Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011226

Physical Location & Seq

Genomic Coordinates Forward (+)

59574710 .. 59578233

Gene Structure 3524 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0473400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGTCGGAGCAGAGATCCGGGTTAAGAATCCGAGACGCCAGCCCGGACTCGGTTATTTACACACTCGAGTCCAGCCTCTTCTCCTCTTCCGCTTCCGCCAGCGTTGACCGCTGCTCCTTCGCTTCCGAAGCCCTTGACCACGACTCCACCGCCTCCGAGATCTCTCCGAACTCGGCGGCGCACCGTCACCAGCTTGAAGAGAGCTCCAGTGGTCCGGATCGCGATACAGATCCGAAGACGAAGCCCGCTTTACACATCACCAGCCACCACCAGGGTCGTCGATCCAGAAAAGGAGAAAAGGCCAAAGCTTGCACAGTTCAAAAGCAAGACAACGACGCCGACTTGGTTCTTGATTCAGCACGAAGCTCTTTCTCTCTCGCCTTGAAAGAATGCCAGGACCGTCGATCTAGATCTGAAGCTCTGTCCAAGAAGCTAGACCGGCCGAGACCCGCTTCTTTGGATTTGAACAATGTCACCGCCTCGTCTCCGAGATTGGGGACCTTAAAGAAGAGCTCAATGGCGTCTCGCAAGTCTGGAACCTTCCCAAGTCCCGGAACACCTACTTACCGGCATACTAGTCTTGGAGTGCACAAGGGTTGGAGCTCGGAGCGAGTTCCGGCCAATGCTAATTTGGGGGGCAGGAAGAATACAACTGCTGCTGCTATGTTGCCATTCAACAATGGGAGGACGTTGCCGTCGAAATGGGAAGATGCAGAGAGGTGGATTTTCAGTCCGGTTCAGGGGCAGTCGAATCAGCAGGCCCAGAGGAGGCCCAAGGCGAAGAGTGGTCCGCTCGGCCCTCCTGGAGTTGCATATTATTCATTGTATTCACCAGCAATGCCGATGTTTGATGGAGGTAGCGTTCCTAATTTCATGGCTGGTTCTCCGTTTTCAGCTGGGGTTATGGCAGCGGATGGAATGGCATTCCACTCCTCCGGTGCTCATAATGGAGCCTTTTCCAATAGGGCTGAGCCTTTCATTGCTCGTTCGGTTAGCGTGCATGGTTGCTCTGAGGTGTTGGACCAGCAGTCATCCCTGCCTGAGTCTCAAGATGAAAAGCTTGATGGGGTTAAGGATGCAGCCACCAATGTTTCTCGTGCAGTTTCACGAAGGGACATGGCAACCCAAATGAGCCCTGATGACAGCATTCACTCGTCTCCCAAGGAGGGGCATGATTACTCTGCTTCTACGTCCTCTTTCTTCCCTATTGAGGAAATGCAGAGCGCCCCTTCTTTGAAATTGGAAGTCAGGGATGTGCAGGTAGATGAACGGGTCACTGTGACAAGGTGGTCCAAGAAACATAAAGCCCGAATACCTGGGAAGGGCTCTGATATTGTGGATAGATGGAAAAAGAAAGATGCTGATGTTCGATCTTGTGCTTGGGATCTCTCTGATTCAGCAAAAAACGTTTCAAAAGTTAAAAGAGAGGAAGCTAAAATCGCTGCATGGGAGAATCTGCAGAAGGCAAAAGCTGAGGCAGCAATACGGAAACTAGAGATGAAGCTGGAAAAGAAGAGGTCATCATCCATGGATAAAATTATGAACAAGTTGAGATCAGCTCAGAAAAAAGCTCAAGACATGAGAAGCCTAGTGTCAGACAATCAAGCACATGATGGAAGGAGCTCACATAAAACTTTATCAATTCGTAGGACTCGTCATATGGGTTCTTTTAGTGGTTGCTTTACGTGTCATGCTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003952 GO:0004359 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009987 GO:0016787 GO:0016810 GO:0016811 GO:0016874 GO:0016879 GO:0016884 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

CN_hydrolase NAD_synthase

Protein Analysis

566

Amino Acids

61.89

Weight (kDa)

9.65

Isoelectric Point (pI)

