Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0011226

Physical Location & Seq

Genomic Coordinates Forward (+)

63062730 .. 63068099

Gene Structure 5370 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004850

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGAATAAGAAGCCAACCGGAATGACTTTCTCCGAGTCTTTGTTGGGTGAAGAGAAGATGAGGCTGCTGAAAGTTGCAACCTGCAATTTGAACCAATGGGCTATGGACTTCGATTGCAATATCAAGAACATCAAGGAGTCCATAGCTAAGGCCAAGGAGGCCGGAGCTGTGATCCGGCTCGGGCCTGAGCTTGAGATTACTGGCTATGGCTGTGAAGACCATTTCCTGGAGCTTGATACTGTCACTCATGCGTGGGAGTGTTTGAAGGAGCTGTTAGTGGGGGATTGGACTGATGGGATATTATGCAGTTTTGGGATGCCTGTGATCAAAGGGTCGGAGCGTTATAATTGTCAGATTCTTTGTATGAATAGAAAGATTATTATGATTCGGCCAAAAATGTGGCTTGCGAATGATGGGAATTACAGGGAGCTTAGGTGGTTTACAGCATGGAAACAGAAAGACCAACTTGTGGAGTTTCAGCTGCCAGGGGATGTTTCCATGGCTTTGTCACAGGAATTGGTGCCTTTTGGTTATGGATTCATTCAGTTTCGGGACACAGCTGTTGCAGCTGAAGTTTGTGAGGAGCTTTTTACTCCCGTACCTCCTCATGCTGAGCTTGCATTGAATGGGGTTGAAGTGTTTCTGAATGCAAGTGGAAGTCATCACCAACTAAGAAAGCTTGATATTCGTCTTCGTGCTTTTATAGGTGCCACTCACACACGTGGAGGGGTGTACATATACAGCAACCACCAAGGGTGTGATGGTGGTCGCCTTTACTATGATGGATGTGCTTCTGTTGTTGTTAATGGAGATCTTGTTGCTCAAGGCTCGCAGTTTTCTTTGAACGATGTCGAGGTTGTGATAGCCCAAATTGATTTAGAAGCGGTTGCTAGTCTAAGAGGATCTATAAGTAGCTTCCAAGAGCAAGCAAGCTGCAAAAACAGGGTTCCTTCGGTGCAGGCACCATACAACCTTTGTCAGTCATTTAATCTGAAAATGTGCCTTTCAAGTCCACTTAAGATTAAGTATCACTCTCCTGAAGAGGAAATAGCCTTTGGTCCTGCTTGTTGGTTATGGGACTATTTAAGAAGAAGTGGAGCTTCTGGGTTTCTGCTACCCCTTTCTGGTGGAGCAGATAGCTCGTCTGTGGCTGCTATAGTTGGCTGCATGTGTCAGCTTGTAGTAAAAGATATTGTGAATGGGGATGAACAAGTCAAAGCTGATGCCATACGAATTGGACAGTACACTGATGGGCAGTATCCTACTGACAGCAGAGAATTTGCAAGACGCGTATTTTACACTGTTTTCATGGGATCTGAAAACAGTTCCGAATTGACAAAATCACGGGCAAAGGTTCTAGCAGATGAAATTGGCGCATGGCATCTTGATATCAGTATAGATGGTGTTATTTCTGCACTTCTGACGCTGTTTCAAGCAGTGACAGGAAAACGACCACGATATAAGATAGATGGAGGATCTAATGCTGAGAACTTAGGTTTGCAAAACATTCAAGCACGAATCCGAATGGTTCTGGCTTTTATGTTTGCATCACTTCTACCTTGGGTTCATAACAAACCTGGGTTTTATCTTGTTCTGGGTAGTTCCAATGTGGATGAAGGATTGCGGGGTTACCTCACTAAGTATGACTGCAGCTCAGCAGATATAAATCCAATTGGAAGCATTAGTAAGCAGGATCTTCGGGCATTTCTGCGATGGGCTGCCACCCATCTTGGTTACGCATCCTTGGCAGATATTGAAGCAGCACCACCCACTGCTGAACTGGAGCCTATACGTTCCAACTATAGTCAGTTGGATGAAGTGGACATGGGAATGACATATGAGGAACTCTCGGTCTATGGAAGGTTACGAAAGATTTTTCGTTGTGGTCCCATGTCTATGTTTAAGAACCTCTGCTATAGATGGGGTGCAAAATTGACTCCACAAGAGGTGGCTGAGAAAGTAAAGCACTTTTTCAAGTACTACTCCATTAATCGACACAAAATGACCACACTAACTCCTTCTTATCATGCTGAGAGTTATTCGCCAGAGGATAATAGGTTTGATCTTCGCCAATTTCTATACAATGTAAGATGGCCATACCAGTTTCGAAAGATTGATGAACTTGTAAAAGAGTTAGATGGTGACAGAGTTCATTTGGGAGAATCAAGCGACTTGGGAGATGCTTCACATGGTGGAGGAATGGGAGTTGTGGCAGCTGGCTCAGGCAATCCAAATGTTGGACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003952 GO:0004359 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009987 GO:0016787 GO:0016810 GO:0016811 GO:0016874 GO:0016879 GO:0016884 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

