Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0011226

Physical Location & Seq

Genomic Coordinates Reverse (-)

25126305 .. 25132135

Gene Structure 5831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1113100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAGGCTGCTGAAGGTCGCAACCTGTAATTTGAACCAATGGGCTATGGATTACGACTGCAATATGAACAACATCAAGGAGTCGATAGCTCGGGCTAAGGAGGCCGGCGCCGTGATTCGTCTAGGTCCGGAGCTTGAGATCACTGGCTATGGCTGCGAAGACCATTTCCTCGAGCTTGACACTGTTAATCATGCATGGGAATGCTTGAAAGAGCTGTTAGTTGGGGATTGGACTGATGGCATATTGTGCAGCTTTGGGATGCCTGTGATCAAAGGGTCGGAGCGTTACAACTGTCAGATAATTTGTATGAACAGAAAGATTATCATGATACGCCCGAAAATGTGGCTTGCGAATGATGGTAATTACAGGGAACTTCGTTGGTTTACGGCGTGGAAACAAAGAGACCAACTTGTGGACTTTCAGTTGCCAAATGAAATTTCTGAGACTTTGTCGCAGGAATCCGTGCCTTTCGGTTATGGGTACATACAGTTTCTAGACACAGCTGTTGCTGCTGAAATTTGTGAAGAACTTTTTACTCCTAGTCCTCCTCATGCCGAGCTTGCATTGAATGGGGTTGAAGTTTTTATGAATGCAAGTGGGAGTCATCACCAACTTAGAAAGCTTGATATTCGCCTTCGTGCTTTTATAGGCGCTACTCACACTCGTGGAGGAGTGTACATGTACAGCAATCAACAGGGCTGTGATGGTGGTCGCCTTTACTATGATGGATGTGCTAGTGTCGTCGTAAATGGAGATGTAGTTGCTCAAGGCTCACAATTTTCTTTGAAGGATGTTGAGGTTGTGATTGCCCAAATTGATTTAGAAGCGGTTGCTAGTCTTAGAGGATCGATAAGTAGCTTCCAAGAGCAAGCGAGCTGCAAAACCAGGGTTCCTTTCGTGGAGGCACGATACAACCTTTGTCAGTCTTTTAATCTGAAAATGTGCCTTTCTAGTCCTCTGAAGATTAAGTATCACTCTCCTGAGGAGGAAATAGCCTTTGGTCCTTGTTGCTGGCTATGGGACTATTTAAGAAGAAGTGGAGCTTCTGGGTTTCTGCTTCCTCTTTCTGGTGGAGCTGATAGCTCCTCAGTAGCTGCGATAGTTGGTTGCATGTGCCAGCTTGTAGTAAAAGAAATTGCAAACGGGGATGAACAAGTCAAAGCTGACGCAATACGGATTGGACAATACAAGAATGGACAGTATCCTACTGACAGCAACGAATTCGCAAAACGCGTATTTTATACTGTTTTTATGGGATCTGAAAACAGCTCTGAAGTAACAAAGTCACGGGCGAAAGTTCTAGCAGATGAAATTGGCTCATGGCATCTTGACGTTCCCATAGATGGTGTTGTTTCCGCACTTCTGTCGTTGTTTCAAACAGTAACAGGAAAACGACCAAAATACAAGGTAGATGGCGGATCTAACAGTGAGAACTTAGGTTTGCAAAACATTCAAGCTAGAATAAGGATGGTGCTGGCTTTCATGTTTGCATCACTACTACCTTGGGTTCATAACAAACCTGGGTTTTATCTTGTTTTGGGTAGCTCCAATGTGGATGAAGCATTGCGTGGTTATCTCACCAAGTATGACTGCAGCGCAGCTGATATAAATCCTATTGGAAGCATTAGTAAGCAGGATCTTCGGGCATTTTTGCGATGGGCTGCCACGCATCTTAGTTATGCTTCACTGGCAGATATTGAAGCAGCTCCACCCACTGCTGAACTGGAGCCTATACGTTCCAATTATAGTCAGCTGGATGAAGTAGACATGGGAATGACATATGAGGAACTCTCCGTCTATGGAAGGATGCGCAAAATTTTCCGCTGTGGTCCCATGTCCATGTTCAAGAATCTCTGCTACAGATGGGGTGCAAAATTGACTCCAGGAGAAGTGGCCGAGAAAGTGAAGCACTTTTTCAAGTACTACTCTATCAATCGACACAAAATGACCGTATTAACACCTTCCTATCACGCCGAGAGTTATTCACCCGAGGATAATCGGTTTGACCTTCGCCAATTTTTATACAATGCGAGATGGCCATATCAGTTCCGGAAGATTGATGATCTCGTACGTGAGTTGGGCGGTGACAGGGTTCATTTGGGAGATTCAAGTGACCAAGACCAGTTGGTTCATGCTCCACATGGTGCAGGTGGGATGGGAGTTGTGGCAGCAGGCTCAGGCAATCCAAATGTTGGACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003952 GO:0004359 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009987 GO:0016787 GO:0016810 GO:0016811 GO:0016874 GO:0016879 GO:0016884 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

