AT1G67720

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014515
Physical Location & Seq
Forward (+)
25386131 .. 25391258
5128 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G67720.1

Sequence Viewer

Length: 2790 bp
ATGGGTTTATGCTTAGCTCAATTGGCTGTAACATGTTTGTTCCTAGTACCTTTTGTTCTGTCTCAAGTTACAGAGTTTGTAAGTATAGATTGTGGTTGCTCAAGTAACTACACAGACCCAAGAACTGGACTAGGATGGGTTTCAGATTCAGAGATCATCAAACAGGGCAAGCCAGTAACTTTGGCCAATACCAATTGGAACTCGATGCAATACCGTAGGAGAAGAGATTTCCCAACTGACAATAAGAAGTATTGTTACAGACTCAGTACCAAAGAGAGAAGGCGATACATTGTCAGAACTACATTTCTTTATGGTGGTTTGGGTAGTGAGGAAGCCTACCCAAAGTTTCAACTTTACTTGGATGCAACGAAATGGGCTACTGTGACGATTCAGGAGGTCTCTAGGGTTTATGTTGAGGAGTTGATCGTAAGGGCAACTTCAAGTTATGTGGATGTTTGTGTATGCTGTGCTATCACCGGTTCTCCTTTCATGTCCACTCTTGAGCTTCGCCCGTTGAACCTTTCGATGTATGCCACTGACTACGAGGATAATTTCTTCTTGAAGGTTGCTGCCAGAGTGAATTTTGGTGCTCCGAACATGGATGCCTTGAGGTACCCAGATGATCCATATGACAGAATCTGGGAGTCAGATATTAACAAACGGCCAAACTATCTTGTTGGTGTGGCTCCTGGAACGACAAGAATCAATACGTCAAAGACTATAAATACGTTGACTAGAGAGTATCCGCCTATGAAAGTCATGCAAACAGCAGTAGTTGGCACACAAGGACTGATCAGCTATAGATTGAACCTGGAAGACTTCCCTGCCAATGCTCGTGCGTATGCTTATTTTGCTGAAATTGAAGAACTTGGTGCTAACGAGACCCGGAAATTTAAGTTGGTGCAGCCATACTTTCCTGACTATAGTAATGCAGTGGTGAACATTGCCGAGAATGCCAATGGGAGCTATACTCTCTATGAACCTAGCTATATGAATGTGACTTTGGATTTTGTTTTGACGTTCTCATTTGGGAAGACTAAGGATTCTACGCAAGGGCCACTCCTAAATGCAATTGAAATTAGCAAGTATCTACCAATATCCGTGAAAACTGATAGGAGTGACGTGTCTGTTCTTGATGCAATTCGTTCGATGTCCCCTGATAGCGATTGGGCCAGTGAAGGAGGAGACCCTTGTATCCCAGTTCTTTGGTCGTGGGTAAACTGTAGCTCAACTTCACCACCAAGAGTCACGAAAATTGCTCTATCAAGGAAAAATCTGAGGGGTGAGATTCCGCCTGGGATCAATTATATGGAGGCATTGACAGAGTTGTGGCTTGACGATAATGAATTGACCGGAACTCTTCCAGACATGAGCAAACTTGTCAACCTGAAAATCATGCATCTAGAAAACAACCAACTTAGTGGTTCACTCCCACCATACCTTGCTCATCTGCCTAACCTACAAGAACTGTCTATAGAAAATAACTCCTTTAAAGGAAAAATTCCTTCAGCGCTATTAAAGGGGAAAGTTTTGTTCAAATATAATAATAATCCTGAGCTTCAGAACGAGGCACAGCGAAAGCACTTTTGGCAGATACTGGGGATATCAATAGCCGCTGTCGCAATTCTGTTGCTACTAGTTGGAGGAAGTCTTGTTTTACTTTGTGCCCTTCGTAAGACCAAAAGAGCTGATAAAGGTGATTCCACAGAGACTAAGAAAAAAGGTTTAGTAGCTTACTCAGCAGTGCGGGGCGGACACTTATTAGATGAAGGTGTAGCATATTTCATATCACTTCCTGTGCTCGAAGAGGCAACCGATAATTTTTCCAAGAAAGTTGGAAGAGGAAGTTTTGGGTCTGTCTACTATGGTAGGATGAAAGATGGGAAAGAAGTTGCAGTTAAGATAACTGCAGATCCTTCTAGCCACTTGAACAGACAATTTGTGACTGAGGTTGCTCTATTATCGAGAATTCACCACAGGAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGCAGATCGGCGTATTTTGGTTTACGAATATATGCATAATGGAAGCTTGGGAGATCACTTGCATGGTTCAAGCGACTACAAGCCACTAGACTGGCTAACTCGGCTACAAATTGCACAAGATGCTGCCAAAGGTCTTGAATACTTGCATACTGGCTGCAATCCTAGTATTATTCATAGGGATGTGAAATCAAGTAATATTCTCCTGGACATTAACATGAGAGCCAAAGTATCTGACTTTGGACTCTCGAGACAGACAGAGGAAGACTTAACTCATGTATCCAGTGTCGCAAAAGGAACTGTTGGATACCTTGATCCAGAGTATTATGCTAGTCAGCAGCTGACTGAGAAGAGCGATGTCTACAGTTTTGGCGTTGTTCTTTTTGAATTACTCTCTGGAAAGAAGCCAGTCTCAGCAGAAGATTTTGGTCCTGAACTGAATATAGTTCACTGGGCAAGATCGCTGATCCGTAAAGGAGACGTGTGCGGGATCATAGATCCATGTATAGCAAGCAACGTGAAGATCGAGTCAGTCTGGAGAGTTGCAGAGGTCGCAAACCAATGTGTTGAGCAGCGTGGACATAACAGGCCAAGGATGCAGGAAGTAATAGTGGCAATACAAGACGCGATCAGGATCGAGAGAGGAAACGAAAATGGACTGAAGTCATCGAGTTCAAGCAGCTCAAAGGCACAATCATCTCGTAAAACCTTGCTTACTAGCTTCCTCGAGCTAGAGAGCCCTGACATCTCAAGAAACAGCCTAGCTCCAGCTGCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_4 LRR_8 Malectin_like Pkinase_Tyr

Protein Analysis

929

Amino Acids

103.75

Weight (kDa)

7.19

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 29 - 362 5.6e-87 Malectin-like domain
LRR_8 PF13855 440 - 496 5.6e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 608 - 873 4.5e-50 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 609 - 812 1.4e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014515)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67720
fragaria_vesca FvH4_4g24900 FvH4_4g24900 FvH4_4g24900
malus_domestica MD13G1108000.v1.1 MD16G1108100.v1.1
prunus_persica Prupe.1G238400_v2.0.a1 Prupe.1G238400_v2.0.a1
pyrus_communis pycom16g09210
rosa_chinensis RchiOBHm_Chr4g0431961
rosa_laevigata RLG00000006871
rosa_multiflora Rmu_sc0004965.1_g000014
rosa_roxburghii Rroxscaffold_5G00373400
rosa_rugosa Rorug04G0253600 Rorug04G0253700
rosa_samantha Rh4BG317900
rosa_wichuraiana Rw4G027040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 612
AccB1I GGYRCC 1 cut(s) 612
AccB7I CCANNNNNTGG 1 cut(s) 125