CN_hydrolase NAD_synthase

Protein Analysis

749

Amino Acids

83.37

Weight (kDa)

5.96

Isoelectric Point (pI)

42.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CN_hydrolase	PF00795	24 - 300	1.4e-32	Carbon-nitrogen hydrolase
NAD_synthase	PF02540	357 - 618	1.2e-25	NAD synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55090
fragaria_vesca	FvH4_5g11490 FvH4_5g11490 FvH4_5g11490
malus_domestica	MD06G1113100.v1.1 MD14G1134200.v1.1
prunus_persica	Prupe.5G126000_v2.0.a1
pyrus_communis	pycom06g10580
rosa_chinensis	RchiOBHm_Chr7g0186311
rosa_laevigata	RLG00000004850
rosa_multiflora	Rmu_sc0000645.1_g000051
rosa_roxburghii	Rroxscaffold_3G00268230
rosa_rugosa	Rorug06G0473200 Rorug06G0473300 Rorug06G0473400 Rorug06G0473400
rosa_samantha	Rh7AG067800 Rh7BG083600 Rh7DG080800
rosa_wichuraiana	Rw7G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	345
Acc36I	ACCTGC	1 cut(s)	89
AccB1I	GGYRCC	3 cut(s)	520, 707, 961
AccB7I	CCANNNNNTGG	3 cut(s)	226, 469, 2237
AccII	CGCG	1 cut(s)	1290
AciI	CCGC	2 cut(s)	884, 1624
AclWI	GGATC	5 cut(s)	166, 910, 1321, 1483, 1701
AcoI	YGGCCR	2 cut(s)	389, 2093
AcsI	RAATTY	1 cut(s)	1277
AcuI	CTGAAG	2 cut(s)	591, 1059
AcvI	CACGTG	1 cut(s)	722
AdeI	CACNNNGTG	1 cut(s)	2192
AfaI	GTAC	4 cut(s)	600, 734, 1244, 1979
AfiI	CCNNNNNNNGG	4 cut(s)	226, 469, 1124, 2237
AflII	CTTAAG	1 cut(s)	1016
AflIII	ACRYGT	2 cut(s)	719, 1288
AjnI	CCWGG	3 cut(s)	225, 484, 1576
AjuI	GAANNNNNNNTTGG	2 cut(s)	1038, 1070
AleI	CACNNNNGTG	1 cut(s)	720
AlwI	GGATC	5 cut(s)	166, 910, 1321, 1483, 1701
Ama87I	CYCGRG	1 cut(s)	179
AoxI	GGCC	5 cut(s)	150, 159, 182, 389, 2093
ApoI	RAATTY	1 cut(s)	1277
AseI	ATTAAT	1 cut(s)	1989
Asp700I	GAANNNNTTC	1 cut(s)	639
AspLEI	GCGC	1 cut(s)	1376
AspS9I	GGNCC	3 cut(s)	182, 1058, 1886
AsuHPI	GGTGA	3 cut(s)	59, 656, 2153
AsuII	TTCGAA	1 cut(s)	2107
AvaI	CYCGRG	1 cut(s)	179
AvaII	GGWCC	2 cut(s)	1058, 1886
BaeI	ACNNNNGTAYC	2 cut(s)	582, 615
BalI	TGGCCA	1 cut(s)	2095
BanI	GGYRCC	3 cut(s)	520, 707, 961
BbrPI	CACGTG	1 cut(s)	722
BbsI	GAAGAC	2 cut(s)	222, 683
