Rmu_ssc0000189.1_g000043

Flavin containing amine oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000189.1
OG0016601
Physical Location & Seq
Reverse (-)
276989 .. 282217
5229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000189.1_g000043.1.cds

Sequence Viewer

Length: 2400 bp
atgttcactgtcctatgtggcaaccccgagtcttctttcacgtctgacagacggacgtcagttggtgatataatctataatttgaaaggttgtggagcttgtgcttcacaagtgcacaccgttgctgctttctcatggctgctaattaaagaggcacttgagaacactgagccttatcaattgtctactgtggcggcaatgtcctcattcccaaatactctgcagtttctccaacctctttctcacgctagcaccaaatccctcagaaaatcagttttggcgcgaaactcttcaaatggctctgtctccctcaaacaaatcaaaactaccccactcccaggcaaagcagaggctgatgttgtagtcattgggagtggtataggtggattgtgttgtgccgggctattagctaggtaccagcaagatgtccttgtcttagagagtcatgatctacccggcggtgctgctcattcatttgagattaaaggctttcaatttgactccggcccatctttgactgtgagcttgagacggacgtcagttggtgatttaatctataatttgaaaggttgtggagcttgtgcttcacgagtgcacaccgttgctgctttctcatggctgccaattaaagaggcacttgagaacactgagccttatcaattgtcaactgtggcggcaatgtcctcgttcccaaatactctgcagtttctccaacctctttctcacgctagcaccaaatccctcagaaaatcagttttggcgcgaaactcttcaaatggctctgtctccctcaaacaaatcaaaactaccccactcccaggcaaagcagaggctgatgttgtagtcattgggagtggtataggtggattgtgttgtgccgggctattagctaggtaccagcaagatgtccttgtcttagagagtcatgatctacccggcggtgctgctcattcatttgagattaaaggctttcaatttgactccggcccatctttgttctctggttttcaatccaaaggccctcaggccaatcctcttggacaagttctggatgcattgggtgagacaattccttgtgccagttatgattcatggatggtctacctacctgaaggtgaatttctgtcgcgcattggtcccacagactttttcaaggaccttgagaagtatgcaagtgcaaatgctgttcaagaatggaaaaagcttttggatgccattcttccaatgtctgcagctgcaatggctctgcctccactttctatccgaggggatttgggtgttctttctactgctggagctagatatgctccctctctattaaaatcttttgctcaaatgggacctaagggagcgcttggtgccacaaagctactaagaccattttcagaaatcatggactcattagaactgaaagatccctttatacgtaattgggtggatctactggctttcttgcttgctggggtgaaatctaatggtatactttcagcagagatggtttatatgtttgcggagtggtataagccaggttgctgtcttgaataccctcttcatggaagtggtgcagttgttgaagctcttgttcggggaatgcagaagtttggtggaaggatttctttaggaagtcatgtggaaaaaattgttgttgaaaacggtcgagccactggggtcaagctaagaagtggacaatttatacgtgctaagaaggctgttgttagtaatgcatctatgtgggacactctaaatctattacctaaagaaattgttccaaagtcatacgagaaaaggattgagatgacccctcaatgtgaatccttcatgcatcttcatttgggatttgatgctgagtgtacgcataaagacttaggaattcatcatatagttgtcaatgattgggatagaggggttgatgctgaccagaatgttgttttgatatctgtaccaagtgtactaagtccggatctggcaccacctgggaaacatgtcttgcatgcctatcttccaggaactgaaccctttgatttgtggaaaggattggaccgtaaaagtactgcatacaaagagctcaaagctgaaagatccgaggttatgtggagagctgtggagcgggcacttggtcctgggtttagccgtgaaaaatgcgaggtcaagttagttggttctccattgacgcatcaaagatttcttcgaaggaaccgaggaacatatgggccagcagtagaagctggtaaagactctattcctgggcactccactccgattcctcaactttattgctgtggagattctacttttcctggcattggagtccctgcagttgctgctagtggtgccattgttgccaattcactagtttctgttgctcaacactctcaacttcttgatgcaattggaatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Amino_oxidase NAD_binding_8

