MD13G1108000.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0014515
Physical Location & Seq
Reverse (-)
7737955 .. 7743508
5554 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1108000.v1.1.491

Sequence Viewer

Length: 2637 bp
ATGTCCCGGGGCAAATCAGTCCAGGTCGAAAACCCTAATGGAAACCAGCTGCAGTTTCAGAAACGCAGGGATTTTCCCATAGACAGCAAGAAGTACTGCTACACACTGAACACTGTGGAGAGGAGGAGGTATTTAGTCCGGGCAACGTTTCAGTACGGCAGTCTCAAAAGTGAAGACACATATCCGAAATTCGAGCTTTACTTGGATGCCACGCAGTGGGCAACCGTGACTATTTTTGATGCTTCAAGAACTTATGTGAATGAAATGATCATTAGGGCTTCGTCCAAGTCGGTTGATGTGTGTATATGTTGTGCAACAACAGGGTTTCCGTTTATATCGACTTTGGAGCTGAGACCTTTCAATCTTTCGATGTACGCCACGGATTTTGAGGATAAGTTTTTCCTGAAAGTTGCAGCTAGGGTAAATTTTGGTGCTTCAAGCAAAGATGCCATAAGGTACCCAGATGATCCATATGACAGAATTTGGGATTCTGATCTTGTGAAAAGGCAGAACTATCTAGTTGGAGTGGCACCAGGTACAGAAAGAATCAGTACATCAAGGGATGTAGACACAAGGAGTAAAGAATACCCGCCGGTGAAAGTAATGCAGACCGCGGTTGTTGGTACGAAGGAAGTGTTGAGCTACAGATTGAATCTTGATGGCTTCCCAGGAATGGCTCGAGCTTATGCTTACTTCGCGGAAATTGAGGATTTAGGAGCAAATGAGAGTCGAAAGTTCAGGTTAGAGCAACCTAATTTGGCTGATTATAACAGAGCAGTTGTAAATATTGCTGAGAACGCAAATGGAGACTATACTCTTTATGAGCCGAGCTACATGAATGTGAGTCTGGAGTTTGTTCTGTCATTTTCCTTTCGTGAGACCCCTGATTCTACGCGAGGGCCACTTCTAAATGCAATGGAGATAAGTAAATATGTTCAAATTGCTGCGAAGACCGATAGGCAAGATTTGGCGGTTCTCAATGTGCTTCGCTTCATGTCTGCTGAAAGTCTGTCGGTAGATGAAGGCGATCCTTGTGTTCCAACTCCGTGGGAATGGGTGAATTGTAGCTCCACAGCACCTTTGAGAATCACAAAAATTGACCTGTCAGGAAAGAATGTGAAGGGTGAAATCCCCGTGGAGCTTAAAAACATGCAGGATTTGACAGAATTGTGGTTGGATGGTAACTACCTAACTGGACAATTTCCTGACATTAGTAATCTTATCTATCTAAAGATTCTTCATCTGGAGAATAACAAATTCACTGGTGCACTACCTTCTTACCTGGCTAGCTTGCCAAGCTTACAAGAACTGTACATACAGAACAACTCTTTCAGCGGGGAGATTCCTGCAGGACTGTTAACTGGGAAAATCAAATTTAAATATGAATATAATCTCGGACTACGTAAGGGGGAACGAAAACAGAAGCATGTCAAGTTGATAATTGGAATTTCTGTCGGAGTACTTGCAATTGTATCACTTTTATTATTGGGGACTCTATTGATATTGCGTAATCTTCGAAGAAAGTCATCTCTTCAGAGAAGTAATGGAAAAGGTGACTCTCTGCGTGCCAGCACCAAGCCTTCAACTCACTATTCAATTTCTCGGAAGGATGAAGGCGTAGCTTGCTACATTACACTTCCTGATCTGGAAGAAGCGACTAATAACTTCTCAAAAAAAATTGGCAAAGGAAGCTTTGGATCCGTATATTATGGAAAGATGAAAGATGGAAAGGAGATAGCGGTTAAAATGATGGCGGATTCATCTACCCACATGAATAAGCAATTTGTAACTGAGGTAGCACTCTTGTCACGAATTCATCATCGAAACTTGGTTCCTCTAATTGGATACTGTGAGGAAGAACATCAATGCATTCTGGTTTACGAGTATATGCACAATGGCACCTTACGCGATCACATACACGGTTCTACCACTCAGAAGCGCTTGGACTGGCAAATGCGCCTTCGCATTGCAGAAGATGCAGCTAGAGGTCTCGAGTACTTGCACACTGGATGCAACCCTAGTATCATCCACCGGGACGTGAAAACAAGCAACATTCTCTTAGACATAAACATGAGAGCAAAAGTATCAGATTTTGGATTGTCTAGGCAAGCGGAAGAGGATTTAACGCACATATCTAGCGTGGCACGTGGAACAGTAGGCTACCTTGACCCCGAGTATTATGCTAGTCAGCAATTAACTGAGAAAAGCGATGTGTACAGTTTTGGGGTTGTTCTTTTGGAATTGATTTCAGGAAAAAAGGTTGTTTCAGAAGAAGACTTTGGTTCTGAGTTGAACATTGTTCACTGGGCAAGATCCTTGATTCATAAAGGGGATGTGGAAAGCATCATGGATCCTGTCCTAGTAGGAAGTGTGAAAATTGAATCGATTTGGAGAATTGCCGAAGTTGCAATCCAGTGTGTTGAGCAACGTGGAGTTTCGAGGCCAAGAATGCAGGAAATAATTGTGGCCGTTCAAGATGCTATGAAGATTGAAAAGGGCAGTGAATCCAACCGGAAAATATCACCCAGCAGTAGCACTTCAAAAGCACAATCCTCCAGGAAAACTTTGCTAACAAGCTTTCTTGAAATCGAGAGCCCTGACTTGTCCAAGGATTGCCTAGTCCCATCTGCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8 Malectin_like Pkinase_Tyr

Protein Analysis

879

Amino Acids

98.96

Weight (kDa)

8.04

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 3 - 310 4.8e-72 Malectin-like domain
LRR_8 PF13855 387 - 443 8.3e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 556 - 770 2.8e-49 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 557 - 759 6.9e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014515)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67720
fragaria_vesca FvH4_4g24900 FvH4_4g24900 FvH4_4g24900
malus_domestica MD13G1108000.v1.1 MD16G1108100.v1.1
prunus_persica Prupe.1G238400_v2.0.a1 Prupe.1G238400_v2.0.a1
pyrus_communis pycom16g09210
rosa_chinensis RchiOBHm_Chr4g0431961
rosa_laevigata RLG00000006871
rosa_multiflora Rmu_sc0004965.1_g000014
rosa_roxburghii Rroxscaffold_5G00373400
rosa_rugosa Rorug04G0253600 Rorug04G0253700
rosa_samantha Rh4BG317900
rosa_wichuraiana Rw4G027040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 768
Acc65I GGTACC 1 cut(s) 456
AccB1I GGYRCC 3 cut(s) 456, 529, 1898
AccB7I CCANNNNNTGG 1 cut(s) 216
AccI GTMKAC 1 cut(s) 567
AccII CGCG 4 cut(s) 614, 698, 895, 1908
AciI CCGC 9 cut(s) 590, 612, 614, 698, 971, 1335, 1739, 1754, 2111
AclI AACGTT 1 cut(s) 146
AclWI GGATC 7 cut(s) 461, 1022, 1692, 1705, 2307, 2345, 2358
AcoI YGGCCR 1 cut(s) 2466
AcsI RAATTY 7 cut(s) 188, 424, 480, 1256, 1373, 1446, 1812
AcuI CTGAAG 1 cut(s) 1517
AcvI CACGTG 1 cut(s) 2147
AdeI CACNNNGTG 1 cut(s) 216
AfeI AGCGCT 1 cut(s) 1940
AfiI CCNNNNNNNGG 3 cut(s) 216, 673, 1841
AjiI CACGTC 1 cut(s) 2038
AjnI CCWGG 5 cut(s) 21, 532, 667, 1281, 2555
AjuI GAANNNNNNNTTGG 2 cut(s) 2262, 2294