BcgI	CGANNNNNNTGC	4 cut(s)	1122, 1156, 1679, 1713
BciT130I	CCWGG	3 cut(s)	227, 486, 1578
BciVI	GTATCC	1 cut(s)	1269
BclI	TGATCA	1 cut(s)	324
BfaI	CTAG	3 cut(s)	891, 1358, 2245
BfmI	CTRYAG	4 cut(s)	1155, 1648, 1801, 1915
BfrI	CTTAAG	1 cut(s)	1016
BfuAI	ACCTGC	1 cut(s)	89
BfuI	GTATCC	1 cut(s)	1269
BglI	GCCNNNNNGGC	1 cut(s)	158
BglII	AGATCT	1 cut(s)	811
BlpI	GCTNAGC	2 cut(s)	612, 1654
BmcAI	AGTACT	1 cut(s)	1979
Bme1390I	CCNGG	3 cut(s)	227, 486, 1578
Bme18I	GGWCC	2 cut(s)	1058, 1886
BmeT110I	CYCGRG	1 cut(s)	179
BmgT120I	GGNCC	3 cut(s)	182, 1058, 1886
BmiI	GGNNCC	6 cut(s)	522, 709, 948, 963, 1785, 1888
BmrFI	CCNGG	3 cut(s)	227, 486, 1578
BmsI	GCATC	6 cut(s)	306, 1213, 1390, 1556, 1748, 2170
BpiI	GAAGAC	2 cut(s)	222, 683
BplI	GAGNNNNNCTC	2 cut(s)	1832, 1864
BpmI	CTGGAG	2 cut(s)	248, 1802
Bpu10I	CCTNAGC	4 cut(s)	147, 186, 431, 2221
Bpu1102I	GCTNAGC	2 cut(s)	612, 1654
Bpu14I	TTCGAA	1 cut(s)	2107
BpuEI	CTTGAG	2 cut(s)	212, 807
BsaAI	YACGTR	1 cut(s)	722
BsaBI	GATNNNNATC	1 cut(s)	1665
BsaJI	CCNNGG	7 cut(s)	153, 485, 498, 751, 1559, 1577, 1743
BsaWI	WCCGGW	1 cut(s)	17
BsaXI	ACNNNNNCTCC	6 cut(s)	419, 449, 801, 831, 1999, 2029
Bsc4I	CCNNNNNNNGG	4 cut(s)	226, 469, 1124, 2237
Bse1I	ACTGG	3 cut(s)	205, 1785, 2101
Bse8I	GATNNNNATC	1 cut(s)	1665
BseBI	CCWGG	3 cut(s)	227, 486, 1578
BseDI	CCNNGG	7 cut(s)	153, 485, 498, 751, 1559, 1577, 1743
BseGI	GGATG	7 cut(s)	321, 496, 791, 1210, 1618, 1739, 1819
BseJI	GATNNNNATC	1 cut(s)	1665
BseLI	CCNNNNNNNGG	4 cut(s)	226, 469, 1124, 2237
BseMII	CTCAG	7 cut(s)	177, 603, 1476, 1668, 1944, 2022, 2235
BseNI	ACTGG	3 cut(s)	205, 1785, 2101
BseRI	GAGGAG	2 cut(s)	594, 596
BsgI	GTGCAG	2 cut(s)	977, 1398
Bsh1236I	CGCG	1 cut(s)	1290
BshFI	GGCC	5 cut(s)	152, 161, 184, 391, 2095
BshNI	GGYRCC	3 cut(s)	520, 707, 961
BsiHKCI	CYCGRG	1 cut(s)	179
BsiSI	CCGG	3 cut(s)	18, 162, 175
BslFI	GGGAC	3 cut(s)	566, 1091, 1872
BslI	CCNNNNNNNGG	4 cut(s)	226, 469, 1124, 2237
BsmFI	GGGAC	3 cut(s)	566, 1091, 1872
BsmI	GAATGC	1 cut(s)	652
BsnI	GGCC	5 cut(s)	152, 161, 184, 391, 2095
BsoBI	CYCGRG	1 cut(s)	179
Bsp119I	TTCGAA	1 cut(s)	2107
