Rh7DG332000

Flavin containing amine oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0016601
Physical Location & Seq
Forward (+)
40651028 .. 40655109
4082 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG332000.1

Sequence Viewer

Length: 1722 bp
ATGTCCTCGTTCCCAAATACTCTGCAGTTTCTCCAACCTCTTTCTCACGCTAGCACCAAATCCCTCAGAAAATCAGTTTTGGCGCGAAACTCTTCAAATGGCTCTGTCTCCCTCAAACAAATCAAAACTACCCCACTCCCAGGCAAAGCAGAGGCTGATGTTGTAGTCATTGGGAGTGGTATAGGTGGATTGTGTTGTGCCGGGCTATTAGCTAGGTACCAGCAAGATGTCCTTGTCTTAGAGAGTCATGATCTACCCGGCGGTGCTGCTCATTCATTTGAGATTAAAGGCTTTCAATTTGACTCCGGCCCATCTTTGTTCTCTGGTTTTCAATCCAAAGGCCCTCAGGCCAATCCTCTTGGACAAGTTCTGGATGCATTGGGTGAGACAATTCCTTGTGCCAGTTATGATTCATGGATGGTCTACCTACCTGAAGGTGAATTTCTGTCGCGCATTGGTCCCACAGACTTTTTCAAGGACCTTGAGAAGTATGCAAGTGCAAATGCTGTTCAAGAATGGAAAAAGCTTTTGGATGCCATTCTTCCAATGTCTGCAGCTGCAATGGCTCTGCCTCCACTTTCTATCCGAGGGGATTTGGGTGTTCTTTCTACTGCTGGAGCTAGATATGCTCCCTCTCTATTAAAATCTTTTGCTCAAATGGGACCTAAGGGAGCGCTTGGTGCCACAAAGCTACTAAGACCATTTTCAGAAATCATGGACTCATTAGAACTGAAAGATCCCTTTATACGTAATTGGGTGGATCTACTGGCTTTCTTGCTTGCTGGGGTGAAATCTAATGGTATACTTTCAGCAGAGATGGTTTATATGTTTGCGGAGTGGTATAAGCCAGGTTGCTGTCTTGAATACCCTCTTCATGGAAGTGGTGCAGTTGTTGAAGCTCTTGTTCGGGGAATGCAGAAGTTTGGTGGAAGGATTTCTTTAGGAAGTCATGTGGAAAAAATTGTTGTTGAAAACGGTCGAGCCACTGGGGTCAAGCTAAGAAGTGGACAATTTATACGTGCTAAGAAGGCTGTTGTTAGTAATGCATCTATGTGGGACACTCTAAATCTATTACCTAAAGAAGTTGTTCCAAAGTCATACGAGAAAAGGATTGAGATGACCCCTCAATGTGAATCCTTCATGCATCTTCATTTGGGATTTGATGCTGAGTGTACGCATAAAGACTTAGGAATTCATCATATAGTTGTCAATGATTGGGATAGAGGGGTTGATGCTGACCAGAATGTTGTTTTGATATCTGTACCAAGTGTACTAAGTCCGGATCTGGCACCACCTGGGAAACATGTCTTGCATGCCTATCTTCCAGGAACTGAACCCTTTGATTTGTGGAAAGGATTGGACCGTAAAAGTACTGCATACAAAGAGCTCAAAGCTGAAAGATCCGAGGTTATGTGGAGAGCTGTGGAGCGGGCACTTGGTCCTGGGTTTAGCCGTGAAAAATGCGAGGTCAAGTTAGTTGGTTCTCCATTGACGCATCAAAGATTTCTTCGAAGGAACCGAGGAACATATGGGCCAGCAGTAGAAGCTGGTAAAGACTCTATTCCTGGGCACTCCACTCCGATTCCTCAACTTTATTGCTGTGGAGATTCTACTTTTCCTGGCATTGGAGTCCCTGCAGTTGCTGCTAGTGGTGCCATTGTTGCCAATTCACTAGTTTCTGTTGCTCAACACTCTCAACTTCTTGATGCAATTGGAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Amino_oxidase NAD_binding_8

Protein Analysis

573

Amino Acids

61.79

Weight (kDa)

8.21

Isoelectric Point (pI)

35.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAO PF01266 53 - 90 3.5e-06 FAD dependent oxidoreductase
