCA	1 cut(s)	180
MspA1I	CMGCKG	1 cut(s)	164
MspCI	CTTAAG	1 cut(s)	431
MspI	CCGG	6 cut(s)	207, 548, 630, 817, 2015, 2021
MspR9I	CCNGG	1 cut(s)	762
MunI	CAATTG	2 cut(s)	879, 1113
Mva1269I	GAATGC	1 cut(s)	127
MvaI	CCWGG	1 cut(s)	762
MvnI	CGCG	1 cut(s)	1581
MwoI	GCNNNNNNNGC	5 cut(s)	23, 83, 789, 1248, 2132
NcoI	CCATGG	2 cut(s)	70, 972
NlaIII	CATG	9 cut(s)	74, 274, 976, 1361, 1366, 1502, 1601, 2089, 2158
NlaIV	GGNNCC	4 cut(s)	683, 784, 1191, 2019
NmuCI	GTSAC	5 cut(s)	196, 449, 1420, 1793, 1878
NsiI	ATGCAT	3 cut(s)	44, 88, 129
NspI	RCATGY	2 cut(s)	274, 2158
OliI	CACNNNNGTG	1 cut(s)	1184
PciI	ACATGT	1 cut(s)	2154
PciSI	GCTCTTC	1 cut(s)	924
PcsI	WCGNNNNNNNCGW	1 cut(s)	1026
PctI	GAATGC	1 cut(s)	127
PfeI	GAWTC	8 cut(s)	63, 848, 864, 1145, 1340, 1658, 1669, 1685
PflMI	CCANNNNNTGG	1 cut(s)	761
PkrI	GCNGC	4 cut(s)	160, 163, 314, 400
PleI	GAGTC	5 cut(s)	491, 640, 838, 1200, 1562
PpsI	GAGTC	5 cut(s)	491, 640, 838, 1200, 1562
PscI	ACATGT	1 cut(s)	2154
PshBI	ATTAAT	2 cut(s)	710, 1095
Psp124BI	GAGCTC	1 cut(s)	249
Psp1406I	AACGTT	1 cut(s)	554
Psp6I	CCWGG	1 cut(s)	760
PspGI	CCWGG	1 cut(s)	760
PspN4I	GGNNCC	4 cut(s)	683, 784, 1191, 2019
PspPI	GGNCC	1 cut(s)	740
PstI	CTGCAG	1 cut(s)	160
PstNI	CAGNNNCTG	3 cut(s)	164, 1688, 1882
PsuI	RGATCY	3 cut(s)	681, 1222, 1868
PvuII	CAGCTG	1 cut(s)	164
RsaI	GTAC	2 cut(s)	407, 766
RsaNI	GTAC	2 cut(s)	406, 765
RseI	CAYNNNNRTG	5 cut(s)	1184, 1382, 1416, 1485, 1540
SacI	GAGCTC	1 cut(s)	249
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	9 cut(s)	432, 462, 575, 695, 710, 1095, 1727, 1832, 1950
SatI	GCNGC	4 cut(s)	159, 162, 313, 399
Sau96I	GGNCC	1 cut(s)	740
SchI	GAGTC	5 cut(s)	491, 640, 839, 1200, 1563
ScrFI	CCNGG	1 cut(s)	762
SduI	GDGCHC	2 cut(s)	249, 1452
SexAI	ACCWGGT	1 cut(s)	760
SfaNI	GCATC	5 cut(s)	73, 95, 711, 1809, 1909
SfcI	CTRYAG	2 cut(s)	156, 1617
SinI	GGWCC	1 cut(s)	740
SmiMI	CAYNNNNRTG	5 cut(s)	1184, 1382, 1416, 1485, 1540
SmlI	CTYRAG	3 cut(s)	242, 431, 641
SmoI	CTYRAG	3 cut(s)	242, 431, 641
SsiI	CCGC	3 cut(s)	17, 872, 884
SspI	AATATT	2 cut(s)	1648, 1781
SspMI	CTAG	2 cut(s)	822, 2060
SstI	GAGCTC	1 cut(s)	249
StyD4I	CCNGG	1 cut(s)	760
StyI	CCWWGG	3 cut(s)	70, 510, 972
TaaI	ACNGT	6 cut(s)	616, 1183, 1442, 1614, 1805, 2101
TaiI	ACGT	3 cut(s)	557, 811, 2125
TaqI	TCGA	9 cut(s)	480, 495, 618, 1102, 1148, 1391, 1656, 1888, 1981
TaqII	GACCGA	1 cut(s)	1382
TfiI	GAWTC	8 cut(s)	63, 848, 864, 1145, 1340, 1658, 1669, 1685
Tru1I	TTAA	9 cut(s)	432, 462, 575, 695, 710, 1095, 1727, 1832, 1950
Tru9I	TTAA	9 cut(s)	432, 462, 575, 695, 710, 1095, 1727, 1832, 1950
TscAI	CASTG	5 cut(s)	124, 397, 1188, 1887, 2152
TseFI	GTSAC	5 cut(s)	196, 449, 1420, 1793, 1878
TseI	GCWGC	4 cut(s)	158, 161, 312, 398
Tsp45I	GTSAC	5 cut(s)	196, 449, 1420, 1793, 1878
TspDTI	ATGAA	9 cut(s)	55, 888, 1044, 1074, 1155, 1366, 1488, 1614, 1755
TspGWI	ACGGA	2 cut(s)	767, 1467
TspRI	CASTG	5 cut(s)	124, 397, 1188, 1887, 2152
Van91I	CCANNNNNTGG	1 cut(s)	761
Vha464I	CTTAAG	1 cut(s)	431
VpaK11BI	GGWCC	1 cut(s)	740
VspI	ATTAAT	2 cut(s)	710, 1095
XapI	RAATTY	2 cut(s)	1475, 1546
XceI	RCATGY	2 cut(s)	274, 2158
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1235
XmiI	GTMKAC	1 cut(s)	1290
XspI	CTAG	2 cut(s)	822, 2060
Zsp2I	ATGCAT	3 cut(s)	44, 88, 129

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.