Alw21I GWGCWC 1 cut(s) 1270
Alw26I GTCTC 5 cut(s) 167, 346, 801, 872, 1994
Alw44I GTGCAC 1 cut(s) 1266
AlwI GGATC 7 cut(s) 461, 1022, 1692, 1705, 2307, 2345, 2358
Ama87I CYCGRG 4 cut(s) 6, 678, 1991, 2171
Aor51HI AGCGCT 1 cut(s) 1940
AoxI GGCC 3 cut(s) 899, 2441, 2466
ApaLI GTGCAC 1 cut(s) 1266
ApeKI GCWGC 4 cut(s) 49, 413, 944, 1979
ApoI RAATTY 7 cut(s) 188, 424, 480, 1256, 1373, 1446, 1812
Asp718I GGTACC 1 cut(s) 456
AspLEI GCGC 2 cut(s) 1941, 1959
AspS9I GGNCC 1 cut(s) 899
AsuC2I CCSGG 4 cut(s) 7, 8, 140, 2033
AsuHPI GGTGA 5 cut(s) 607, 1069, 1136, 1565, 2514
AsuII TTCGAA 1 cut(s) 1516
AsuNHI GCTAGC 1 cut(s) 1286
AvaI CYCGRG 4 cut(s) 6, 678, 1991, 2171
BaeGI GKGCMC 1 cut(s) 1270
BaeI ACNNNNGTAYC 2 cut(s) 2005, 2038
BamHI GGATCC 2 cut(s) 1697, 2350
BanI GGYRCC 3 cut(s) 456, 529, 1898
BanII GRGCYC 1 cut(s) 2597
BarI GAAGNNNNNNTAC 2 cut(s) 83, 115
BbrPI CACGTG 1 cut(s) 2147
BbsI GAAGAC 3 cut(s) 180, 956, 2280
Bbv12I GWGCWC 1 cut(s) 1270
BbvI GCAGC 4 cut(s) 36, 425, 931, 1991
BccI CCATC 5 cut(s) 653, 1172, 1718, 1744, 2632
BceAI ACGGC 2 cut(s) 172, 2453
BcgI CGANNNNNNTGC 2 cut(s) 2162, 2196
BciT130I CCWGG 5 cut(s) 23, 534, 669, 1283, 2557
BciVI GTATCC 1 cut(s) 1838
BclI TGATCA 1 cut(s) 267
BcnI CCSGG 4 cut(s) 7, 8, 140, 2033
BcoDI GTCTC 5 cut(s) 167, 346, 801, 872, 1994
BfmI CTRYAG 3 cut(s) 50, 643, 1347
BfoI RGCGCY 1 cut(s) 1942
BfuI GTATCC 1 cut(s) 1838
BisI GCNGC 4 cut(s) 50, 414, 945, 1980
BlsI GCNGC 4 cut(s) 51, 415, 946, 1981
BmcAI AGTACT 3 cut(s) 95, 1461, 1997
Bme1390I CCNGG 9 cut(s) 7, 8, 23, 140, 534, 669, 1283, 2033, 2557
BmeT110I CYCGRG 4 cut(s) 6, 678, 1991, 2171
BmgBI CACGTC 1 cut(s) 2038
BmgT120I GGNCC 1 cut(s) 899
BmiI GGNNCC 6 cut(s) 458, 531, 1699, 1833, 1900, 2352
BmrFI CCNGG 9 cut(s) 7, 8, 23, 140, 534, 669, 1283, 2033, 2557
BmrI ACTGGG 2 cut(s) 1371, 2314
BmsI GCATC 7 cut(s) 196, 229, 436, 1966, 2000, 2352, 2467
BmtI GCTAGC 1 cut(s) 1290
BmuI ACTGGG 2 cut(s) 1371, 2314
BpiI GAAGAC 3 cut(s) 180, 956, 2280
BpmI CTGGAG 3 cut(s) 869, 1265, 2539
Bpu14I TTCGAA 1 cut(s) 1516
BpuMI CCSGG 4 cut(s) 7, 8, 140, 2033
Bsa29I ATCGAT 1 cut(s) 2384
BsaAI YACGTR 2 cut(s) 1403, 2147
BsaBI GATNNNNATC 1 cut(s) 492
BsaI GGTCTC 3 cut(s) 346, 872, 1994
BsaJI CCNNGG 8 cut(s) 6, 7, 378, 612, 667, 1046, 1134, 2607
BsaWI WCCGGW 1 cut(s) 2511