CN_hydrolase NAD_synthase

Protein Analysis

734

Amino Acids

81.88

Weight (kDa)

5.95

Isoelectric Point (pI)

41.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CN_hydrolase	PF00795	5 - 281	5.9e-32	Carbon-nitrogen hydrolase
NAD_synthase	PF02540	337 - 598	3.4e-27	NAD synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55090
fragaria_vesca	FvH4_5g11490 FvH4_5g11490 FvH4_5g11490
malus_domestica	MD06G1113100.v1.1 MD14G1134200.v1.1
prunus_persica	Prupe.5G126000_v2.0.a1
pyrus_communis	pycom06g10580
rosa_chinensis	RchiOBHm_Chr7g0186311
rosa_laevigata	RLG00000004850
rosa_multiflora	Rmu_sc0000645.1_g000051
rosa_roxburghii	Rroxscaffold_3G00268230
rosa_rugosa	Rorug06G0473200 Rorug06G0473300 Rorug06G0473400 Rorug06G0473400
rosa_samantha	Rh7AG067800 Rh7BG083600 Rh7DG080800
rosa_wichuraiana	Rw7G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2138
Acc16I	TGCGCA	1 cut(s)	1811
Acc36I	ACCTGC	1 cut(s)	2138
AccB1I	GGYRCC	1 cut(s)	107
AccB7I	CCANNNNNTGG	2 cut(s)	412, 2192
AccI	GTMKAC	1 cut(s)	1764
AccII	CGCG	1 cut(s)	1233
AccIII	TCCGGA	2 cut(s)	127, 2049
AciI	CCGC	5 cut(s)	827, 1356, 1416, 1822, 2082
AclWI	GGATC	4 cut(s)	853, 1264, 1426, 1644
AcoI	YGGCCR	2 cut(s)	1893, 2036
AcsI	RAATTY	4 cut(s)	435, 516, 1220, 1815
AcuI	CTGAAG	3 cut(s)	32, 980, 1293
AcyI	GRCGYC	1 cut(s)	108
AdeI	CACNNNGTG	1 cut(s)	2144
AfaI	GTAC	5 cut(s)	482, 677, 683, 1922, 2070
AfiI	CCNNNNNNNGG	4 cut(s)	412, 1067, 1343, 2192
AflIII	ACRYGT	2 cut(s)	678, 1231
AjnI	CCWGG	3 cut(s)	884, 1519, 1882
AjuI	GAANNNNNNNTTGG	4 cut(s)	421, 453, 981, 1013
AleI	CACNNNNGTG	1 cut(s)	663
Alw26I	GTCTC	2 cut(s)	396, 437
AlwI	GGATC	4 cut(s)	853, 1264, 1426, 1644
AlwNI	CAGNNNCTG	1 cut(s)	1094
Ama87I	CYCGRG	3 cut(s)	90, 170, 1988
Aor13HI	TCCGGA	2 cut(s)	127, 2049
AoxI	GGCC	3 cut(s)	102, 1893, 2036
ApoI	RAATTY	4 cut(s)	435, 516, 1220, 1815
AspLEI	GCGC	4 cut(s)	110, 653, 1598, 1812
AspS9I	GGNCC	3 cut(s)	125, 1001, 1829
AsuHPI	GGTGA	4 cut(s)	599, 1570, 1977, 2096
AvaI	CYCGRG	3 cut(s)	90, 170, 1988
AvaII	GGWCC	3 cut(s)	125, 1001, 1829
AxyI	CCTNAGG	1 cut(s)	981
BalI	TGGCCA	1 cut(s)	2038
BanI	GGYRCC	1 cut(s)	107
BauI	CACGAG	1 cut(s)	663
BbsI	GAAGAC	1 cut(s)	165
BceAI	ACGGC	2 cut(s)	95, 402
BcgI	CGANNNNNNTGC	6 cut(s)	1204, 1238, 1347, 1381, 1622, 1656
BciT130I	CCWGG	3 cut(s)	886, 1521, 1884
BciVI	GTATCC	1 cut(s)	1212
BclI	TGATCA	1 cut(s)	267