66.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Remorin_C	PF03763	456 - 554	4.3e-24	Remorin, C-terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55090
fragaria_vesca	FvH4_5g11490 FvH4_5g11490 FvH4_5g11490
malus_domestica	MD06G1113100.v1.1 MD14G1134200.v1.1
prunus_persica	Prupe.5G126000_v2.0.a1
pyrus_communis	pycom06g10580
rosa_chinensis	RchiOBHm_Chr7g0186311
rosa_laevigata	RLG00000004850
rosa_multiflora	Rmu_sc0000645.1_g000051
rosa_roxburghii	Rroxscaffold_3G00268230
rosa_rugosa	Rorug06G0473200 Rorug06G0473300 Rorug06G0473400 Rorug06G0473400
rosa_samantha	Rh7AG067800 Rh7BG083600 Rh7DG080800
rosa_wichuraiana	Rw7G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	694, 1288
Acc36I	ACCTGC	1 cut(s)	1249
AccBSI	CCGCTC	1 cut(s)	793
AccII	CGCG	1 cut(s)	222
AccIII	TCCGGA	1 cut(s)	214
AclI	AACGTT	1 cut(s)	1407
AclWI	GGATC	5 cut(s)	9, 224, 225, 276, 1392
AcoI	YGGCCR	2 cut(s)	440, 618
AcuI	CTGAAG	1 cut(s)	435
AcyI	GRCGYC	3 cut(s)	36, 336, 521
AflIII	ACRYGT	1 cut(s)	1685
AgsI	TTSAA	7 cut(s)	197, 320, 385, 466, 676, 1237, 1413
AhdI	GACNNNNNGTC	1 cut(s)	1027
AhlI	ACTAGT	1 cut(s)	575
AjnI	CCWGG	4 cut(s)	270, 393, 802, 1315
AloI	GAACNNNNNNTCC	2 cut(s)	846, 878
Alw21I	GWGCWC	6 cut(s)	206, 515, 591, 605, 943, 1625
Alw26I	GTCTC	6 cut(s)	27, 439, 489, 528, 1050, 1161
Alw44I	GTGCAC	1 cut(s)	587
AlwI	GGATC	5 cut(s)	9, 224, 225, 276, 1392
Ama87I	CYCGRG	1 cut(s)	65
Aor13HI	TCCGGA	1 cut(s)	214
AoxI	GGCC	6 cut(s)	300, 440, 618, 759, 770, 796
ApaLI	GTGCAC	1 cut(s)	587
ApeKI	GCWGC	7 cut(s)	111, 656, 659, 908, 1079, 1442, 1478
AspLEI	GCGC	2 cut(s)	181, 1226
AspS9I	GGNCC	9 cut(s)	212, 397, 498, 760, 771, 788, 797, 1021, 1290
AsuC2I	CCSGG	3 cut(s)	19, 44, 552
AsuHPI	GGTGA	4 cut(s)	179, 250, 466, 822
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	6 cut(s)	212, 397, 498, 788, 1021, 1290
BaeGI	GKGCMC	1 cut(s)	591
BanII	GRGCYC	6 cut(s)	206, 515, 605, 1136, 1328, 1625
BauI	CACGAG	1 cut(s)	1095
BbsI	GAAGAC	1 cut(s)	242
Bbv12I	GWGCWC	6 cut(s)	206, 515, 591, 605, 943, 1625
BbvCI	CCTCAGC	1 cut(s)	1473
BbvI	GCAGC	7 cut(s)	98, 643, 646, 920, 1091, 1429, 1490
BccI	CCATC	5 cut(s)	845, 908, 1058, 1338, 1607
BceAI	ACGGC	1 cut(s)	679
BciT130I	CCWGG	4 cut(s)	272, 395, 804, 1317
BcnI	CCSGG	3 cut(s)	19, 44, 552
BcoDI	GTCTC	6 cut(s)	27, 439, 489, 528, 1050, 1161