Protein Analysis

799

Amino Acids

85.76

Weight (kDa)

8.18

Isoelectric Point (pI)

35.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016601)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57770
fragaria_vesca FvH4_5g28280
malus_domestica MD08G1243700.v1.1
prunus_persica Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1
pyrus_communis pycom08g21140
rosa_chinensis RchiOBHm_Chr7g0220531
rosa_laevigata RLG00000002219
rosa_multiflora Rmu_ssc0000189.1_g000043
rosa_roxburghii Rroxscaffold_3G00239320
rosa_rugosa Rorug07G0194400
rosa_samantha Rh7DG332000
rosa_wichuraiana Rw7G028590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 59, 539
Acc65I GGTACC 2 cut(s) 414, 894
AccB1I GGYRCC 5 cut(s) 414, 894, 1358, 1966, 2330
AccBSI CCGCTC 1 cut(s) 2107
AccI GTMKAC 3 cut(s) 185, 1101, 1480
AccII CGCG 3 cut(s) 283, 763, 1129
AccIII TCCGGA 1 cut(s) 1957
AciI CCGC 6 cut(s) 194, 459, 674, 939, 1511, 2107
AclWI GGATC 4 cut(s) 1409, 1446, 1968, 2073
AcsI RAATTY 2 cut(s) 1118, 1869
AcuI CTGAAG 1 cut(s) 1131
AcyI GRCGYC 2 cut(s) 56, 536
AfaI GTAC 6 cut(s) 416, 896, 1852, 1941, 1950, 2050
AfeI AGCGCT 1 cut(s) 1353
AfiI CCNNNNNNNGG 4 cut(s) 338, 818, 1553, 2303
AflIII ACRYGT 1 cut(s) 1981
AhlI ACTAGT 1 cut(s) 2350
AjiI CACGTC 1 cut(s) 42
AjnI CCWGG 8 cut(s) 337, 817, 1525, 1972, 2002, 2119, 2242, 2296
AjuI GAANNNNNNNTTGG 2 cut(s) 1190, 1222
Alw21I GWGCWC 3 cut(s) 117, 597, 2067
Alw26I GTCTC 4 cut(s) 310, 523, 790, 1058
Alw44I GTGCAC 2 cut(s) 113, 593
AlwI GGATC 4 cut(s) 1409, 1446, 1968, 2073
AlwNI CAGNNNCTG 4 cut(s) 353, 833, 2009, 2321
Ama87I CYCGRG 1 cut(s) 26
Aor13HI TCCGGA 1 cut(s) 1957
Aor51HI AGCGCT 1 cut(s) 1353
AoxI GGCC 5 cut(s) 505, 985, 1018, 1026, 2210
ApaLI GTGCAC 2 cut(s) 113, 593
ApeKI GCWGC 9 cut(s) 125, 139, 464, 605, 619, 944, 1232, 1235, 2321
ApoI RAATTY 2 cut(s) 1118, 1869
Asp700I GAANNNNTTC 4 cut(s) 289, 769, 1612, 1764
Asp718I GGTACC 2 cut(s) 414, 894
AspLEI GCGC 4 cut(s) 283, 763, 1131, 1354
AspS9I GGNCC 9 cut(s) 506, 986, 1019, 1136, 1156, 1340, 2038, 2117, 2210
AsuC2I CCSGG 4 cut(s) 400, 456, 880, 936
AsuHPI GGTGA 5 cut(s) 77, 557, 1073, 1127, 1477
AsuII TTCGAA 1 cut(s) 2188
AsuNHI GCTAGC 2 cut(s) 248, 728
AvaI CYCGRG 1 cut(s) 26
AvaII GGWCC 5 cut(s) 1136, 1156, 1340, 2038, 2117