BcoDI	GTCTC	2 cut(s)	396, 437
BfaI	CTAG	9 cut(s)	122, 494, 540, 735, 834, 951, 1301, 1458, 2200
BfmI	CTRYAG	2 cut(s)	1591, 1858
BfoI	RGCGCY	2 cut(s)	111, 654
BfuAI	ACCTGC	1 cut(s)	2138
BfuI	GTATCC	1 cut(s)	1212
BmcAI	AGTACT	1 cut(s)	1922
Bme1390I	CCNGG	3 cut(s)	886, 1521, 1884
Bme18I	GGWCC	3 cut(s)	125, 1001, 1829
BmeT110I	CYCGRG	3 cut(s)	90, 170, 1988
BmgT120I	GGNCC	3 cut(s)	125, 1001, 1829
BmiI	GGNNCC	4 cut(s)	109, 891, 1728, 1831
BmrFI	CCNGG	3 cut(s)	886, 1521, 1884
BmsI	GCATC	5 cut(s)	249, 1333, 1499, 1678, 1797
BpiI	GAAGAC	1 cut(s)	165
BplI	GAGNNNNNCTC	2 cut(s)	1775, 1807
BpmI	CTGGAG	2 cut(s)	1745, 1866
Bpu10I	CCTNAGC	2 cut(s)	96, 2176
BpuEI	CTTGAG	2 cut(s)	155, 750
Bsa29I	ATCGAT	1 cut(s)	848
BsaAI	YACGTR	1 cut(s)	2072
BsaBI	GATNNNNATC	1 cut(s)	1608
BsaHI	GRCGYC	1 cut(s)	108
BsaI	GGTCTC	1 cut(s)	396
BsaJI	CCNNGG	4 cut(s)	885, 1502, 1520, 1989
BsaWI	WCCGGW	2 cut(s)	127, 2049
BsaXI	ACNNNNNCTCC	2 cut(s)	744, 774
Bsc4I	CCNNNNNNNGG	4 cut(s)	412, 1067, 1343, 2192
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	4 cut(s)	148, 1692, 1728, 2122
Bse21I	CCTNAGG	1 cut(s)	981
Bse3DI	GCAATG	1 cut(s)	1562
Bse8I	GATNNNNATC	1 cut(s)	1608
BseAI	TCCGGA	2 cut(s)	127, 2049
BseBI	CCWGG	3 cut(s)	886, 1521, 1884
BseCI	ATCGAT	1 cut(s)	848
BseDI	CCNNGG	4 cut(s)	885, 1502, 1520, 1989
BseGI	GGATG	9 cut(s)	264, 734, 796, 1153, 1473, 1561, 1762, 1812, 2160
BseJI	GATNNNNATC	1 cut(s)	1608
BseLI	CCNNNNNNNGG	4 cut(s)	412, 1067, 1343, 2192
BseMI	GCAATG	1 cut(s)	1562
BseMII	CTCAG	4 cut(s)	432, 972, 1101, 2190
BseNI	ACTGG	4 cut(s)	148, 1692, 1728, 2122
BseRI	GAGGAG	4 cut(s)	537, 684, 998, 1075
BsgI	GTGCAG	2 cut(s)	268, 2166
Bsh1236I	CGCG	1 cut(s)	1233
BshFI	GGCC	3 cut(s)	104, 1895, 2038
BshNI	GGYRCC	1 cut(s)	107
BshVI	ATCGAT	1 cut(s)	848
BsiHKCI	CYCGRG	3 cut(s)	90, 170, 1988
BsiSI	CCGG	3 cut(s)	105, 128, 2050
BsiWI	CGTACG	1 cut(s)	2068
BslFI	GGGAC	2 cut(s)	1034, 1815
BslI	CCNNNNNNNGG	4 cut(s)	412, 1067, 1343, 2192
BsmAI	GTCTC	2 cut(s)	396, 437
BsmFI	GGGAC	2 cut(s)	1034, 1815
BsmI	GAATGC	2 cut(s)	206, 595
BsnI	GGCC	3 cut(s)	104, 1895, 2038
Bso31I	GGTCTC	1 cut(s)	396
BsoBI	CYCGRG	3 cut(s)	90, 170, 1988
Bsp13I	TCCGGA	2 cut(s)	127, 2049
Bsp1407I	TGTACA	2 cut(s)	675, 681
Bsp143I	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
BspACI	CCGC	5 cut(s)	827, 1356, 1416, 1822, 2082
