AT1G75500

Protein WALLS ARE THIN

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
28337726 .. 28340275
2550 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G75500.1

Sequence Viewer

Length: 1170 bp
ATGGCGGATAACACCGATAATCGGAGATCCTTATGGGGAGTTCCGGAGAAGCTTCAGCTTCACATAGCGATGCTGACGTTGCAATTCGGTTACGCCGGATTCCACGTGGTGTCTCGAGCTGCTCTTAACATGGGAATCAGCAAACTCGTCTTCCCTGTTTATCGTAACATCATCGCCTTGCTTCTTCTCCTTCCCTTCGCTTACTTCCTTGAAAAGAAGGAGAGACCAGCGATTACTCTCAACTTTCTCATCCAGTTCTTCTTTTTGGCACTCATAGGAATAACAGCGAACCAAGGATTTTACTTGTTGGGACTGGACAACACTTCACCAACATTTGCTTCCTCCATGCAAAACTCTGTTCCCGCCATTACCTTTCTCATGGCTGCTCTTCTCAGGATTGAGAAAGTAAGAATAAACAGAAGAGACGGTATCTCCAAAATCTTAGGAACAGCTCTTTGTGTCGCCGGAGCTTCCGTCATCACCCTCTATAAAGGTCCAACCATCTACACTCCGGCTAGCCACCTCCACGCTCATCTACTCACCACAAACTCCGCCGTCTTAGCGCCGCTAGGAAACGCCGCGCCTAAAAACTGGACCCTTGGTTGCATCTACCTAATCGGTCACTGTCTCTCGTGGTCAGGCTGGCTTGTTTTCCAAGCTCCGGTTCTTAAGTCTTATCCAGCGAGGCTCTCGGTTACGTCTTACACTTGTTTCTTCGGAATCATTCAGTTCTTGATCATTGCTGCTTTCTGTGAAAGAGATTCTCAGGCTTGGGTTTTTCACTCCGGTTGGGAGCTTTTCACCATCCTCTACGCCGGAATCGTAGCGTCTGGAATCGCGTTTGCGGTTCAGATTTGGTGTATTGACAGAGGGGGTCCAGTCTTCGTTGCTGTTTACCAGCCTGTTCAGACTCTTGTCGTTGCGATCATGGCTTCTATTGCGTTAGGCGAAGAATTTTATTTGGGCGGGATTATTGGAGCGGTCTTGATCATAGCGGGACTTTACTTCGTATTGTACGGTAAGAGCGAAGAGAGGAAATTTGCAGCGCTTGAGAAGGCAGCGATCCAGTCCTCCGCGGAGCATGGTATTGAACGTGCACCTGTTTCTCGCAACTCCATCAAGTCGTCCATCACAACACCACTACTCCATCAGTCAACGGACAATGTTTGA

Protein Analysis

389

Amino Acids

42.57

Weight (kDa)