AxyI CCTNAGG 2 cut(s) 1023, 1344
BaeGI GKGCMC 4 cut(s) 117, 597, 2113, 2250
BanI GGYRCC 5 cut(s) 414, 894, 1358, 1966, 2330
BanII GRGCYC 1 cut(s) 2067
BauI CACGAG 1 cut(s) 588
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 3 cut(s) 117, 597, 2067
BbvI GCAGC 9 cut(s) 112, 126, 451, 592, 606, 931, 1222, 1244, 2308
BccI CCATC 4 cut(s) 517, 997, 1090, 1489
BceAI ACGGC 1 cut(s) 2115
BcgI CGANNNNNNTGC 2 cut(s) 666, 700
BciT130I CCWGG 8 cut(s) 339, 819, 1527, 1974, 2004, 2121, 2244, 2298
BcnI CCSGG 4 cut(s) 400, 456, 880, 936
BcoDI GTCTC 4 cut(s) 310, 523, 790, 1058
BcuI ACTAGT 1 cut(s) 2350
BfaI CTAG 7 cut(s) 249, 411, 729, 891, 1299, 2325, 2351
BfmI CTRYAG 4 cut(s) 221, 701, 1230, 2313
BfoI RGCGCY 1 cut(s) 1355
BmcAI AGTACT 1 cut(s) 2050
Bme18I GGWCC 5 cut(s) 1136, 1156, 1340, 2038, 2117
BmeT110I CYCGRG 1 cut(s) 26
BmgBI CACGTC 1 cut(s) 42
BmgT120I GGNCC 9 cut(s) 506, 986, 1019, 1136, 1156, 1340, 2038, 2117, 2210
BmiI GGNNCC 8 cut(s) 416, 896, 1138, 1341, 1360, 1968, 2195, 2332
BmrI ACTGGG 1 cut(s) 1674
BmsI GCATC 8 cut(s) 1042, 1201, 1733, 1831, 1831, 1900, 2182, 2374
BmtI GCTAGC 2 cut(s) 252, 732
BmuI ACTGGG 1 cut(s) 1674
BoxI GACNNNNGTC 2 cut(s) 55, 535
BpiI GAAGAC 1 cut(s) 24
BpmI CTGGAG 1 cut(s) 1314
Bpu14I TTCGAA 1 cut(s) 2188
BpuEI CTTGAG 4 cut(s) 179, 547, 659, 1181
BpuMI CCSGG 4 cut(s) 400, 456, 880, 936
BsaAI YACGTR 2 cut(s) 1427, 1697
BsaHI GRCGYC 2 cut(s) 56, 536
BsaJI CCNNGG 8 cut(s) 337, 817, 1264, 1973, 2082, 2120, 2197, 2243
BsaWI WCCGGW 1 cut(s) 1957
Bsc4I CCNNNNNNNGG 4 cut(s) 338, 818, 1553, 2303
Bse1I ACTGG 3 cut(s) 1080, 1449, 1669
Bse21I CCTNAGG 2 cut(s) 1023, 1344
Bse3DI GCAATG 3 cut(s) 204, 684, 1245
BseAI TCCGGA 1 cut(s) 1957
BseBI CCWGG 8 cut(s) 339, 819, 1527, 1974, 2004, 2121, 2244, 2298
BseDI CCNNGG 8 cut(s) 337, 817, 1264, 1973, 2082, 2120, 2197, 2243
BseGI GGATG 3 cut(s) 1057, 1101, 1216
BseLI CCNNNNNNNGG 4 cut(s) 338, 818, 1553, 2303
BseMI GCAATG 3 cut(s) 204, 684, 1245
BseMII CTCAG 6 cut(s) 159, 277, 639, 757, 1037, 1836
BseNI ACTGG 3 cut(s) 1080, 1449, 1669
BseSI GKGCMC 4 cut(s) 117, 597, 2113, 2250
BseXI GCAGC 9 cut(s) 112, 126, 451, 592, 606, 931, 1222, 1244, 2308
BseYI CCCAGC 1 cut(s) 1460
BsgI GTGCAG 1 cut(s) 1584
Bsh1236I CGCG 3 cut(s) 283, 763, 1129
Bsh1285I CGRYCG 1 cut(s) 1657
BshFI GGCC 5 cut(s) 507, 987, 1020, 1028, 2212
BshNI GGYRCC 5 cut(s) 414, 894, 1358, 1966, 2330
BsiEI CGRYCG 1 cut(s) 1657
BsiHKAI GWGCWC 3 cut(s) 117, 597, 2067
BsiHKCI CYCGRG 1 cut(s) 26
BsiSI CCGG 7 cut(s) 399, 456, 504, 879, 936, 984, 1958