BspANI	GGCC	3 cut(s)	104, 1895, 2038
BspCNI	CTCAG	4 cut(s)	433, 973, 1100, 2189
BspDI	ATCGAT	1 cut(s)	848
BspEI	TCCGGA	2 cut(s)	127, 2049
BspFNI	CGCG	1 cut(s)	1233
BspHI	TCATGA	1 cut(s)	324
BspLI	GGNNCC	4 cut(s)	109, 891, 1728, 1831
BspMAI	CTGCAG	1 cut(s)	1595
BspMI	ACCTGC	1 cut(s)	2138
BspPI	GGATC	4 cut(s)	853, 1264, 1426, 1644
BspT107I	GGYRCC	1 cut(s)	107
BspTNI	GGTCTC	1 cut(s)	396
BsrDI	GCAATG	1 cut(s)	1562
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	2 cut(s)	675, 681
BsrI	ACTGG	4 cut(s)	148, 1692, 1728, 2122
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	4 cut(s)	885, 1502, 1520, 1989
BssMI	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
BssNI	GRCGYC	1 cut(s)	108
BssSI	CACGAG	1 cut(s)	663
BssT1I	CCWWGG	1 cut(s)	1502
Bst2BI	CACGAG	1 cut(s)	663
Bst2UI	CCWGG	3 cut(s)	886, 1521, 1884
Bst4CI	ACNGT	8 cut(s)	184, 293, 489, 1200, 1246, 1381, 1427, 1951
BstACI	GRCGYC	1 cut(s)	108
BstAPI	GCANNNNNTGC	1 cut(s)	246
BstAUI	TGTACA	2 cut(s)	675, 681
BstBAI	YACGTR	1 cut(s)	2072
BstC8I	GCNNGC	9 cut(s)	106, 348, 561, 870, 874, 1013, 1118, 1476, 2173
BstDEI	CTNAG	9 cut(s)	96, 441, 614, 839, 981, 1087, 1435, 1673, 2176
BstF5I	GGATG	9 cut(s)	264, 734, 796, 1153, 1473, 1561, 1762, 1812, 2160
BstFNI	CGCG	1 cut(s)	1233
BstH2I	RGCGCY	2 cut(s)	111, 654
BstHHI	GCGC	4 cut(s)	110, 653, 1598, 1812
BstKTI	GATC	7 cut(s)	141, 270, 848, 1259, 1421, 1639, 2065
BstMAI	GTCTC	2 cut(s)	396, 437
BstMBI	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
BstMWI	GCNNNNNNNGC	6 cut(s)	101, 153, 246, 509, 560, 1688
BstNI	CCWGG	3 cut(s)	886, 1521, 1884
BstNSI	RCATGY	2 cut(s)	682, 1114
BstSCI	CCNGG	3 cut(s)	884, 1519, 1882
BstSFI	CTRYAG	2 cut(s)	1591, 1858
BstUI	CGCG	1 cut(s)	1233
BstV2I	GAAGAC	1 cut(s)	165
BstX2I	RGATCY	3 cut(s)	1256, 1418, 1636
BstYI	RGATCY	3 cut(s)	1256, 1418, 1636
Bsu15I	ATCGAT	1 cut(s)	848
Bsu36I	CCTNAGG	1 cut(s)	981
BsuI	GTATCC	1 cut(s)	1212
BsuRI	GGCC	3 cut(s)	104, 1895, 2038
BsuTUI	ATCGAT	1 cut(s)	848
BtgZI	GCGATG	1 cut(s)	1669
BtsCI	GGATG	9 cut(s)	264, 734, 796, 1153, 1473, 1561, 1762, 1812, 2160
BtsI	GCAGTG	1 cut(s)	1713
BtsIMutI	CAGTG	5 cut(s)	141, 180, 1432, 1685, 1713
BveI	ACCTGC	1 cut(s)	2138
Cac8I	GCNNGC	9 cut(s)	106, 348, 561, 870, 874, 1013, 1118, 1476, 2173
CaiI	CAGNNNCTG	1 cut(s)	1094
CciI	TCATGA	1 cut(s)	324
CfoI	GCGC	4 cut(s)	110, 653, 1598, 1812
