Flavin containing amine oxidoreductase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G57770 |
| fragaria_vesca | FvH4_5g28280 |
| malus_domestica | MD08G1243700.v1.1 |
| prunus_persica | Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1 |
| pyrus_communis | pycom08g21140 |
| rosa_chinensis | RchiOBHm_Chr7g0220531 |
| rosa_laevigata | RLG00000002219 |
| rosa_multiflora | Rmu_ssc0000189.1_g000043 |
| rosa_roxburghii | Rroxscaffold_3G00239320 |
| rosa_rugosa | Rorug07G0194400 |
| rosa_samantha | Rh7DG332000 |
| rosa_wichuraiana | Rw7G028590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 31 |
| AatII | GACGTC | 1 cut(s) | 937 |
| Acc36I | ACCTGC | 1 cut(s) | 1541 |
| AccB1I | GGYRCC | 1 cut(s) | 881 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1249 |
| AccBSI | CCGCTC | 2 cut(s) | 1424, 1432 |
| AccII | CGCG | 4 cut(s) | 340, 591, 1227, 1658 |
| AclWI | GGATC | 3 cut(s) | 489, 603, 1634 |
| AcoI | YGGCCR | 2 cut(s) | 3, 1570 |
| AcsI | RAATTY | 1 cut(s) | 1669 |
| AcuI | CTGAAG | 2 cut(s) | 14, 174 |
| AcyI | GRCGYC | 1 cut(s) | 934 |
| AfaI | GTAC | 5 cut(s) | 296, 845, 869, 1382, 1561 |
| AfeI | AGCGCT | 1 cut(s) | 903 |
| AflIII | ACRYGT | 2 cut(s) | 828, 1306 |
| AgeI | ACCGGT | 1 cut(s) | 884 |
| AgsI | TTSAA | 2 cut(s) | 899, 1453 |
| AjnI | CCWGG | 4 cut(s) | 850, 1081, 1327, 1567 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 516, 548 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1293, 1325 |
| Alw21I | GWGCWC | 1 cut(s) | 1090 |
| Alw26I | GTCTC | 1 cut(s) | 39 |
| AlwI | GGATC | 3 cut(s) | 489, 603, 1634 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 620 |
| Ama87I | CYCGRG | 1 cut(s) | 1622 |
| Aor51HI | AGCGCT | 1 cut(s) | 903 |
| AoxI | GGCC | 4 cut(s) | 3, 460, 1535, 1570 |
| ApeKI | GCWGC | 7 cut(s) | 269, 560, 617, 620, 855, 1591, 1646 |
| ApoI | RAATTY | 1 cut(s) | 1669 |
| AsiGI | ACCGGT | 1 cut(s) | 884 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 393, 528 |
| AspLEI | GCGC | 4 cut(s) | 269, 509, 904, 1658 |
| AspS9I | GGNCC | 8 cut(s) | 311, 344, 461, 500, 665, 1222, 1404, 1535 |
| AsuC2I | CCSGG | 4 cut(s) | 261, 1299, 1623, 1624 |
| AsuHPI | GGTGA | 4 cut(s) | 452, 1423, 1483, 1619 |
| AsuNHI | GCTAGC | 1 cut(s) | 1649 |
| AvaI | CYCGRG | 1 cut(s) | 1622 |
| AvaII | GGWCC | 6 cut(s) | 311, 344, 500, 665, 1222, 1404 |
| BalI | TGGCCA | 1 cut(s) | 1572 |
| BanI | GGYRCC | 1 cut(s) | 881 |
