Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011226

Physical Location & Seq

Genomic Coordinates Forward (+)

20554352 .. 20558529

Gene Structure 4178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G55090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGAGGCTGTTGAAGGTTGCTACGTGTAACTTGAACCAATGGGCCATGGATTTCGAGAGCAACATGAAGAACATCAAGGCTTCGATCGCTGAGGCAAAGGCTGCTGGTGCTGTTATCAGGCTTGGACCCGAGCTCGAGGTCACTGGCTATGGTTGCGAGGATCACTTCTTGGAACTCGACACTGTCACTCATGCGTGGGAGTGTTTGAAGGAATTGCTGCTTGGTGATTGGACGGATGATATTTTGTGCAGCATAGGAATGCCTGTGATTAAAGGAGCAGAGCGTTATAACTGCCAGGTTCTCTGTATGAACAGAAGAATCATCATGATTCGACCGAAAATGTGGCTCGCAAACGATGGAAACTATAGGGAGCTACGGTGGTTCACAGCTTGGAAGCAGAGAGAAGAGCTAGAGGAATTTCAGCTCCCCATTGAAATTTCAGAGGCTTTGGAGCAGAAATCAGTCCCTTTTGGTTATGGTTACATCCAGTTTATCGACACGGCTGTTGCAGCTGAAGTCTGTGAGGAACTGTTTAGTCCACTTCCTCCTCATGCCGAGCTCGCATTGAATGGTGTTGAAGTATTTATGAATGCAAGTGGGAGTCATCACCAACTTAGGAAACTAGATATTCGTCTGAATGCTTTTATGGGGGCTACTCATGCTCGTGGTGGGGTGTATATGTACAGTAATCAACAAGGATGCGATGGTAGCCGCTTATACTACGATGGATGTGCATGTATTGTTGTAAACGGGAATGTTGTTGCTCAAGGCTCACAATTCTCGTTGAGAGACGTTGAGGTCATCATTTCACAAGTGGATCTTGATGCGGTTGCTAGCCTTCGTGGATCTATAAGTAGCTTTCAGGAACAAGCAAGCTGCAAGGTTAAAGTATCTTCAGTAGCTGTGCCCTGTAGACTTACACAGTCCTTCAACCTGAAAATGACACTAAGCAGTCCGAAGAAGATCATTTACCACTCTCCACAAGAAGAAATAGCCTTTGGTCCCGCTTGCTGGATGTGGGACTATTTGAGAAGAAGTGGCGCTTCAGGATTTTTGCTTCCTCTTTCTGGCGGAGCAGACAGCTCCTCCGTGGCAGCTATTGTTGGCTGCATGTGCCAACTTGTTGTTAAAGAGATTGCAAAGGGAGATGAGCAAGTAAAAGCTGATGCGAACCGAATTGGGAATTATGCTAATGGGCAGTTTCCTACTGATAGCAAAGAGTTTGCCAAACGAATATTTTACACTGTCTTTATGGGTTCTGAAAACAGTTCTGAGGAGACAAAAAGGCGTTCAAAGCAGCTGGCAGACGAGATTGGTGCTTGGCATCTTGATGTTTGCATAGATGGTGTTGTCTCTGCAGTTTTATCATTATTTCAAACAGTTACAGGCAAGCGACCAAGGTATAAGGTTGATGGAGGATCAAATGCTGAGAACCTTGGGTTGCAGAACATTCAAGCCCGGATGAGAATGGTGTTAGCATTTATGTTAGCGTCTCTCTTGCCTTGGGTTCATAGCAAACCAGGCTTTTACCTTGTTCTAGGCAGCTCCAACGTTGATGAAGGACTTCGTGGTTACCTGACAAAGTATGATTGCAGCTCAGCAGACATAAATCCTATAGGAAGTATCAGTAAAATGGATTTGAGGTTGTTCTTAAAATGGGCTGCAACGAATCTCGGATATCCATCCTTGGCAGAGATAGAAGCTGCTCCACCAACAGCTGAGCTTGAGCCCATTCGTTCTGACTATTCTCAGCTCGATGAAGTCGACATGGGAATGACATATGAAGAGCTTTCAGTCTATGGAAGGATGAGGAAGATATTCCGTTGTGGACCAGTATCTATGTTCAAGAATCTATGTTACAAGTGGGGAACAAAGCTAAGCCCAGCAGAAGTAGCTGAGAAAGTGAAGTATTTCTTCAAATATTATTCGATCAATCGACACAAAATGACTGTCCTCACACCGTCTTATCACGCTGAGAGTTACTCCCCAGAGGACAACAGATTCGATCTGAGGCAGTTTCTGTACAACAGCAAGTGGCCATACCAGTTTAAGAAGATTGACGAGATTGTTGACAGCTTAAATGGTGACTCAGTTGCTTTCCCGGAAGAAGAAGCAAACTCCAACAAAGAAATTGGAGTTGTAGCAGCAAACTCCGGAGACCCAAGTGCGGGTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003952 GO:0004359 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009987 GO:0016787 GO:0016810 GO:0016811 GO:0016874 GO:0016879 GO:0016884 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