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	3 cut(s)	125, 1001, 1829
ClaI	ATCGAT	1 cut(s)	848
CseI	GACGC	1 cut(s)	1175
Csp6I	GTAC	5 cut(s)	481, 676, 682, 1921, 2069
CviQI	GTAC	5 cut(s)	481, 676, 682, 1921, 2069
DdeI	CTNAG	9 cut(s)	96, 441, 614, 839, 981, 1087, 1435, 1673, 2176
DinI	GGCGCC	1 cut(s)	109
DpnI	GATC	7 cut(s)	140, 269, 847, 1258, 1420, 1638, 2064
DpnII	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
DraIII	CACNNNGTG	1 cut(s)	2144
EaeI	YGGCCR	2 cut(s)	1893, 2036
EciI	GGCGGA	1 cut(s)	1431
Eco130I	CCWWGG	1 cut(s)	1502
Eco31I	GGTCTC	1 cut(s)	396
Eco47I	GGWCC	3 cut(s)	125, 1001, 1829
Eco57I	CTGAAG	3 cut(s)	32, 980, 1293
Eco81I	CCTNAGG	1 cut(s)	981
Eco88I	CYCGRG	3 cut(s)	90, 170, 1988
EcoRI	GAATTC	1 cut(s)	1220
EcoRII	CCWGG	3 cut(s)	884, 1519, 1882
EcoT14I	CCWWGG	1 cut(s)	1502
EcoT22I	ATGCAT	1 cut(s)	196
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	1 cut(s)	1502
FalI	AAGNNNNNCTT	2 cut(s)	1027, 1059
FaqI	GGGAC	2 cut(s)	1034, 1815
FauNDI	CATATG	1 cut(s)	1780
FbaI	TGATCA	1 cut(s)	267
FblI	GTMKAC	1 cut(s)	1764
FokI	GGATG	9 cut(s)	271, 741, 803, 1160, 1480, 1568, 1769, 1819, 2167
FspBI	CTAG	9 cut(s)	122, 494, 540, 735, 834, 951, 1301, 1458, 2200
FspI	TGCGCA	1 cut(s)	1811
GlaI	GCGC	4 cut(s)	109, 652, 1597, 1811
GsuI	CTGGAG	2 cut(s)	1745, 1866
HaeII	RGCGCY	2 cut(s)	111, 654
HaeIII	GGCC	3 cut(s)	104, 1895, 2038
HapII	CCGG	3 cut(s)	105, 128, 2050
HgaI	GACGC	1 cut(s)	1175
HhaI	GCGC	4 cut(s)	110, 653, 1598, 1812
Hin1I	GRCGYC	1 cut(s)	108
Hin6I	GCGC	4 cut(s)	108, 651, 1596, 1810
HinP1I	GCGC	4 cut(s)	108, 651, 1596, 1810
HindIII	AAGCTT	1 cut(s)	620
HinfI	GANTC	8 cut(s)	80, 115, 458, 601, 1849, 1879, 2105, 2196
HpaII	CCGG	3 cut(s)	105, 128, 2050
HphI	GGTGA	4 cut(s)	599, 1570, 1977, 2096
Hpy166II	GTNNAC	4 cut(s)	384, 415, 676, 1765
Hpy188I	TCNGA	7 cut(s)	280, 297, 442, 936, 960, 1261, 1273
Hpy188III	TCNNGA	7 cut(s)	128, 325, 494, 980, 1328, 1846, 2050
Hpy8I	GTNNAC	4 cut(s)	384, 415, 676, 1765
Hpy99I	CGWCG	1 cut(s)	746
HpyAV	CCTTC	6 cut(s)	7, 644, 781, 1797, 1971, 2018
HpyCH4III	ACNGT	8 cut(s)	184, 293, 489, 1200, 1246, 1381, 1427, 1951
HpyCH4IV	ACGT	3 cut(s)	1332, 1735, 2071
HpyF10VI	GCNNNNNNNGC	6 cut(s)	101, 153, 246, 509, 560, 1688
HpyF3I	CTNAG	9 cut(s)	96, 441, 614, 839, 981, 1087, 1435, 1673, 2176
HpySE526I	ACGT	3 cut(s)	1332, 1735, 2071
Hsp92I	GRCGYC	1 cut(s)	108
