Rorug07G0194400

Flavin containing amine oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0016601
Physical Location & Seq
Reverse (-)
16563497 .. 16567657
4161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0194400.1

Sequence Viewer

Length: 2070 bp
ATGGCAGACACAAGGCCTTTGCTTCCTTGCGACCCCGATGCCCTTCCCACCGCCTACACTCCTCTCCCAGGCGGATCCTCCTCTCCGCAGATCCGGCGGATACACGTGAAGGAGGTTCTGGCTATGTTCGCCGGAGTGGTGATGGTTTCTTTGTTGGTGGTCATTATAGGGAATACAGGTCAGGATGGAAATGTGTACCATAGGAACAATAGGAGGGATAAGCCAATGTTATTGGCTGCTTCACCAACCAAGGAAACTGCCACCAAGGCAGAGAAGTTGCAGGCGGTGACACGTGGCATGGCGGCCGGAGTGTCGGAGAAATCGAGCCGGTTGTACAGCAGCGGCGTTGGTGAGGGCACGCCGGTGTATCCGTGGAACAATAGCATGTTGTCGTGGCAGAGGACTGCTTTCCATTTTCAGCCGGAGAAGAATTGGATGAATGGTCCATTATTCTACAAGGGTTGGTACCATTTTTTCTACCAGTACAATCCCAAAGCTGCAGTATGGGGAAACATAGTATGGGGTCATGCAGTATCCAGAGACTTGATCCATTGGCTTCACCTTCCTCTAGCAATGGTAGCTGATCAATGGTATGACATCAATGGAGTCTGGACTGGCTCGGCTACAATTCTCCCAAATGACCAAATTGTCATGCTCTACACTGGTTCAACCAATGAGTCAGTCCAGGTCCAATGTCTTGCATACCCTGCTGACCACAAAGACCCTCTCCTCACCAAGTGGGTCAAGTATTCCGGAAACCCGGTTCTAGTCCCCCCTCCCGGGATCGGAGTCAAGGACTTCCGGGACCCGACCACTGCTTGGTACACTACTGAAGGGAAATGGAGGATTACAATTGGGTCCAAGGTTAACAAAACTGGTATATCTTTGGTTTATGACACCAAGGACTTTATTAAGTATGAGCAACTAGATGGTGTGCTTCATGCTGTGCCTGGGACTGGAATGTGGGAATGTATCGATTTTTATCCGGTGTCGAAAATTAGTGACAAGGGGTTGGACACTTCTCAGAATGGGGCTGATGTGAAGCATGTGATGAAGACTAGTCTTGATGATGATAGGAATGATTACTATGCATTGGGGTCTTATAATGAGAAGACTGGAAAATGGGTTCCTGATAATCAAAAGATTGATGTTGGGATTGGGATTAGGTATGATTACGGGAAGTTCTATGCTTCCAAGACCTTCTATGATCAGAACAAGCAGAGAAGGGTGTTGTGGGGTTGGATTGGAGAGTCTGATAGTGAAAATGCTGATGTCAAGAAGGGTTGGGCATCTCTTCAGGGAATTCCAAGAACAGTGTTGTTTGATCAAAAGACTGGTAGCAATCTACTTCAATGGCCAGTGGAGGAGATTGAGAAATTGAGATTGAACAAGAAGAACTTCGACAAGGTACAAGTCAAGGCAGGGTCAGTGGTGCCACTTGACGTTGGCACAGCTACACAGTTGGACATTGTCGCCGAGTTTGAGTTGGATCAGAAGGTTGTAGAGAGCGCAGCTGAATCCAACGAGGAGTTCAGTTGCCAAACTAGTGGTGGAGCTGCCAAACGCGGCGCATTGGGACCCTTTGGTCTTGCTGTTCTTGCAGATGACAGCCTCTCTGAGCGCACTCCTGTCTACTTTTATGTTGTCAAAGGATCTGGTGGCACTGTCAATACCTACTTCTGTGCTGATCAAACAAGGTCTTCTGTGGCAACTGATGTTGTTAAACAAGTTAGTGGTAGCTATGTTCCAGTACTGAAAGGTGAAAAGCTATCTCTGAGAATGCTGGTTGATCATTCAATAATTGAAAGCTTTGCTCAAGGTGGACGAACAACGATAACAACGCGCGTTTACCCAACTCAGGCAATTTATGGAGCTGCAAGGCTCTTTTTGTTCAACAATGCTACTGACACCAGTGTTACTGCCTCACTCCAGATATGGCAGATGAACTCTGCATTCATACGTCCATTCTCACCTGATGCAGCGAGTCATGCAAGCTTCACCCCTGTTACAGTATTTATCAAATTCATCGTCCCATTTGGGATTTTTTTAACTTTATATTTTGTAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Amino_oxidase NAD_binding_8

