FvH4_2g38920

WAT1-related protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
28057943 .. 28061021
3079 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g38920.t2

Sequence Viewer

Length: 1203 bp
ATGGCCGAACCAGGTGGCTCTGATAAAAGGATGTGGTGCTCGGTGCCTGAGAAGTTTCAGCTTCATGGAGCCATGCTGGCCTTGCAGTTCGGCTACGCCGGTTTCCATGTCGTCTCTAGATTTGCTCTCAATATGGGCATTTCTAAGCTTGTCTTTCCGGTTTACCGGAACATCATCGCTTTGCTTCTCCTCCTTCCCTTTGCCTATTTTCTGGAAAAGAAGGACAGGCCTCCGATCAATCTCAACTTTCTTGTTCAGTTCTTTTGCCTTGCGCTTATCGGAATAACAGCAAACCAAGGATTCTACTTGCTGGGATTAGACAACACATCACCCACCTTTGCTTCCGCTATACAGAACTCCGTGCCAGCCATTACCTTTCTCATGGCAGCCGTACTCAGAATCGAAAAGGTACGACTAAACCGCAAGGACGGTATTGCAAAGGTTGCCGGAACTATTTTCTGTGTGGCCGGAGCATCAGTGATAACTCTATACAAAGGTCCAACCATATACAGCCCAACAAAACCACTGCAAACGATGATGATGAGCACTGCCTTACCATCTATGTCCATGTCGAGTTTTACTACTAACGCCATGTCAGTGCTTGGCGATGCAAAGGGTAAGAGCTGGACTCTAGGCTGCCTCTACCTGATCGGCCATTGCCTATCGTGGTCCGCCTGGCTCGTCCTGCAAGCGCCAGTTCTCAAGAAGTACCCGGCCCGGCTTTCCGTCACCTCCTACACCTGTTTCTTTGGTCTCATTCAGTTCATCATTATCGCTGCTATTTTCGAAAGAGACGCTCAGGCTTGGATCTTCCACAGTGGCGGAGAAGCCTTCAGCATCTTATATGCGGGAGTGGTTGCATCAGGGATCGCATTCGCTGTACAGATATGGTGCATCGACAGAGGGGGCCCTGTTTTTGTAGCTGTATATCAACCTGTTCAGACTCTCGTTGTCGCTATAATGGCCTCCGTCGCTTTAGGCGAGGAGTTCTACTTGGGAGGGATCATCGGAGCGGTGCTGATCATAGTGGGACTATATGCGGTGTTGTGGGGTAAAAGCGAAGAAAGGAAGTTTGCTGCGGCCAGCTTAAGAGTTCCAATCCAGTCGACTCCTAGTGATAATGTGCACTCAAACAACAGGAAAAGCCAAACCAAGACGTCCCTCACCCAACCACTCATTCCTCCATCCACCGAAAATGTCTGA

Protein Analysis

401

Amino Acids

43.49

Weight (kDa)