CN_hydrolase NAD_synthase

Protein Analysis

725

Amino Acids

80.9

Weight (kDa)

5.61

Isoelectric Point (pI)

44.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CN_hydrolase	PF00795	5 - 281	1.2e-32	Carbon-nitrogen hydrolase
NAD_synthase	PF02540	338 - 598	1.4e-24	NAD synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55090
fragaria_vesca	FvH4_5g11490 FvH4_5g11490 FvH4_5g11490
malus_domestica	MD06G1113100.v1.1 MD14G1134200.v1.1
prunus_persica	Prupe.5G126000_v2.0.a1
pyrus_communis	pycom06g10580
rosa_chinensis	RchiOBHm_Chr7g0186311
rosa_laevigata	RLG00000004850
rosa_multiflora	Rmu_sc0000645.1_g000051
rosa_roxburghii	Rroxscaffold_3G00268230
rosa_rugosa	Rorug06G0473200 Rorug06G0473300 Rorug06G0473400 Rorug06G0473400
rosa_samantha	Rh7AG067800 Rh7BG083600 Rh7DG080800
rosa_wichuraiana	Rw7G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	288
AasI	GACNNNNNNGTC	1 cut(s)	797
AccI	GTMKAC	2 cut(s)	913, 1764
AccIII	TCCGGA	1 cut(s)	2153
AciI	CCGC	5 cut(s)	712, 827, 1005, 1071, 2168
AclI	AACGTT	1 cut(s)	1551
AclWI	GGATC	4 cut(s)	168, 825, 853, 1426
AcoI	YGGCCR	1 cut(s)	2036
AcsI	RAATTY	2 cut(s)	416, 435
AcuI	CTGAAG	3 cut(s)	534, 879, 1029
AfaI	GTAC	2 cut(s)	683, 2024
AfiI	CCNNNNNNNGG	4 cut(s)	1011, 1067, 2167, 2168
AflIII	ACRYGT	1 cut(s)	23
AjnI	CCWGG	2 cut(s)	294, 1519
AjuI	GAANNNNNNNTTGG	4 cut(s)	204, 236, 981, 1013
Alw21I	GWGCWC	2 cut(s)	135, 561
Alw26I	GTCTC	5 cut(s)	783, 1271, 1357, 1497, 2151
AlwI	GGATC	4 cut(s)	168, 825, 853, 1426
AlwNI	CAGNNNCTG	2 cut(s)	902, 2020
Ama87I	CYCGRG	2 cut(s)	128, 134
Aor13HI	TCCGGA	1 cut(s)	2153
AoxI	GGCC	2 cut(s)	42, 2036
ApoI	RAATTY	2 cut(s)	416, 435
ArsI	GACNNNNNNTTYG	4 cut(s)	1935, 1967, 1985, 2017
Asp700I	GAANNNNTTC	3 cut(s)	1563, 1817, 1910
AspLEI	GCGC	1 cut(s)	1043
AspS9I	GGNCC	4 cut(s)	42, 125, 1001, 1829
AsuC2I	CCSGG	2 cut(s)	1459, 2102
AsuHPI	GGTGA	3 cut(s)	236, 599, 2096
AsuNHI	GCTAGC	1 cut(s)	833
AvaI	CYCGRG	2 cut(s)	128, 134
AvaII	GGWCC	3 cut(s)	125, 1001, 1829
BaeGI	GKGCMC	1 cut(s)	909
BalI	TGGCCA	1 cut(s)	2038
BanII	GRGCYC	3 cut(s)	135, 561, 1731
BarI	GAAGNNNNNNTAC	2 cut(s)	953, 985
BauI	CACGAG	1 cut(s)	663
Bbv12I	GWGCWC	2 cut(s)	135, 561
BbvCI	CCTCAGC	1 cut(s)	90
BccI	CCATC	6 cut(s)	350, 698, 719, 1337, 1406, 1690