| BanII | GRGCYC | 1 cut(s) | 1090 |
| BbsI | GAAGAC | 3 cut(s) | 84, 90, 546 |
| Bbv12I | GWGCWC | 1 cut(s) | 1090 |
| BbvI | GCAGC | 7 cut(s) | 256, 547, 604, 607, 842, 1603, 1658 |
| BccI | CCATC | 4 cut(s) | 264, 415, 794, 872 |
| BciT130I | CCWGG | 4 cut(s) | 852, 1083, 1329, 1569 |
| BciVI | GTATCC | 1 cut(s) | 1054 |
| BclI | TGATCA | 1 cut(s) | 223 |
| BcnI | CCSGG | 4 cut(s) | 261, 1299, 1623, 1624 |
| BcoDI | GTCTC | 1 cut(s) | 39 |
| BfaI | CTAG | 7 cut(s) | 216, 624, 1026, 1269, 1445, 1650, 1676 |
| BfmI | CTRYAG | 1 cut(s) | 1638 |
| BfoI | RGCGCY | 2 cut(s) | 270, 905 |
| BfuAI | ACCTGC | 1 cut(s) | 1541 |
| BfuI | GTATCC | 1 cut(s) | 1054 |
| BglII | AGATCT | 1 cut(s) | 71 |
| Bme1390I | CCNGG | 8 cut(s) | 261, 852, 1083, 1299, 1329, 1569, 1623, 1624 |
| Bme18I | GGWCC | 6 cut(s) | 311, 344, 500, 665, 1222, 1404 |
| BmeT110I | CYCGRG | 1 cut(s) | 1622 |
| BmgT120I | GGNCC | 8 cut(s) | 311, 344, 461, 500, 665, 1222, 1404, 1535 |
| BmiI | GGNNCC | 5 cut(s) | 150, 666, 883, 1223, 1333 |
| BmrFI | CCNGG | 8 cut(s) | 261, 852, 1083, 1299, 1329, 1569, 1623, 1624 |
| BmrI | ACTGGG | 1 cut(s) | 1228 |
| BmsI | GCATC | 6 cut(s) | 367, 1058, 1156, 1225, 1507, 1699 |
| BmtI | GCTAGC | 1 cut(s) | 1653 |
| BmuI | ACTGGG | 1 cut(s) | 1228 |
| BoxI | GACNNNNGTC | 1 cut(s) | 309 |
| BpiI | GAAGAC | 3 cut(s) | 84, 90, 546 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 528, 560 |
| BpmI | CTGGAG | 1 cut(s) | 1065 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1001 |
| BpuEI | CTTGAG | 4 cut(s) | 333, 351, 506, 1211 |
| BpuMI | CCSGG | 4 cut(s) | 261, 1299, 1623, 1624 |
| Bsa29I | ATCGAT | 1 cut(s) | 1052 |
| BsaHI | GRCGYC | 1 cut(s) | 934 |
| BsaJI | CCNNGG | 4 cut(s) | 910, 1225, 1407, 1622 |
| BsaWI | WCCGGW | 1 cut(s) | 884 |
| Bse118I | RCCGGY | 2 cut(s) | 497, 884 |
| Bse1I | ACTGG | 2 cut(s) | 761, 1223 |
| Bse3DI | GCAATG | 1 cut(s) | 1051 |
| BseBI | CCWGG | 4 cut(s) | 852, 1083, 1329, 1569 |
| BseCI | ATCGAT | 1 cut(s) | 1052 |
| BseDI | CCNNGG | 4 cut(s) | 910, 1225, 1407, 1622 |
| BseGI | GGATG | 4 cut(s) | 235, 256, 426, 1240 |
| BseMI | GCAATG | 1 cut(s) | 1051 |
| BseMII | CTCAG | 1 cut(s) | 321 |
| BseNI | ACTGG | 2 cut(s) | 761, 1223 |
| BseXI | GCAGC | 7 cut(s) | 256, 547, 604, 607, 842, 1603, 1658 |
| BsgI | GTGCAG | 2 cut(s) | 533, 841 |
| Bsh1236I | CGCG | 4 cut(s) | 340, 591, 1227, 1658 |
| BshFI | GGCC | 4 cut(s) | 5, 462, 1537, 1572 |
| BshNI | GGYRCC | 1 cut(s) | 881 |