Bsp1407I	TGTACA	1 cut(s)	732
Bsp143I	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
Bsp1720I	GCTNAGC	2 cut(s)	612, 1654
Bsp19I	CCATGG	1 cut(s)	498
BspACI	CCGC	2 cut(s)	884, 1624
BspANI	GGCC	5 cut(s)	152, 161, 184, 391, 2095
BspCNI	CTCAG	7 cut(s)	178, 604, 1477, 1667, 1945, 2023, 2234
BspFNI	CGCG	1 cut(s)	1290
BspLI	GGNNCC	6 cut(s)	522, 709, 948, 963, 1785, 1888
BspMAI	CTGCAG	1 cut(s)	1652
BspMI	ACCTGC	1 cut(s)	89
BspPI	GGATC	5 cut(s)	166, 910, 1321, 1483, 1701
BspT104I	TTCGAA	1 cut(s)	2107
BspT107I	GGYRCC	3 cut(s)	520, 707, 961
BspTI	CTTAAG	1 cut(s)	1016
BsrGI	TGTACA	1 cut(s)	732
BsrI	ACTGG	3 cut(s)	205, 1785, 2101
BssECI	CCNNGG	7 cut(s)	153, 485, 498, 751, 1559, 1577, 1743
BssMI	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
BssT1I	CCWWGG	5 cut(s)	153, 498, 751, 1559, 1743
Bst2UI	CCWGG	3 cut(s)	227, 486, 1578
Bst4CI	ACNGT	4 cut(s)	241, 1242, 1303, 1325
Bst6I	CTCTTC	2 cut(s)	45, 1035
BstAFI	CTTAAG	1 cut(s)	1016
BstAUI	TGTACA	1 cut(s)	732
BstBAI	YACGTR	1 cut(s)	722
BstBI	TTCGAA	1 cut(s)	2107
BstC8I	GCNNGC	7 cut(s)	405, 618, 830, 927, 931, 960, 2218
BstDSI	CCRYGG	1 cut(s)	498
BstEII	GGTNACC	1 cut(s)	1628
BstF5I	GGATG	7 cut(s)	321, 496, 791, 1210, 1618, 1739, 1819
BstFNI	CGCG	1 cut(s)	1290
BstHHI	GCGC	1 cut(s)	1376
BstKTI	GATC	8 cut(s)	174, 327, 814, 905, 1316, 1478, 1696, 2065
BstMBI	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
BstMWI	GCNNNNNNNGC	4 cut(s)	158, 566, 617, 1745
BstNI	CCWGG	3 cut(s)	227, 486, 1578
BstNSI	RCATGY	1 cut(s)	1171
BstPI	GGTNACC	1 cut(s)	1628
BstSCI	CCNGG	3 cut(s)	225, 484, 1576
BstSFI	CTRYAG	4 cut(s)	1155, 1648, 1801, 1915
BstUI	CGCG	1 cut(s)	1290
BstV2I	GAAGAC	2 cut(s)	222, 683
BstX2I	RGATCY	5 cut(s)	811, 902, 1313, 1475, 1693
BstXI	CCANNNNNNTGG	1 cut(s)	399
BstYI	RGATCY	5 cut(s)	811, 902, 1313, 1475, 1693
BsuI	GTATCC	1 cut(s)	1269
BsuRI	GGCC	5 cut(s)	152, 161, 184, 391, 2095
BtgI	CCRYGG	1 cut(s)	498
BtgZI	GCGATG	1 cut(s)	1726
BtsCI	GGATG	7 cut(s)	321, 496, 791, 1210, 1618, 1739, 1819
BtsI	GCAGTG	2 cut(s)	1443, 1770