NAD_binding_8 PF13450 56 - 111 7.4e-15 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 61 - 556 7.3e-22 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016601)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57770
fragaria_vesca FvH4_5g28280
malus_domestica MD08G1243700.v1.1
prunus_persica Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1
pyrus_communis pycom08g21140
rosa_chinensis RchiOBHm_Chr7g0220531
rosa_laevigata RLG00000002219
rosa_multiflora Rmu_ssc0000189.1_g000043
rosa_roxburghii Rroxscaffold_3G00239320
rosa_rugosa Rorug07G0194400
rosa_samantha Rh7DG332000
rosa_wichuraiana Rw7G028590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 216
AccB1I GGYRCC 4 cut(s) 216, 680, 1288, 1652
AccBSI CCGCTC 1 cut(s) 1429
AccI GTMKAC 2 cut(s) 423, 802
AccII CGCG 2 cut(s) 85, 451
AccIII TCCGGA 1 cut(s) 1279
AciI CCGC 3 cut(s) 261, 833, 1429
AclWI GGATC 4 cut(s) 731, 768, 1290, 1395
AcsI RAATTY 2 cut(s) 440, 1191
AcuI CTGAAG 1 cut(s) 453
AfaI GTAC 5 cut(s) 218, 1174, 1263, 1272, 1372
AfeI AGCGCT 1 cut(s) 675
AfiI CCNNNNNNNGG 3 cut(s) 140, 875, 1625
AflIII ACRYGT 1 cut(s) 1303
AgsI TTSAA 8 cut(s) 96, 296, 332, 475, 512, 863, 896, 971
AhlI ACTAGT 1 cut(s) 1672
AjnI CCWGG 7 cut(s) 139, 847, 1294, 1324, 1441, 1564, 1618
AjuI GAANNNNNNNTTGG 2 cut(s) 512, 544
Alw21I GWGCWC 1 cut(s) 1389
Alw26I GTCTC 2 cut(s) 112, 380
AlwI GGATC 4 cut(s) 731, 768, 1290, 1395
AlwNI CAGNNNCTG 3 cut(s) 155, 1331, 1643
Aor13HI TCCGGA 1 cut(s) 1279
Aor51HI AGCGCT 1 cut(s) 675
AoxI GGCC 4 cut(s) 307, 340, 348, 1532
ApeKI GCWGC 4 cut(s) 266, 554, 557, 1643
ApoI RAATTY 2 cut(s) 440, 1191
Asp700I GAANNNNTTC 3 cut(s) 91, 934, 1086
Asp718I GGTACC 1 cut(s) 216
AspLEI GCGC 3 cut(s) 85, 453, 676
AspS9I GGNCC 8 cut(s) 308, 341, 458, 478, 662, 1360, 1439, 1532
AsuC2I CCSGG 2 cut(s) 202, 258
AsuHPI GGTGA 3 cut(s) 395, 449, 799
AsuII TTCGAA 1 cut(s) 1510
AsuNHI GCTAGC 1 cut(s) 50
AvaII GGWCC 5 cut(s) 458, 478, 662, 1360, 1439
AxyI CCTNAGG 2 cut(s) 345, 666
BaeGI GKGCMC 2 cut(s) 1435, 1572
BanI GGYRCC 4 cut(s) 216, 680, 1288, 1652
BanII GRGCYC 1 cut(s) 1389
Bbv12I GWGCWC 1 cut(s) 1389
BbvI GCAGC 4 cut(s) 253, 544, 566, 1630
BccI CCATC 3 cut(s) 319, 412, 811
BceAI ACGGC 1 cut(s) 1437