BslFI GGGAC 4 cut(s) 1122, 1353, 1748, 2294
BslI CCNNNNNNNGG 4 cut(s) 338, 818, 1553, 2303
BsmAI GTCTC 4 cut(s) 310, 523, 790, 1058
BsmBI CGTCTC 1 cut(s) 523
BsmFI GGGAC 4 cut(s) 1122, 1353, 1748, 2294
BsmI GAATGC 1 cut(s) 1596
BsnI GGCC 5 cut(s) 507, 987, 1020, 1028, 2212
BsoBI CYCGRG 1 cut(s) 26
Bsp119I TTCGAA 1 cut(s) 2188
Bsp1286I GDGCHC 5 cut(s) 117, 597, 2067, 2113, 2250
Bsp13I TCCGGA 1 cut(s) 1957
Bsp143I GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
BspACI CCGC 6 cut(s) 194, 459, 674, 939, 1511, 2107
BspANI GGCC 5 cut(s) 507, 987, 1020, 1028, 2212
BspCNI CTCAG 6 cut(s) 160, 276, 640, 756, 1036, 1837
BspEI TCCGGA 1 cut(s) 1957
BspFNI CGCG 3 cut(s) 283, 763, 1129
BspHI TCATGA 2 cut(s) 445, 925
BspLI GGNNCC 8 cut(s) 416, 896, 1138, 1341, 1360, 1968, 2195, 2332
BspMAI CTGCAG 4 cut(s) 225, 705, 1234, 2317
BspOI GCTAGC 2 cut(s) 252, 732
BspPI GGATC 4 cut(s) 1409, 1446, 1968, 2073
BspT104I TTCGAA 1 cut(s) 2188
BspT107I GGYRCC 5 cut(s) 414, 894, 1358, 1966, 2330
BsrBI CCGCTC 1 cut(s) 2107
BsrDI GCAATG 3 cut(s) 204, 684, 1245
BsrI ACTGG 3 cut(s) 1080, 1449, 1669
BssECI CCNNGG 8 cut(s) 337, 817, 1264, 1973, 2082, 2120, 2197, 2243
BssMI GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
BssNAI GTATAC 1 cut(s) 1481
BssNI GRCGYC 2 cut(s) 56, 536
BssSI CACGAG 1 cut(s) 588
Bst1107I GTATAC 1 cut(s) 1481
Bst2BI CACGAG 1 cut(s) 588
Bst2UI CCWGG 8 cut(s) 339, 819, 1527, 1974, 2004, 2121, 2244, 2298
Bst4CI ACNGT 8 cut(s) 10, 121, 190, 520, 601, 670, 1655, 2042
Bst6I CTCTTC 3 cut(s) 295, 775, 1554
BstACI GRCGYC 2 cut(s) 56, 536
BstAPI GCANNNNNTGC 1 cut(s) 2321
BstBAI YACGTR 2 cut(s) 1427, 1697
BstBI TTCGAA 1 cut(s) 2188
BstC8I GCNNGC 6 cut(s) 250, 730, 1458, 1992, 2109, 2214
BstF5I GGATG 3 cut(s) 1057, 1101, 1216
BstFNI CGCG 3 cut(s) 283, 763, 1129
BstH2I RGCGCY 1 cut(s) 1355
BstHHI GCGC 4 cut(s) 283, 763, 1131, 1354
BstKTI GATC 6 cut(s) 451, 931, 1417, 1441, 1963, 2081
BstMAI GTCTC 4 cut(s) 310, 523, 790, 1058
BstMBI GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
BstMCI CGRYCG 1 cut(s) 1657
BstMWI GCNNNNNNNGC 8 cut(s) 1241, 1304, 1358, 1706, 2222, 2321, 2330, 2339
BstNI CCWGG 8 cut(s) 339, 819, 1527, 1974, 2004, 2121, 2244, 2298
BstNSI RCATGY 2 cut(s) 1985, 1994
BstPAI GACNNNNGTC 2 cut(s) 55, 535
BstSFI CTRYAG 4 cut(s) 221, 701, 1230, 2313
BstSLI GKGCMC 4 cut(s) 117, 597, 2113, 2250
BstSNI TACGTA 1 cut(s) 1427
BstUI CGCG 3 cut(s) 283, 763, 1129
BstV1I GCAGC 9 cut(s) 112, 126, 451, 592, 606, 931, 1222, 1244, 2308
BstV2I GAAGAC 1 cut(s) 24
BstX2I RGATCY 4 cut(s) 1414, 1438, 1960, 2078