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	5 cut(s)	408, 434, 576, 1493, 1589
BfmI	CTRYAG	1 cut(s)	1457
BfoI	RGCGCY	1 cut(s)	1227
BfuAI	ACCTGC	1 cut(s)	1249
BglII	AGATCT	2 cut(s)	159, 410
BisI	GCNGC	8 cut(s)	112, 177, 657, 660, 909, 1080, 1443, 1479
BlpI	GCTNAGC	1 cut(s)	969
BlsI	GCNGC	8 cut(s)	113, 178, 658, 661, 910, 1081, 1444, 1480
Bme1390I	CCNGG	7 cut(s)	19, 44, 272, 395, 552, 804, 1317
Bme18I	GGWCC	6 cut(s)	212, 397, 498, 788, 1021, 1290
BmeRI	GACNNNNNGTC	1 cut(s)	1027
BmeT110I	CYCGRG	1 cut(s)	65
BmgT120I	GGNCC	9 cut(s)	212, 397, 498, 760, 771, 788, 797, 1021, 1290
BmiI	GGNNCC	3 cut(s)	499, 538, 952
BmrFI	CCNGG	7 cut(s)	19, 44, 272, 395, 552, 804, 1317
BmsI	GCATC	3 cut(s)	700, 1066, 1348
BpiI	GAAGAC	1 cut(s)	242
BplI	GAGNNNNNCTC	2 cut(s)	1543, 1575
BpmI	CTGGAG	2 cut(s)	190, 825
Bpu10I	CCTNAGC	1 cut(s)	1473
Bpu1102I	GCTNAGC	1 cut(s)	969
BpuEI	CTTGAG	2 cut(s)	1032, 1557
BpuMI	CCSGG	3 cut(s)	19, 44, 552
BsaAI	YACGTR	1 cut(s)	1686
BsaBI	GATNNNNATC	2 cut(s)	228, 409
BsaHI	GRCGYC	3 cut(s)	36, 336, 521
BsaI	GGTCTC	1 cut(s)	439
BsaJI	CCNNGG	5 cut(s)	271, 774, 1161, 1316, 1527
BsaWI	WCCGGW	3 cut(s)	214, 733, 935
BsaXI	ACNNNNNCTCC	6 cut(s)	98, 128, 128, 158, 846, 876
Bse118I	RCCGGY	2 cut(s)	438, 567
Bse1I	ACTGG	1 cut(s)	207
Bse3DI	GCAATG	2 cut(s)	843, 978
Bse8I	GATNNNNATC	2 cut(s)	228, 409
BseAI	TCCGGA	1 cut(s)	214
BseBI	CCWGG	4 cut(s)	272, 395, 804, 1317
BseDI	CCNNGG	5 cut(s)	271, 774, 1161, 1316, 1527
BseGI	GGATG	5 cut(s)	919, 1031, 1081, 1258, 1523
BseJI	GATNNNNATC	2 cut(s)	228, 409
BseMI	GCAATG	2 cut(s)	843, 978
BseMII	CTCAG	5 cut(s)	960, 1002, 1032, 1464, 1574
BseNI	ACTGG	1 cut(s)	207
BseRI	GAGGAG	3 cut(s)	73, 781, 922
BseSI	GKGCMC	1 cut(s)	591
BseX3I	CGGCCG	1 cut(s)	440
BseXI	GCAGC	7 cut(s)	98, 643, 646, 920, 1091, 1429, 1490
BseYI	CCCAGC	1 cut(s)	896
BsgI	GTGCAG	2 cut(s)	1119, 1277
Bsh1236I	CGCG	1 cut(s)	222
Bsh1285I	CGRYCG	1 cut(s)	443
BshFI	GGCC	6 cut(s)	302, 442, 620, 761, 772, 798
BsiEI	CGRYCG	1 cut(s)	443
BsiHKAI	GWGCWC	6 cut(s)	206, 515, 591, 605, 943, 1625
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	9 cut(s)	18, 44, 215, 439, 552, 568, 617, 734, 936
BslFI	GGGAC	3 cut(s)	511, 534, 1127
BsmAI	GTCTC	6 cut(s)	27, 439, 489, 528, 1050, 1161
BsmBI	CGTCTC	4 cut(s)	27, 489, 528, 1161
BsmFI	GGGAC	3 cut(s)	511, 534, 1127
BsmI	GAATGC	3 cut(s)	395, 923, 1146