AccI GTMKAC 2 cut(s) 1860, 2370
AccII CGCG 1 cut(s) 2636
AciI CCGC 6 cut(s) 746, 1292, 1614, 1747, 1752, 2496
AclWI GGATC 8 cut(s) 617, 1307, 1907, 2318, 2470, 2501, 2507, 2651
AcoI YGGCCR 2 cut(s) 183, 662
AcsI RAATTY 4 cut(s) 580, 890, 1500, 1968
AcuI CTGAAG 3 cut(s) 1491, 1544, 2690
AfaI GTAC 3 cut(s) 48, 268, 614
AfeI AGCGCT 1 cut(s) 1512
AfiI CCNNNNNNNGG 2 cut(s) 125, 1997
AflIII ACRYGT 3 cut(s) 32, 1122, 2490
AgeI ACCGGT 1 cut(s) 476
AhlI ACTAGT 1 cut(s) 1636
AjiI CACGTC 2 cut(s) 1123, 2491
AjnI CCWGG 4 cut(s) 688, 810, 1294, 2214
AjuI GAANNNNNNNTTGG 6 cut(s) 881, 913, 986, 1018, 1570, 1602
Alw21I GWGCWC 2 cut(s) 592, 1803
Alw26I GTCTC 8 cut(s) 66, 403, 875, 1179, 1703, 2254, 2425, 2481
AlwI GGATC 8 cut(s) 617, 1307, 1907, 2318, 2470, 2501, 2507, 2651
AlwNI CAGNNNCTG 3 cut(s) 639, 1597, 2350
Ama87I CYCGRG 2 cut(s) 2257, 2735
Aor51HI AGCGCT 1 cut(s) 1512
AoxI GGCC 5 cut(s) 183, 662, 1055, 1170, 2597
ApeKI GCWGC 8 cut(s) 569, 904, 2135, 2166, 2347, 2581, 2688, 2780
ApoI RAATTY 4 cut(s) 580, 890, 1500, 1968
AsiGI ACCGGT 1 cut(s) 476
Asp718I GGTACC 1 cut(s) 612
AspLEI GCGC 1 cut(s) 1513
AspS9I GGNCC 3 cut(s) 1055, 1170, 2438
AsuC2I CCSGG 1 cut(s) 886
AsuHPI GGTGA 6 cut(s) 466, 949, 1227, 1295, 1709, 1964
AvaI CYCGRG 2 cut(s) 2257, 2735
AvaII GGWCC 1 cut(s) 2438
BaeGI GKGCMC 1 cut(s) 1669
BaeI ACNNNNGTAYC 4 cut(s) 1177, 1210, 2271, 2304
BalI TGGCCA 1 cut(s) 185
BanI GGYRCC 1 cut(s) 612
BanII GRGCYC 1 cut(s) 2750
BarI GAAGNNNNNNTAC 4 cut(s) 239, 271, 1216, 1248
BauI CACGAG 1 cut(s) 834
BbsI GAAGAC 3 cut(s) 822, 1040, 2280
Bbv12I GWGCWC 2 cut(s) 592, 1803
BbvI GCAGC 8 cut(s) 556, 916, 2122, 2153, 2359, 2593, 2700, 2767
BccI CCATC 2 cut(s) 129, 1874
BceAI ACGGC 1 cut(s) 677
BcgI CGANNNNNNTGC 2 cut(s) 1128, 1162
BciT130I CCWGG 4 cut(s) 690, 812, 1296, 2216
BciVI GTATCC 4 cut(s) 753, 1205, 2299, 2309
BclI TGATCA 1 cut(s) 792
BcnI CCSGG 1 cut(s) 886
BcoDI GTCTC 8 cut(s) 66, 403, 875, 1179, 1703, 2254, 2425, 2481
BcuI ACTAGT 1 cut(s) 1636
BfmI CTRYAG 6 cut(s) 799, 922, 1222, 1473, 1908, 2371
BfoI RGCGCY 1 cut(s) 1514
BfuI GTATCC 4 cut(s) 753, 1205, 2299, 2309