BceAI	ACGGC	1 cut(s)	516
BcgI	CGANNNNNNTGC	4 cut(s)	713, 747, 1298, 1332
BciT130I	CCWGG	2 cut(s)	296, 1521
BcnI	CCSGG	2 cut(s)	1459, 2102
BcoDI	GTCTC	5 cut(s)	783, 1271, 1357, 1497, 2151
BfaI	CTAG	4 cut(s)	410, 623, 834, 1538
BfmI	CTRYAG	4 cut(s)	364, 910, 1356, 1614
BfoI	RGCGCY	1 cut(s)	1044
BlpI	GCTNAGC	3 cut(s)	1597, 1719, 1877
Bme1390I	CCNGG	4 cut(s)	296, 1459, 1521, 2102
Bme18I	GGWCC	3 cut(s)	125, 1001, 1829
BmeT110I	CYCGRG	2 cut(s)	128, 134
BmgT120I	GGNCC	4 cut(s)	42, 125, 1001, 1829
BmiI	GGNNCC	2 cut(s)	127, 1003
BmrFI	CCNGG	4 cut(s)	296, 1459, 1521, 2102
BmsI	GCATC	4 cut(s)	689, 814, 1156, 1333
BmtI	GCTAGC	1 cut(s)	837
BplI	GAGNNNNNCTC	2 cut(s)	1967, 1999
Bpu10I	CCTNAGC	1 cut(s)	90
Bpu1102I	GCTNAGC	3 cut(s)	1597, 1719, 1877
BpuEI	CTTGAG	2 cut(s)	750, 1745
BpuMI	CCSGG	2 cut(s)	1459, 2102
BsaAI	YACGTR	1 cut(s)	24
BsaBI	GATNNNNATC	1 cut(s)	1681
BsaI	GGTCTC	1 cut(s)	2151
BsaJI	CCNNGG	6 cut(s)	45, 1089, 1397, 1435, 1502, 1686
BsaWI	WCCGGW	1 cut(s)	2153
BsaXI	ACNNNNNCTCC	4 cut(s)	362, 392, 1070, 1100
Bsc4I	CCNNNNNNNGG	4 cut(s)	1011, 1067, 2167, 2168
Bse1I	ACTGG	4 cut(s)	148, 487, 1832, 2044
Bse8I	GATNNNNATC	1 cut(s)	1681
BseAI	TCCGGA	1 cut(s)	2153
BseBI	CCWGG	2 cut(s)	296, 1521
BseDI	CCNNGG	6 cut(s)	45, 1089, 1397, 1435, 1502, 1686
BseGI	GGATG	8 cut(s)	241, 483, 704, 734, 1020, 1467, 1682, 1812
BseJI	GATNNNNATC	1 cut(s)	1681
BseLI	CCNNNNNNNGG	4 cut(s)	1011, 1067, 2167, 2168
BseNI	ACTGG	4 cut(s)	148, 487, 1832, 2044
BseRI	GAGGAG	3 cut(s)	537, 1075, 1289
BseSI	GKGCMC	1 cut(s)	909
BseYI	CCCAGC	1 cut(s)	1882
BsgI	GTGCAG	1 cut(s)	268
Bsh1285I	CGRYCG	2 cut(s)	87, 335
BshFI	GGCC	2 cut(s)	44, 2038
BsiEI	CGRYCG	2 cut(s)	87, 335
BsiHKAI	GWGCWC	2 cut(s)	135, 561
BsiHKCI	CYCGRG	2 cut(s)	128, 134
BsiSI	CCGG	3 cut(s)	1459, 2102, 2154
BslFI	GGGAC	3 cut(s)	449, 987, 1034
BslI	CCNNNNNNNGG	4 cut(s)	1011, 1067, 2167, 2168
BsmAI	GTCTC	5 cut(s)	783, 1271, 1357, 1497, 2151
BsmBI	CGTCTC	2 cut(s)	783, 1497
BsmFI	GGGAC	3 cut(s)	449, 987, 1034
BsmI	GAATGC	3 cut(s)	264, 595, 643
BsnI	GGCC	2 cut(s)	44, 2038
Bso31I	GGTCTC	1 cut(s)	2151
BsoBI	CYCGRG	2 cut(s)	128, 134
Bsp1286I	GDGCHC	4 cut(s)	135, 561, 909, 1731
Bsp13I	TCCGGA	1 cut(s)	2153
Bsp1407I	TGTACA	2 cut(s)	681, 2022
Bsp143I	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