BsnI	GGCC	6 cut(s)	302, 442, 620, 761, 772, 798
Bso31I	GGTCTC	1 cut(s)	439
BsoBI	CYCGRG	1 cut(s)	65
Bsp1286I	GDGCHC	8 cut(s)	206, 515, 591, 605, 943, 1136, 1328, 1625
Bsp13I	TCCGGA	1 cut(s)	214
Bsp1720I	GCTNAGC	1 cut(s)	969
Bsp19I	CCATGG	1 cut(s)	1527
Bsp68I	TCGCGA	1 cut(s)	222
BspANI	GGCC	6 cut(s)	302, 442, 620, 761, 772, 798
BspCNI	CTCAG	5 cut(s)	961, 1003, 1033, 1465, 1573
BspEI	TCCGGA	1 cut(s)	214
BspFNI	CGCG	1 cut(s)	222
BspLI	GGNNCC	3 cut(s)	499, 538, 952
BspMAI	CTGCAG	1 cut(s)	1461
BspMI	ACCTGC	1 cut(s)	1249
BspPI	GGATC	5 cut(s)	9, 224, 225, 276, 1392
BspQI	GCTCTTC	1 cut(s)	503
BspTNI	GGTCTC	1 cut(s)	439
BsrBI	CCGCTC	1 cut(s)	793
BsrDI	GCAATG	2 cut(s)	843, 978
BsrFI	RCCGGY	2 cut(s)	438, 567
BsrI	ACTGG	1 cut(s)	207
BssAI	RCCGGY	2 cut(s)	438, 567
BssECI	CCNNGG	5 cut(s)	271, 774, 1161, 1316, 1527
BssNI	GRCGYC	3 cut(s)	36, 336, 521
BssSI	CACGAG	1 cut(s)	1095
BssT1I	CCWWGG	3 cut(s)	774, 1161, 1527
Bst2BI	CACGAG	1 cut(s)	1095
Bst2UI	CCWGG	4 cut(s)	272, 395, 804, 1317
Bst4CI	ACNGT	4 cut(s)	185, 316, 401, 1279
Bst6I	CTCTTC	6 cut(s)	83, 91, 192, 503, 776, 1508
BstACI	GRCGYC	3 cut(s)	36, 336, 521
BstBAI	YACGTR	1 cut(s)	1686
BstC8I	GCNNGC	6 cut(s)	40, 100, 246, 310, 759, 998
BstDEI	CTNAG	5 cut(s)	969, 1011, 1041, 1473, 1560
BstDSI	CCRYGG	1 cut(s)	1527
BstF5I	GGATG	5 cut(s)	919, 1031, 1081, 1258, 1523
BstFNI	CGCG	1 cut(s)	222
BstH2I	RGCGCY	1 cut(s)	1227
BstHHI	GCGC	2 cut(s)	181, 1226
BstMAI	GTCTC	6 cut(s)	27, 439, 489, 528, 1050, 1161
BstMCI	CGRYCG	1 cut(s)	443
BstMWI	GCNNNNNNNGC	5 cut(s)	108, 128, 439, 1439, 1478
BstNI	CCWGG	4 cut(s)	272, 395, 804, 1317
BstSCI	CCNGG	7 cut(s)	17, 42, 270, 393, 550, 802, 1315
BstSFI	CTRYAG	1 cut(s)	1457
BstSLI	GKGCMC	1 cut(s)	591
BstUI	CGCG	1 cut(s)	222
BstV1I	GCAGC	7 cut(s)	98, 643, 646, 920, 1091, 1429, 1490
BstV2I	GAAGAC	1 cut(s)	242
BstX2I	RGATCY	5 cut(s)	14, 159, 229, 410, 1384
BstYI	RGATCY	5 cut(s)	14, 159, 229, 410, 1384
BstZI	CGGCCG	1 cut(s)	440
BsuRI	GGCC	6 cut(s)	302, 442, 620, 761, 772, 798
BtgI	CCRYGG	1 cut(s)	1527
BtsCI	GGATG	5 cut(s)	919, 1031, 1081, 1258, 1523
BtsIMutI	CAGTG	2 cut(s)	214, 1275
BtuMI	TCGCGA	1 cut(s)	222
BveI	ACCTGC	1 cut(s)	1249
Cac8I	GCNNGC	6 cut(s)	40, 100, 246, 310, 759, 998
CfoI	GCGC	2 cut(s)	181, 1226
Cfr10I	RCCGGY	2 cut(s)	438, 567
Cfr13I	GGNCC	9 cut(s)	212, 397, 498, 760, 771, 788, 797, 1021, 1290