BisI GCNGC 9 cut(s) 570, 905, 1614, 2136, 2167, 2348, 2582, 2689, 2781
BlpI GCTNAGC 1 cut(s) 13
BlsI GCNGC 9 cut(s) 571, 906, 1615, 2137, 2168, 2349, 2583, 2690, 2782
Bme1390I CCNGG 5 cut(s) 690, 812, 886, 1296, 2216
Bme18I GGWCC 1 cut(s) 2438
BmeT110I CYCGRG 2 cut(s) 2257, 2735
BmgBI CACGTC 2 cut(s) 1123, 2491
BmgT120I GGNCC 3 cut(s) 1055, 1170, 2438
BmiI GGNNCC 3 cut(s) 614, 687, 1989
BmrFI CCNGG 5 cut(s) 690, 812, 886, 1296, 2216
BmrI ACTGGG 3 cut(s) 1193, 1607, 2470
BmsI GCATC 7 cut(s) 195, 352, 592, 1126, 1408, 2122, 2595
BmuI ACTGGG 3 cut(s) 1193, 1607, 2470
BoxI GACNNNNGTC 1 cut(s) 2671
BpiI GAAGAC 3 cut(s) 822, 1040, 2280
BplI GAGNNNNNCTC 2 cut(s) 955, 987
BpmI CTGGAG 2 cut(s) 2566, 2760
Bpu10I CCTNAGC 1 cut(s) 1554
Bpu1102I GCTNAGC 1 cut(s) 13
BpuEI CTTGAG 5 cut(s) 48, 85, 521, 628, 2743
BpuMI CCSGG 1 cut(s) 886
BsaBI GATNNNNATC 1 cut(s) 2642
BsaI GGTCTC 3 cut(s) 403, 875, 1179
BsaJI CCNNGG 2 cut(s) 1295, 2600
BsaWI WCCGGW 2 cut(s) 476, 1352
BsaXI ACNNNNNCTCC 2 cut(s) 466, 496
Bsc4I CCNNNNNNNGG 2 cut(s) 125, 1997
Bse118I RCCGGY 1 cut(s) 476
Bse3DI GCAATG 1 cut(s) 942
Bse8I GATNNNNATC 1 cut(s) 2642
BseBI CCWGG 4 cut(s) 690, 812, 1296, 2216
BseDI CCNNGG 2 cut(s) 1295, 2600
BseGI GGATG 7 cut(s) 140, 367, 457, 607, 1878, 2197, 2610
BseJI GATNNNNATC 1 cut(s) 2642
BseLI CCNNNNNNNGG 2 cut(s) 125, 1997
BseMI GCAATG 1 cut(s) 942
BseMII CTCAG 7 cut(s) 277, 1268, 1545, 1752, 1938, 2346, 2436
BseRI GAGGAG 2 cut(s) 431, 1197
BseSI GKGCMC 1 cut(s) 1669
BseXI GCAGC 8 cut(s) 556, 916, 2122, 2153, 2359, 2593, 2700, 2767
BsgI GTGCAG 1 cut(s) 923
Bsh1236I CGCG 1 cut(s) 2636
BshFI GGCC 5 cut(s) 185, 664, 1057, 1172, 2599
BshNI GGYRCC 1 cut(s) 612
BshTI ACCGGT 1 cut(s) 476
BsiHKAI GWGCWC 2 cut(s) 592, 1803
BsiHKCI CYCGRG 2 cut(s) 2257, 2735
BsiSI CCGG 3 cut(s) 477, 886, 1353
BslFI GGGAC 1 cut(s) 1138
BslI CCNNNNNNNGG 2 cut(s) 125, 1997
BsmAI GTCTC 8 cut(s) 66, 403, 875, 1179, 1703, 2254, 2425, 2481
BsmBI CGTCTC 1 cut(s) 2481
BsmFI GGGAC 1 cut(s) 1138
BsmI GAATGC 1 cut(s) 958
BsnI GGCC 5 cut(s) 185, 664, 1057, 1172, 2599