9.38

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 25 - 162 6.5e-14 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011466)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1160
AccB1I GGYRCC 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 1013
AccI GTMKAC 1 cut(s) 1106
AciI CCGC 8 cut(s) 345, 421, 672, 822, 848, 1013, 1040, 1079
AclWI GGATC 3 cut(s) 815, 875, 1010
AcoI YGGCCR 4 cut(s) 3, 465, 652, 1080
AcuI CTGAAG 1 cut(s) 817
AcyI GRCGYC 1 cut(s) 1157
AfaI GTAC 4 cut(s) 393, 411, 710, 882
AflII CTTAAG 1 cut(s) 1087
AjnI CCWGG 2 cut(s) 10, 674
AjuI GAANNNNNNNTTGG 2 cut(s) 1161, 1193
AluBI AGCT 5 cut(s) 61, 148, 624, 923, 1086
AluI AGCT 5 cut(s) 61, 148, 624, 923, 1086
Alw21I GWGCWC 3 cut(s) 41, 548, 1128
Alw26I GTCTC 3 cut(s) 118, 758, 786
Alw44I GTGCAC 1 cut(s) 1124
AlwI GGATC 3 cut(s) 815, 875, 1010
AoxI GGCC 9 cut(s) 3, 78, 227, 465, 652, 714, 907, 963, 1080
ApaI GGGCCC 1 cut(s) 911
ApaLI GTGCAC 1 cut(s) 1124
ApeKI GCWGC 4 cut(s) 386, 636, 776, 1076
AspLEI GCGC 2 cut(s) 274, 694
AspS9I GGNCC 5 cut(s) 497, 669, 715, 907, 908
AsuC2I CCSGG 2 cut(s) 713, 718
AsuHPI GGTGA 3 cut(s) 321, 721, 1156
AsuII TTCGAA 1 cut(s) 786
AvaII GGWCC 2 cut(s) 497, 669
BaeGI GKGCMC 2 cut(s) 911, 1128
BanI GGYRCC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 911
Bbv12I GWGCWC 3 cut(s) 41, 548, 1128
BbvI GCAGC 4 cut(s) 398, 623, 763, 1063
BccI CCATC 2 cut(s) 565, 1192
BceAI ACGGC 1 cut(s) 374
BciT130I CCWGG 2 cut(s) 12, 676
BclI TGATCA 1 cut(s) 1020
BcnI CCSGG 2 cut(s) 713, 718
BcoDI GTCTC 3 cut(s) 118, 758, 786
BfaI CTAG 3 cut(s) 117, 632, 1113
BfoI RGCGCY 1 cut(s) 695
BfrI CTTAAG 1 cut(s) 1087
BglI GCCNNNNNGGC 1 cut(s) 77
BisI GCNGC 5 cut(s) 387, 637, 777, 1077, 1080
BlsI GCNGC 5 cut(s) 388, 638, 778, 1078, 1081
Bme1390I CCNGG 4 cut(s) 12, 676, 713, 718
Bme18I GGWCC 2 cut(s) 497, 669
BmgT120I GGNCC 5 cut(s) 497, 669, 715, 907, 908
BmiI GGNNCC 4 cut(s) 45, 70, 908, 909
BmrFI CCNGG 4 cut(s) 12, 676, 713, 718
BmsI GCATC 5 cut(s) 482, 598, 846, 869, 903
BplI GAGNNNNNCTC 2 cut(s) 613, 645
Bpu10I CCTNAGC 1 cut(s) 798
Bpu14I TTCGAA 1 cut(s) 786
BpuEI CTTGAG 1 cut(s) 686
BpuMI CCSGG 2 cut(s) 713, 718
BsaHI GRCGYC 1 cut(s) 1157
BsaI GGTCTC 1 cut(s) 758
BsaJI CCNNGG 1 cut(s) 295
BsaWI WCCGGW 2 cut(s) 157, 165
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bse118I RCCGGY 1 cut(s) 98
Bse1I ACTGG 2 cut(s) 695, 1102
Bse3DI GCAATG 1 cut(s) 655
BseBI CCWGG 2 cut(s) 12, 676
BseDI CCNNGG 1 cut(s) 295
BseGI GGATG 2 cut(s) 36, 1184
BseMI GCAATG 1 cut(s) 655
BseMII CTCAG 3 cut(s) 39, 409, 812
BseNI ACTGG 2 cut(s) 695, 1102
BseRI GAGGAG 2 cut(s) 179, 998
BseSI GKGCMC 2 cut(s) 911, 1128
BseXI GCAGC 4 cut(s) 398, 623, 763, 1063