| BshTI | ACCGGT | 1 cut(s) | 884 |
| BshVI | ATCGAT | 1 cut(s) | 1052 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1090 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1622 |
| BsiSI | CCGG | 5 cut(s) | 261, 498, 885, 1298, 1623 |
| BslFI | GGGAC | 2 cut(s) | 1235, 1250 |
| BsmAI | GTCTC | 1 cut(s) | 39 |
| BsmFI | GGGAC | 2 cut(s) | 1235, 1250 |
| BsmI | GAATGC | 2 cut(s) | 773, 1693 |
| BsnI | GGCC | 4 cut(s) | 5, 462, 1537, 1572 |
| BsoBI | CYCGRG | 1 cut(s) | 1622 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1090 |
| Bsp68I | TCGCGA | 1 cut(s) | 340 |
| BspANI | GGCC | 4 cut(s) | 5, 462, 1537, 1572 |
| BspCNI | CTCAG | 1 cut(s) | 320 |
| BspDI | ATCGAT | 1 cut(s) | 1052 |
| BspFNI | CGCG | 4 cut(s) | 340, 591, 1227, 1658 |
| BspHI | TCATGA | 1 cut(s) | 250 |
| BspLI | GGNNCC | 5 cut(s) | 150, 666, 883, 1223, 1333 |
| BspMAI | CTGCAG | 1 cut(s) | 1642 |
| BspMI | ACCTGC | 1 cut(s) | 1541 |
| BspOI | GCTAGC | 1 cut(s) | 1653 |
| BspPI | GGATC | 3 cut(s) | 489, 603, 1634 |
| BspT107I | GGYRCC | 1 cut(s) | 881 |
| BsrBI | CCGCTC | 2 cut(s) | 1424, 1432 |
| BsrDI | GCAATG | 1 cut(s) | 1051 |
| BsrFI | RCCGGY | 2 cut(s) | 497, 884 |
| BsrI | ACTGG | 2 cut(s) | 761, 1223 |
| BssAI | RCCGGY | 2 cut(s) | 497, 884 |
| BssECI | CCNNGG | 4 cut(s) | 910, 1225, 1407, 1622 |
| BssNI | GRCGYC | 1 cut(s) | 934 |
| Bst2UI | CCWGG | 4 cut(s) | 852, 1083, 1329, 1569 |
| Bst4CI | ACNGT | 3 cut(s) | 90, 1325, 1404 |
| Bst6I | CTCTTC | 1 cut(s) | 118 |
| BstACI | GRCGYC | 1 cut(s) | 934 |
| BstC8I | GCNNGC | 4 cut(s) | 783, 1434, 1539, 1651 |
| BstDEI | CTNAG | 4 cut(s) | 307, 1001, 1277, 1511 |
| BstDSI | CCRYGG | 2 cut(s) | 910, 1225 |
| BstF5I | GGATG | 4 cut(s) | 235, 256, 426, 1240 |
| BstFNI | CGCG | 4 cut(s) | 340, 591, 1227, 1658 |
| BstH2I | RGCGCY | 2 cut(s) | 270, 905 |
| BstHHI | GCGC | 4 cut(s) | 269, 509, 904, 1658 |
| BstMAI | GTCTC | 1 cut(s) | 39 |
| BstNI | CCWGG | 4 cut(s) | 852, 1083, 1329, 1569 |
| BstNSI | RCATGY | 2 cut(s) | 832, 1310 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 309 |
| BstSCI | CCNGG | 8 cut(s) | 259, 850, 1081, 1297, 1327, 1567, 1621, 1622 |
| BstSFI | CTRYAG | 1 cut(s) | 1638 |
| BstUI | CGCG | 4 cut(s) | 340, 591, 1227, 1658 |
| BstV1I | GCAGC | 7 cut(s) | 256, 547, 604, 607, 842, 1603, 1658 |
| BstV2I | GAAGAC | 3 cut(s) | 84, 90, 546 |
| BstX2I | RGATCY | 3 cut(s) | 71, 481, 595 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 263 |