Bso31I GGTCTC 3 cut(s) 403, 875, 1179
BsoBI CYCGRG 2 cut(s) 2257, 2735
Bsp1286I GDGCHC 4 cut(s) 592, 1669, 1803, 2750
Bsp1720I GCTNAGC 1 cut(s) 13
BspACI CCGC 6 cut(s) 746, 1292, 1614, 1747, 1752, 2496
BspANI GGCC 5 cut(s) 185, 664, 1057, 1172, 2599
BspCNI CTCAG 7 cut(s) 276, 1269, 1546, 1751, 1939, 2347, 2435
BspFNI CGCG 1 cut(s) 2636
BspLI GGNNCC 3 cut(s) 614, 687, 1989
BspMAI CTGCAG 1 cut(s) 1912
BspPI GGATC 8 cut(s) 617, 1307, 1907, 2318, 2470, 2501, 2507, 2651
BspQI GCTCTTC 1 cut(s) 2354
BspT107I GGYRCC 1 cut(s) 612
BspTNI GGTCTC 3 cut(s) 403, 875, 1179
BsrDI GCAATG 1 cut(s) 942
BsrFI RCCGGY 1 cut(s) 476
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 2 cut(s) 1295, 2600
BssSI CACGAG 1 cut(s) 834
BssT1I CCWWGG 1 cut(s) 2600
Bst2BI CACGAG 1 cut(s) 834
Bst2UI CCWGG 4 cut(s) 690, 812, 1296, 2216
Bst4CI ACNGT 6 cut(s) 215, 382, 1223, 1470, 2311, 2375
Bst6I CTCTTC 5 cut(s) 217, 1365, 1800, 1834, 2354
BstAPI GCANNNNNTGC 1 cut(s) 2132
BstC8I GCNNGC 2 cut(s) 170, 2521
BstF5I GGATG 7 cut(s) 140, 367, 457, 607, 1878, 2197, 2610
BstFNI CGCG 1 cut(s) 2636
BstH2I RGCGCY 1 cut(s) 1514
BstHHI GCGC 1 cut(s) 1513
BstMAI GTCTC 8 cut(s) 66, 403, 875, 1179, 1703, 2254, 2425, 2481
BstNI CCWGG 4 cut(s) 690, 812, 1296, 2216
BstNSI RCATGY 1 cut(s) 36
BstPAI GACNNNNGTC 1 cut(s) 2671
BstSCI CCNGG 5 cut(s) 688, 810, 884, 1294, 2214
BstSFI CTRYAG 6 cut(s) 799, 922, 1222, 1473, 1908, 2371
BstSLI GKGCMC 1 cut(s) 1669
BstUI CGCG 1 cut(s) 2636
BstV1I GCAGC 8 cut(s) 556, 916, 2122, 2153, 2359, 2593, 2700, 2767
BstV2I GAAGAC 3 cut(s) 822, 1040, 2280
BstX2I RGATCY 2 cut(s) 1912, 2506
BstXI CCANNNNNNTGG 3 cut(s) 1206, 1421, 2103
BstYI RGATCY 2 cut(s) 1912, 2506
BsuI GTATCC 4 cut(s) 753, 1205, 2299, 2309
BsuRI GGCC 5 cut(s) 185, 664, 1057, 1172, 2599
BtgZI GCGATG 1 cut(s) 2379
BtrI CACGTC 2 cut(s) 1123, 2491
BtsCI GGATG 7 cut(s) 140, 367, 457, 607, 1878, 2197, 2610
BtsI GCAGTG 2 cut(s) 939, 1749
BtsIMutI CAGTG 6 cut(s) 534, 939, 1180, 1749, 2299, 2458
Cac8I GCNNGC 2 cut(s) 170, 2521
CaiI CAGNNNCTG 3 cut(s) 639, 1597, 2350
CfoI GCGC 1 cut(s) 1513