BciT130I CCWGG 7 cut(s) 141, 849, 1296, 1326, 1443, 1566, 1620
BcnI CCSGG 2 cut(s) 202, 258
BcoDI GTCTC 2 cut(s) 112, 380
BcuI ACTAGT 1 cut(s) 1672
BfaI CTAG 5 cut(s) 51, 213, 621, 1647, 1673
BfmI CTRYAG 3 cut(s) 23, 552, 1635
BfoI RGCGCY 1 cut(s) 677
BisI GCNGC 4 cut(s) 267, 555, 558, 1644
BlsI GCNGC 4 cut(s) 268, 556, 559, 1645
BmcAI AGTACT 1 cut(s) 1372
Bme1390I CCNGG 9 cut(s) 141, 202, 258, 849, 1296, 1326, 1443, 1566, 1620
Bme18I GGWCC 5 cut(s) 458, 478, 662, 1360, 1439
BmgT120I GGNCC 8 cut(s) 308, 341, 458, 478, 662, 1360, 1439, 1532
BmiI GGNNCC 7 cut(s) 218, 460, 663, 682, 1290, 1517, 1654
BmrFI CCNGG 9 cut(s) 141, 202, 258, 849, 1296, 1326, 1443, 1566, 1620
BmrI ACTGGG 1 cut(s) 996
BmsI GCATC 8 cut(s) 364, 523, 1055, 1153, 1153, 1222, 1504, 1696
BmtI GCTAGC 1 cut(s) 54
BmuI ACTGGG 1 cut(s) 996
BpmI CTGGAG 1 cut(s) 636
Bpu14I TTCGAA 1 cut(s) 1510
BpuEI CTTGAG 1 cut(s) 503
BpuMI CCSGG 2 cut(s) 202, 258
BsaAI YACGTR 2 cut(s) 749, 1019
BsaJI CCNNGG 7 cut(s) 139, 586, 1295, 1404, 1442, 1519, 1565
BsaWI WCCGGW 1 cut(s) 1279
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 875, 1625
Bse1I ACTGG 3 cut(s) 402, 771, 991
Bse21I CCTNAGG 2 cut(s) 345, 666
Bse3DI GCAATG 1 cut(s) 567
BseAI TCCGGA 1 cut(s) 1279
BseBI CCWGG 7 cut(s) 141, 849, 1296, 1326, 1443, 1566, 1620
BseDI CCNNGG 7 cut(s) 139, 586, 1295, 1404, 1442, 1519, 1565
BseGI GGATG 3 cut(s) 379, 423, 538
BseLI CCNNNNNNNGG 3 cut(s) 140, 875, 1625
BseMI GCAATG 1 cut(s) 567
BseMII CTCAG 3 cut(s) 79, 359, 1158
BseNI ACTGG 3 cut(s) 402, 771, 991
BseSI GKGCMC 2 cut(s) 1435, 1572
BseXI GCAGC 4 cut(s) 253, 544, 566, 1630
BseYI CCCAGC 1 cut(s) 782
BsgI GTGCAG 1 cut(s) 906
Bsh1236I CGCG 2 cut(s) 85, 451
Bsh1285I CGRYCG 1 cut(s) 979
BshFI GGCC 4 cut(s) 309, 342, 350, 1534
BshNI GGYRCC 4 cut(s) 216, 680, 1288, 1652
BsiEI CGRYCG 1 cut(s) 979
BsiHKAI GWGCWC 1 cut(s) 1389
BsiSI CCGG 4 cut(s) 201, 258, 306, 1280
BslFI GGGAC 4 cut(s) 444, 675, 1070, 1616
BslI CCNNNNNNNGG 3 cut(s) 140, 875, 1625
BsmAI GTCTC 2 cut(s) 112, 380
BsmFI GGGAC 4 cut(s) 444, 675, 1070, 1616
BsmI GAATGC 1 cut(s) 918
BsnI GGCC 4 cut(s) 309, 342, 350, 1534
Bsp119I TTCGAA 1 cut(s) 1510
Bsp1286I GDGCHC 3 cut(s) 1389, 1435, 1572
Bsp13I TCCGGA 1 cut(s) 1279
Bsp143I GATC 5 cut(s) 250, 736, 760, 1282, 1400