Bsc4I CCNNNNNNNGG 3 cut(s) 216, 673, 1841
Bse118I RCCGGY 1 cut(s) 592
Bse1I ACTGG 7 cut(s) 1198, 1267, 1366, 1952, 2011, 2309, 2413
Bse3DI GCAATG 2 cut(s) 921, 1965
Bse8I GATNNNNATC 1 cut(s) 492
BseBI CCWGG 5 cut(s) 23, 534, 669, 1283, 2557
BseCI ATCGAT 1 cut(s) 2384
BseDI CCNNGG 8 cut(s) 6, 7, 378, 612, 667, 1046, 1134, 2607
BseGI GGATG 7 cut(s) 211, 568, 1183, 1615, 2015, 2025, 2338
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 3 cut(s) 216, 673, 1841
BseMI GCAATG 2 cut(s) 921, 1965
BseMII CTCAG 6 cut(s) 341, 783, 1782, 1946, 2190, 2277
BseNI ACTGG 7 cut(s) 1198, 1267, 1366, 1952, 2011, 2309, 2413
BseRI GAGGAG 2 cut(s) 136, 139
BseSI GKGCMC 1 cut(s) 1270
BseXI GCAGC 4 cut(s) 36, 425, 931, 1991
BseYI CCCAGC 1 cut(s) 2525
Bsh1236I CGCG 4 cut(s) 614, 698, 895, 1908
BshFI GGCC 3 cut(s) 901, 2443, 2468
BshNI GGYRCC 3 cut(s) 456, 529, 1898
BshVI ATCGAT 1 cut(s) 2384
BsiHKAI GWGCWC 1 cut(s) 1270
BsiHKCI CYCGRG 4 cut(s) 6, 678, 1991, 2171
BsiSI CCGG 5 cut(s) 7, 139, 593, 2032, 2512
BslFI GGGAC 3 cut(s) 1504, 2048, 2606
BslI CCNNNNNNNGG 3 cut(s) 216, 673, 1841
BsmAI GTCTC 5 cut(s) 167, 346, 801, 872, 1994
BsmFI GGGAC 3 cut(s) 1504, 2048, 2606
BsmI GAATGC 2 cut(s) 1869, 2454
BsnI GGCC 3 cut(s) 901, 2443, 2468
Bso31I GGTCTC 3 cut(s) 346, 872, 1994
BsoBI CYCGRG 4 cut(s) 6, 678, 1991, 2171
Bsp119I TTCGAA 1 cut(s) 1516
Bsp1286I GDGCHC 2 cut(s) 1270, 2597
Bsp1407I TGTACA 2 cut(s) 1311, 2214
Bsp143I GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
BspACI CCGC 9 cut(s) 590, 612, 614, 698, 971, 1335, 1739, 1754, 2111
BspANI GGCC 3 cut(s) 901, 2443, 2468
BspCNI CTCAG 6 cut(s) 342, 784, 1783, 1945, 2191, 2278
BspDI ATCGAT 1 cut(s) 2384
BspFNI CGCG 4 cut(s) 614, 698, 895, 1908
BspLI GGNNCC 6 cut(s) 458, 531, 1699, 1833, 1900, 2352
BspMAI CTGCAG 2 cut(s) 54, 1351
BspOI GCTAGC 1 cut(s) 1290
BspPI GGATC 7 cut(s) 461, 1022, 1692, 1705, 2307, 2345, 2358
BspT104I TTCGAA 1 cut(s) 1516
BspT107I GGYRCC 3 cut(s) 456, 529, 1898
BspTNI GGTCTC 3 cut(s) 346, 872, 1994
BsrDI GCAATG 2 cut(s) 921, 1965
BsrFI RCCGGY 1 cut(s) 592
BsrGI TGTACA 2 cut(s) 1311, 2214
BsrI ACTGG 7 cut(s) 1198, 1267, 1366, 1952, 2011, 2309, 2413
BssAI RCCGGY 1 cut(s) 592
BssECI CCNNGG 8 cut(s) 6, 7, 378, 612, 667, 1046, 1134, 2607
BssMI GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