CseI	GACGC	3 cut(s)	44, 344, 510
CviAII	CATG	9 cut(s)	874, 1001, 1117, 1172, 1446, 1528, 1579, 1610, 1691
DdeI	CTNAG	5 cut(s)	969, 1011, 1041, 1473, 1560
DrdI	GACNNNNNNGTC	2 cut(s)	694, 1288
DriI	GACNNNNNGTC	1 cut(s)	1027
DseDI	GACNNNNNNGTC	2 cut(s)	694, 1288
EaeI	YGGCCR	2 cut(s)	440, 618
EagI	CGGCCG	1 cut(s)	440
Eam1104I	CTCTTC	6 cut(s)	83, 91, 192, 503, 776, 1508
Eam1105I	GACNNNNNGTC	1 cut(s)	1027
EarI	CTCTTC	6 cut(s)	83, 91, 192, 503, 776, 1508
EciI	GGCGGA	1 cut(s)	85
Ecl136II	GAGCTC	4 cut(s)	204, 513, 603, 1623
EclXI	CGGCCG	1 cut(s)	440
Eco130I	CCWWGG	3 cut(s)	774, 1161, 1527
Eco24I	GRGCYC	6 cut(s)	206, 515, 605, 1136, 1328, 1625
Eco31I	GGTCTC	1 cut(s)	439
Eco47I	GGWCC	6 cut(s)	212, 397, 498, 788, 1021, 1290
Eco52I	CGGCCG	1 cut(s)	440
Eco53kI	GAGCTC	4 cut(s)	204, 513, 603, 1623
Eco57I	CTGAAG	1 cut(s)	435
Eco88I	CYCGRG	1 cut(s)	65
EcoICRI	GAGCTC	4 cut(s)	204, 513, 603, 1623
EcoO109I	RGGNCCY	1 cut(s)	498
EcoRII	CCWGG	4 cut(s)	270, 393, 802, 1315
EcoT14I	CCWWGG	3 cut(s)	774, 1161, 1527
EcoT38I	GRGCYC	6 cut(s)	206, 515, 605, 1136, 1328, 1625
ErhI	CCWWGG	3 cut(s)	774, 1161, 1527
Esp3I	CGTCTC	4 cut(s)	27, 489, 528, 1161
FaeI	CATG	9 cut(s)	877, 1004, 1120, 1175, 1449, 1531, 1582, 1613, 1694
FaqI	GGGAC	3 cut(s)	511, 534, 1127
FatI	CATG	9 cut(s)	873, 1000, 1116, 1171, 1445, 1527, 1578, 1609, 1690
FauI	CCCGC	2 cut(s)	253, 457
FauNDI	CATATG	1 cut(s)	1659
Fnu4HI	GCNGC	8 cut(s)	112, 177, 657, 660, 909, 1080, 1443, 1479
FokI	GGATG	5 cut(s)	926, 1018, 1088, 1265, 1510
FriOI	GRGCYC	6 cut(s)	206, 515, 605, 1136, 1328, 1625
Fsp4HI	GCNGC	8 cut(s)	112, 177, 657, 660, 909, 1080, 1443, 1479
FspBI	CTAG	5 cut(s)	408, 434, 576, 1493, 1589
GlaI	GCGC	2 cut(s)	180, 1225
GluI	GCNGC	8 cut(s)	112, 177, 657, 660, 909, 1080, 1443, 1479
GsaI	CCCAGC	1 cut(s)	900
GsuI	CTGGAG	2 cut(s)	190, 825
HaeII	RGCGCY	1 cut(s)	1227
HaeIII	GGCC	6 cut(s)	302, 442, 620, 761, 772, 798
HapII	CCGG	9 cut(s)	18, 44, 215, 439, 552, 568, 617, 734, 936
HgaI	GACGC	3 cut(s)	44, 344, 510
HhaI	GCGC	2 cut(s)	181, 1226
Hin1I	GRCGYC	3 cut(s)	36, 336, 521
Hin1II	CATG	9 cut(s)	877, 1004, 1120, 1175, 1449, 1531, 1582, 1613, 1694
Hin6I	GCGC	2 cut(s)	179, 1224
HinP1I	GCGC	2 cut(s)	179, 1224
HincII	GTYRAC	1 cut(s)	106
HindII	GTYRAC	1 cut(s)	106
HindIII	AAGCTT	2 cut(s)	306, 1058
HpaII	CCGG	9 cut(s)	18, 44, 215, 439, 552, 568, 617, 734, 936