9.16

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 22 - 161 2.2e-13 EamA-like transporter family
EamA PF00892 200 - 338 2.3e-16 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011466)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 980
AccII CGCG 3 cut(s) 581, 839, 1076
AccIII TCCGGA 1 cut(s) 43
AclWI GGATC 2 cut(s) 21, 1057
AcsI RAATTY 2 cut(s) 953, 1037
AcuI CTGAAG 1 cut(s) 38
AcvI CACGTG 1 cut(s) 106
AdeI CACNNNGTG 1 cut(s) 109
AfaI GTAC 1 cut(s) 1016
AfeI AGCGCT 1 cut(s) 1047
AfiI CCNNNNNNNGG 2 cut(s) 21, 661
AflII CTTAAG 1 cut(s) 668
AgsI TTSAA 2 cut(s) 212, 1091
AjuI GAANNNNNNNTTGG 4 cut(s) 322, 354, 648, 680
AluBI AGCT 7 cut(s) 52, 58, 119, 452, 470, 659, 796
AluI AGCT 7 cut(s) 52, 58, 119, 452, 470, 659, 796
Alw21I GWGCWC 1 cut(s) 1099
Alw26I GTCTC 4 cut(s) 117, 217, 417, 632
Alw44I GTGCAC 1 cut(s) 1095
AlwI GGATC 2 cut(s) 21, 1057
Ama87I CYCGRG 1 cut(s) 114
Aor13HI TCCGGA 1 cut(s) 43
Aor51HI AGCGCT 1 cut(s) 1047
ApaLI GTGCAC 1 cut(s) 1095
ApeKI GCWGC 5 cut(s) 119, 383, 743, 1043, 1058
ApoI RAATTY 2 cut(s) 953, 1037
AspLEI GCGC 3 cut(s) 565, 583, 1048
AspS9I GGNCC 3 cut(s) 494, 594, 875
AsuHPI GGTGA 4 cut(s) 318, 472, 532, 793
AsuNHI GCTAGC 1 cut(s) 515
AvaI CYCGRG 1 cut(s) 114
AvaII GGWCC 3 cut(s) 494, 594, 875
BaeGI GKGCMC 1 cut(s) 1099
BauI CACGAG 1 cut(s) 631
BbrPI CACGTG 1 cut(s) 106
BbsI GAAGAC 2 cut(s) 142, 874
Bbv12I GWGCWC 1 cut(s) 1099
BbvI GCAGC 5 cut(s) 106, 370, 730, 1055, 1070
BccI CCATC 5 cut(s) 509, 812, 1124, 1136, 1155
BceAI ACGGC 1 cut(s) 539
BclI TGATCA 2 cut(s) 735, 987
BcoDI GTCTC 4 cut(s) 117, 217, 417, 632
BfaI CTAG 2 cut(s) 516, 569
BfoI RGCGCY 2 cut(s) 566, 1049
BfrI CTTAAG 1 cut(s) 668
BisI GCNGC 7 cut(s) 120, 384, 566, 579, 744, 1044, 1059
BlsI GCNGC 7 cut(s) 121, 385, 567, 580, 745, 1045, 1060
Bme18I GGWCC 3 cut(s) 494, 594, 875
BmeT110I CYCGRG 1 cut(s) 114
BmgT120I GGNCC 3 cut(s) 494, 594, 875
BmiI GGNNCC 2 cut(s) 596, 876
BmsI GCATC 2 cut(s) 60, 615
BmtI GCTAGC 1 cut(s) 519
BoxI GACNNNNGTC 1 cut(s) 914
BpiI GAAGAC 2 cut(s) 142, 874
BpuEI CTTGAG 1 cut(s) 1070
BsaAI YACGTR 1 cut(s) 106
BsaI GGTCTC 1 cut(s) 217
BsaJI CCNNGG 3 cut(s) 292, 598, 1074
BsaWI WCCGGW 3 cut(s) 43, 661, 785
BsaXI ACNNNNNCTCC 6 cut(s) 416, 446, 459, 489, 1128, 1158
Bsc4I CCNNNNNNNGG 2 cut(s) 21, 661
Bse1I ACTGG 5 cut(s) 253, 318, 596, 878, 1066
Bse3DI GCAATG 1 cut(s) 738
BseAI TCCGGA 1 cut(s) 43
BseDI CCNNGG 3 cut(s) 292, 598, 1074
BseGI GGATG 2 cut(s) 249, 804
BseLI CCNNNNNNNGG 2 cut(s) 21, 661