| BstYI | RGATCY | 3 cut(s) | 71, 481, 595 |
| Bsu15I | ATCGAT | 1 cut(s) | 1052 |
| BsuI | GTATCC | 1 cut(s) | 1054 |
| BsuRI | GGCC | 4 cut(s) | 5, 462, 1537, 1572 |
| BsuTUI | ATCGAT | 1 cut(s) | 1052 |
| BtgI | CCRYGG | 2 cut(s) | 910, 1225 |
| BtsCI | GGATG | 4 cut(s) | 235, 256, 426, 1240 |
| BtsI | GCAGTG | 2 cut(s) | 516, 1647 |
| BtsIMutI | CAGTG | 2 cut(s) | 516, 1647 |
| BtuMI | TCGCGA | 1 cut(s) | 340 |
| BveI | ACCTGC | 1 cut(s) | 1541 |
| Cac8I | GCNNGC | 4 cut(s) | 783, 1434, 1539, 1651 |
| CaiI | CAGNNNCTG | 1 cut(s) | 620 |
| CciI | TCATGA | 1 cut(s) | 250 |
| CfoI | GCGC | 4 cut(s) | 269, 509, 904, 1658 |
| Cfr10I | RCCGGY | 2 cut(s) | 497, 884 |
| Cfr13I | GGNCC | 8 cut(s) | 311, 344, 461, 500, 665, 1222, 1404, 1535 |
| Cfr42I | CCGCGG | 1 cut(s) | 1228 |
| Cfr9I | CCCGGG | 1 cut(s) | 1622 |
| ClaI | ATCGAT | 1 cut(s) | 1052 |
| CpoI | CGGWCCG | 1 cut(s) | 1404 |
| CseI | GACGC | 3 cut(s) | 34, 1175, 1504 |
| Csp6I | GTAC | 5 cut(s) | 295, 844, 868, 1381, 1560 |
| CspAI | ACCGGT | 1 cut(s) | 884 |
| CspI | CGGWCCG | 1 cut(s) | 1404 |
| CviAII | CATG | 6 cut(s) | 251, 399, 829, 953, 1144, 1307 |
| CviQI | GTAC | 5 cut(s) | 295, 844, 868, 1381, 1560 |
| DdeI | CTNAG | 4 cut(s) | 307, 1001, 1277, 1511 |
| DraI | TTTAAA | 2 cut(s) | 645, 1068 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 31 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 31 |
| EaeI | YGGCCR | 2 cut(s) | 3, 1570 |
| Eam1104I | CTCTTC | 1 cut(s) | 118 |
| EarI | CTCTTC | 1 cut(s) | 118 |
| EciI | GGCGGA | 1 cut(s) | 689 |
| Ecl136II | GAGCTC | 1 cut(s) | 1088 |
| Eco24I | GRGCYC | 1 cut(s) | 1090 |
| Eco32I | GATATC | 1 cut(s) | 1260 |
| Eco47I | GGWCC | 6 cut(s) | 311, 344, 500, 665, 1222, 1404 |
| Eco47III | AGCGCT | 1 cut(s) | 903 |
| Eco53kI | GAGCTC | 1 cut(s) | 1088 |
| Eco57I | CTGAAG | 2 cut(s) | 14, 174 |
| Eco88I | CYCGRG | 1 cut(s) | 1622 |
| EcoICRI | GAGCTC | 1 cut(s) | 1088 |
| EcoO109I | RGGNCCY | 4 cut(s) | 311, 344, 461, 665 |
| EcoRI | GAATTC | 1 cut(s) | 1669 |
| EcoRII | CCWGG | 4 cut(s) | 850, 1081, 1327, 1567 |
| EcoRV | GATATC | 1 cut(s) | 1260 |
| EcoT22I | ATGCAT | 2 cut(s) | 1051, 1149 |
| EcoT38I | GRGCYC | 1 cut(s) | 1090 |
| FaeI | CATG | 6 cut(s) | 254, 402, 832, 956, 1147, 1310 |
| FaqI | GGGAC | 2 cut(s) | 1235, 1250 |
| FatI | CATG | 6 cut(s) | 250, 398, 828, 952, 1143, 1306 |
| FauI | CCCGC | 2 cut(s) | 584, 1425 |