HphI	GGTGA	4 cut(s)	179, 250, 466, 822
Hpy166II	GTNNAC	2 cut(s)	106, 589
Hpy188III	TCNNGA	9 cut(s)	215, 221, 285, 350, 408, 534, 1049, 1107, 1574
Hpy8I	GTNNAC	2 cut(s)	106, 589
Hpy99I	CGWCG	4 cut(s)	282, 338, 405, 700
HpyAV	CCTTC	7 cut(s)	127, 550, 1104, 1239, 1315, 1456, 1611
HpyCH4III	ACNGT	4 cut(s)	185, 316, 401, 1279
HpyCH4IV	ACGT	4 cut(s)	689, 1190, 1407, 1685
HpyF10VI	GCNNNNNNNGC	5 cut(s)	108, 128, 439, 1439, 1478
HpyF3I	CTNAG	5 cut(s)	969, 1011, 1041, 1473, 1560
HpySE526I	ACGT	4 cut(s)	689, 1190, 1407, 1685
Hsp92I	GRCGYC	3 cut(s)	36, 336, 521
Hsp92II	CATG	9 cut(s)	877, 1004, 1120, 1175, 1449, 1531, 1582, 1613, 1694
HspAI	GCGC	2 cut(s)	179, 1224
Kpn2I	TCCGGA	1 cut(s)	214
LguI	GCTCTTC	1 cut(s)	503
LmnI	GCTCC	7 cut(s)	7, 119, 209, 600, 607, 950, 1620
Lsp1109I	GCAGC	7 cut(s)	98, 643, 646, 920, 1091, 1429, 1490
LweI	GCATC	3 cut(s)	700, 1066, 1348
MaeI	CTAG	5 cut(s)	408, 434, 576, 1493, 1589
MaeII	ACGT	4 cut(s)	689, 1190, 1407, 1685
MaeIII	GTNAC	4 cut(s)	185, 472, 1273, 1279
MbiI	CCGCTC	1 cut(s)	793
MflI	RGATCY	5 cut(s)	14, 159, 229, 410, 1384
MhlI	GDGCHC	8 cut(s)	206, 515, 591, 605, 943, 1136, 1328, 1625
MluCI	AATT	5 cut(s)	628, 868, 1238, 1536, 1641
MlyI	GAGTC	5 cut(s)	41, 77, 137, 1052, 1645
MmeI	TCCRAC	2 cut(s)	578, 999
MroI	TCCGGA	1 cut(s)	214
MseI	TTAA	4 cut(s)	23, 503, 1071, 1419
MspA1I	CMGCKG	3 cut(s)	111, 896, 911
MspI	CCGG	9 cut(s)	18, 44, 215, 439, 552, 568, 617, 734, 936
MspR9I	CCNGG	7 cut(s)	19, 44, 272, 395, 552, 804, 1317
Mva1269I	GAATGC	3 cut(s)	395, 923, 1146
MvaI	CCWGG	4 cut(s)	272, 395, 804, 1317
MvnI	CGCG	1 cut(s)	222
MwoI	GCNNNNNNNGC	5 cut(s)	108, 128, 439, 1439, 1478
NciI	CCSGG	3 cut(s)	19, 44, 552
NcoI	CCATGG	1 cut(s)	1527
NdeI	CATATG	1 cut(s)	1659
NlaIII	CATG	9 cut(s)	877, 1004, 1120, 1175, 1449, 1531, 1582, 1613, 1694
NlaIV	GGNNCC	3 cut(s)	499, 538, 952
NmeAIII	GCCGAG	3 cut(s)	152, 468, 774
NmuCI	GTSAC	4 cut(s)	185, 472, 1273, 1279
NruI	TCGCGA	1 cut(s)	222
PaeR7I	CTCGAG	1 cut(s)	65
PciSI	GCTCTTC	1 cut(s)	503
PcsI	WCGNNNNNNNCGW	2 cut(s)	695, 1651
PctI	GAATGC	3 cut(s)	395, 923, 1146
PfeI	GAWTC	5 cut(s)	27, 353, 751, 1394, 1453
PfoI	TCCNGGA	2 cut(s)	550, 802
PkrI	GCNGC	8 cut(s)	113, 178, 658, 661, 910, 1081, 1444, 1480
PleI	GAGTC	5 cut(s)	41, 76, 137, 1051, 1645
PpsI	GAGTC	5 cut(s)	41, 76, 137, 1051, 1645
Ppu21I	YACGTR	1 cut(s)	1686