Bsp1720I	GCTNAGC	3 cut(s)	1597, 1719, 1877
Bsp19I	CCATGG	1 cut(s)	45
BspACI	CCGC	5 cut(s)	712, 827, 1005, 1071, 2168
BspANI	GGCC	2 cut(s)	44, 2038
BspEI	TCCGGA	1 cut(s)	2153
BspHI	TCATGA	1 cut(s)	324
BspLI	GGNNCC	2 cut(s)	127, 1003
BspMAI	CTGCAG	1 cut(s)	1360
BspOI	GCTAGC	1 cut(s)	837
BspPI	GGATC	4 cut(s)	168, 825, 853, 1426
BspQI	GCTCTTC	2 cut(s)	399, 1779
BspTNI	GGTCTC	1 cut(s)	2151
BsrGI	TGTACA	2 cut(s)	681, 2022
BsrI	ACTGG	4 cut(s)	148, 487, 1832, 2044
BssECI	CCNNGG	6 cut(s)	45, 1089, 1397, 1435, 1502, 1686
BssMI	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
BssSI	CACGAG	1 cut(s)	663
BssT1I	CCWWGG	5 cut(s)	45, 1397, 1435, 1502, 1686
Bst2BI	CACGAG	1 cut(s)	663
Bst2UI	CCWGG	2 cut(s)	296, 1521
Bst6I	CTCTTC	2 cut(s)	399, 1779
BstAPI	GCANNNNNTGC	1 cut(s)	101
BstAUI	TGTACA	2 cut(s)	681, 2022
BstBAI	YACGTR	1 cut(s)	24
BstC8I	GCNNGC	7 cut(s)	348, 561, 835, 874, 1009, 1302, 1391
BstDSI	CCRYGG	2 cut(s)	45, 1089
BstEII	GGTNACC	1 cut(s)	1571
BstF5I	GGATG	8 cut(s)	241, 483, 704, 734, 1020, 1467, 1682, 1812
BstH2I	RGCGCY	1 cut(s)	1044
BstHHI	GCGC	1 cut(s)	1043
BstKTI	GATC	8 cut(s)	87, 163, 820, 848, 966, 1421, 1932, 2008
BstMAI	GTCTC	5 cut(s)	783, 1271, 1357, 1497, 2151
BstMBI	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
BstMCI	CGRYCG	2 cut(s)	87, 335
BstNI	CCWGG	2 cut(s)	296, 1521
BstNSI	RCATGY	2 cut(s)	738, 1114
BstPI	GGTNACC	1 cut(s)	1571
BstSCI	CCNGG	4 cut(s)	294, 1457, 1519, 2100
BstSFI	CTRYAG	4 cut(s)	364, 910, 1356, 1614
BstSLI	GKGCMC	1 cut(s)	909
BstX2I	RGATCY	2 cut(s)	817, 845
BstYI	RGATCY	2 cut(s)	817, 845
BsuRI	GGCC	2 cut(s)	44, 2038
BtgI	CCRYGG	2 cut(s)	45, 1089
BtgZI	GCGATG	1 cut(s)	717
BtsCI	GGATG	8 cut(s)	241, 483, 704, 734, 1020, 1467, 1682, 1812
BtsIMutI	CAGTG	3 cut(s)	141, 180, 1242
Cac8I	GCNNGC	7 cut(s)	348, 561, 835, 874, 1009, 1302, 1391
CaiI	CAGNNNCTG	2 cut(s)	902, 2020
CciI	TCATGA	1 cut(s)	324
CfoI	GCGC	1 cut(s)	1043
Cfr13I	GGNCC	4 cut(s)	42, 125, 1001, 1829
CseI	GACGC	1 cut(s)	1479
Csp6I	GTAC	2 cut(s)	682, 2023
CviAII	CATG	9 cut(s)	46, 64, 191, 325, 551, 659, 735, 1111, 1768
CviQI	GTAC	2 cut(s)	682, 2023
DpnI	GATC	8 cut(s)	86, 162, 819, 847, 965, 1420, 1931, 2007
DpnII	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