Protein Analysis

689

Amino Acids

76.52

Weight (kDa)

8.27

Isoelectric Point (pI)

32.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
INV_N PF11837 19 - 130 1.1e-16 Beta-fructofuranosidase, N-terminal domain
Glyco_hydro_32N PF00251 138 - 453 2.4e-98 Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C PF08244 456 - 647 4.8e-25 Glycosyl hydrolases family 32 C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016601)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57770
fragaria_vesca FvH4_5g28280
malus_domestica MD08G1243700.v1.1
prunus_persica Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1 Prupe.1G581000_v2.0.a1
pyrus_communis pycom08g21140
rosa_chinensis RchiOBHm_Chr7g0220531
rosa_laevigata RLG00000002219
rosa_multiflora Rmu_ssc0000189.1_g000043
rosa_roxburghii Rroxscaffold_3G00239320
rosa_rugosa Rorug07G0194400
rosa_samantha Rh7DG332000
rosa_wichuraiana Rw7G028590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1104
AasI GACNNNNNNGTC 2 cut(s) 647, 1584
Acc65I GGTACC 1 cut(s) 465
AccB1I GGYRCC 2 cut(s) 465, 1432
AccB7I CCANNNNNTGG 1 cut(s) 819
AccI GTMKAC 1 cut(s) 1632
AccII CGCG 3 cut(s) 1566, 1843, 1845
AccIII TCCGGA 1 cut(s) 752
AciI CCGC 8 cut(s) 51, 72, 86, 97, 284, 302, 342, 1566
AclWI GGATC 7 cut(s) 69, 82, 85, 541, 791, 1497, 1660
AcoI YGGCCR 2 cut(s) 303, 1355
AcsI RAATTY 2 cut(s) 1302, 2021
AcuI CTGAAG 2 cut(s) 852, 1280
AcvI CACGTG 2 cut(s) 106, 293
AdeI CACNNNGTG 1 cut(s) 738
AfaI GTAC 7 cut(s) 197, 335, 467, 485, 824, 1410, 1752
AfiI CCNNNNNNNGG 7 cut(s) 68, 779, 780, 785, 819, 956, 1858
AflIII ACRYGT 2 cut(s) 103, 290
AgsI TTSAA 6 cut(s) 669, 1352, 1387, 1797, 1805, 1894
AhlI ACTAGT 2 cut(s) 1058, 1544
AjnI CCWGG 3 cut(s) 67, 684, 949
AjuI GAANNNNNNNTTGG 2 cut(s) 1514, 1546
AleI CACNNNNGTG 1 cut(s) 362
AloI GAACNNNNNNTCC 4 cut(s) 747, 779, 1110, 1142
Alw26I GTCTC 1 cut(s) 534
AlwI GGATC 7 cut(s) 69, 82, 85, 541, 791, 1497, 1660
Ama87I CYCGRG 1 cut(s) 779
Aor13HI TCCGGA 1 cut(s) 752
AoxI GGCC 3 cut(s) 14, 303, 1355
ApeKI GCWGC 7 cut(s) 236, 339, 497, 1511, 1556, 1874, 1979
ApoI RAATTY 2 cut(s) 1302, 2021
ArsI GACNNNNNNTTYG 2 cut(s) 2013, 2045
Asp700I GAANNNNTTC 1 cut(s) 1397
Asp718I GGTACC 1 cut(s) 465
AspLEI GCGC 4 cut(s) 1511, 1571, 1623, 1845
AspS9I GGNCC 5 cut(s) 443, 688, 805, 858, 1577