BssT1I CCWWGG 1 cut(s) 2607
Bst2UI CCWGG 5 cut(s) 23, 534, 669, 1283, 2557
Bst4CI ACNGT 8 cut(s) 115, 226, 1311, 1356, 1850, 1922, 2155, 2219
Bst6I CTCTTC 2 cut(s) 1536, 2109
BstAPI GCANNNNNTGC 1 cut(s) 1976
BstAUI TGTACA 2 cut(s) 1311, 2214
BstBAI YACGTR 2 cut(s) 1403, 2147
BstBI TTCGAA 1 cut(s) 1516
BstC8I GCNNGC 6 cut(s) 1288, 1292, 1566, 1570, 1624, 2109
BstDEI CTNAG 7 cut(s) 350, 792, 1791, 1932, 2059, 2199, 2286
BstDSI CCRYGG 4 cut(s) 378, 612, 1046, 1134
BstF5I GGATG 7 cut(s) 211, 568, 1183, 1615, 2015, 2025, 2338
BstFNI CGCG 4 cut(s) 614, 698, 895, 1908
BstH2I RGCGCY 1 cut(s) 1942
BstHHI GCGC 2 cut(s) 1941, 1959
BstKTI GATC 9 cut(s) 270, 469, 496, 1030, 1645, 1700, 1912, 2315, 2353
BstMAI GTCTC 5 cut(s) 167, 346, 801, 872, 1994
BstMBI GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
BstMWI GCNNNNNNNGC 9 cut(s) 695, 797, 1296, 1623, 1689, 1905, 1976, 2405, 2449
BstNI CCWGG 5 cut(s) 23, 534, 669, 1283, 2557
BstNSI RCATGY 2 cut(s) 1153, 1430
BstSCI CCNGG 9 cut(s) 5, 6, 21, 138, 532, 667, 1281, 2031, 2555
BstSFI CTRYAG 3 cut(s) 50, 643, 1347
BstSLI GKGCMC 1 cut(s) 1270
BstSNI TACGTA 1 cut(s) 1403
BstUI CGCG 4 cut(s) 614, 698, 895, 1908
BstV1I GCAGC 4 cut(s) 36, 425, 931, 1991
BstV2I GAAGAC 3 cut(s) 180, 956, 2280
BstX2I RGATCY 3 cut(s) 1697, 2312, 2350
BstXI CCANNNNNNTGG 1 cut(s) 1047
BstYI RGATCY 3 cut(s) 1697, 2312, 2350
Bsu15I ATCGAT 1 cut(s) 2384
BsuI GTATCC 1 cut(s) 1838
BsuRI GGCC 3 cut(s) 901, 2443, 2468
BsuTUI ATCGAT 1 cut(s) 2384
BtgI CCRYGG 4 cut(s) 378, 612, 1046, 1134
BtgZI GCGATG 1 cut(s) 2223
BtrI CACGTC 1 cut(s) 2038
BtsCI GGATG 7 cut(s) 211, 568, 1183, 1615, 2015, 2025, 2338
BtsI GCAGTG 2 cut(s) 221, 2506
BtsIMutI CAGTG 8 cut(s) 104, 111, 221, 1260, 2004, 2302, 2420, 2506
Cac8I GCNNGC 6 cut(s) 1288, 1292, 1566, 1570, 1624, 2109
CfoI GCGC 2 cut(s) 1941, 1959
Cfr10I RCCGGY 1 cut(s) 592
Cfr13I GGNCC 1 cut(s) 899
Cfr42I CCGCGG 1 cut(s) 615
Cfr9I CCCGGG 1 cut(s) 6
ClaI ATCGAT 1 cut(s) 2384
CsiI ACCWGGT 1 cut(s) 532
CspCI CAANNNNNGTGG 2 cut(s) 367, 402
CviAII CATG 7 cut(s) 835, 994, 1150, 1427, 1771, 2071, 2347
DdeI CTNAG 7 cut(s) 350, 792, 1791, 1932, 2059, 2199, 2286
DpnI GATC 9 cut(s) 269, 468, 495, 1029, 1644, 1699, 1911, 2314, 2352
DpnII GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