PpuMI	RGGWCCY	1 cut(s)	498
Psp124BI	GAGCTC	4 cut(s)	206, 515, 605, 1625
Psp1406I	AACGTT	1 cut(s)	1407
Psp5II	RGGWCCY	1 cut(s)	498
Psp6I	CCWGG	4 cut(s)	270, 393, 802, 1315
PspFI	CCCAGC	1 cut(s)	896
PspGI	CCWGG	4 cut(s)	270, 393, 802, 1315
PspN4I	GGNNCC	3 cut(s)	499, 538, 952
PspPI	GGNCC	9 cut(s)	212, 397, 498, 760, 771, 788, 797, 1021, 1290
PspPPI	RGGWCCY	1 cut(s)	498
PspXI	VCTCGAGB	1 cut(s)	65
PstI	CTGCAG	1 cut(s)	1461
PsuI	RGATCY	5 cut(s)	14, 159, 229, 410, 1384
PvuII	CAGCTG	1 cut(s)	896
RruI	TCGCGA	1 cut(s)	222
SacI	GAGCTC	4 cut(s)	206, 515, 605, 1625
SapI	GCTCTTC	1 cut(s)	503
SaqAI	TTAA	4 cut(s)	23, 503, 1071, 1419
SatI	GCNGC	8 cut(s)	112, 177, 657, 660, 909, 1080, 1443, 1479
Sau96I	GGNCC	9 cut(s)	212, 397, 498, 760, 771, 788, 797, 1021, 1290
SchI	GAGTC	5 cut(s)	41, 77, 137, 1052, 1645
ScrFI	CCNGG	7 cut(s)	19, 44, 272, 395, 552, 804, 1317
SduI	GDGCHC	8 cut(s)	206, 515, 591, 605, 943, 1136, 1328, 1625
SfaNI	GCATC	3 cut(s)	700, 1066, 1348
SfcI	CTRYAG	1 cut(s)	1457
Sfr274I	CTCGAG	1 cut(s)	65
SinI	GGWCC	6 cut(s)	212, 397, 498, 788, 1021, 1290
SlaI	CTCGAG	1 cut(s)	65
SmlI	CTYRAG	3 cut(s)	65, 1047, 1572
SmoI	CTYRAG	3 cut(s)	65, 1047, 1572
SpeI	ACTAGT	1 cut(s)	575
Sse9I	AATT	5 cut(s)	628, 868, 1238, 1536, 1641
SspMI	CTAG	5 cut(s)	408, 434, 576, 1493, 1589
SstI	GAGCTC	4 cut(s)	206, 515, 605, 1625
StyD4I	CCNGG	7 cut(s)	17, 42, 270, 393, 550, 802, 1315
StyI	CCWWGG	3 cut(s)	774, 1161, 1527
TaaI	ACNGT	4 cut(s)	185, 316, 401, 1279
TaiI	ACGT	4 cut(s)	692, 1193, 1410, 1688
TaqI	TCGA	6 cut(s)	66, 280, 403, 698, 749, 1369
TasI	AATT	5 cut(s)	628, 868, 1238, 1536, 1641
TauI	GCSGC	1 cut(s)	179
TfiI	GAWTC	5 cut(s)	27, 353, 751, 1394, 1453
Tru1I	TTAA	4 cut(s)	23, 503, 1071, 1419
Tru9I	TTAA	4 cut(s)	23, 503, 1071, 1419
TscAI	CASTG	2 cut(s)	214, 1282
TseFI	GTSAC	4 cut(s)	185, 472, 1273, 1279
TseI	GCWGC	7 cut(s)	111, 656, 659, 908, 1079, 1442, 1478
Tsp45I	GTSAC	4 cut(s)	185, 472, 1273, 1279
TspDTI	ATGAA	7 cut(s)	810, 862, 967, 1068, 1281, 1514, 1556
TspGWI	ACGGA	2 cut(s)	876, 1501
TspRI	CASTG	2 cut(s)	214, 1282
VneI	GTGCAC	1 cut(s)	587
VpaK11BI	GGWCC	6 cut(s)	212, 397, 498, 788, 1021, 1290
XbaI	TCTAGA	1 cut(s)	407
XcmI	CCANNNNNNNNNTGG	1 cut(s)	628
XhoI	CTCGAG	1 cut(s)	65
XspI	CTAG	5 cut(s)	408, 434, 576, 1493, 1589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.