AsuC2I CCSGG 4 cut(s) 761, 780, 781, 803
AsuHPI GGTGA 9 cut(s) 151, 234, 298, 362, 551, 724, 1772, 1962, 1990
AvaI CYCGRG 1 cut(s) 779
AvaII GGWCC 5 cut(s) 443, 688, 805, 858, 1577
BaeGI GKGCMC 1 cut(s) 359
BalI TGGCCA 1 cut(s) 1357
BamHI GGATCC 1 cut(s) 74
BanI GGYRCC 2 cut(s) 465, 1432
BbrPI CACGTG 2 cut(s) 106, 293
BbsI GAAGAC 3 cut(s) 1061, 1118, 1692
BbvI GCAGC 7 cut(s) 223, 351, 484, 1523, 1543, 1861, 1991
BccI CCATC 3 cut(s) 136, 179, 923
BcgI CGANNNNNNTGC 2 cut(s) 20, 54
BciT130I CCWGG 3 cut(s) 69, 686, 951
BciVI GTATCC 3 cut(s) 93, 378, 544
BclI TGATCA 5 cut(s) 583, 1207, 1324, 1687, 1789
BcnI CCSGG 4 cut(s) 761, 780, 781, 803
BcoDI GTCTC 1 cut(s) 534
BcuI ACTAGT 2 cut(s) 1058, 1544
BfaI CTAG 5 cut(s) 569, 767, 926, 1059, 1545
BfmI CTRYAG 1 cut(s) 498
BfuI GTATCC 3 cut(s) 93, 378, 544
BglI GCCNNNNNGGC 1 cut(s) 266
BmcAI AGTACT 1 cut(s) 1752
Bme1390I CCNGG 7 cut(s) 69, 686, 761, 780, 781, 803, 951
Bme18I GGWCC 5 cut(s) 443, 688, 805, 858, 1577
BmeT110I CYCGRG 1 cut(s) 779
BmgT120I GGNCC 5 cut(s) 443, 688, 805, 858, 1577
BmiI GGNNCC 9 cut(s) 76, 467, 806, 807, 859, 1128, 1434, 1578, 1579
BmrFI CCNGG 7 cut(s) 69, 686, 761, 780, 781, 803, 951
BmsI GCATC 3 cut(s) 28, 1298, 1966
BpiI GAAGAC 3 cut(s) 1061, 1118, 1692
BpmI CTGGAG 1 cut(s) 1913
BpuEI CTTGAG 1 cut(s) 1800
BpuMI CCSGG 4 cut(s) 761, 780, 781, 803
Bsa29I ATCGAT 1 cut(s) 975
BsaAI YACGTR 2 cut(s) 106, 293
BsaBI GATNNNNATC 1 cut(s) 981
BsaJI CCNNGG 8 cut(s) 67, 249, 264, 371, 779, 861, 900, 950
BsaWI WCCGGW 2 cut(s) 752, 985
Bsc4I CCNNNNNNNGG 7 cut(s) 68, 779, 780, 785, 819, 956, 1858
Bse118I RCCGGY 2 cut(s) 327, 361
Bse3DI GCAATG 1 cut(s) 579
Bse8I GATNNNNATC 1 cut(s) 981
BseAI TCCGGA 1 cut(s) 752
BseBI CCWGG 3 cut(s) 69, 686, 951
BseCI ATCGAT 1 cut(s) 975
BseDI CCNNGG 8 cut(s) 67, 249, 264, 371, 779, 861, 900, 950
BseGI GGATG 2 cut(s) 190, 441
BseJI GATNNNNATC 1 cut(s) 981
BseLI CCNNNNNNNGG 7 cut(s) 68, 779, 780, 785, 819, 956, 1858
BseMI GCAATG 1 cut(s) 579
BseMII CTCAG 4 cut(s) 1037, 1608, 1766, 1871
BseRI GAGGAG 5 cut(s) 51, 70, 719, 1379, 1541
BseSI GKGCMC 1 cut(s) 359
BseX3I CGGCCG 1 cut(s) 303
BseXI GCAGC 7 cut(s) 223, 351, 484, 1523, 1543, 1861, 1991
Bsh1236I CGCG 3 cut(s) 1566, 1843, 1845
Bsh1285I CGRYCG 1 cut(s) 306
BshFI GGCC 3 cut(s) 16, 305, 1357
BshNI GGYRCC 2 cut(s) 465, 1432
BshVI ATCGAT 1 cut(s) 975
BsiEI CGRYCG 1 cut(s) 306
BsiHKCI CYCGRG 1 cut(s) 779