DraI TTTAAA 1 cut(s) 1378
DraIII CACNNNGTG 1 cut(s) 216
EaeI YGGCCR 1 cut(s) 2466
Eam1104I CTCTTC 2 cut(s) 1536, 2109
EarI CTCTTC 2 cut(s) 1536, 2109
EciI GGCGGA 1 cut(s) 1769
Eco105I TACGTA 1 cut(s) 1403
Eco130I CCWWGG 1 cut(s) 2607
Eco24I GRGCYC 1 cut(s) 2597
Eco31I GGTCTC 3 cut(s) 346, 872, 1994
Eco47III AGCGCT 1 cut(s) 1940
Eco57I CTGAAG 1 cut(s) 1517
Eco72I CACGTG 1 cut(s) 2147
Eco88I CYCGRG 4 cut(s) 6, 678, 1991, 2171
EcoRI GAATTC 1 cut(s) 1812
EcoRII CCWGG 5 cut(s) 21, 532, 667, 1281, 2555
EcoT14I CCWWGG 1 cut(s) 2607
EcoT22I ATGCAT 1 cut(s) 1871
EcoT38I GRGCYC 1 cut(s) 2597
ErhI CCWWGG 1 cut(s) 2607
FaeI CATG 7 cut(s) 838, 997, 1153, 1430, 1774, 2074, 2350
FaqI GGGAC 3 cut(s) 1504, 2048, 2606
FatI CATG 7 cut(s) 834, 993, 1149, 1426, 1770, 2070, 2346
FauI CCCGC 2 cut(s) 597, 1328
FauNDI CATATG 1 cut(s) 472
FbaI TGATCA 1 cut(s) 267
FblI GTMKAC 1 cut(s) 567
Fnu4HI GCNGC 4 cut(s) 50, 414, 945, 1980
FokI GGATG 7 cut(s) 218, 575, 1190, 1622, 2012, 2022, 2345
FriOI GRGCYC 1 cut(s) 2597
Fsp4HI GCNGC 4 cut(s) 50, 414, 945, 1980
GlaI GCGC 2 cut(s) 1940, 1958
GluI GCNGC 4 cut(s) 50, 414, 945, 1980
GsaI CCCAGC 1 cut(s) 2529
GsuI CTGGAG 3 cut(s) 869, 1265, 2539
HaeII RGCGCY 1 cut(s) 1942
HaeIII GGCC 3 cut(s) 901, 2443, 2468
HapII CCGG 5 cut(s) 7, 139, 593, 2032, 2512
HhaI GCGC 2 cut(s) 1941, 1959
Hin1II CATG 7 cut(s) 838, 997, 1153, 1430, 1774, 2074, 2350
Hin6I GCGC 2 cut(s) 1939, 1957
HinP1I GCGC 2 cut(s) 1939, 1957
HincII GTYRAC 1 cut(s) 1359
HindII GTYRAC 1 cut(s) 1359
HindIII AAGCTT 3 cut(s) 1297, 1690, 2575
HpaI GTTAAC 1 cut(s) 1359
HpaII CCGG 5 cut(s) 7, 139, 593, 2032, 2512
HphI GGTGA 5 cut(s) 607, 1069, 1136, 1565, 2514
Hpy166II GTNNAC 6 cut(s) 568, 1268, 1359, 1879, 2215, 2302
Hpy8I GTNNAC 6 cut(s) 568, 1268, 1359, 1879, 2215, 2302
HpyAV CCTTC 8 cut(s) 622, 1016, 1114, 1284, 1590, 1600, 1607, 1970
HpyCH4III ACNGT 8 cut(s) 115, 226, 1311, 1356, 1850, 1922, 2155, 2219
HpyCH4IV ACGT 5 cut(s) 146, 1402, 2037, 2146, 2428
HpyF10VI GCNNNNNNNGC 9 cut(s) 695, 797, 1296, 1623, 1689, 1905, 1976, 2405, 2449
HpyF3I CTNAG 7 cut(s) 350, 792, 1791, 1932, 2059, 2199, 2286
HpySE526I ACGT 5 cut(s) 146, 1402, 2037, 2146, 2428
Hsp92II CATG 7 cut(s) 838, 997, 1153, 1430, 1774, 2074, 2350
HspAI GCGC 2 cut(s) 1939, 1957
KpnI GGTACC 1 cut(s) 460