BstYI RGATCY 4 cut(s) 1414, 1438, 1960, 2078
BstZ17I GTATAC 1 cut(s) 1481
Bsu36I CCTNAGG 2 cut(s) 1023, 1344
BsuRI GGCC 5 cut(s) 507, 987, 1020, 1028, 2212
BtrI CACGTC 1 cut(s) 42
BtsCI GGATG 3 cut(s) 1057, 1101, 1216
BtsIMutI CAGTG 4 cut(s) 6, 165, 645, 1662
Cac8I GCNNGC 6 cut(s) 250, 730, 1458, 1992, 2109, 2214
CaiI CAGNNNCTG 4 cut(s) 353, 833, 2009, 2321
CciI TCATGA 2 cut(s) 445, 925
CfoI GCGC 4 cut(s) 283, 763, 1131, 1354
Cfr13I GGNCC 9 cut(s) 506, 986, 1019, 1136, 1156, 1340, 2038, 2117, 2210
CseI GACGC 1 cut(s) 2179
Csp6I GTAC 6 cut(s) 415, 895, 1851, 1940, 1949, 2049
CviQI GTAC 6 cut(s) 415, 895, 1851, 1940, 1949, 2049
DpnI GATC 6 cut(s) 450, 930, 1416, 1440, 1962, 2080
DpnII GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
Eam1104I CTCTTC 3 cut(s) 295, 775, 1554
EarI CTCTTC 3 cut(s) 295, 775, 1554
Ecl136II GAGCTC 1 cut(s) 2065
Eco105I TACGTA 1 cut(s) 1427
Eco24I GRGCYC 1 cut(s) 2067
Eco32I GATATC 1 cut(s) 1935
Eco47I GGWCC 5 cut(s) 1136, 1156, 1340, 2038, 2117
Eco47III AGCGCT 1 cut(s) 1353
Eco53kI GAGCTC 1 cut(s) 2065
Eco57I CTGAAG 1 cut(s) 1131
Eco81I CCTNAGG 2 cut(s) 1023, 1344
Eco88I CYCGRG 1 cut(s) 26
EcoICRI GAGCTC 1 cut(s) 2065
EcoO109I RGGNCCY 3 cut(s) 1019, 1156, 1340
EcoRI GAATTC 1 cut(s) 1869
EcoRII CCWGG 8 cut(s) 337, 817, 1525, 1972, 2002, 2119, 2242, 2296
EcoRV GATATC 1 cut(s) 1935
EcoT22I ATGCAT 3 cut(s) 1057, 1726, 1824
EcoT38I GRGCYC 1 cut(s) 2067
Esp3I CGTCTC 1 cut(s) 523
FaqI GGGAC 4 cut(s) 1122, 1353, 1748, 2294
FauI CCCGC 1 cut(s) 2100
FauNDI CATATG 1 cut(s) 2206
FblI GTMKAC 3 cut(s) 185, 1101, 1480
FokI GGATG 3 cut(s) 1064, 1108, 1223
FriOI GRGCYC 1 cut(s) 2067
FspBI CTAG 7 cut(s) 249, 411, 729, 891, 1299, 2325, 2351
GlaI GCGC 4 cut(s) 282, 762, 1130, 1353
GsaI CCCAGC 1 cut(s) 1464
GsuI CTGGAG 1 cut(s) 1314
HaeII RGCGCY 1 cut(s) 1355
HaeIII GGCC 5 cut(s) 507, 987, 1020, 1028, 2212
HapII CCGG 7 cut(s) 399, 456, 504, 879, 936, 984, 1958
HgaI GACGC 1 cut(s) 2179
HhaI GCGC 4 cut(s) 283, 763, 1131, 1354
Hin1I GRCGYC 2 cut(s) 56, 536
Hin6I GCGC 4 cut(s) 281, 761, 1129, 1352
HinP1I GCGC 4 cut(s) 281, 761, 1129, 1352
HincII GTYRAC 1 cut(s) 666
HindII GTYRAC 1 cut(s) 666
HindIII AAGCTT 1 cut(s) 1202
HpaII CCGG 7 cut(s) 399, 456, 504, 879, 936, 984, 1958
HphI GGTGA 5 cut(s) 77, 557, 1073, 1127, 1477
Hpy188I TCNGA 8 cut(s) 46, 266, 746, 1265, 1387, 2083, 2259, 2399
Hpy188III TCNNGA 8 cut(s) 446, 588, 926, 1049, 1190, 1538, 1958, 2381
HpyAV CCTTC 5 cut(s) 1106, 1602, 1699, 1825, 2184
HpyCH4III ACNGT 8 cut(s) 10, 121, 190, 520, 601, 670, 1655, 2042