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 3 cut(s) 1055, 1170, 2438
CseI GACGC 1 cut(s) 2642
Csp6I GTAC 3 cut(s) 47, 267, 613
CspAI ACCGGT 1 cut(s) 476
CspCI CAANNNNNGTGG 2 cut(s) 429, 464
CviQI GTAC 3 cut(s) 47, 267, 613
DraI TTTAAA 1 cut(s) 1492
EaeI YGGCCR 2 cut(s) 183, 662
Eam1104I CTCTTC 5 cut(s) 217, 1365, 1800, 1834, 2354
EarI CTCTTC 5 cut(s) 217, 1365, 1800, 1834, 2354
EciI GGCGGA 3 cut(s) 735, 1281, 1767
Eco130I CCWWGG 1 cut(s) 2600
Eco24I GRGCYC 1 cut(s) 2750
Eco31I GGTCTC 3 cut(s) 403, 875, 1179
Eco32I GATATC 1 cut(s) 1605
Eco47I GGWCC 1 cut(s) 2438
Eco47III AGCGCT 1 cut(s) 1512
Eco57I CTGAAG 3 cut(s) 1491, 1544, 2690
Eco88I CYCGRG 2 cut(s) 2257, 2735
EcoRI GAATTC 1 cut(s) 1968
EcoRII CCWGG 4 cut(s) 688, 810, 1294, 2214
EcoRV GATATC 1 cut(s) 1605
EcoT14I CCWWGG 1 cut(s) 2600
EcoT22I ATGCAT 2 cut(s) 1401, 2049
EcoT38I GRGCYC 1 cut(s) 2750
ErhI CCWWGG 1 cut(s) 2600
Esp3I CGTCTC 1 cut(s) 2481
FalI AAGNNNNNCTT 2 cut(s) 421, 453
FaqI GGGAC 1 cut(s) 1138
FauI CCCGC 2 cut(s) 1740, 2489
FauNDI CATATG 1 cut(s) 628
FbaI TGATCA 1 cut(s) 792
FblI GTMKAC 2 cut(s) 1860, 2370
Fnu4HI GCNGC 9 cut(s) 570, 905, 1614, 2136, 2167, 2348, 2582, 2689, 2781
FokI GGATG 7 cut(s) 147, 374, 464, 614, 1885, 2204, 2617
FriOI GRGCYC 1 cut(s) 2750
Fsp4HI GCNGC 9 cut(s) 570, 905, 1614, 2136, 2167, 2348, 2582, 2689, 2781
GlaI GCGC 1 cut(s) 1512
GluI GCNGC 9 cut(s) 570, 905, 1614, 2136, 2167, 2348, 2582, 2689, 2781
GsuI CTGGAG 2 cut(s) 2566, 2760
HaeII RGCGCY 1 cut(s) 1514
HaeIII GGCC 5 cut(s) 185, 664, 1057, 1172, 2599
HapII CCGG 3 cut(s) 477, 886, 1353
HgaI GACGC 1 cut(s) 2642
HhaI GCGC 1 cut(s) 1513
Hin6I GCGC 1 cut(s) 1511
HinP1I GCGC 1 cut(s) 1511
HincII GTYRAC 2 cut(s) 732, 1384
HindII GTYRAC 2 cut(s) 732, 1384
HindIII AAGCTT 1 cut(s) 2056
HpaII CCGG 3 cut(s) 477, 886, 1353
HphI GGTGA 6 cut(s) 466, 949, 1227, 1295, 1709, 1964
Hpy188I TCNGA 8 cut(s) 145, 151, 296, 594, 649, 1278, 1563, 2245
HpyAV CCTTC 7 cut(s) 273, 556, 1172, 1515, 1679, 1763, 1926
HpyCH4III ACNGT 6 cut(s) 215, 382, 1223, 1470, 2311, 2375
HpyCH4IV ACGT 6 cut(s) 710, 728, 1019, 1122, 2490, 2526