BseYI CCCAGC 1 cut(s) 310
BshFI GGCC 9 cut(s) 5, 80, 229, 467, 654, 716, 909, 965, 1082
BshNI GGYRCC 1 cut(s) 43
BsiHKAI GWGCWC 3 cut(s) 41, 548, 1128
BsiSI CCGG 7 cut(s) 99, 158, 166, 447, 468, 713, 718
BslFI GGGAC 2 cut(s) 1044, 1144
BsmAI GTCTC 3 cut(s) 118, 758, 786
BsmBI CGTCTC 2 cut(s) 118, 786
BsmFI GGGAC 2 cut(s) 1044, 1144
BsmI GAATGC 1 cut(s) 872
BsnI GGCC 9 cut(s) 5, 80, 229, 467, 654, 716, 909, 965, 1082
Bso31I GGTCTC 1 cut(s) 758
Bsp119I TTCGAA 1 cut(s) 786
Bsp120I GGGCCC 1 cut(s) 907
Bsp1286I GDGCHC 4 cut(s) 41, 548, 911, 1128
Bsp1407I TGTACA 1 cut(s) 880
Bsp143I GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
BspACI CCGC 8 cut(s) 345, 421, 672, 822, 848, 1013, 1040, 1079
BspANI GGCC 9 cut(s) 5, 80, 229, 467, 654, 716, 909, 965, 1082
BspCNI CTCAG 3 cut(s) 40, 408, 811
BspLI GGNNCC 4 cut(s) 45, 70, 908, 909
BspPI GGATC 3 cut(s) 815, 875, 1010
BspT104I TTCGAA 1 cut(s) 786
BspT107I GGYRCC 1 cut(s) 43
BspTI CTTAAG 1 cut(s) 1087
BspTNI GGTCTC 1 cut(s) 758
BsrBI CCGCTC 1 cut(s) 1013
BsrDI GCAATG 1 cut(s) 655
BsrFI RCCGGY 1 cut(s) 98
BsrGI TGTACA 1 cut(s) 880
BsrI ACTGG 2 cut(s) 695, 1102
BssAI RCCGGY 1 cut(s) 98
BssECI CCNNGG 1 cut(s) 295
BssMI GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
BssNI GRCGYC 1 cut(s) 1157
BssT1I CCWWGG 1 cut(s) 295
Bst2UI CCWGG 2 cut(s) 12, 676
Bst4CI ACNGT 2 cut(s) 431, 818
BstACI GRCGYC 1 cut(s) 1157
BstAFI CTTAAG 1 cut(s) 1087
BstAPI GCANNNNNTGC 1 cut(s) 443
BstAUI TGTACA 1 cut(s) 880
BstBI TTCGAA 1 cut(s) 786
BstC8I GCNNGC 4 cut(s) 78, 366, 690, 1084
BstDEI CTNAG 4 cut(s) 48, 144, 395, 798
BstF5I GGATG 2 cut(s) 36, 1184
BstH2I RGCGCY 1 cut(s) 695
BstHHI GCGC 2 cut(s) 274, 694
BstKTI GATC 6 cut(s) 237, 651, 810, 870, 1005, 1023
BstMAI GTCTC 3 cut(s) 118, 758, 786
BstMBI GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
BstMWI GCNNNNNNNGC 6 cut(s) 77, 82, 443, 685, 962, 971
BstNI CCWGG 2 cut(s) 12, 676
BstSCI CCNGG 4 cut(s) 10, 674, 711, 716
BstSLI GKGCMC 2 cut(s) 911, 1128
BstV1I GCAGC 4 cut(s) 398, 623, 763, 1063
BstX2I RGATCY 1 cut(s) 807
BstYI RGATCY 1 cut(s) 807
BsuRI GGCC 9 cut(s) 5, 80, 229, 467, 654, 716, 909, 965, 1082
BtgZI GCGATG 2 cut(s) 160, 621
BtsCI GGATG 2 cut(s) 36, 1184
BtsI GCAGTG 2 cut(s) 524, 546
BtsIMutI CAGTG 5 cut(s) 483, 524, 546, 603, 823
Cac8I GCNNGC 4 cut(s) 78, 366, 690, 1084
CfoI GCGC 2 cut(s) 274, 694
Cfr10I RCCGGY 1 cut(s) 98
Cfr13I GGNCC 5 cut(s) 497, 669, 715, 907, 908
CseI GACGC 1 cut(s) 803
CsiI ACCWGGT 1 cut(s) 10
Csp6I GTAC 4 cut(s) 392, 410, 709, 881
CviAII CATG 6 cut(s) 65, 73, 107, 382, 568, 592
CviQI GTAC 4 cut(s) 392, 410, 709, 881
DdeI CTNAG 4 cut(s) 48, 144, 395, 798