BseMI GCAATG 1 cut(s) 738
BseMII CTCAG 2 cut(s) 406, 779
BseNI ACTGG 5 cut(s) 253, 318, 596, 878, 1066
BseSI GKGCMC 1 cut(s) 1099
BseXI GCAGC 5 cut(s) 106, 370, 730, 1055, 1070
Bsh1236I CGCG 3 cut(s) 581, 839, 1076
BsiHKAI GWGCWC 1 cut(s) 1099
BsiHKCI CYCGRG 1 cut(s) 114
BsiSI CCGG 7 cut(s) 44, 96, 465, 512, 662, 786, 816
BslFI GGGAC 2 cut(s) 324, 1011
BslI CCNNNNNNNGG 2 cut(s) 21, 661
BsmAI GTCTC 4 cut(s) 117, 217, 417, 632
BsmBI CGTCTC 1 cut(s) 417
BsmFI GGGAC 2 cut(s) 324, 1011
Bso31I GGTCTC 1 cut(s) 217
BsoBI CYCGRG 1 cut(s) 114
Bsp1286I GDGCHC 1 cut(s) 1099
Bsp13I TCCGGA 1 cut(s) 43
Bsp143I GATC 5 cut(s) 26, 735, 924, 987, 1062
BspCNI CTCAG 2 cut(s) 405, 778
BspEI TCCGGA 1 cut(s) 43
BspFNI CGCG 3 cut(s) 581, 839, 1076
BspLI GGNNCC 2 cut(s) 596, 876
BspOI GCTAGC 1 cut(s) 519
BspPI GGATC 2 cut(s) 21, 1057
BspQI GCTCTTC 1 cut(s) 393
BspTI CTTAAG 1 cut(s) 668
BspTNI GGTCTC 1 cut(s) 217
BsrBI CCGCTC 1 cut(s) 980
BsrDI GCAATG 1 cut(s) 738
BsrI ACTGG 5 cut(s) 253, 318, 596, 878, 1066
BssECI CCNNGG 3 cut(s) 292, 598, 1074
BssMI GATC 5 cut(s) 26, 735, 924, 987, 1062
BssSI CACGAG 1 cut(s) 631
BssT1I CCWWGG 2 cut(s) 292, 598
Bst2BI CACGAG 1 cut(s) 631
Bst4CI ACNGT 3 cut(s) 428, 626, 1019
Bst6I CTCTTC 3 cut(s) 393, 415, 1023
BstAFI CTTAAG 1 cut(s) 668
BstBAI YACGTR 1 cut(s) 106
BstC8I GCNNGC 2 cut(s) 517, 644
BstDEI CTNAG 4 cut(s) 392, 442, 559, 765
BstDSI CCRYGG 1 cut(s) 1074
BstF5I GGATG 2 cut(s) 249, 804
BstFNI CGCG 3 cut(s) 581, 839, 1076
BstH2I RGCGCY 2 cut(s) 566, 1049
BstHHI GCGC 3 cut(s) 565, 583, 1048
BstKTI GATC 5 cut(s) 29, 738, 927, 990, 1065
BstMAI GTCTC 4 cut(s) 117, 217, 417, 632
BstMBI GATC 5 cut(s) 26, 735, 924, 987, 1062
BstMWI GCNNNNNNNGC 4 cut(s) 79, 560, 929, 938
BstPAI GACNNNNGTC 1 cut(s) 914
BstSLI GKGCMC 1 cut(s) 1099
BstUI CGCG 3 cut(s) 581, 839, 1076
BstV1I GCAGC 5 cut(s) 106, 370, 730, 1055, 1070
BstV2I GAAGAC 2 cut(s) 142, 874
BstX2I RGATCY 1 cut(s) 26
BstYI RGATCY 1 cut(s) 26
BtgI CCRYGG 1 cut(s) 1074
BtgZI GCGATG 2 cut(s) 83, 157
BtsCI GGATG 2 cut(s) 249, 804
BtsIMutI CAGTG 1 cut(s) 622
Cac8I GCNNGC 2 cut(s) 517, 644
CfoI GCGC 3 cut(s) 565, 583, 1048
Cfr13I GGNCC 3 cut(s) 494, 594, 875
Cfr42I CCGCGG 1 cut(s) 1077
CseI GACGC 1 cut(s) 816
Csp6I GTAC 1 cut(s) 1015
CviAII CATG 5 cut(s) 130, 346, 379, 928, 1082
CviQI GTAC 1 cut(s) 1015
DdeI CTNAG 4 cut(s) 392, 442, 559, 765
DpnI GATC 5 cut(s) 28, 737, 926, 989, 1064
DpnII GATC 5 cut(s) 26, 735, 924, 987, 1062
DraIII CACNNNGTG 1 cut(s) 109
