MD15G1019700.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
1148234 .. 1151845
3612 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1019700.v1.1.491

Sequence Viewer

Length: 1221 bp
ATGGCGGACGCAGCAGGTTCGGCCTCTGCAAAGAGAATGTGTTCGGTGCCTGAGAGGCTCCAACTGCATGGTGCCATGCTGGCCTTGCAGTTTGGCTATGCAGGTTTTCATGTCGTCTCAAGAGCTGCCCTAAACATGGGCATTAGCAAGCTCGTTTTCCCAGTTTACAGAAACATCATAGCTCTTCTCCTCCTCCTTCCCTTTGCCTATTTTCTAGAGAAGAAGGACAGACCTGCAATCACTCTAAACTTTCTCATCCAGTTCTTCCTCCTTGCGCTTGTTGGAATTACAGCAAACCAAGGATTCTACTTGCTGGGGTTAGACAACACATCACCCACCTTTGCTTCTGCAATCCAAAACTCCGTCCCTGCCATTACCTTCCTCATGGCAGCCATACTCCGGATAGAGCACGTAAGACTGAACCGAAAAGATGGTATTGCCAAGGTGCTCGGAACGGTCTTCTGCGTCGCCGGAGCGTCTGTAATCACGCTCTACAAGGGCCCCACCATATACAGTCCAACTCCTCCACTCCAGATGATGAGATTGATGAGCAGTACTACTACCTCTGCAATCTCATCAACATCTTCGTCAGCAATAGTGTCGACTCTCTCATCGCTTGGCGATGCAAAGGGGAAGAGCTGGACTCTGGGCTGCCTCTACCTGATCGGACACTGCCTGTCGTGGTCCGGTTGGCTCGTGTTGCAGGCGCCGGTTCTGAAGAAGTACCCGGCCAGGCTCTCAGTGACATCGTACACGTGTTTCTTTGGGCTGATACAGTTCATCATAATTGCTGCAGTTTTTGAGAGAGACGGTCAGGCTTGGATCTTTCACAACGGTGGTGAAGTCTTCAGCATTCTCTACGCGGGAGTGGTTGCATCAGGGATCGCATTCGCTGTACAGATATGGTGCATCGACAGAGGGGGCCCTGTCTTCGTGGCCGTATATCAACCTGTTCAGACCCTCGTTGTCGCTATAATGGCCTCCGTCGCTTTGGGAGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGTGCTGATCATAGTGGGACTATACCTTGTGCTGTGGGGTAAAAACGAAGAAAGAAAGTTCGCTCAACTAATTACTCAAGCAAGCGGCAGGGTTGGAAGCCAGTCCACTCCAGAGCACACAAACAACAGGAAAATCCAAACCAAAGCGTCCCTCACTCAGCCACTCATCCCTCCATCCACCGAAAATGTTTGA

Protein Analysis

407

Amino Acids

43.78

Weight (kDa)

9.48

Isoelectric Point (pI)