HpySE526I ACGT 6 cut(s) 710, 728, 1019, 1122, 2490, 2526
HspAI GCGC 1 cut(s) 1511
KpnI GGTACC 1 cut(s) 616
Ksp22I TGATCA 1 cut(s) 792
LguI GCTCTTC 1 cut(s) 2354
LmnI GCTCC 4 cut(s) 595, 691, 963, 2779
Lsp1109I GCAGC 8 cut(s) 556, 916, 2122, 2153, 2359, 2593, 2700, 2767
LweI GCATC 7 cut(s) 195, 352, 592, 1126, 1408, 2122, 2595
MaeII ACGT 6 cut(s) 710, 728, 1019, 1122, 2490, 2526
MfeI CAATTG 3 cut(s) 20, 193, 1071
MflI RGATCY 2 cut(s) 1912, 2506
MhlI GDGCHC 4 cut(s) 592, 1669, 1803, 2750
MlsI TGGCCA 1 cut(s) 185
MluNI TGGCCA 1 cut(s) 185
MlyI GAGTC 5 cut(s) 255, 653, 1254, 2247, 2546
MmeI TCCRAC 3 cut(s) 1621, 1816, 2293
Mox20I TGGCCA 1 cut(s) 185
Mph1103I ATGCAT 2 cut(s) 1401, 2049
MscI TGGCCA 1 cut(s) 185
MseI TTAA 7 cut(s) 654, 894, 1491, 1517, 1899, 2223, 2279
MslI CAYNNNNRTG 3 cut(s) 2073, 2190, 2225
Msp20I TGGCCA 1 cut(s) 185
MspA1I CMGCKG 3 cut(s) 1616, 2350, 2780
MspI CCGG 3 cut(s) 477, 886, 1353
MspR9I CCNGG 5 cut(s) 690, 812, 886, 1296, 2216
MunI CAATTG 3 cut(s) 20, 193, 1071
Mva1269I GAATGC 1 cut(s) 958
MvaI CCWGG 4 cut(s) 690, 812, 1296, 2216
MvnI CGCG 1 cut(s) 2636
NciI CCSGG 1 cut(s) 886
NdeI CATATG 1 cut(s) 628
NlaIV GGNNCC 3 cut(s) 614, 687, 1989
NmeAIII GCCGAG 2 cut(s) 973, 2092
NmuCI GTSAC 5 cut(s) 382, 997, 1118, 1246, 1942
NsiI ATGCAT 2 cut(s) 1401, 2049
NspI RCATGY 1 cut(s) 36
PaeR7I CTCGAG 2 cut(s) 2257, 2735
PciI ACATGT 1 cut(s) 32
PciSI GCTCTTC 1 cut(s) 2354
PcsI WCGNNNNNNNCGW 1 cut(s) 2532
PctI GAATGC 1 cut(s) 958
PfeI GAWTC 7 cut(s) 146, 388, 636, 702, 1043, 1288, 1700
PflMI CCANNNNNTGG 1 cut(s) 125
PfoI TCCNGGA 2 cut(s) 688, 2214
PinAI ACCGGT 1 cut(s) 476
PkrI GCNGC 9 cut(s) 571, 906, 1615, 2137, 2168, 2349, 2583, 2690, 2782
PleI GAGTC 5 cut(s) 255, 652, 1253, 2247, 2545
PpsI GAGTC 5 cut(s) 255, 652, 1253, 2247, 2545
PscI ACATGT 1 cut(s) 32
PshAI GACNNNNGTC 1 cut(s) 2671
Psp6I CCWGG 4 cut(s) 688, 810, 1294, 2214
PspGI CCWGG 4 cut(s) 688, 810, 1294, 2214
PspN4I GGNNCC 3 cut(s) 614, 687, 1989
PspPI GGNCC 3 cut(s) 1055, 1170, 2438
PspXI VCTCGAGB 1 cut(s) 2735
PsrI GAACNNNNNNTAC 2 cut(s) 39, 71
PstI CTGCAG 1 cut(s) 1912