BspACI CCGC 3 cut(s) 261, 833, 1429
BspANI GGCC 4 cut(s) 309, 342, 350, 1534
BspCNI CTCAG 3 cut(s) 78, 358, 1159
BspEI TCCGGA 1 cut(s) 1279
BspFNI CGCG 2 cut(s) 85, 451
BspHI TCATGA 1 cut(s) 247
BspLI GGNNCC 7 cut(s) 218, 460, 663, 682, 1290, 1517, 1654
BspMAI CTGCAG 3 cut(s) 27, 556, 1639
BspOI GCTAGC 1 cut(s) 54
BspPI GGATC 4 cut(s) 731, 768, 1290, 1395
BspT104I TTCGAA 1 cut(s) 1510
BspT107I GGYRCC 4 cut(s) 216, 680, 1288, 1652
BsrBI CCGCTC 1 cut(s) 1429
BsrDI GCAATG 1 cut(s) 567
BsrI ACTGG 3 cut(s) 402, 771, 991
BssECI CCNNGG 7 cut(s) 139, 586, 1295, 1404, 1442, 1519, 1565
BssMI GATC 5 cut(s) 250, 736, 760, 1282, 1400
BssNAI GTATAC 1 cut(s) 803
Bst1107I GTATAC 1 cut(s) 803
Bst2UI CCWGG 7 cut(s) 141, 849, 1296, 1326, 1443, 1566, 1620
Bst4CI ACNGT 2 cut(s) 977, 1364
Bst6I CTCTTC 2 cut(s) 97, 876
BstAPI GCANNNNNTGC 1 cut(s) 1643
BstBAI YACGTR 2 cut(s) 749, 1019
BstBI TTCGAA 1 cut(s) 1510
BstC8I GCNNGC 5 cut(s) 52, 780, 1314, 1431, 1536
BstF5I GGATG 3 cut(s) 379, 423, 538
BstFNI CGCG 2 cut(s) 85, 451
BstH2I RGCGCY 1 cut(s) 677
BstHHI GCGC 3 cut(s) 85, 453, 676
BstKTI GATC 5 cut(s) 253, 739, 763, 1285, 1403
BstMAI GTCTC 2 cut(s) 112, 380
BstMBI GATC 5 cut(s) 250, 736, 760, 1282, 1400
BstMCI CGRYCG 1 cut(s) 979
BstMWI GCNNNNNNNGC 8 cut(s) 563, 626, 680, 1028, 1544, 1643, 1652, 1661
BstNI CCWGG 7 cut(s) 141, 849, 1296, 1326, 1443, 1566, 1620
BstNSI RCATGY 2 cut(s) 1307, 1316
BstSCI CCNGG 9 cut(s) 139, 200, 256, 847, 1294, 1324, 1441, 1564, 1618
BstSFI CTRYAG 3 cut(s) 23, 552, 1635
BstSLI GKGCMC 2 cut(s) 1435, 1572
BstSNI TACGTA 1 cut(s) 749
BstUI CGCG 2 cut(s) 85, 451
BstV1I GCAGC 4 cut(s) 253, 544, 566, 1630
BstX2I RGATCY 4 cut(s) 736, 760, 1282, 1400
BstYI RGATCY 4 cut(s) 736, 760, 1282, 1400
BstZ17I GTATAC 1 cut(s) 803
Bsu36I CCTNAGG 2 cut(s) 345, 666
BsuRI GGCC 4 cut(s) 309, 342, 350, 1534
BtsCI GGATG 3 cut(s) 379, 423, 538
BtsIMutI CAGTG 1 cut(s) 984
Cac8I GCNNGC 5 cut(s) 52, 780, 1314, 1431, 1536
CaiI CAGNNNCTG 3 cut(s) 155, 1331, 1643
CciI TCATGA 1 cut(s) 247
CfoI GCGC 3 cut(s) 85, 453, 676
Cfr13I GGNCC 8 cut(s) 308, 341, 458, 478, 662, 1360, 1439, 1532
CseI GACGC 1 cut(s) 1501
Csp6I GTAC 5 cut(s) 217, 1173, 1262, 1271, 1371
CviAII CATG 8 cut(s) 248, 414, 715, 875, 950, 1141, 1304, 1313