34.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 26 - 163 2.6e-13 EamA-like transporter family
EamA PF00892 216 - 354 7.2e-17 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011466)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 5, 92, 241
AccB1I GGYRCC 3 cut(s) 46, 71, 706
AccI GTMKAC 1 cut(s) 602
AccII CGCG 1 cut(s) 863
AccIII TCCGGA 1 cut(s) 399
AciI CCGC 4 cut(s) 5, 863, 1014, 1113
AclWI GGATC 3 cut(s) 830, 890, 1025
AcoI YGGCCR 2 cut(s) 729, 936
AcuI CTGAAG 2 cut(s) 737, 832
AcvI CACGTG 1 cut(s) 756
AcyI GRCGYC 1 cut(s) 707
AfaI GTAC 4 cut(s) 556, 725, 752, 897
AfiI CCNNNNNNNGG 2 cut(s) 136, 399
AflIII ACRYGT 2 cut(s) 753, 755
AjnI CCWGG 1 cut(s) 731
AleI CACNNNNGTG 1 cut(s) 834
AluBI AGCT 4 cut(s) 125, 151, 182, 639
AluI AGCT 4 cut(s) 125, 151, 182, 639
Alw21I GWGCWC 3 cut(s) 411, 450, 1146
Alw26I GTCTC 2 cut(s) 121, 801
AlwI GGATC 3 cut(s) 830, 890, 1025
Aor13HI TCCGGA 1 cut(s) 399
AoxI GGCC 7 cut(s) 21, 81, 499, 729, 922, 936, 978
ApaI GGGCCC 2 cut(s) 503, 926
ApeKI GCWGC 5 cut(s) 11, 125, 389, 651, 791
Asp700I GAANNNNTTC 1 cut(s) 40
AspLEI GCGC 2 cut(s) 277, 709
AspS9I GGNCC 5 cut(s) 499, 500, 684, 922, 923
AsuC2I CCSGG 1 cut(s) 728
AsuHPI GGTGA 2 cut(s) 324, 851
AvaII GGWCC 1 cut(s) 684
BaeGI GKGCMC 2 cut(s) 503, 926
BanI GGYRCC 3 cut(s) 46, 71, 706
BanII GRGCYC 2 cut(s) 503, 926
BauI CACGAG 1 cut(s) 695
BbrPI CACGTG 1 cut(s) 756
BbsI GAAGAC 3 cut(s) 451, 838, 922
Bbv12I GWGCWC 3 cut(s) 411, 450, 1146
BbvI GCAGC 5 cut(s) 23, 112, 401, 638, 778
BccI CCATC 2 cut(s) 425, 1210
BceAI ACGGC 1 cut(s) 923
BcgI CGANNNNNNTGC 3 cut(s) 34, 582, 616
BciT130I CCWGG 1 cut(s) 733
BclI TGATCA 1 cut(s) 1035
BcnI CCSGG 1 cut(s) 728
BcoDI GTCTC 2 cut(s) 121, 801
BfaI CTAG 1 cut(s) 215
BfmI CTRYAG 1 cut(s) 792
BfoI RGCGCY 1 cut(s) 710
BfuAI ACCTGC 3 cut(s) 5, 92, 241
BglI GCCNNNNNGGC 2 cut(s) 55, 80
BisI GCNGC 6 cut(s) 12, 126, 390, 652, 792, 1114
BlsI GCNGC 6 cut(s) 13, 127, 391, 653, 793, 1115
BmcAI AGTACT 1 cut(s) 556
Bme1390I CCNGG 2 cut(s) 728, 733
Bme18I GGWCC 1 cut(s) 684
BmgT120I GGNCC 5 cut(s) 499, 500, 684, 922, 923
BmiI GGNNCC 8 cut(s) 48, 59, 73, 501, 502, 708, 923, 924
BmrFI CCNGG 2 cut(s) 728, 733
BmrI ACTGGG 1 cut(s) 155
BmsI GCATC 3 cut(s) 613, 884, 918
BmuI ACTGGG 1 cut(s) 155
BpiI GAAGAC 3 cut(s) 451, 838, 922
BplI GAGNNNNNCTC 2 cut(s) 628, 660
BpmI CTGGAG 2 cut(s) 515, 1122
BpuEI CTTGAG 2 cut(s) 103, 1089
BpuMI CCSGG 1 cut(s) 728
BsaAI YACGTR 2 cut(s) 412, 756
BsaHI GRCGYC 1 cut(s) 707