| FauNDI | CATATG | 2 cut(s) | 1102, 1531 |
| FbaI | TGATCA | 1 cut(s) | 223 |
| FokI | GGATG | 4 cut(s) | 242, 243, 433, 1247 |
| FriOI | GRGCYC | 1 cut(s) | 1090 |
| FspBI | CTAG | 7 cut(s) | 216, 624, 1026, 1269, 1445, 1650, 1676 |
| GlaI | GCGC | 4 cut(s) | 268, 508, 903, 1657 |
| GsuI | CTGGAG | 1 cut(s) | 1065 |
| HaeII | RGCGCY | 2 cut(s) | 270, 905 |
| HaeIII | GGCC | 4 cut(s) | 5, 462, 1537, 1572 |
| HapII | CCGG | 5 cut(s) | 261, 498, 885, 1298, 1623 |
| HgaI | GACGC | 3 cut(s) | 34, 1175, 1504 |
| HhaI | GCGC | 4 cut(s) | 269, 509, 904, 1658 |
| Hin1I | GRCGYC | 1 cut(s) | 934 |
| Hin1II | CATG | 6 cut(s) | 254, 402, 832, 956, 1147, 1310 |
| Hin6I | GCGC | 4 cut(s) | 267, 507, 902, 1656 |
| HinP1I | GCGC | 4 cut(s) | 267, 507, 902, 1656 |
| HindIII | AAGCTT | 1 cut(s) | 527 |
| HpaII | CCGG | 5 cut(s) | 261, 498, 885, 1298, 1623 |
| HphI | GGTGA | 4 cut(s) | 452, 1423, 1483, 1619 |
| Hpy166II | GTNNAC | 4 cut(s) | 332, 427, 932, 1117 |
| Hpy188I | TCNGA | 7 cut(s) | 71, 712, 799, 1257, 1408, 1503, 1631 |
| Hpy8I | GTNNAC | 4 cut(s) | 332, 427, 932, 1117 |
| Hpy99I | CGWCG | 1 cut(s) | 1169 |
| HpyAV | CCTTC | 6 cut(s) | 91, 148, 324, 431, 645, 1349 |
| HpyCH4III | ACNGT | 3 cut(s) | 90, 1325, 1404 |
| HpyCH4IV | ACGT | 1 cut(s) | 934 |
| HpyCH4V | TGCA | 9 cut(s) | 206, 514, 836, 858, 1049, 1147, 1292, 1541, 1640 |
| HpyF3I | CTNAG | 4 cut(s) | 307, 1001, 1277, 1511 |
| HpySE526I | ACGT | 1 cut(s) | 934 |
| Hsp92I | GRCGYC | 1 cut(s) | 934 |
| Hsp92II | CATG | 6 cut(s) | 254, 402, 832, 956, 1147, 1310 |
| HspAI | GCGC | 4 cut(s) | 267, 507, 902, 1656 |
| Ksp22I | TGATCA | 1 cut(s) | 223 |
| KspI | CCGCGG | 1 cut(s) | 1228 |
| LmnI | GCTCC | 6 cut(s) | 148, 536, 637, 674, 683, 1085 |
| Lsp1109I | GCAGC | 7 cut(s) | 256, 547, 604, 607, 842, 1603, 1658 |
| LweI | GCATC | 6 cut(s) | 367, 1058, 1156, 1225, 1507, 1699 |
| MaeI | CTAG | 7 cut(s) | 216, 624, 1026, 1269, 1445, 1650, 1676 |
| MaeII | ACGT | 1 cut(s) | 934 |
| MaeIII | GTNAC | 3 cut(s) | 450, 570, 1607 |
| MbiI | CCGCTC | 2 cut(s) | 1424, 1432 |
| MflI | RGATCY | 3 cut(s) | 71, 481, 595 |
| MhlI | GDGCHC | 1 cut(s) | 1090 |
| MlsI | TGGCCA | 1 cut(s) | 1572 |
| MluCI | AATT | 4 cut(s) | 10, 171, 1013, 1669 |
| MluNI | TGGCCA | 1 cut(s) | 1572 |
| MlyI | GAGTC | 4 cut(s) | 256, 299, 1002, 1604 |
| MmeI | TCCRAC | 2 cut(s) | 970, 1462 |
| Mox20I | TGGCCA | 1 cut(s) | 1572 |
| Mph1103I | ATGCAT | 2 cut(s) | 1051, 1149 |