DpnI GATC 6 cut(s) 236, 650, 809, 869, 1004, 1022
DpnII GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
EaeI YGGCCR 4 cut(s) 3, 465, 652, 1080
EciI GGCGGA 2 cut(s) 661, 837
Eco130I CCWWGG 1 cut(s) 295
Eco147I AGGCCT 1 cut(s) 229
Eco24I GRGCYC 1 cut(s) 911
Eco31I GGTCTC 1 cut(s) 758
Eco47I GGWCC 2 cut(s) 497, 669
Eco57I CTGAAG 1 cut(s) 817
EcoO109I RGGNCCY 2 cut(s) 907, 908
EcoRII CCWGG 2 cut(s) 10, 674
EcoT14I CCWWGG 1 cut(s) 295
EcoT38I GRGCYC 1 cut(s) 911
ErhI CCWWGG 1 cut(s) 295
Esp3I CGTCTC 2 cut(s) 118, 786
FaeI CATG 6 cut(s) 68, 76, 110, 385, 571, 595
FalI AAGNNNNNCTT 2 cut(s) 137, 169
FaqI GGGAC 2 cut(s) 1044, 1144
FatI CATG 6 cut(s) 64, 72, 106, 381, 567, 591
FauI CCCGC 1 cut(s) 841
FbaI TGATCA 1 cut(s) 1020
FblI GTMKAC 1 cut(s) 1106
Fnu4HI GCNGC 5 cut(s) 387, 637, 777, 1077, 1080
FokI GGATG 2 cut(s) 43, 1171
FriOI GRGCYC 1 cut(s) 911
Fsp4HI GCNGC 5 cut(s) 387, 637, 777, 1077, 1080
FspBI CTAG 3 cut(s) 117, 632, 1113
GlaI GCGC 2 cut(s) 273, 693
GluI GCNGC 5 cut(s) 387, 637, 777, 1077, 1080
GsaI CCCAGC 1 cut(s) 314
HaeII RGCGCY 1 cut(s) 695
HaeIII GGCC 9 cut(s) 5, 80, 229, 467, 654, 716, 909, 965, 1082
HapII CCGG 7 cut(s) 99, 158, 166, 447, 468, 713, 718
HgaI GACGC 1 cut(s) 803
HhaI GCGC 2 cut(s) 274, 694
Hin1I GRCGYC 1 cut(s) 1157
Hin1II CATG 6 cut(s) 68, 76, 110, 385, 571, 595
Hin6I GCGC 2 cut(s) 272, 692
HinP1I GCGC 2 cut(s) 272, 692
HincII GTYRAC 1 cut(s) 1107
HindII GTYRAC 1 cut(s) 1107
HindIII AAGCTT 1 cut(s) 146
HinfI GANTC 5 cut(s) 300, 399, 628, 943, 1108
HpaII CCGG 7 cut(s) 99, 158, 166, 447, 468, 713, 718
HphI GGTGA 3 cut(s) 321, 721, 1156
Hpy166II GTNNAC 3 cut(s) 163, 1107, 1126
Hpy188I TCNGA 7 cut(s) 22, 234, 281, 398, 942, 1010, 1202
Hpy188III TCNNGA 3 cut(s) 117, 212, 703
Hpy8I GTNNAC 3 cut(s) 163, 1107, 1126
Hpy99I CGWCG 1 cut(s) 974
HpyAV CCTTC 3 cut(s) 203, 214, 841
HpyCH4III ACNGT 2 cut(s) 431, 818
HpyCH4IV ACGT 1 cut(s) 1157
HpyCH4V TGCA 8 cut(s) 85, 437, 529, 611, 688, 860, 894, 1126
HpyF10VI GCNNNNNNNGC 6 cut(s) 77, 82, 443, 685, 962, 971
HpyF3I CTNAG 4 cut(s) 48, 144, 395, 798
HpySE526I ACGT 1 cut(s) 1157
Hsp92I GRCGYC 1 cut(s) 1157
Hsp92II CATG 6 cut(s) 68, 76, 110, 385, 571, 595
HspAI GCGC 2 cut(s) 272, 692
Ksp22I TGATCA 1 cut(s) 1020
Kzo9I GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
LmnI GCTCC 3 cut(s) 68, 470, 1010
Lsp1109I GCAGC 4 cut(s) 398, 623, 763, 1063
LweI GCATC 5 cut(s) 482, 598, 846, 869, 903
MabI ACCWGGT 1 cut(s) 10
MaeI CTAG 3 cut(s) 117, 632, 1113
MaeII ACGT 1 cut(s) 1157
MaeIII GTNAC 1 cut(s) 727
MalI GATC 6 cut(s) 236, 650, 809, 869, 1004, 1022
MbiI CCGCTC 1 cut(s) 1013
MboI GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
MboII GAAGA 2 cut(s) 802, 1073