HspAI	GCGC	4 cut(s)	108, 651, 1596, 1810
KasI	GGCGCC	1 cut(s)	107
Kpn2I	TCCGGA	2 cut(s)	127, 2049
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	1 cut(s)	267
Kzo9I	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
LmnI	GCTCC	9 cut(s)	130, 280, 1040, 1073, 1088, 1550, 1711, 1726, 2140
LweI	GCATC	5 cut(s)	249, 1333, 1499, 1678, 1797
MaeI	CTAG	9 cut(s)	122, 494, 540, 735, 834, 951, 1301, 1458, 2200
MaeII	ACGT	3 cut(s)	1332, 1735, 2071
MaeIII	GTNAC	6 cut(s)	284, 1276, 1284, 1381, 2084, 2111
MalI	GATC	7 cut(s)	140, 269, 847, 1258, 1420, 1638, 2064
MboI	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
MboII	GAAGA	6 cut(s)	170, 536, 973, 1044, 1631, 2065
MflI	RGATCY	3 cut(s)	1256, 1418, 1636
MlsI	TGGCCA	1 cut(s)	2038
MluI	ACGCGT	1 cut(s)	1231
MluNI	TGGCCA	1 cut(s)	2038
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	4 cut(s)	89, 610, 1873, 2190
MmeI	TCCRAC	2 cut(s)	258, 2173
Mox20I	TGGCCA	1 cut(s)	2038
Mph1103I	ATGCAT	1 cut(s)	196
MroI	TCCGGA	2 cut(s)	127, 2049
MroNI	GCCGGC	1 cut(s)	104
MscI	TGGCCA	1 cut(s)	2038
MseI	TTAA	5 cut(s)	186, 930, 966, 1028, 1955
MslI	CAYNNNNRTG	4 cut(s)	199, 663, 1772, 1838
Msp20I	TGGCCA	1 cut(s)	2038
MspA1I	CMGCKG	4 cut(s)	503, 1601, 1753, 1824
MspI	CCGG	3 cut(s)	105, 128, 2050
MspR9I	CCNGG	3 cut(s)	886, 1521, 1884
Mva1269I	GAATGC	2 cut(s)	206, 595
MvaI	CCWGG	3 cut(s)	886, 1521, 1884
MvnI	CGCG	1 cut(s)	1233
MwoI	GCNNNNNNNGC	6 cut(s)	101, 153, 246, 509, 560, 1688
NaeI	GCCGGC	1 cut(s)	106
NarI	GGCGCC	1 cut(s)	108
NdeI	CATATG	1 cut(s)	1780
NdeII	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
NgoMIV	GCCGGC	1 cut(s)	104
NlaIV	GGNNCC	4 cut(s)	109, 891, 1728, 1831
NmeAIII	GCCGAG	3 cut(s)	580, 1921, 1999
NmuCI	GTSAC	3 cut(s)	1284, 2084, 2111
NsbI	TGCGCA	1 cut(s)	1811
NsiI	ATGCAT	1 cut(s)	196
NspI	RCATGY	2 cut(s)	682, 1114
OliI	CACNNNNGTG	1 cut(s)	663
PaeR7I	CTCGAG	1 cut(s)	170
PagI	TCATGA	1 cut(s)	324
PaqCI	CACCTGC	1 cut(s)	2138
PciI	ACATGT	1 cut(s)	678
PcsI	WCGNNNNNNNCGW	1 cut(s)	1230
PctI	GAATGC	2 cut(s)	206, 595
PdiI	GCCGGC	1 cut(s)	106
PfeI	GAWTC	4 cut(s)	115, 458, 1849, 2105
Pfl23II	CGTACG	1 cut(s)	2068
PflFI	GACNNNGTC	1 cut(s)	448
PflMI	CCANNNNNTGG	2 cut(s)	412, 2192
PfoI	TCCNGGA	1 cut(s)	1882
PleI	GAGTC	4 cut(s)	88, 609, 1873, 2190
PluTI	GGCGCC	1 cut(s)	111
PpsI	GAGTC	4 cut(s)	88, 609, 1873, 2190
Ppu21I	YACGTR	1 cut(s)	2072