BslFI GGGAC 5 cut(s) 755, 818, 967, 1590, 2015
BslI CCNNNNNNNGG 7 cut(s) 68, 779, 780, 785, 819, 956, 1858
BsmAI GTCTC 1 cut(s) 534
BsmFI GGGAC 5 cut(s) 755, 818, 967, 1590, 2015
BsmI GAATGC 2 cut(s) 1785, 1952
BsnI GGCC 3 cut(s) 16, 305, 1357
BsoBI CYCGRG 1 cut(s) 779
Bsp1286I GDGCHC 1 cut(s) 359
Bsp13I TCCGGA 1 cut(s) 752
Bsp1407I TGTACA 1 cut(s) 333
BspACI CCGC 8 cut(s) 51, 72, 86, 97, 284, 302, 342, 1566
BspANI GGCC 3 cut(s) 16, 305, 1357
BspCNI CTCAG 4 cut(s) 1036, 1609, 1767, 1870
BspDI ATCGAT 1 cut(s) 975
BspEI TCCGGA 1 cut(s) 752
BspFNI CGCG 3 cut(s) 1566, 1843, 1845
BspLI GGNNCC 9 cut(s) 76, 467, 806, 807, 859, 1128, 1434, 1578, 1579
BspMAI CTGCAG 1 cut(s) 502
BspPI GGATC 7 cut(s) 69, 82, 85, 541, 791, 1497, 1660
BspT107I GGYRCC 2 cut(s) 465, 1432
BsrDI GCAATG 1 cut(s) 579
BsrFI RCCGGY 2 cut(s) 327, 361
BsrGI TGTACA 1 cut(s) 333
BssAI RCCGGY 2 cut(s) 327, 361
BssECI CCNNGG 8 cut(s) 67, 249, 264, 371, 779, 861, 900, 950
BssT1I CCWWGG 4 cut(s) 249, 264, 861, 900
Bst2UI CCWGG 3 cut(s) 69, 686, 951
Bst4CI ACNGT 4 cut(s) 1315, 1461, 1666, 2011
Bst6I CTCTTC 1 cut(s) 1299
BstAPI GCANNNNNTGC 1 cut(s) 707
BstAUI TGTACA 1 cut(s) 333
BstBAI YACGTR 2 cut(s) 106, 293
BstC8I GCNNGC 3 cut(s) 282, 359, 1993
BstDEI CTNAG 4 cut(s) 1023, 1617, 1775, 1857
BstDSI CCRYGG 1 cut(s) 371
BstENI CCTNNNNNAGG 1 cut(s) 66
BstF5I GGATG 2 cut(s) 190, 441
BstFNI CGCG 3 cut(s) 1566, 1843, 1845
BstHHI GCGC 4 cut(s) 1511, 1571, 1623, 1845
BstMAI GTCTC 1 cut(s) 534
BstMCI CGRYCG 1 cut(s) 306
BstMWI GCNNNNNNNGC 7 cut(s) 94, 128, 266, 578, 707, 1598, 1988
BstNI CCWGG 3 cut(s) 69, 686, 951
BstNSI RCATGY 2 cut(s) 388, 1049
BstSCI CCNGG 7 cut(s) 67, 684, 759, 778, 779, 801, 949
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 1 cut(s) 359
BstUI CGCG 3 cut(s) 1566, 1843, 1845
BstV1I GCAGC 7 cut(s) 223, 351, 484, 1523, 1543, 1861, 1991
BstV2I GAAGAC 3 cut(s) 1061, 1118, 1692
BstX2I RGATCY 3 cut(s) 74, 90, 1652
BstXI CCANNNNNNTGG 1 cut(s) 1547
BstYI RGATCY 3 cut(s) 74, 90, 1652
BstZI CGGCCG 1 cut(s) 303
Bsu15I ATCGAT 1 cut(s) 975
BsuI GTATCC 3 cut(s) 93, 378, 544
BsuRI GGCC 3 cut(s) 16, 305, 1357
BsuTUI ATCGAT 1 cut(s) 975
BtgI CCRYGG 1 cut(s) 371
BtsCI GGATG 2 cut(s) 190, 441
BtsI GCAGTG 1 cut(s) 813
BtsIMutI CAGTG 7 cut(s) 660, 813, 1320, 1365, 1434, 1662, 1918
Cac8I GCNNGC 3 cut(s) 282, 359, 1993
CfoI GCGC 4 cut(s) 1511, 1571, 1623, 1845