MflI RGATCY 1 cut(s) 807
MhlI GDGCHC 4 cut(s) 41, 548, 911, 1128
MlyI GAGTC 3 cut(s) 622, 937, 1102
MmeI TCCRAC 1 cut(s) 524
MseI TTAA 1 cut(s) 1088
MslI CAYNNNNRTG 1 cut(s) 596
MspCI CTTAAG 1 cut(s) 1087
MspI CCGG 7 cut(s) 99, 158, 166, 447, 468, 713, 718
MspR9I CCNGG 4 cut(s) 12, 676, 713, 718
Mva1269I GAATGC 1 cut(s) 872
MvaI CCWGG 2 cut(s) 12, 676
MwoI GCNNNNNNNGC 6 cut(s) 77, 82, 443, 685, 962, 971
NciI CCSGG 2 cut(s) 713, 718
NdeII GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
NlaIII CATG 6 cut(s) 68, 76, 110, 385, 571, 595
NlaIV GGNNCC 4 cut(s) 45, 70, 908, 909
NmuCI GTSAC 1 cut(s) 727
NspV TTCGAA 1 cut(s) 786
PceI AGGCCT 1 cut(s) 229
PcsI WCGNNNNNNNCGW 1 cut(s) 978
PctI GAATGC 1 cut(s) 872
PfeI GAWTC 2 cut(s) 300, 399
PkrI GCNGC 5 cut(s) 388, 638, 778, 1078, 1081
PleI GAGTC 3 cut(s) 622, 937, 1102
PpsI GAGTC 3 cut(s) 622, 937, 1102
Psp6I CCWGG 2 cut(s) 10, 674
PspFI CCCAGC 1 cut(s) 310
PspGI CCWGG 2 cut(s) 10, 674
PspN4I GGNNCC 4 cut(s) 45, 70, 908, 909
PspOMI GGGCCC 1 cut(s) 907
PspPI GGNCC 5 cut(s) 497, 669, 715, 907, 908
PsuI RGATCY 1 cut(s) 807
RsaI GTAC 4 cut(s) 393, 411, 710, 882
RsaNI GTAC 4 cut(s) 392, 410, 709, 881
RseI CAYNNNNRTG 1 cut(s) 596
SalI GTCGAC 1 cut(s) 1105
SaqAI TTAA 1 cut(s) 1088
SatI GCNGC 5 cut(s) 387, 637, 777, 1077, 1080
Sau3AI GATC 6 cut(s) 234, 648, 807, 867, 1002, 1020
Sau96I GGNCC 5 cut(s) 497, 669, 715, 907, 908
SchI GAGTC 3 cut(s) 622, 937, 1102
ScrFI CCNGG 4 cut(s) 12, 676, 713, 718
SduI GDGCHC 4 cut(s) 41, 548, 911, 1128
SexAI ACCWGGT 1 cut(s) 10
SfaNI GCATC 5 cut(s) 482, 598, 846, 869, 903
SfuI TTCGAA 1 cut(s) 786
SinI GGWCC 2 cut(s) 497, 669
SmiMI CAYNNNNRTG 1 cut(s) 596
SmlI CTYRAG 2 cut(s) 701, 1087
SmoI CTYRAG 2 cut(s) 701, 1087
SseBI AGGCCT 1 cut(s) 229
SsiI CCGC 8 cut(s) 345, 421, 672, 822, 848, 1013, 1040, 1079
SspMI CTAG 3 cut(s) 117, 632, 1113
StuI AGGCCT 1 cut(s) 229
StyD4I CCNGG 4 cut(s) 10, 674, 711, 716
StyI CCWWGG 1 cut(s) 295
TaaI ACNGT 2 cut(s) 431, 818
TaiI ACGT 1 cut(s) 1160
TaqI TCGA 5 cut(s) 402, 572, 786, 897, 1106
TatI WGTACW 1 cut(s) 880
TauI GCSGC 1 cut(s) 1082
TfiI GAWTC 2 cut(s) 300, 399
Tru1I TTAA 1 cut(s) 1088
Tru9I TTAA 1 cut(s) 1088
TscAI CASTG 5 cut(s) 483, 531, 553, 603, 823
TseFI GTSAC 1 cut(s) 727
TseI GCWGC 4 cut(s) 386, 636, 776, 1076
Tsp45I GTSAC 1 cut(s) 727
TspDTI ATGAA 2 cut(s) 53, 754
TspGWI ACGGA 3 cut(s) 349, 715, 958
TspRI CASTG 5 cut(s) 483, 531, 553, 603, 823
Vha464I CTTAAG 1 cut(s) 1087
VneI GTGCAC 1 cut(s) 1124
VpaK11BI GGWCC 2 cut(s) 497, 669
XbaI TCTAGA 1 cut(s) 116
XmiI GTMKAC 1 cut(s) 1106
XspI CTAG 3 cut(s) 117, 632, 1113
ZraI GACGTC 1 cut(s) 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.