Eam1104I CTCTTC 3 cut(s) 393, 415, 1023
EarI CTCTTC 3 cut(s) 393, 415, 1023
EciI GGCGGA 2 cut(s) 20, 541
Eco130I CCWWGG 2 cut(s) 292, 598
Eco31I GGTCTC 1 cut(s) 217
Eco47I GGWCC 3 cut(s) 494, 594, 875
Eco47III AGCGCT 1 cut(s) 1047
Eco57I CTGAAG 1 cut(s) 38
Eco72I CACGTG 1 cut(s) 106
Eco88I CYCGRG 1 cut(s) 114
EcoT14I CCWWGG 2 cut(s) 292, 598
ErhI CCWWGG 2 cut(s) 292, 598
Esp3I CGTCTC 1 cut(s) 417
FaeI CATG 5 cut(s) 133, 349, 382, 931, 1085
FaqI GGGAC 2 cut(s) 324, 1011
FatI CATG 5 cut(s) 129, 345, 378, 927, 1081
FauI CCCGC 3 cut(s) 370, 959, 988
FbaI TGATCA 2 cut(s) 735, 987
Fnu4HI GCNGC 7 cut(s) 120, 384, 566, 579, 744, 1044, 1059
FokI GGATG 2 cut(s) 236, 791
Fsp4HI GCNGC 7 cut(s) 120, 384, 566, 579, 744, 1044, 1059
FspBI CTAG 2 cut(s) 516, 569
GlaI GCGC 3 cut(s) 564, 582, 1047
GluI GCNGC 7 cut(s) 120, 384, 566, 579, 744, 1044, 1059
HaeII RGCGCY 2 cut(s) 566, 1049
HapII CCGG 7 cut(s) 44, 96, 465, 512, 662, 786, 816
HgaI GACGC 1 cut(s) 816
HhaI GCGC 3 cut(s) 565, 583, 1048
Hin1II CATG 5 cut(s) 133, 349, 382, 931, 1085
Hin6I GCGC 3 cut(s) 563, 581, 1046
HinP1I GCGC 3 cut(s) 563, 581, 1046
HincII GTYRAC 1 cut(s) 1155
HindII GTYRAC 1 cut(s) 1155
HindIII AAGCTT 1 cut(s) 50
HinfI GANTC 7 cut(s) 99, 135, 720, 761, 819, 834, 910
HpaII CCGG 7 cut(s) 44, 96, 465, 512, 662, 786, 816
HphI GGTGA 4 cut(s) 318, 472, 532, 793
Hpy166II GTNNAC 3 cut(s) 895, 1097, 1155
Hpy188I TCNGA 4 cut(s) 24, 719, 852, 909
Hpy188III TCNNGA 6 cut(s) 44, 114, 394, 733, 831, 985
Hpy8I GTNNAC 3 cut(s) 895, 1097, 1155
HpyAV CCTTC 4 cut(s) 200, 205, 211, 1048
HpyCH4III ACNGT 3 cut(s) 428, 626, 1019
HpyCH4IV ACGT 4 cut(s) 77, 105, 698, 1093
HpyCH4V TGCA 5 cut(s) 82, 349, 606, 1043, 1097
HpyF10VI GCNNNNNNNGC 4 cut(s) 79, 560, 929, 938
HpyF3I CTNAG 4 cut(s) 392, 442, 559, 765
HpySE526I ACGT 4 cut(s) 77, 105, 698, 1093
Hsp92II CATG 5 cut(s) 133, 349, 382, 931, 1085
HspAI GCGC 3 cut(s) 563, 581, 1046
Kpn2I TCCGGA 1 cut(s) 43
Ksp22I TGATCA 2 cut(s) 735, 987
KspI CCGCGG 1 cut(s) 1077
Kzo9I GATC 5 cut(s) 26, 735, 924, 987, 1062
LguI GCTCTTC 1 cut(s) 393
LmnI GCTCC 5 cut(s) 467, 664, 793, 977, 1078
Lsp1109I GCAGC 5 cut(s) 106, 370, 730, 1055, 1070
LweI GCATC 2 cut(s) 60, 615
MaeI CTAG 2 cut(s) 516, 569
MaeII ACGT 4 cut(s) 77, 105, 698, 1093
MaeIII GTNAC 4 cut(s) 89, 164, 620, 694
MalI GATC 5 cut(s) 28, 737, 926, 989, 1064
MbiI CCGCTC 1 cut(s) 980
MboI GATC 5 cut(s) 26, 735, 924, 987, 1062
MboII GAAGA 9 cut(s) 142, 176, 250, 380, 432, 706, 874, 962, 1040
MflI RGATCY 1 cut(s) 26