Cfr10I RCCGGY 2 cut(s) 327, 361
Cfr13I GGNCC 5 cut(s) 443, 688, 805, 858, 1577
Cfr9I CCCGGG 1 cut(s) 779
ClaI ATCGAT 1 cut(s) 975
Csp6I GTAC 7 cut(s) 196, 334, 466, 484, 823, 1409, 1751
CviAII CATG 7 cut(s) 298, 385, 527, 652, 941, 1046, 1988
CviQI GTAC 7 cut(s) 196, 334, 466, 484, 823, 1409, 1751
DdeI CTNAG 4 cut(s) 1023, 1617, 1775, 1857
DraIII CACNNNGTG 1 cut(s) 738
DrdI GACNNNNNNGTC 2 cut(s) 647, 1584
DseDI GACNNNNNNGTC 2 cut(s) 647, 1584
EaeI YGGCCR 2 cut(s) 303, 1355
EagI CGGCCG 1 cut(s) 303
Eam1104I CTCTTC 1 cut(s) 1299
EarI CTCTTC 1 cut(s) 1299
EciI GGCGGA 2 cut(s) 87, 112
EclXI CGGCCG 1 cut(s) 303
Eco130I CCWWGG 4 cut(s) 249, 264, 861, 900
Eco147I AGGCCT 1 cut(s) 16
Eco47I GGWCC 5 cut(s) 443, 688, 805, 858, 1577
Eco52I CGGCCG 1 cut(s) 303
Eco57I CTGAAG 2 cut(s) 852, 1280
Eco72I CACGTG 2 cut(s) 106, 293
Eco88I CYCGRG 1 cut(s) 779
EcoNI CCTNNNNNAGG 1 cut(s) 66
EcoO109I RGGNCCY 2 cut(s) 805, 1577
EcoRI GAATTC 1 cut(s) 1302
EcoRII CCWGG 3 cut(s) 67, 684, 949
EcoT14I CCWWGG 4 cut(s) 249, 264, 861, 900
EcoT22I ATGCAT 1 cut(s) 1093
ErhI CCWWGG 4 cut(s) 249, 264, 861, 900
FaeI CATG 7 cut(s) 301, 388, 530, 655, 944, 1049, 1991
FalI AAGNNNNNCTT 2 cut(s) 1382, 1414
FaqI GGGAC 5 cut(s) 755, 818, 967, 1590, 2015
FatI CATG 7 cut(s) 297, 384, 526, 651, 940, 1045, 1987
FbaI TGATCA 5 cut(s) 583, 1207, 1324, 1687, 1789
FblI GTMKAC 1 cut(s) 1632
FokI GGATG 2 cut(s) 197, 448
FspBI CTAG 5 cut(s) 569, 767, 926, 1059, 1545
GlaI GCGC 4 cut(s) 1510, 1570, 1622, 1844
GsuI CTGGAG 1 cut(s) 1913
HaeIII GGCC 3 cut(s) 16, 305, 1357
HhaI GCGC 4 cut(s) 1511, 1571, 1623, 1845
Hin1II CATG 7 cut(s) 301, 388, 530, 655, 944, 1049, 1991
Hin6I GCGC 4 cut(s) 1509, 1569, 1621, 1843
HinP1I GCGC 4 cut(s) 1509, 1569, 1621, 1843
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HindIII AAGCTT 2 cut(s) 1807, 1993
HinfI GANTC 6 cut(s) 606, 677, 789, 1250, 1517, 1984
HpaI GTTAAC 1 cut(s) 868
HphI GGTGA 9 cut(s) 151, 234, 298, 362, 551, 724, 1772, 1962, 1990
Hpy166II GTNNAC 6 cut(s) 196, 825, 868, 1633, 1823, 1849
Hpy188I TCNGA 8 cut(s) 316, 788, 1026, 1212, 1255, 1494, 1618, 1776
Hpy188III TCNNGA 8 cut(s) 182, 537, 610, 753, 1064, 1130, 1276, 1930
Hpy8I GTNNAC 6 cut(s) 196, 825, 868, 1633, 1823, 1849
HpyAV CCTTC 8 cut(s) 53, 103, 572, 827, 1210, 1218, 1273, 1489
HpyCH4III ACNGT 4 cut(s) 1315, 1461, 1666, 2011