CviQI GTAC 5 cut(s) 217, 1173, 1262, 1271, 1371
DpnI GATC 5 cut(s) 252, 738, 762, 1284, 1402
DpnII GATC 5 cut(s) 250, 736, 760, 1282, 1400
Eam1104I CTCTTC 2 cut(s) 97, 876
EarI CTCTTC 2 cut(s) 97, 876
Ecl136II GAGCTC 1 cut(s) 1387
Eco105I TACGTA 1 cut(s) 749
Eco24I GRGCYC 1 cut(s) 1389
Eco32I GATATC 1 cut(s) 1257
Eco47I GGWCC 5 cut(s) 458, 478, 662, 1360, 1439
Eco47III AGCGCT 1 cut(s) 675
Eco53kI GAGCTC 1 cut(s) 1387
Eco57I CTGAAG 1 cut(s) 453
Eco81I CCTNAGG 2 cut(s) 345, 666
EcoICRI GAGCTC 1 cut(s) 1387
EcoO109I RGGNCCY 3 cut(s) 341, 478, 662
EcoRI GAATTC 1 cut(s) 1191
EcoRII CCWGG 7 cut(s) 139, 847, 1294, 1324, 1441, 1564, 1618
EcoRV GATATC 1 cut(s) 1257
EcoT22I ATGCAT 3 cut(s) 379, 1048, 1146
EcoT38I GRGCYC 1 cut(s) 1389
FaeI CATG 8 cut(s) 251, 417, 718, 878, 953, 1144, 1307, 1316
FalI AAGNNNNNCTT 4 cut(s) 216, 248, 922, 954
FaqI GGGAC 4 cut(s) 444, 675, 1070, 1616
FatI CATG 8 cut(s) 247, 413, 714, 874, 949, 1140, 1303, 1312
FauI CCCGC 1 cut(s) 1422
FauNDI CATATG 1 cut(s) 1528
FblI GTMKAC 2 cut(s) 423, 802
Fnu4HI GCNGC 4 cut(s) 267, 555, 558, 1644
FokI GGATG 3 cut(s) 386, 430, 545
FriOI GRGCYC 1 cut(s) 1389
Fsp4HI GCNGC 4 cut(s) 267, 555, 558, 1644
FspBI CTAG 5 cut(s) 51, 213, 621, 1647, 1673
GlaI GCGC 3 cut(s) 84, 452, 675
GluI GCNGC 4 cut(s) 267, 555, 558, 1644
GsaI CCCAGC 1 cut(s) 786
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 1 cut(s) 677
HaeIII GGCC 4 cut(s) 309, 342, 350, 1534
HapII CCGG 4 cut(s) 201, 258, 306, 1280
HgaI GACGC 1 cut(s) 1501
HhaI GCGC 3 cut(s) 85, 453, 676
Hin1II CATG 8 cut(s) 251, 417, 718, 878, 953, 1144, 1307, 1316
Hin6I GCGC 3 cut(s) 83, 451, 674
HinP1I GCGC 3 cut(s) 83, 451, 674
HindIII AAGCTT 1 cut(s) 524
HpaII CCGG 4 cut(s) 201, 258, 306, 1280
HphI GGTGA 3 cut(s) 395, 449, 799
Hpy166II GTNNAC 5 cut(s) 424, 803, 1007, 1173, 1271
Hpy188I TCNGA 6 cut(s) 68, 587, 709, 1405, 1581, 1721
Hpy188III TCNNGA 6 cut(s) 248, 371, 512, 860, 1280, 1703
Hpy8I GTNNAC 5 cut(s) 424, 803, 1007, 1173, 1271
HpyAV CCTTC 5 cut(s) 428, 924, 1021, 1147, 1506
HpyCH4III ACNGT 2 cut(s) 977, 1364
HpyCH4IV ACGT 2 cut(s) 748, 1018
HpyF10VI GCNNNNNNNGC 8 cut(s) 563, 626, 680, 1028, 1544, 1643, 1652, 1661
HpySE526I ACGT 2 cut(s) 748, 1018
Hsp92II CATG 8 cut(s) 251, 417, 718, 878, 953, 1144, 1307, 1316