HpyCH4IV ACGT 5 cut(s) 41, 56, 536, 1426, 1696
HpyF10VI GCNNNNNNNGC 8 cut(s) 1241, 1304, 1358, 1706, 2222, 2321, 2330, 2339
HpySE526I ACGT 5 cut(s) 41, 56, 536, 1426, 1696
Hsp92I GRCGYC 2 cut(s) 56, 536
HspAI GCGC 4 cut(s) 281, 761, 1129, 1352
Kpn2I TCCGGA 1 cut(s) 1957
KpnI GGTACC 2 cut(s) 418, 898
Kzo9I GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
LmnI GCTCC 6 cut(s) 95, 575, 1295, 1312, 1349, 2104
Lsp1109I GCAGC 9 cut(s) 112, 126, 451, 592, 606, 931, 1222, 1244, 2308
LweI GCATC 8 cut(s) 1042, 1201, 1733, 1831, 1831, 1900, 2182, 2374
MaeI CTAG 7 cut(s) 249, 411, 729, 891, 1299, 2325, 2351
MaeII ACGT 5 cut(s) 41, 56, 536, 1426, 1696
MalI GATC 6 cut(s) 450, 930, 1416, 1440, 1962, 2080
MbiI CCGCTC 1 cut(s) 2107
MboI GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
MboII GAAGA 8 cut(s) 24, 282, 762, 1211, 1541, 1817, 1991, 2177
MfeI CAATTG 3 cut(s) 179, 659, 2388
MflI RGATCY 4 cut(s) 1414, 1438, 1960, 2078
MhlI GDGCHC 5 cut(s) 117, 597, 2067, 2113, 2250
MlyI GAGTC 8 cut(s) 38, 451, 494, 931, 974, 1391, 2228, 2316
MmeI TCCRAC 2 cut(s) 256, 736
Mph1103I ATGCAT 3 cut(s) 1057, 1726, 1824
MroI TCCGGA 1 cut(s) 1957
MroXI GAANNNNTTC 4 cut(s) 289, 769, 1612, 1764
MseI TTAA 6 cut(s) 147, 483, 551, 627, 963, 1319
MslI CAYNNNNRTG 2 cut(s) 1557, 1729
MspA1I CMGCKG 1 cut(s) 1235
MspI CCGG 7 cut(s) 399, 456, 504, 879, 936, 984, 1958
MunI CAATTG 3 cut(s) 179, 659, 2388
Mva1269I GAATGC 1 cut(s) 1596
MvaI CCWGG 8 cut(s) 339, 819, 1527, 1974, 2004, 2121, 2244, 2298
MvnI CGCG 3 cut(s) 283, 763, 1129
MwoI GCNNNNNNNGC 8 cut(s) 1241, 1304, 1358, 1706, 2222, 2321, 2330, 2339
NciI CCSGG 4 cut(s) 400, 456, 880, 936
NdeI CATATG 1 cut(s) 2206
NdeII GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
NheI GCTAGC 2 cut(s) 248, 728
NlaIV GGNNCC 8 cut(s) 416, 896, 1138, 1341, 1360, 1968, 2195, 2332
NsiI ATGCAT 3 cut(s) 1057, 1726, 1824
NspI RCATGY 2 cut(s) 1985, 1994
NspV TTCGAA 1 cut(s) 2188
PaeI GCATGC 1 cut(s) 1994
PagI TCATGA 2 cut(s) 445, 925
PciI ACATGT 1 cut(s) 1981
PcsI WCGNNNNNNNCGW 1 cut(s) 2194
PctI GAATGC 1 cut(s) 1596
PdmI GAANNNNTTC 4 cut(s) 289, 769, 1612, 1764
PfeI GAWTC 5 cut(s) 1088, 1811, 2260, 2285, 2394
PfoI TCCNGGA 1 cut(s) 2002
PleI GAGTC 8 cut(s) 37, 450, 494, 930, 974, 1391, 2228, 2315
PpsI GAGTC 8 cut(s) 37, 450, 494, 930, 974, 1391, 2228, 2315
Ppu21I YACGTR 2 cut(s) 1427, 1697
PpuMI RGGWCCY 2 cut(s) 1156, 1340
PscI ACATGT 1 cut(s) 1981
PshAI GACNNNNGTC 2 cut(s) 55, 535
Psp124BI GAGCTC 1 cut(s) 2067
Psp5II RGGWCCY 2 cut(s) 1156, 1340