Ksp22I TGATCA 1 cut(s) 267
KspAI GTTAAC 1 cut(s) 1359
KspI CCGCGG 1 cut(s) 615
Kzo9I GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
LmnI GCTCC 4 cut(s) 346, 716, 1073, 1138
Lsp1109I GCAGC 4 cut(s) 36, 425, 931, 1991
LweI GCATC 7 cut(s) 196, 229, 436, 1966, 2000, 2352, 2467
MabI ACCWGGT 1 cut(s) 532
MaeII ACGT 5 cut(s) 146, 1402, 2037, 2146, 2428
MaeIII GTNAC 5 cut(s) 226, 1181, 1553, 1786, 1806
MalI GATC 9 cut(s) 269, 468, 495, 1029, 1644, 1699, 1911, 2314, 2352
MboI GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
MfeI CAATTG 1 cut(s) 1467
MflI RGATCY 3 cut(s) 1697, 2312, 2350
MhlI GDGCHC 2 cut(s) 1270, 2597
MlyI GAGTC 4 cut(s) 736, 853, 1486, 1550
MmeI TCCRAC 5 cut(s) 502, 1064, 1155, 1435, 2532
Mph1103I ATGCAT 1 cut(s) 1871
MseI TTAA 6 cut(s) 1143, 1358, 1377, 1743, 2123, 2195
MslI CAYNNNNRTG 2 cut(s) 839, 2069
MspA1I CMGCKG 3 cut(s) 49, 614, 1335
MspI CCGG 5 cut(s) 7, 139, 593, 2032, 2512
MspR9I CCNGG 9 cut(s) 7, 8, 23, 140, 534, 669, 1283, 2033, 2557
MunI CAATTG 1 cut(s) 1467
Mva1269I GAATGC 2 cut(s) 1869, 2454
MvaI CCWGG 5 cut(s) 23, 534, 669, 1283, 2557
MvnI CGCG 4 cut(s) 614, 698, 895, 1908
MwoI GCNNNNNNNGC 9 cut(s) 695, 797, 1296, 1623, 1689, 1905, 1976, 2405, 2449
NciI CCSGG 4 cut(s) 7, 8, 140, 2033
NdeI CATATG 1 cut(s) 472
NdeII GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
NheI GCTAGC 1 cut(s) 1286
NlaIII CATG 7 cut(s) 838, 997, 1153, 1430, 1774, 2074, 2350
NlaIV GGNNCC 6 cut(s) 458, 531, 1699, 1833, 1900, 2352
NmeAIII GCCGAG 1 cut(s) 852
NmuCI GTSAC 3 cut(s) 226, 1553, 1806
NsiI ATGCAT 1 cut(s) 1871
NspI RCATGY 2 cut(s) 1153, 1430
NspV TTCGAA 1 cut(s) 1516
PaeR7I CTCGAG 2 cut(s) 678, 1991
PctI GAATGC 2 cut(s) 1869, 2454
PflMI CCANNNNNTGG 1 cut(s) 216
PfoI TCCNGGA 1 cut(s) 2555
PkrI GCNGC 4 cut(s) 51, 415, 946, 1981
PleI GAGTC 4 cut(s) 735, 852, 1486, 1550
PmaCI CACGTG 1 cut(s) 2147
PmlI CACGTG 1 cut(s) 2147
PpsI GAGTC 4 cut(s) 735, 852, 1486, 1550
Ppu21I YACGTR 2 cut(s) 1403, 2147
PsiI TTATAA 1 cut(s) 768
Psp1406I AACGTT 1 cut(s) 146
Psp6I CCWGG 5 cut(s) 21, 532, 667, 1281, 2555
PspCI CACGTG 1 cut(s) 2147
PspFI CCCAGC 1 cut(s) 2525
PspGI CCWGG 5 cut(s) 21, 532, 667, 1281, 2555
PspN4I GGNNCC 6 cut(s) 458, 531, 1699, 1833, 1900, 2352
PspPI GGNCC 1 cut(s) 899
PspXI VCTCGAGB 1 cut(s) 678