DrdI	GACNNNNNNGTC	1 cut(s)	797
DseDI	GACNNNNNNGTC	1 cut(s)	797
EaeI	YGGCCR	1 cut(s)	2036
Eam1104I	CTCTTC	2 cut(s)	399, 1779
EarI	CTCTTC	2 cut(s)	399, 1779
EciI	GGCGGA	1 cut(s)	1086
Ecl136II	GAGCTC	2 cut(s)	133, 559
Eco130I	CCWWGG	5 cut(s)	45, 1397, 1435, 1502, 1686
Eco24I	GRGCYC	3 cut(s)	135, 561, 1731
Eco31I	GGTCTC	1 cut(s)	2151
Eco32I	GATATC	1 cut(s)	1679
Eco47I	GGWCC	3 cut(s)	125, 1001, 1829
Eco53kI	GAGCTC	2 cut(s)	133, 559
Eco57I	CTGAAG	3 cut(s)	534, 879, 1029
Eco88I	CYCGRG	2 cut(s)	128, 134
Eco91I	GGTNACC	1 cut(s)	1571
EcoICRI	GAGCTC	2 cut(s)	133, 559
EcoO65I	GGTNACC	1 cut(s)	1571
EcoRII	CCWGG	2 cut(s)	294, 1519
EcoRV	GATATC	1 cut(s)	1679
EcoT14I	CCWWGG	5 cut(s)	45, 1397, 1435, 1502, 1686
EcoT38I	GRGCYC	3 cut(s)	135, 561, 1731
ErhI	CCWWGG	5 cut(s)	45, 1397, 1435, 1502, 1686
Esp3I	CGTCTC	2 cut(s)	783, 1497
FaeI	CATG	9 cut(s)	49, 67, 194, 328, 554, 662, 738, 1114, 1771
FalI	AAGNNNNNCTT	6 cut(s)	804, 836, 1027, 1059, 1898, 1930
FaqI	GGGAC	3 cut(s)	449, 987, 1034
FatI	CATG	9 cut(s)	45, 63, 190, 324, 550, 658, 734, 1110, 1767
FauI	CCCGC	2 cut(s)	1012, 2161
FauNDI	CATATG	1 cut(s)	1780
FblI	GTMKAC	2 cut(s)	913, 1764
FokI	GGATG	8 cut(s)	248, 470, 711, 741, 1027, 1474, 1669, 1819
FriOI	GRGCYC	3 cut(s)	135, 561, 1731
FspBI	CTAG	4 cut(s)	410, 623, 834, 1538
GlaI	GCGC	1 cut(s)	1042
GsaI	CCCAGC	1 cut(s)	1886
HaeII	RGCGCY	1 cut(s)	1044
HaeIII	GGCC	2 cut(s)	44, 2038
HapII	CCGG	3 cut(s)	1459, 2102, 2154
HgaI	GACGC	1 cut(s)	1479
HhaI	GCGC	1 cut(s)	1043
Hin1II	CATG	9 cut(s)	49, 67, 194, 328, 554, 662, 738, 1114, 1771
Hin6I	GCGC	1 cut(s)	1041
HinP1I	GCGC	1 cut(s)	1041
HincII	GTYRAC	2 cut(s)	1765, 2071
HindII	GTYRAC	2 cut(s)	1765, 2071
HinfI	GANTC	7 cut(s)	318, 328, 601, 1669, 1849, 2001, 2087
HpaII	CCGG	3 cut(s)	1459, 2102, 2154
HphI	GGTGA	3 cut(s)	236, 599, 2096
Hpy166II	GTNNAC	7 cut(s)	384, 539, 748, 914, 1765, 1829, 2071
Hpy188I	TCNGA	9 cut(s)	442, 636, 957, 1261, 1273, 1676, 1741, 2010, 2177
Hpy188III	TCNNGA	8 cut(s)	55, 325, 821, 863, 1047, 1328, 1846, 2154
Hpy8I	GTNNAC	7 cut(s)	384, 539, 748, 914, 1765, 1829, 2071
HpyAV	CCTTC	6 cut(s)	7, 202, 848, 937, 1553, 1797
HpyCH4IV	ACGT	3 cut(s)	23, 792, 1551
HpySE526I	ACGT	3 cut(s)	23, 792, 1551