BtsIMutI	CAGTG	4 cut(s)	1245, 1299, 1443, 1770
BveI	ACCTGC	1 cut(s)	89
Cac8I	GCNNGC	7 cut(s)	405, 618, 830, 927, 931, 960, 2218
CfoI	GCGC	1 cut(s)	1376
Cfr13I	GGNCC	3 cut(s)	182, 1058, 1886
CseI	GACGC	2 cut(s)	1296, 1432
Csp6I	GTAC	4 cut(s)	599, 733, 1243, 1978
CspCI	CAANNNNNGTGG	2 cut(s)	1711, 1746
CviQI	GTAC	4 cut(s)	599, 733, 1243, 1978
DpnI	GATC	8 cut(s)	173, 326, 813, 904, 1315, 1477, 1695, 2064
DpnII	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
DraIII	CACNNNGTG	1 cut(s)	2192
EaeI	YGGCCR	2 cut(s)	389, 2093
Eam1104I	CTCTTC	2 cut(s)	45, 1035
EarI	CTCTTC	2 cut(s)	45, 1035
Eco130I	CCWWGG	5 cut(s)	153, 498, 751, 1559, 1743
Eco32I	GATATC	1 cut(s)	1390
Eco47I	GGWCC	2 cut(s)	1058, 1886
Eco57I	CTGAAG	2 cut(s)	591, 1059
Eco72I	CACGTG	1 cut(s)	722
Eco88I	CYCGRG	1 cut(s)	179
Eco91I	GGTNACC	1 cut(s)	1628
EcoO65I	GGTNACC	1 cut(s)	1628
EcoRII	CCWGG	3 cut(s)	225, 484, 1576
EcoRV	GATATC	1 cut(s)	1390
EcoT14I	CCWWGG	5 cut(s)	153, 498, 751, 1559, 1743
ErhI	CCWWGG	5 cut(s)	153, 498, 751, 1559, 1743
FalI	AAGNNNNNCTT	4 cut(s)	450, 482, 1084, 1116
FaqI	GGGAC	3 cut(s)	566, 1091, 1872
FauI	CCCGC	1 cut(s)	1617
FauNDI	CATATG	1 cut(s)	1837
FbaI	TGATCA	1 cut(s)	324
FokI	GGATG	7 cut(s)	328, 503, 798, 1217, 1625, 1726, 1826
FspBI	CTAG	3 cut(s)	891, 1358, 2245
GlaI	GCGC	1 cut(s)	1375
GsuI	CTGGAG	2 cut(s)	248, 1802
HaeIII	GGCC	5 cut(s)	152, 161, 184, 391, 2095
HapII	CCGG	3 cut(s)	18, 162, 175
HgaI	GACGC	2 cut(s)	1296, 1432
HhaI	GCGC	1 cut(s)	1376
Hin6I	GCGC	1 cut(s)	1374
HinP1I	GCGC	1 cut(s)	1374
HindIII	AAGCTT	1 cut(s)	677
HinfI	GANTC	9 cut(s)	35, 137, 355, 385, 537, 1518, 1936, 2162, 2241
HpaII	CCGG	3 cut(s)	18, 162, 175
HphI	GGTGA	3 cut(s)	59, 656, 2153
Hpy166II	GTNNAC	5 cut(s)	441, 733, 1013, 1245, 1822
Hpy188I	TCNGA	9 cut(s)	34, 337, 354, 645, 993, 1318, 1330, 1422, 1523
Hpy188III	TCNNGA	4 cut(s)	124, 551, 1037, 1385
Hpy8I	GTNNAC	5 cut(s)	441, 733, 1013, 1245, 1822
HpyAV	CCTTC	5 cut(s)	259, 960, 1610, 1854, 2028
HpyCH4III	ACNGT	4 cut(s)	241, 1242, 1303, 1325
HpyCH4IV	ACGT	2 cut(s)	721, 1792
HpyF10VI	GCNNNNNNNGC	4 cut(s)	158, 566, 617, 1745