MhlI GDGCHC 1 cut(s) 1099
MluCI AATT 3 cut(s) 83, 953, 1037
MlyI GAGTC 1 cut(s) 904
MmeI TCCRAC 1 cut(s) 521
MnlI CCTC 8 cut(s) 352, 494, 533, 678, 818, 863, 1026, 1081
MroI TCCGGA 1 cut(s) 43
MseI TTAA 2 cut(s) 126, 669
MslI CAYNNNNRTG 1 cut(s) 68
MspA1I CMGCKG 1 cut(s) 1076
MspCI CTTAAG 1 cut(s) 668
MspI CCGG 7 cut(s) 44, 96, 465, 512, 662, 786, 816
MvnI CGCG 3 cut(s) 581, 839, 1076
MwoI GCNNNNNNNGC 4 cut(s) 79, 560, 929, 938
NdeII GATC 5 cut(s) 26, 735, 924, 987, 1062
NheI GCTAGC 1 cut(s) 515
NlaIII CATG 5 cut(s) 133, 349, 382, 931, 1085
NlaIV GGNNCC 2 cut(s) 596, 876
NmuCI GTSAC 1 cut(s) 620
PaeR7I CTCGAG 1 cut(s) 114
PciSI GCTCTTC 1 cut(s) 393
PcsI WCGNNNNNNNCGW 2 cut(s) 819, 1023
PfeI GAWTC 6 cut(s) 99, 135, 720, 761, 819, 834
PkrI GCNGC 7 cut(s) 121, 385, 567, 580, 745, 1045, 1060
PleI GAGTC 1 cut(s) 904
PmaCI CACGTG 1 cut(s) 106
PmlI CACGTG 1 cut(s) 106
PpsI GAGTC 1 cut(s) 904
Ppu21I YACGTR 1 cut(s) 106
PshAI GACNNNNGTC 1 cut(s) 914
PspCI CACGTG 1 cut(s) 106
PspN4I GGNNCC 2 cut(s) 596, 876
PspPI GGNCC 3 cut(s) 494, 594, 875
PsuI RGATCY 1 cut(s) 26
RsaI GTAC 1 cut(s) 1016
RsaNI GTAC 1 cut(s) 1015
RseI CAYNNNNRTG 1 cut(s) 68
SacII CCGCGG 1 cut(s) 1077
SapI GCTCTTC 1 cut(s) 393
SaqAI TTAA 2 cut(s) 126, 669
SatI GCNGC 7 cut(s) 120, 384, 566, 579, 744, 1044, 1059
Sau3AI GATC 5 cut(s) 26, 735, 924, 987, 1062
Sau96I GGNCC 3 cut(s) 494, 594, 875
SchI GAGTC 1 cut(s) 904
SduI GDGCHC 1 cut(s) 1099
SfaNI GCATC 2 cut(s) 60, 615
Sfr274I CTCGAG 1 cut(s) 114
Sfr303I CCGCGG 1 cut(s) 1077
SgrBI CCGCGG 1 cut(s) 1077
SinI GGWCC 3 cut(s) 494, 594, 875
SlaI CTCGAG 1 cut(s) 114
SmiMI CAYNNNNRTG 1 cut(s) 68
SmlI CTYRAG 3 cut(s) 114, 668, 1049
SmoI CTYRAG 3 cut(s) 114, 668, 1049
Sse9I AATT 3 cut(s) 83, 953, 1037
SspMI CTAG 2 cut(s) 516, 569
StyI CCWWGG 2 cut(s) 292, 598
TaaI ACNGT 3 cut(s) 428, 626, 1019
TaiI ACGT 4 cut(s) 80, 108, 701, 1096
TaqI TCGA 1 cut(s) 115
TaqII GACCGA 1 cut(s) 608
TasI AATT 3 cut(s) 83, 953, 1037
TauI GCSGC 2 cut(s) 568, 581
TfiI GAWTC 6 cut(s) 99, 135, 720, 761, 819, 834
Tru1I TTAA 2 cut(s) 126, 669
Tru9I TTAA 2 cut(s) 126, 669
TscAI CASTG 1 cut(s) 629
TseFI GTSAC 1 cut(s) 620
TseI GCWGC 5 cut(s) 119, 383, 743, 1043, 1058
Tsp45I GTSAC 1 cut(s) 620
TspGWI ACGGA 1 cut(s) 463
TspRI CASTG 1 cut(s) 629
Vha464I CTTAAG 1 cut(s) 668
VneI GTGCAC 1 cut(s) 1095
VpaK11BI GGWCC 3 cut(s) 494, 594, 875
XapI RAATTY 2 cut(s) 953, 1037
XhoI CTCGAG 1 cut(s) 114
XspI CTAG 2 cut(s) 516, 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.