HspAI GCGC 3 cut(s) 83, 451, 674
Kpn2I TCCGGA 1 cut(s) 1279
KpnI GGTACC 1 cut(s) 220
Kzo9I GATC 5 cut(s) 250, 736, 760, 1282, 1400
LmnI GCTCC 4 cut(s) 617, 634, 671, 1426
Lsp1109I GCAGC 4 cut(s) 253, 544, 566, 1630
LweI GCATC 8 cut(s) 364, 523, 1055, 1153, 1153, 1222, 1504, 1696
MaeI CTAG 5 cut(s) 51, 213, 621, 1647, 1673
MaeII ACGT 2 cut(s) 748, 1018
MalI GATC 5 cut(s) 252, 738, 762, 1284, 1402
MbiI CCGCTC 1 cut(s) 1429
MboI GATC 5 cut(s) 250, 736, 760, 1282, 1400
MboII GAAGA 6 cut(s) 84, 533, 863, 1139, 1313, 1499
MfeI CAATTG 1 cut(s) 1710
MflI RGATCY 4 cut(s) 736, 760, 1282, 1400
MhlI GDGCHC 3 cut(s) 1389, 1435, 1572
MluCI AATT 9 cut(s) 296, 390, 440, 751, 960, 1010, 1191, 1666, 1710
MlyI GAGTC 5 cut(s) 253, 296, 713, 1550, 1638
MmeI TCCRAC 1 cut(s) 58
Mph1103I ATGCAT 3 cut(s) 379, 1048, 1146
MroI TCCGGA 1 cut(s) 1279
MroXI GAANNNNTTC 3 cut(s) 91, 934, 1086
MseI TTAA 2 cut(s) 285, 641
MslI CAYNNNNRTG 2 cut(s) 879, 1051
MspA1I CMGCKG 1 cut(s) 557
MspI CCGG 4 cut(s) 201, 258, 306, 1280
MspR9I CCNGG 9 cut(s) 141, 202, 258, 849, 1296, 1326, 1443, 1566, 1620
MunI CAATTG 1 cut(s) 1710
Mva1269I GAATGC 1 cut(s) 918
MvaI CCWGG 7 cut(s) 141, 849, 1296, 1326, 1443, 1566, 1620
MvnI CGCG 2 cut(s) 85, 451
MwoI GCNNNNNNNGC 8 cut(s) 563, 626, 680, 1028, 1544, 1643, 1652, 1661
NciI CCSGG 2 cut(s) 202, 258
NdeI CATATG 1 cut(s) 1528
NdeII GATC 5 cut(s) 250, 736, 760, 1282, 1400
NheI GCTAGC 1 cut(s) 50
NlaIII CATG 8 cut(s) 251, 417, 718, 878, 953, 1144, 1307, 1316
NlaIV GGNNCC 7 cut(s) 218, 460, 663, 682, 1290, 1517, 1654
NsiI ATGCAT 3 cut(s) 379, 1048, 1146
NspI RCATGY 2 cut(s) 1307, 1316
NspV TTCGAA 1 cut(s) 1510
PaeI GCATGC 1 cut(s) 1316
PagI TCATGA 1 cut(s) 247
PciI ACATGT 1 cut(s) 1303
PcsI WCGNNNNNNNCGW 1 cut(s) 1516
PctI GAATGC 1 cut(s) 918
PdmI GAANNNNTTC 3 cut(s) 91, 934, 1086
PfeI GAWTC 5 cut(s) 410, 1133, 1582, 1607, 1716
PfoI TCCNGGA 1 cut(s) 1324
PkrI GCNGC 4 cut(s) 268, 556, 559, 1645
PleI GAGTC 5 cut(s) 252, 296, 713, 1550, 1637
PpsI GAGTC 5 cut(s) 252, 296, 713, 1550, 1637
Ppu21I YACGTR 2 cut(s) 749, 1019
PpuMI RGGWCCY 2 cut(s) 478, 662
PscI ACATGT 1 cut(s) 1303
Psp124BI GAGCTC 1 cut(s) 1389
Psp5II RGGWCCY 2 cut(s) 478, 662
Psp6I CCWGG 7 cut(s) 139, 847, 1294, 1324, 1441, 1564, 1618
PspFI CCCAGC 1 cut(s) 782