HpyCH4IV ACGT 4 cut(s) 105, 292, 1443, 1960
HpyF10VI GCNNNNNNNGC 7 cut(s) 94, 128, 266, 578, 707, 1598, 1988
HpyF3I CTNAG 4 cut(s) 1023, 1617, 1775, 1857
HpySE526I ACGT 4 cut(s) 105, 292, 1443, 1960
Hsp92II CATG 7 cut(s) 301, 388, 530, 655, 944, 1049, 1991
HspAI GCGC 4 cut(s) 1509, 1569, 1621, 1843
KflI GGGWCCC 2 cut(s) 805, 1577
Kpn2I TCCGGA 1 cut(s) 752
KpnI GGTACC 1 cut(s) 469
Ksp22I TGATCA 5 cut(s) 583, 1207, 1324, 1687, 1789
KspAI GTTAAC 1 cut(s) 868
LmnI GCTCC 2 cut(s) 1553, 1871
Lsp1109I GCAGC 7 cut(s) 223, 351, 484, 1523, 1543, 1861, 1991
LweI GCATC 3 cut(s) 28, 1298, 1966
MaeI CTAG 5 cut(s) 569, 767, 926, 1059, 1545
MaeII ACGT 4 cut(s) 105, 292, 1443, 1960
MaeIII GTNAC 4 cut(s) 286, 1001, 1915, 2005
MboII GAAGA 6 cut(s) 439, 1066, 1123, 1286, 1405, 1692
MfeI CAATTG 1 cut(s) 852
MflI RGATCY 3 cut(s) 74, 90, 1652
MhlI GDGCHC 1 cut(s) 359
MlsI TGGCCA 1 cut(s) 1357
MluNI TGGCCA 1 cut(s) 1357
MlyI GAGTC 5 cut(s) 615, 686, 798, 1259, 1993
MmeI TCCRAC 6 cut(s) 294, 993, 1220, 1443, 1467, 1545
Mox20I TGGCCA 1 cut(s) 1357
Mph1103I ATGCAT 1 cut(s) 1093
MroI TCCGGA 1 cut(s) 752
MroXI GAANNNNTTC 1 cut(s) 1397
MscI TGGCCA 1 cut(s) 1357
MseI TTAA 4 cut(s) 867, 912, 1722, 2048
MslI CAYNNNNRTG 1 cut(s) 362
Msp20I TGGCCA 1 cut(s) 1357
MspA1I CMGCKG 2 cut(s) 342, 1514
MspR9I CCNGG 7 cut(s) 69, 686, 761, 780, 781, 803, 951
MunI CAATTG 1 cut(s) 852
Mva1269I GAATGC 2 cut(s) 1785, 1952
MvaI CCWGG 3 cut(s) 69, 686, 951
MvnI CGCG 3 cut(s) 1566, 1843, 1845
MwoI GCNNNNNNNGC 7 cut(s) 94, 128, 266, 578, 707, 1598, 1988
NciI CCSGG 4 cut(s) 761, 780, 781, 803
NlaIII CATG 7 cut(s) 301, 388, 530, 655, 944, 1049, 1991
NlaIV GGNNCC 9 cut(s) 76, 467, 806, 807, 859, 1128, 1434, 1578, 1579
NmeAIII GCCGAG 2 cut(s) 599, 1501
NmuCI GTSAC 2 cut(s) 286, 1001
NsiI ATGCAT 1 cut(s) 1093
NspI RCATGY 2 cut(s) 388, 1049
OliI CACNNNNGTG 1 cut(s) 362
PceI AGGCCT 1 cut(s) 16
PcsI WCGNNNNNNNCGW 1 cut(s) 320
PctI GAATGC 2 cut(s) 1785, 1952
PdmI GAANNNNTTC 1 cut(s) 1397
PfeI GAWTC 1 cut(s) 1517
PflFI GACNNNGTC 1 cut(s) 1469
PflMI CCANNNNNTGG 1 cut(s) 819
PfoI TCCNGGA 1 cut(s) 801
PleI GAGTC 5 cut(s) 614, 685, 797, 1258, 1992
PmaCI CACGTG 2 cut(s) 106, 293
PmlI CACGTG 2 cut(s) 106, 293
PpsI GAGTC 5 cut(s) 614, 685, 797, 1258, 1992
Ppu21I YACGTR 2 cut(s) 106, 293
PpuMI RGGWCCY 2 cut(s) 805, 1577
PsiI TTATAA 1 cut(s) 1104
Psp5II RGGWCCY 2 cut(s) 805, 1577
Psp6I CCWGG 3 cut(s) 67, 684, 949