PstNI CAGNNNCTG 3 cut(s) 639, 1597, 2350
PsuI RGATCY 2 cut(s) 1912, 2506
PvuII CAGCTG 2 cut(s) 2350, 2780
RsaI GTAC 3 cut(s) 48, 268, 614
RsaNI GTAC 3 cut(s) 47, 267, 613
RseI CAYNNNNRTG 3 cut(s) 2073, 2190, 2225
SapI GCTCTTC 1 cut(s) 2354
SaqAI TTAA 7 cut(s) 654, 894, 1491, 1517, 1899, 2223, 2279
SatI GCNGC 9 cut(s) 570, 905, 1614, 2136, 2167, 2348, 2582, 2689, 2781
Sau96I GGNCC 3 cut(s) 1055, 1170, 2438
SchI GAGTC 5 cut(s) 255, 653, 1254, 2247, 2546
ScrFI CCNGG 5 cut(s) 690, 812, 886, 1296, 2216
SduI GDGCHC 4 cut(s) 592, 1669, 1803, 2750
SfaNI GCATC 7 cut(s) 195, 352, 592, 1126, 1408, 2122, 2595
SfcI CTRYAG 6 cut(s) 799, 922, 1222, 1473, 1908, 2371
Sfr274I CTCGAG 2 cut(s) 2257, 2735
SinI GGWCC 1 cut(s) 2438
SlaI CTCGAG 2 cut(s) 2257, 2735
SmiMI CAYNNNNRTG 3 cut(s) 2073, 2190, 2225
SmlI CTYRAG 7 cut(s) 63, 100, 500, 607, 2257, 2735, 2758
SmoI CTYRAG 7 cut(s) 63, 100, 500, 607, 2257, 2735, 2758
SpeI ACTAGT 1 cut(s) 1636
SsiI CCGC 6 cut(s) 746, 1292, 1614, 1747, 1752, 2496
SspI AATATT 1 cut(s) 2209
StyD4I CCNGG 5 cut(s) 688, 810, 884, 1294, 2214
StyI CCWWGG 1 cut(s) 2600
TaaI ACNGT 6 cut(s) 215, 382, 1223, 1470, 2311, 2375
TaiI ACGT 6 cut(s) 713, 731, 1022, 1125, 2493, 2529
TauI GCSGC 1 cut(s) 1616
TfiI GAWTC 7 cut(s) 146, 388, 636, 702, 1043, 1288, 1700
Tru1I TTAA 7 cut(s) 654, 894, 1491, 1517, 1899, 2223, 2279
Tru9I TTAA 7 cut(s) 654, 894, 1491, 1517, 1899, 2223, 2279
TscAI CASTG 6 cut(s) 541, 939, 1180, 1749, 2299, 2465
TseFI GTSAC 5 cut(s) 382, 997, 1118, 1246, 1942
TseI GCWGC 8 cut(s) 569, 904, 2135, 2166, 2347, 2581, 2688, 2780
Tsp45I GTSAC 5 cut(s) 382, 997, 1118, 1246, 1942
TspDTI ATGAA 9 cut(s) 478, 767, 993, 1007, 1359, 1774, 1782, 1889, 2174
TspGWI ACGGA 2 cut(s) 1090, 2468
TspRI CASTG 6 cut(s) 541, 939, 1180, 1749, 2299, 2465
Van91I CCANNNNNTGG 1 cut(s) 125
VpaK11BI GGWCC 1 cut(s) 2438
XapI RAATTY 4 cut(s) 580, 890, 1500, 1968
XbaI TCTAGA 1 cut(s) 1402
XceI RCATGY 1 cut(s) 36
XhoI CTCGAG 2 cut(s) 2257, 2735
XmiI GTMKAC 2 cut(s) 1860, 2370
Zsp2I ATGCAT 2 cut(s) 1401, 2049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.