Hsp92II	CATG	9 cut(s)	49, 67, 194, 328, 554, 662, 738, 1114, 1771
HspAI	GCGC	1 cut(s)	1041
Kpn2I	TCCGGA	1 cut(s)	2153
Kzo9I	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
LguI	GCTCTTC	2 cut(s)	399, 1779
LmnI	GCTCC	8 cut(s)	275, 370, 429, 451, 1073, 1088, 1550, 1711
LweI	GCATC	4 cut(s)	689, 814, 1156, 1333
MaeI	CTAG	4 cut(s)	410, 623, 834, 1538
MaeII	ACGT	3 cut(s)	23, 792, 1551
MaeIII	GTNAC	9 cut(s)	26, 139, 184, 479, 1381, 1571, 1856, 1979, 2084
MalI	GATC	8 cut(s)	86, 162, 819, 847, 965, 1420, 1931, 2007
MboI	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
MflI	RGATCY	2 cut(s)	817, 845
MhlI	GDGCHC	4 cut(s)	135, 561, 909, 1731
MlsI	TGGCCA	1 cut(s)	2038
MluCI	AATT	7 cut(s)	212, 416, 435, 776, 1176, 1183, 2130
MluNI	TGGCCA	1 cut(s)	2038
MlyI	GAGTC	2 cut(s)	610, 2081
MmeI	TCCRAC	2 cut(s)	1572, 2145
Mox20I	TGGCCA	1 cut(s)	2038
MroI	TCCGGA	1 cut(s)	2153
MroXI	GAANNNNTTC	3 cut(s)	1563, 1817, 1910
MscI	TGGCCA	1 cut(s)	2038
MseI	TTAA	6 cut(s)	270, 885, 1128, 1652, 2049, 2078
MslI	CAYNNNNRTG	4 cut(s)	257, 663, 1329, 1772
Msp20I	TGGCCA	1 cut(s)	2038
MspA1I	CMGCKG	3 cut(s)	512, 1300, 1718
MspI	CCGG	3 cut(s)	1459, 2102, 2154
MspR9I	CCNGG	4 cut(s)	296, 1459, 1521, 2102
Mva1269I	GAATGC	3 cut(s)	264, 595, 643
MvaI	CCWGG	2 cut(s)	296, 1521
NciI	CCSGG	2 cut(s)	1459, 2102
NcoI	CCATGG	1 cut(s)	45
NdeI	CATATG	1 cut(s)	1780
NdeII	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
NheI	GCTAGC	1 cut(s)	833
NlaIII	CATG	9 cut(s)	49, 67, 194, 328, 554, 662, 738, 1114, 1771
NlaIV	GGNNCC	2 cut(s)	127, 1003
NmeAIII	GCCGAG	1 cut(s)	580
NmuCI	GTSAC	3 cut(s)	139, 184, 2084
NspI	RCATGY	2 cut(s)	738, 1114
PaeR7I	CTCGAG	1 cut(s)	134
PagI	TCATGA	1 cut(s)	324
PciSI	GCTCTTC	2 cut(s)	399, 1779
PcsI	WCGNNNNNNNCGW	1 cut(s)	1761
PctI	GAATGC	3 cut(s)	264, 595, 643
PdmI	GAANNNNTTC	3 cut(s)	1563, 1817, 1910
PfeI	GAWTC	5 cut(s)	318, 328, 1669, 1849, 2001
PflFI	GACNNNGTC	1 cut(s)	182
PfoI	TCCNGGA	1 cut(s)	2100
Ple19I	CGATCG	1 cut(s)	87
PleI	GAGTC	2 cut(s)	609, 2081
PpsI	GAGTC	2 cut(s)	609, 2081
Ppu21I	YACGTR	1 cut(s)	24
PsiI	TTATAA	1 cut(s)	288
Psp124BI	GAGCTC	2 cut(s)	135, 561
Psp1406I	AACGTT	1 cut(s)	1551
Psp6I	CCWGG	2 cut(s)	294, 1519
PspEI	GGTNACC	1 cut(s)	1571
PspFI	CCCAGC	1 cut(s)	1882
PspGI	CCWGG	2 cut(s)	294, 1519