Psp6I CCWGG 8 cut(s) 337, 817, 1525, 1972, 2002, 2119, 2242, 2296
PspFI CCCAGC 1 cut(s) 1460
PspGI CCWGG 8 cut(s) 337, 817, 1525, 1972, 2002, 2119, 2242, 2296
PspN4I GGNNCC 8 cut(s) 416, 896, 1138, 1341, 1360, 1968, 2195, 2332
PspPI GGNCC 9 cut(s) 506, 986, 1019, 1136, 1156, 1340, 2038, 2117, 2210
PspPPI RGGWCCY 2 cut(s) 1156, 1340
PstI CTGCAG 4 cut(s) 225, 705, 1234, 2317
PstNI CAGNNNCTG 4 cut(s) 353, 833, 2009, 2321
PsuI RGATCY 4 cut(s) 1414, 1438, 1960, 2078
PvuII CAGCTG 1 cut(s) 1235
RsaI GTAC 6 cut(s) 416, 896, 1852, 1941, 1950, 2050
RsaNI GTAC 6 cut(s) 415, 895, 1851, 1940, 1949, 2049
RseI CAYNNNNRTG 2 cut(s) 1557, 1729
SacI GAGCTC 1 cut(s) 2067
SaqAI TTAA 6 cut(s) 147, 483, 551, 627, 963, 1319
Sau3AI GATC 6 cut(s) 448, 928, 1414, 1438, 1960, 2078
Sau96I GGNCC 9 cut(s) 506, 986, 1019, 1136, 1156, 1340, 2038, 2117, 2210
ScaI AGTACT 1 cut(s) 2050
SchI GAGTC 8 cut(s) 38, 451, 494, 931, 974, 1391, 2228, 2316
SduI GDGCHC 5 cut(s) 117, 597, 2067, 2113, 2250
SfaNI GCATC 8 cut(s) 1042, 1201, 1733, 1831, 1831, 1900, 2182, 2374
SfcI CTRYAG 4 cut(s) 221, 701, 1230, 2313
SfuI TTCGAA 1 cut(s) 2188
SinI GGWCC 5 cut(s) 1136, 1156, 1340, 2038, 2117
SmiMI CAYNNNNRTG 2 cut(s) 1557, 1729
SmlI CTYRAG 4 cut(s) 158, 526, 638, 1160
SmoI CTYRAG 4 cut(s) 158, 526, 638, 1160
SnaBI TACGTA 1 cut(s) 1427
SpeI ACTAGT 1 cut(s) 2350
SphI GCATGC 1 cut(s) 1994
SsiI CCGC 6 cut(s) 194, 459, 674, 939, 1511, 2107
SspMI CTAG 7 cut(s) 249, 411, 729, 891, 1299, 2325, 2351
SstI GAGCTC 1 cut(s) 2067
TaaI ACNGT 8 cut(s) 10, 121, 190, 520, 601, 670, 1655, 2042
TaiI ACGT 5 cut(s) 44, 59, 539, 1429, 1699
TaqI TCGA 2 cut(s) 1657, 2188
TatI WGTACW 2 cut(s) 1948, 2048
TauI GCSGC 2 cut(s) 197, 677
TfiI GAWTC 5 cut(s) 1088, 1811, 2260, 2285, 2394
Tru1I TTAA 6 cut(s) 147, 483, 551, 627, 963, 1319
Tru9I TTAA 6 cut(s) 147, 483, 551, 627, 963, 1319
TscAI CASTG 4 cut(s) 13, 172, 652, 1669
TseI GCWGC 9 cut(s) 125, 139, 464, 605, 619, 944, 1232, 1235, 2321
TspDTI ATGAA 7 cut(s) 462, 942, 1080, 1541, 1807, 1817, 1862
TspGWI ACGGA 2 cut(s) 67, 547
TspRI CASTG 4 cut(s) 13, 172, 652, 1669
VneI GTGCAC 2 cut(s) 113, 593
VpaK11BI GGWCC 5 cut(s) 1136, 1156, 1340, 2038, 2117
XapI RAATTY 2 cut(s) 1118, 1869
XceI RCATGY 2 cut(s) 1985, 1994
XmiI GTMKAC 3 cut(s) 185, 1101, 1480
XmnI GAANNNNTTC 4 cut(s) 289, 769, 1612, 1764
XspI CTAG 7 cut(s) 249, 411, 729, 891, 1299, 2325, 2351
ZraI GACGTC 2 cut(s) 57, 537
ZrmI AGTACT 1 cut(s) 2050
Zsp2I ATGCAT 3 cut(s) 1057, 1726, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.