| MroXI | GAANNNNTTC | 2 cut(s) | 393, 528 |
| MscI | TGGCCA | 1 cut(s) | 1572 |
| MseI | TTAA | 6 cut(s) | 129, 477, 644, 734, 945, 1067 |
| MslI | CAYNNNNRTG | 4 cut(s) | 261, 397, 1054, 1129 |
| Msp20I | TGGCCA | 1 cut(s) | 1572 |
| MspA1I | CMGCKG | 2 cut(s) | 617, 1227 |
| MspI | CCGG | 5 cut(s) | 261, 498, 885, 1298, 1623 |
| MspR9I | CCNGG | 8 cut(s) | 261, 852, 1083, 1299, 1329, 1569, 1623, 1624 |
| Mva1269I | GAATGC | 2 cut(s) | 773, 1693 |
| MvaI | CCWGG | 4 cut(s) | 852, 1083, 1329, 1569 |
| MvnI | CGCG | 4 cut(s) | 340, 591, 1227, 1658 |
| NciI | CCSGG | 4 cut(s) | 261, 1299, 1623, 1624 |
| NdeI | CATATG | 2 cut(s) | 1102, 1531 |
| NheI | GCTAGC | 1 cut(s) | 1649 |
| NlaIII | CATG | 6 cut(s) | 254, 402, 832, 956, 1147, 1310 |
| NlaIV | GGNNCC | 5 cut(s) | 150, 666, 883, 1223, 1333 |
| NmeAIII | GCCGAG | 1 cut(s) | 1402 |
| NmuCI | GTSAC | 2 cut(s) | 450, 1607 |
| NruI | TCGCGA | 1 cut(s) | 340 |
| NsiI | ATGCAT | 2 cut(s) | 1051, 1149 |
| NspI | RCATGY | 2 cut(s) | 832, 1310 |
| PagI | TCATGA | 1 cut(s) | 250 |
| PciI | ACATGT | 2 cut(s) | 828, 1306 |
| PctI | GAATGC | 2 cut(s) | 773, 1693 |
| PdmI | GAANNNNTTC | 2 cut(s) | 393, 528 |
| PfeI | GAWTC | 8 cut(s) | 389, 413, 722, 1097, 1136, 1161, 1195, 1387 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1249 |
| PfoI | TCCNGGA | 2 cut(s) | 1081, 1327 |
| PinAI | ACCGGT | 1 cut(s) | 884 |
| PleI | GAGTC | 4 cut(s) | 255, 299, 1001, 1604 |
| PpsI | GAGTC | 4 cut(s) | 255, 299, 1001, 1604 |
| PpuMI | RGGWCCY | 3 cut(s) | 311, 344, 665 |
| PscI | ACATGT | 2 cut(s) | 828, 1306 |
| PshAI | GACNNNNGTC | 1 cut(s) | 309 |
| Psp124BI | GAGCTC | 1 cut(s) | 1090 |
| Psp5II | RGGWCCY | 3 cut(s) | 311, 344, 665 |
| Psp6I | CCWGG | 4 cut(s) | 850, 1081, 1327, 1567 |
| PspGI | CCWGG | 4 cut(s) | 850, 1081, 1327, 1567 |
| PspN4I | GGNNCC | 5 cut(s) | 150, 666, 883, 1223, 1333 |
| PspPI | GGNCC | 8 cut(s) | 311, 344, 461, 500, 665, 1222, 1404, 1535 |
| PspPPI | RGGWCCY | 3 cut(s) | 311, 344, 665 |
| PstI | CTGCAG | 1 cut(s) | 1642 |
| PstNI | CAGNNNCTG | 1 cut(s) | 620 |
| PsuI | RGATCY | 3 cut(s) | 71, 481, 595 |
| PvuII | CAGCTG | 1 cut(s) | 617 |
| RruI | TCGCGA | 1 cut(s) | 340 |
| RsaI | GTAC | 5 cut(s) | 296, 845, 869, 1382, 1561 |
| RsaNI | GTAC | 5 cut(s) | 295, 844, 868, 1381, 1560 |
| RseI | CAYNNNNRTG | 4 cut(s) | 261, 397, 1054, 1129 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1404 |