HpySE526I	ACGT	2 cut(s)	721, 1792
HspAI	GCGC	1 cut(s)	1374
Ksp22I	TGATCA	1 cut(s)	324
Kzo9I	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
LmnI	GCTCC	9 cut(s)	164, 229, 268, 337, 427, 583, 1097, 1130, 1783
LweI	GCATC	6 cut(s)	306, 1213, 1390, 1556, 1748, 2170
MaeI	CTAG	3 cut(s)	891, 1358, 2245
MaeII	ACGT	2 cut(s)	721, 1792
MaeIII	GTNAC	7 cut(s)	241, 507, 1438, 1628, 1733, 1863, 2141
MalI	GATC	8 cut(s)	173, 326, 813, 904, 1315, 1477, 1695, 2064
MboI	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
MboII	GAAGA	8 cut(s)	62, 67, 227, 683, 1052, 1101, 1688, 2057
MfeI	CAATTG	1 cut(s)	1671
MflI	RGATCY	5 cut(s)	811, 902, 1313, 1475, 1693
MlsI	TGGCCA	1 cut(s)	2095
MluI	ACGCGT	1 cut(s)	1288
MluNI	TGGCCA	1 cut(s)	2095
MlyI	GAGTC	4 cut(s)	44, 146, 1930, 2235
MmeI	TCCRAC	4 cut(s)	315, 1791, 1821, 2218
Mox20I	TGGCCA	1 cut(s)	2095
MroXI	GAANNNNTTC	1 cut(s)	639
MscI	TGGCCA	1 cut(s)	2095
MseI	TTAA	7 cut(s)	804, 987, 1017, 1023, 1085, 1902, 1989
MslI	CAYNNNNRTG	3 cut(s)	720, 1829, 1895
Msp20I	TGGCCA	1 cut(s)	2095
MspA1I	CMGCKG	4 cut(s)	481, 560, 569, 2216
MspCI	CTTAAG	1 cut(s)	1016
MspI	CCGG	3 cut(s)	18, 162, 175
MspR9I	CCNGG	3 cut(s)	227, 486, 1578
MunI	CAATTG	1 cut(s)	1671
Mva1269I	GAATGC	1 cut(s)	652
MvaI	CCWGG	3 cut(s)	227, 486, 1578
MvnI	CGCG	1 cut(s)	1290
MwoI	GCNNNNNNNGC	4 cut(s)	158, 566, 617, 1745
NcoI	CCATGG	1 cut(s)	498
NdeI	CATATG	1 cut(s)	1837
NdeII	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
NlaIV	GGNNCC	6 cut(s)	522, 709, 948, 963, 1785, 1888
NmuCI	GTSAC	4 cut(s)	241, 507, 1438, 2141
NspI	RCATGY	1 cut(s)	1171
NspV	TTCGAA	1 cut(s)	2107
OliI	CACNNNNGTG	1 cut(s)	720
PctI	GAATGC	1 cut(s)	652
PdmI	GAANNNNTTC	1 cut(s)	639
PfeI	GAWTC	5 cut(s)	355, 385, 537, 1518, 2162
PflMI	CCANNNNNTGG	3 cut(s)	226, 469, 2237
PfoI	TCCNGGA	1 cut(s)	225
PleI	GAGTC	4 cut(s)	43, 145, 1930, 2235
PmaCI	CACGTG	1 cut(s)	722
PmlI	CACGTG	1 cut(s)	722
PpsI	GAGTC	4 cut(s)	43, 145, 1930, 2235
Ppu21I	YACGTR	1 cut(s)	722
PshBI	ATTAAT	1 cut(s)	1989
PsiI	TTATAA	1 cut(s)	345
Psp6I	CCWGG	3 cut(s)	225, 484, 1576