PscI	ACATGT	1 cut(s)	678
Psp6I	CCWGG	3 cut(s)	884, 1519, 1882
PspGI	CCWGG	3 cut(s)	884, 1519, 1882
PspLI	CGTACG	1 cut(s)	2068
PspN4I	GGNNCC	4 cut(s)	109, 891, 1728, 1831
PspPI	GGNCC	3 cut(s)	125, 1001, 1829
PspXI	VCTCGAGB	1 cut(s)	170
PstI	CTGCAG	1 cut(s)	1595
PstNI	CAGNNNCTG	1 cut(s)	1094
PsuI	RGATCY	3 cut(s)	1256, 1418, 1636
PsyI	GACNNNGTC	1 cut(s)	448
PvuII	CAGCTG	3 cut(s)	503, 1601, 1753
RsaI	GTAC	5 cut(s)	482, 677, 683, 1922, 2070
RsaNI	GTAC	5 cut(s)	481, 676, 682, 1921, 2069
RseI	CAYNNNNRTG	4 cut(s)	199, 663, 1772, 1838
SaqAI	TTAA	5 cut(s)	186, 930, 966, 1028, 1955
Sau3AI	GATC	7 cut(s)	138, 267, 845, 1256, 1418, 1636, 2062
Sau96I	GGNCC	3 cut(s)	125, 1001, 1829
ScaI	AGTACT	1 cut(s)	1922
SchI	GAGTC	4 cut(s)	89, 610, 1873, 2190
ScrFI	CCNGG	3 cut(s)	886, 1521, 1884
SfaNI	GCATC	5 cut(s)	249, 1333, 1499, 1678, 1797
SfcI	CTRYAG	2 cut(s)	1591, 1858
SfoI	GGCGCC	1 cut(s)	109
Sfr274I	CTCGAG	1 cut(s)	170
SinI	GGWCC	3 cut(s)	125, 1001, 1829
SlaI	CTCGAG	1 cut(s)	170
SmiMI	CAYNNNNRTG	4 cut(s)	199, 663, 1772, 1838
SmlI	CTYRAG	3 cut(s)	134, 170, 765
SmoI	CTYRAG	3 cut(s)	134, 170, 765
SsiI	CCGC	5 cut(s)	827, 1356, 1416, 1822, 2082
SspDI	GGCGCC	1 cut(s)	107
SspMI	CTAG	9 cut(s)	122, 494, 540, 735, 834, 951, 1301, 1458, 2200
StyD4I	CCNGG	3 cut(s)	884, 1519, 1882
StyI	CCWWGG	1 cut(s)	1502
TaaI	ACNGT	8 cut(s)	184, 293, 489, 1200, 1246, 1381, 1427, 1951
TaiI	ACGT	3 cut(s)	1335, 1738, 2074
TaqI	TCGA	4 cut(s)	83, 171, 848, 1936
TatI	WGTACW	3 cut(s)	675, 681, 1920
TfiI	GAWTC	4 cut(s)	115, 458, 1849, 2105
Tru1I	TTAA	5 cut(s)	186, 930, 966, 1028, 1955
Tru9I	TTAA	5 cut(s)	186, 930, 966, 1028, 1955
TscAI	CASTG	5 cut(s)	148, 187, 1432, 1692, 1720
TseFI	GTSAC	3 cut(s)	1284, 2084, 2111
Tsp45I	GTSAC	3 cut(s)	1284, 2084, 2111
TspGWI	ACGGA	3 cut(s)	451, 1189, 1783
TspRI	CASTG	5 cut(s)	148, 187, 1432, 1692, 1720
Tth111I	GACNNNGTC	1 cut(s)	448
Van91I	CCANNNNNTGG	2 cut(s)	412, 2192
VpaK11BI	GGWCC	3 cut(s)	125, 1001, 1829
XapI	RAATTY	4 cut(s)	435, 516, 1220, 1815
XbaI	TCTAGA	1 cut(s)	493
XceI	RCATGY	2 cut(s)	682, 1114
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1720
XhoI	CTCGAG	1 cut(s)	170
XmiI	GTMKAC	1 cut(s)	1764
XspI	CTAG	9 cut(s)	122, 494, 540, 735, 834, 951, 1301, 1458, 2200
ZrmI	AGTACT	1 cut(s)	1922
Zsp2I	ATGCAT	1 cut(s)	196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.