| RsrII | CGGWCCG | 1 cut(s) | 1404 |
| SacI | GAGCTC | 1 cut(s) | 1090 |
| SacII | CCGCGG | 1 cut(s) | 1228 |
| SaqAI | TTAA | 6 cut(s) | 129, 477, 644, 734, 945, 1067 |
| Sau96I | GGNCC | 8 cut(s) | 311, 344, 461, 500, 665, 1222, 1404, 1535 |
| SchI | GAGTC | 4 cut(s) | 256, 299, 1002, 1604 |
| ScrFI | CCNGG | 8 cut(s) | 261, 852, 1083, 1299, 1329, 1569, 1623, 1624 |
| SduI | GDGCHC | 1 cut(s) | 1090 |
| SfaNI | GCATC | 6 cut(s) | 367, 1058, 1156, 1225, 1507, 1699 |
| SfcI | CTRYAG | 1 cut(s) | 1638 |
| Sfr303I | CCGCGG | 1 cut(s) | 1228 |
| SgrAI | CRCCGGYG | 1 cut(s) | 884 |
| SgrBI | CCGCGG | 1 cut(s) | 1228 |
| SinI | GGWCC | 6 cut(s) | 311, 344, 500, 665, 1222, 1404 |
| SmaI | CCCGGG | 1 cut(s) | 1624 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 261, 397, 1054, 1129 |
| SmlI | CTYRAG | 4 cut(s) | 348, 366, 485, 1190 |
| SmoI | CTYRAG | 4 cut(s) | 348, 366, 485, 1190 |
| Sse9I | AATT | 4 cut(s) | 10, 171, 1013, 1669 |
| SspMI | CTAG | 7 cut(s) | 216, 624, 1026, 1269, 1445, 1650, 1676 |
| SstI | GAGCTC | 1 cut(s) | 1090 |
| StyD4I | CCNGG | 8 cut(s) | 259, 850, 1081, 1297, 1327, 1567, 1621, 1622 |
| TaaI | ACNGT | 3 cut(s) | 90, 1325, 1404 |
| TaiI | ACGT | 1 cut(s) | 937 |
| TaqI | TCGA | 6 cut(s) | 957, 972, 1021, 1052, 1164, 1613 |
| TaqII | GACCGA | 1 cut(s) | 1334 |
| TasI | AATT | 4 cut(s) | 10, 171, 1013, 1669 |
| TatI | WGTACW | 1 cut(s) | 1380 |
| TauI | GCSGC | 3 cut(s) | 8, 21, 1656 |
| TfiI | GAWTC | 8 cut(s) | 389, 413, 722, 1097, 1136, 1161, 1195, 1387 |
| Tru1I | TTAA | 6 cut(s) | 129, 477, 644, 734, 945, 1067 |
| Tru9I | TTAA | 6 cut(s) | 129, 477, 644, 734, 945, 1067 |
| TscAI | CASTG | 2 cut(s) | 516, 1647 |
| TseFI | GTSAC | 2 cut(s) | 450, 1607 |
| TseI | GCWGC | 7 cut(s) | 269, 560, 617, 620, 855, 1591, 1646 |
| Tsp45I | GTSAC | 2 cut(s) | 450, 1607 |
| TspDTI | ATGAA | 4 cut(s) | 73, 93, 1132, 1187 |
| TspGWI | ACGGA | 3 cut(s) | 27, 482, 899 |
| TspMI | CCCGGG | 1 cut(s) | 1622 |
| TspRI | CASTG | 2 cut(s) | 516, 1647 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1249 |
| VpaK11BI | GGWCC | 6 cut(s) | 311, 344, 500, 665, 1222, 1404 |
| XapI | RAATTY | 1 cut(s) | 1669 |
| XceI | RCATGY | 2 cut(s) | 832, 1310 |
| XmaI | CCCGGG | 1 cut(s) | 1622 |
| XmnI | GAANNNNTTC | 2 cut(s) | 393, 528 |
| XspI | CTAG | 7 cut(s) | 216, 624, 1026, 1269, 1445, 1650, 1676 |
| ZraI | GACGTC | 1 cut(s) | 935 |
| Zsp2I | ATGCAT | 2 cut(s) | 1051, 1149 |