PspCI	CACGTG	1 cut(s)	722
PspEI	GGTNACC	1 cut(s)	1628
PspGI	CCWGG	3 cut(s)	225, 484, 1576
PspN4I	GGNNCC	6 cut(s)	522, 709, 948, 963, 1785, 1888
PspPI	GGNCC	3 cut(s)	182, 1058, 1886
PstI	CTGCAG	1 cut(s)	1652
PsuI	RGATCY	5 cut(s)	811, 902, 1313, 1475, 1693
PvuII	CAGCTG	4 cut(s)	481, 560, 569, 2216
RsaI	GTAC	4 cut(s)	600, 734, 1244, 1979
RsaNI	GTAC	4 cut(s)	599, 733, 1243, 1978
RseI	CAYNNNNRTG	3 cut(s)	720, 1829, 1895
SaqAI	TTAA	7 cut(s)	804, 987, 1017, 1023, 1085, 1902, 1989
Sau3AI	GATC	8 cut(s)	171, 324, 811, 902, 1313, 1475, 1693, 2062
Sau96I	GGNCC	3 cut(s)	182, 1058, 1886
ScaI	AGTACT	1 cut(s)	1979
SchI	GAGTC	4 cut(s)	44, 146, 1930, 2235
ScrFI	CCNGG	3 cut(s)	227, 486, 1578
SfaNI	GCATC	6 cut(s)	306, 1213, 1390, 1556, 1748, 2170
SfcI	CTRYAG	4 cut(s)	1155, 1648, 1801, 1915
SfiI	GGCCNNNNNGGCC	1 cut(s)	158
SfuI	TTCGAA	1 cut(s)	2107
SinI	GGWCC	2 cut(s)	1058, 1886
SmiMI	CAYNNNNRTG	3 cut(s)	720, 1829, 1895
SmlI	CTYRAG	3 cut(s)	191, 822, 1016
SmoI	CTYRAG	3 cut(s)	191, 822, 1016
SsiI	CCGC	2 cut(s)	884, 1624
SspMI	CTAG	3 cut(s)	891, 1358, 2245
StyD4I	CCNGG	3 cut(s)	225, 484, 1576
StyI	CCWWGG	5 cut(s)	153, 498, 751, 1559, 1743
TaaI	ACNGT	4 cut(s)	241, 1242, 1303, 1325
TaiI	ACGT	2 cut(s)	724, 1795
TaqI	TCGA	4 cut(s)	111, 852, 1993, 2107
TaqII	GACCGA	1 cut(s)	1840
TatI	WGTACW	3 cut(s)	732, 1242, 1977
TfiI	GAWTC	5 cut(s)	355, 385, 537, 1518, 2162
Tru1I	TTAA	7 cut(s)	804, 987, 1017, 1023, 1085, 1902, 1989
Tru9I	TTAA	7 cut(s)	804, 987, 1017, 1023, 1085, 1902, 1989
TscAI	CASTG	4 cut(s)	1252, 1306, 1443, 1777
TseFI	GTSAC	4 cut(s)	241, 507, 1438, 2141
Tsp45I	GTSAC	4 cut(s)	241, 507, 1438, 2141
TspRI	CASTG	4 cut(s)	1252, 1306, 1443, 1777
Van91I	CCANNNNNTGG	3 cut(s)	226, 469, 2237
Vha464I	CTTAAG	1 cut(s)	1016
VpaK11BI	GGWCC	2 cut(s)	1058, 1886
VspI	ATTAAT	1 cut(s)	1989
XapI	RAATTY	1 cut(s)	1277
XceI	RCATGY	1 cut(s)	1171
XcmI	CCANNNNNNNNNTGG	2 cut(s)	758, 1777
XmnI	GAANNNNTTC	1 cut(s)	639
XspI	CTAG	3 cut(s)	891, 1358, 2245
ZrmI	AGTACT	1 cut(s)	1979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.