PspGI CCWGG 7 cut(s) 139, 847, 1294, 1324, 1441, 1564, 1618
PspN4I GGNNCC 7 cut(s) 218, 460, 663, 682, 1290, 1517, 1654
PspPI GGNCC 8 cut(s) 308, 341, 458, 478, 662, 1360, 1439, 1532
PspPPI RGGWCCY 2 cut(s) 478, 662
PstI CTGCAG 3 cut(s) 27, 556, 1639
PstNI CAGNNNCTG 3 cut(s) 155, 1331, 1643
PsuI RGATCY 4 cut(s) 736, 760, 1282, 1400
PvuII CAGCTG 1 cut(s) 557
RsaI GTAC 5 cut(s) 218, 1174, 1263, 1272, 1372
RsaNI GTAC 5 cut(s) 217, 1173, 1262, 1271, 1371
RseI CAYNNNNRTG 2 cut(s) 879, 1051
SacI GAGCTC 1 cut(s) 1389
SaqAI TTAA 2 cut(s) 285, 641
SatI GCNGC 4 cut(s) 267, 555, 558, 1644
Sau3AI GATC 5 cut(s) 250, 736, 760, 1282, 1400
Sau96I GGNCC 8 cut(s) 308, 341, 458, 478, 662, 1360, 1439, 1532
ScaI AGTACT 1 cut(s) 1372
SchI GAGTC 5 cut(s) 253, 296, 713, 1550, 1638
ScrFI CCNGG 9 cut(s) 141, 202, 258, 849, 1296, 1326, 1443, 1566, 1620
SduI GDGCHC 3 cut(s) 1389, 1435, 1572
SfaNI GCATC 8 cut(s) 364, 523, 1055, 1153, 1153, 1222, 1504, 1696
SfcI CTRYAG 3 cut(s) 23, 552, 1635
SfuI TTCGAA 1 cut(s) 1510
SinI GGWCC 5 cut(s) 458, 478, 662, 1360, 1439
SmiMI CAYNNNNRTG 2 cut(s) 879, 1051
SmlI CTYRAG 1 cut(s) 482
SmoI CTYRAG 1 cut(s) 482
SnaBI TACGTA 1 cut(s) 749
SpeI ACTAGT 1 cut(s) 1672
SphI GCATGC 1 cut(s) 1316
Sse9I AATT 9 cut(s) 296, 390, 440, 751, 960, 1010, 1191, 1666, 1710
SsiI CCGC 3 cut(s) 261, 833, 1429
SspMI CTAG 5 cut(s) 51, 213, 621, 1647, 1673
SstI GAGCTC 1 cut(s) 1389
StyD4I CCNGG 9 cut(s) 139, 200, 256, 847, 1294, 1324, 1441, 1564, 1618
TaaI ACNGT 2 cut(s) 977, 1364
TaiI ACGT 2 cut(s) 751, 1021
TaqI TCGA 2 cut(s) 979, 1510
TasI AATT 9 cut(s) 296, 390, 440, 751, 960, 1010, 1191, 1666, 1710
TatI WGTACW 2 cut(s) 1270, 1370
TfiI GAWTC 5 cut(s) 410, 1133, 1582, 1607, 1716
Tru1I TTAA 2 cut(s) 285, 641
Tru9I TTAA 2 cut(s) 285, 641
TscAI CASTG 1 cut(s) 991
TseI GCWGC 4 cut(s) 266, 554, 557, 1643
TspDTI ATGAA 6 cut(s) 264, 402, 863, 1129, 1139, 1184
TspRI CASTG 1 cut(s) 991
VpaK11BI GGWCC 5 cut(s) 458, 478, 662, 1360, 1439
XapI RAATTY 2 cut(s) 440, 1191
XceI RCATGY 2 cut(s) 1307, 1316
XmiI GTMKAC 2 cut(s) 423, 802
XmnI GAANNNNTTC 3 cut(s) 91, 934, 1086
XspI CTAG 5 cut(s) 51, 213, 621, 1647, 1673
ZrmI AGTACT 1 cut(s) 1372
Zsp2I ATGCAT 3 cut(s) 379, 1048, 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.