PspN4I	GGNNCC	2 cut(s)	127, 1003
PspPI	GGNCC	4 cut(s)	42, 125, 1001, 1829
PspXI	VCTCGAGB	1 cut(s)	134
PstI	CTGCAG	1 cut(s)	1360
PstNI	CAGNNNCTG	2 cut(s)	902, 2020
PsuI	RGATCY	2 cut(s)	817, 845
PsyI	GACNNNGTC	1 cut(s)	182
PvuI	CGATCG	1 cut(s)	87
PvuII	CAGCTG	3 cut(s)	512, 1300, 1718
RsaI	GTAC	2 cut(s)	683, 2024
RsaNI	GTAC	2 cut(s)	682, 2023
RseI	CAYNNNNRTG	4 cut(s)	257, 663, 1329, 1772
SacI	GAGCTC	2 cut(s)	135, 561
SalI	GTCGAC	1 cut(s)	1763
SapI	GCTCTTC	2 cut(s)	399, 1779
SaqAI	TTAA	6 cut(s)	270, 885, 1128, 1652, 2049, 2078
Sau3AI	GATC	8 cut(s)	84, 160, 817, 845, 963, 1418, 1929, 2005
Sau96I	GGNCC	4 cut(s)	42, 125, 1001, 1829
SchI	GAGTC	2 cut(s)	610, 2081
ScrFI	CCNGG	4 cut(s)	296, 1459, 1521, 2102
SduI	GDGCHC	4 cut(s)	135, 561, 909, 1731
SfaNI	GCATC	4 cut(s)	689, 814, 1156, 1333
SfcI	CTRYAG	4 cut(s)	364, 910, 1356, 1614
Sfr274I	CTCGAG	1 cut(s)	134
SinI	GGWCC	3 cut(s)	125, 1001, 1829
SlaI	CTCGAG	1 cut(s)	134
SmiMI	CAYNNNNRTG	4 cut(s)	257, 663, 1329, 1772
SmlI	CTYRAG	3 cut(s)	134, 765, 1724
SmoI	CTYRAG	3 cut(s)	134, 765, 1724
Sse9I	AATT	7 cut(s)	212, 416, 435, 776, 1176, 1183, 2130
SsiI	CCGC	5 cut(s)	712, 827, 1005, 1071, 2168
SspI	AATATT	2 cut(s)	1236, 1922
SspMI	CTAG	4 cut(s)	410, 623, 834, 1538
SstI	GAGCTC	2 cut(s)	135, 561
StyD4I	CCNGG	4 cut(s)	294, 1457, 1519, 2100
StyI	CCWWGG	5 cut(s)	45, 1397, 1435, 1502, 1686
TaiI	ACGT	3 cut(s)	26, 795, 1554
TaqII	GACCGA	1 cut(s)	349
TasI	AATT	7 cut(s)	212, 416, 435, 776, 1176, 1183, 2130
TatI	WGTACW	2 cut(s)	681, 2022
TauI	GCSGC	1 cut(s)	714
TfiI	GAWTC	5 cut(s)	318, 328, 1669, 1849, 2001
Tru1I	TTAA	6 cut(s)	270, 885, 1128, 1652, 2049, 2078
Tru9I	TTAA	6 cut(s)	270, 885, 1128, 1652, 2049, 2078
TscAI	CASTG	3 cut(s)	148, 187, 1249
TseFI	GTSAC	3 cut(s)	139, 184, 2084
Tsp45I	GTSAC	3 cut(s)	139, 184, 2084
TspDTI	ATGAA	7 cut(s)	80, 323, 602, 1499, 1572, 1773, 1797
TspGWI	ACGGA	3 cut(s)	248, 1078, 1811
TspRI	CASTG	3 cut(s)	148, 187, 1249
Tth111I	GACNNNGTC	1 cut(s)	182
VpaK11BI	GGWCC	3 cut(s)	125, 1001, 1829
XapI	RAATTY	2 cut(s)	416, 435
XceI	RCATGY	2 cut(s)	738, 1114
XhoI	CTCGAG	1 cut(s)	134
XmiI	GTMKAC	2 cut(s)	913, 1764
XmnI	GAANNNNTTC	3 cut(s)	1563, 1817, 1910
XspI	CTAG	4 cut(s)	410, 623, 834, 1538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.