PsrI GAACNNNNNNTAC 2 cut(s) 1299, 1331
PstI CTGCAG 2 cut(s) 54, 1351
PsuI RGATCY 3 cut(s) 1697, 2312, 2350
PvuII CAGCTG 1 cut(s) 49
RseI CAYNNNNRTG 2 cut(s) 839, 2069
SacII CCGCGG 1 cut(s) 615
SaqAI TTAA 6 cut(s) 1143, 1358, 1377, 1743, 2123, 2195
SatI GCNGC 4 cut(s) 50, 414, 945, 1980
Sau3AI GATC 9 cut(s) 267, 466, 493, 1027, 1642, 1697, 1909, 2312, 2350
Sau96I GGNCC 1 cut(s) 899
SbfI CCTGCAGG 1 cut(s) 1351
ScaI AGTACT 3 cut(s) 95, 1461, 1997
SchI GAGTC 4 cut(s) 736, 853, 1486, 1550
ScrFI CCNGG 9 cut(s) 7, 8, 23, 140, 534, 669, 1283, 2033, 2557
SdaI CCTGCAGG 1 cut(s) 1351
SduI GDGCHC 2 cut(s) 1270, 2597
SexAI ACCWGGT 1 cut(s) 532
SfaNI GCATC 7 cut(s) 196, 229, 436, 1966, 2000, 2352, 2467
SfcI CTRYAG 3 cut(s) 50, 643, 1347
Sfr274I CTCGAG 2 cut(s) 678, 1991
Sfr303I CCGCGG 1 cut(s) 615
SfuI TTCGAA 1 cut(s) 1516
SgrAI CRCCGGYG 1 cut(s) 592
SgrBI CCGCGG 1 cut(s) 615
SlaI CTCGAG 2 cut(s) 678, 1991
SmaI CCCGGG 1 cut(s) 8
SmiI ATTTAAAT 1 cut(s) 1378
SmiMI CAYNNNNRTG 2 cut(s) 839, 2069
SmlI CTYRAG 2 cut(s) 678, 1991
SmoI CTYRAG 2 cut(s) 678, 1991
SnaBI TACGTA 1 cut(s) 1403
Sse8387I CCTGCAGG 1 cut(s) 1351
SsiI CCGC 9 cut(s) 590, 612, 614, 698, 971, 1335, 1739, 1754, 2111
SspI AATATT 1 cut(s) 787
StyD4I CCNGG 9 cut(s) 5, 6, 21, 138, 532, 667, 1281, 2031, 2555
StyI CCWWGG 1 cut(s) 2607
SwaI ATTTAAAT 1 cut(s) 1378
TaaI ACNGT 8 cut(s) 115, 226, 1311, 1356, 1850, 1922, 2155, 2219
TaiI ACGT 5 cut(s) 149, 1405, 2040, 2149, 2431
TaqII GACCGA 1 cut(s) 968
TatI WGTACW 6 cut(s) 93, 551, 1311, 1459, 1995, 2214
Tru1I TTAA 6 cut(s) 1143, 1358, 1377, 1743, 2123, 2195
Tru9I TTAA 6 cut(s) 1143, 1358, 1377, 1743, 2123, 2195
TscAI CASTG 8 cut(s) 111, 118, 221, 1267, 2011, 2309, 2420, 2506
TseFI GTSAC 3 cut(s) 226, 1553, 1806
TseI GCWGC 4 cut(s) 49, 413, 944, 1979
Tsp45I GTSAC 3 cut(s) 226, 1553, 1806
TspGWI ACGGA 4 cut(s) 318, 395, 1035, 1690
TspMI CCCGGG 1 cut(s) 6
TspRI CASTG 8 cut(s) 111, 118, 221, 1267, 2011, 2309, 2420, 2506
Van91I CCANNNNNTGG 1 cut(s) 216
VneI GTGCAC 1 cut(s) 1266
XapI RAATTY 7 cut(s) 188, 424, 480, 1256, 1373, 1446, 1812
XceI RCATGY 2 cut(s) 1153, 1430
XhoI CTCGAG 2 cut(s) 678, 1991
XmaI CCCGGG 1 cut(s) 6
XmiI GTMKAC 1 cut(s) 567
ZrmI AGTACT 3 cut(s) 95, 1461, 1997
Zsp2I ATGCAT 1 cut(s) 1871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.