PspCI CACGTG 2 cut(s) 106, 293
PspGI CCWGG 3 cut(s) 67, 684, 949
PspN4I GGNNCC 9 cut(s) 76, 467, 806, 807, 859, 1128, 1434, 1578, 1579
PspPI GGNCC 5 cut(s) 443, 688, 805, 858, 1577
PspPPI RGGWCCY 2 cut(s) 805, 1577
PstI CTGCAG 1 cut(s) 502
PsuI RGATCY 3 cut(s) 74, 90, 1652
PsyI GACNNNGTC 1 cut(s) 1469
PvuII CAGCTG 1 cut(s) 1514
RsaI GTAC 7 cut(s) 197, 335, 467, 485, 824, 1410, 1752
RsaNI GTAC 7 cut(s) 196, 334, 466, 484, 823, 1409, 1751
RseI CAYNNNNRTG 1 cut(s) 362
SaqAI TTAA 4 cut(s) 867, 912, 1722, 2048
Sau96I GGNCC 5 cut(s) 443, 688, 805, 858, 1577
ScaI AGTACT 1 cut(s) 1752
SchI GAGTC 5 cut(s) 615, 686, 798, 1259, 1993
ScrFI CCNGG 7 cut(s) 69, 686, 761, 780, 781, 803, 951
SduI GDGCHC 1 cut(s) 359
SfaNI GCATC 3 cut(s) 28, 1298, 1966
SfcI CTRYAG 1 cut(s) 498
SgrAI CRCCGGYG 1 cut(s) 361
SinI GGWCC 5 cut(s) 443, 688, 805, 858, 1577
SmaI CCCGGG 1 cut(s) 781
SmiMI CAYNNNNRTG 1 cut(s) 362
SmlI CTYRAG 1 cut(s) 1815
SmoI CTYRAG 1 cut(s) 1815
SpeI ACTAGT 2 cut(s) 1058, 1544
SseBI AGGCCT 1 cut(s) 16
SsiI CCGC 8 cut(s) 51, 72, 86, 97, 284, 302, 342, 1566
SspMI CTAG 5 cut(s) 569, 767, 926, 1059, 1545
StuI AGGCCT 1 cut(s) 16
StyD4I CCNGG 7 cut(s) 67, 684, 759, 778, 779, 801, 949
StyI CCWWGG 4 cut(s) 249, 264, 861, 900
TaaI ACNGT 4 cut(s) 1315, 1461, 1666, 2011
TaiI ACGT 4 cut(s) 108, 295, 1446, 1963
TaqI TCGA 4 cut(s) 323, 975, 992, 1401
TatI WGTACW 3 cut(s) 333, 483, 1750
TauI GCSGC 3 cut(s) 305, 345, 1569
TfiI GAWTC 1 cut(s) 1517
Tru1I TTAA 4 cut(s) 867, 912, 1722, 2048
Tru9I TTAA 4 cut(s) 867, 912, 1722, 2048
TscAI CASTG 7 cut(s) 667, 820, 1320, 1365, 1434, 1669, 1918
TseFI GTSAC 2 cut(s) 286, 1001
TseI GCWGC 7 cut(s) 236, 339, 497, 1511, 1556, 1874, 1979
Tsp45I GTSAC 2 cut(s) 286, 1001
TspDTI ATGAA 6 cut(s) 452, 929, 1067, 1945, 1958, 2014
TspGWI ACGGA 1 cut(s) 360
TspMI CCCGGG 1 cut(s) 779
TspRI CASTG 7 cut(s) 667, 820, 1320, 1365, 1434, 1669, 1918
Tth111I GACNNNGTC 1 cut(s) 1469
Van91I CCANNNNNTGG 1 cut(s) 819
VpaK11BI GGWCC 5 cut(s) 443, 688, 805, 858, 1577
XagI CCTNNNNNAGG 1 cut(s) 66
XapI RAATTY 2 cut(s) 1302, 2021
XceI RCATGY 2 cut(s) 388, 1049
XcmI CCANNNNNNNNNTGG 1 cut(s) 1547
XmaI CCCGGG 1 cut(s) 779
XmiI GTMKAC 1 cut(s) 1632
XmnI GAANNNNTTC 1 cut(s) 1397
XspI CTAG 5 cut(s) 569, 767, 926, 1059, 1545
ZrmI AGTACT 1 cut(s) 1752
Zsp2I ATGCAT 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.