BsaJI CCNNGG 2 cut(s) 298, 441
BsaWI WCCGGW 2 cut(s) 399, 686
BsaXI ACNNNNNCTCC 2 cut(s) 465, 495
Bsc4I CCNNNNNNNGG 2 cut(s) 136, 399
Bse118I RCCGGY 1 cut(s) 709
Bse1I ACTGG 3 cut(s) 161, 259, 1129
BseAI TCCGGA 1 cut(s) 399
BseBI CCWGG 1 cut(s) 733
BseDI CCNNGG 2 cut(s) 298, 441
BseGI GGATG 3 cut(s) 255, 1194, 1202
BseLI CCNNNNNNNGG 2 cut(s) 136, 399
BseMII CTCAG 3 cut(s) 42, 753, 1199
BseNI ACTGG 3 cut(s) 161, 259, 1129
BseRI GAGGAG 3 cut(s) 179, 182, 513
BseSI GKGCMC 2 cut(s) 503, 926
BseXI GCAGC 5 cut(s) 23, 112, 401, 638, 778
BseYI CCCAGC 1 cut(s) 313
Bsh1236I CGCG 1 cut(s) 863
BshFI GGCC 7 cut(s) 23, 83, 501, 731, 924, 938, 980
BshNI GGYRCC 3 cut(s) 46, 71, 706
BsiHKAI GWGCWC 3 cut(s) 411, 450, 1146
BsiSI CCGG 5 cut(s) 400, 471, 687, 710, 728
BslFI GGGAC 3 cut(s) 350, 1059, 1162
BslI CCNNNNNNNGG 2 cut(s) 136, 399
BsmAI GTCTC 2 cut(s) 121, 801
BsmBI CGTCTC 2 cut(s) 121, 801
BsmFI GGGAC 3 cut(s) 350, 1059, 1162
BsmI GAATGC 2 cut(s) 852, 887
BsnI GGCC 7 cut(s) 23, 83, 501, 731, 924, 938, 980
Bsp120I GGGCCC 2 cut(s) 499, 922
Bsp1286I GDGCHC 5 cut(s) 411, 450, 503, 926, 1146
Bsp13I TCCGGA 1 cut(s) 399
Bsp1407I TGTACA 1 cut(s) 895
Bsp143I GATC 5 cut(s) 663, 822, 882, 1017, 1035
BspACI CCGC 4 cut(s) 5, 863, 1014, 1113
BspANI GGCC 7 cut(s) 23, 83, 501, 731, 924, 938, 980
BspCNI CTCAG 3 cut(s) 43, 752, 1198
BspEI TCCGGA 1 cut(s) 399
BspFNI CGCG 1 cut(s) 863
BspLI GGNNCC 8 cut(s) 48, 59, 73, 501, 502, 708, 923, 924
BspMAI CTGCAG 1 cut(s) 796
BspMI ACCTGC 3 cut(s) 5, 92, 241
BspPI GGATC 3 cut(s) 830, 890, 1025
BspQI GCTCTTC 2 cut(s) 189, 629
BspT107I GGYRCC 3 cut(s) 46, 71, 706
BsrFI RCCGGY 1 cut(s) 709
BsrGI TGTACA 1 cut(s) 895
BsrI ACTGG 3 cut(s) 161, 259, 1129
BssAI RCCGGY 1 cut(s) 709
BssECI CCNNGG 2 cut(s) 298, 441
BssMI GATC 5 cut(s) 663, 822, 882, 1017, 1035
BssNI GRCGYC 1 cut(s) 707
BssSI CACGAG 1 cut(s) 695
BssT1I CCWWGG 2 cut(s) 298, 441
Bst2BI CACGAG 1 cut(s) 695
Bst2UI CCWGG 1 cut(s) 733
Bst4CI ACNGT 5 cut(s) 457, 515, 777, 812, 836
Bst6I CTCTTC 3 cut(s) 189, 629, 993
BstACI GRCGYC 1 cut(s) 707
BstAUI TGTACA 1 cut(s) 895
BstBAI YACGTR 2 cut(s) 412, 756
BstC8I GCNNGC 4 cut(s) 81, 149, 705, 1111
BstDEI CTNAG 3 cut(s) 51, 739, 1185
BstF5I GGATG 3 cut(s) 255, 1194, 1202
BstFNI CGCG 1 cut(s) 863
BstH2I RGCGCY 1 cut(s) 710
BstHHI GCGC 2 cut(s) 277, 709
BstKTI GATC 5 cut(s) 666, 825, 885, 1020, 1038
BstMAI GTCTC 2 cut(s) 121, 801
BstMBI GATC 5 cut(s) 663, 822, 882, 1017, 1035
BstMWI GCNNNNNNNGC 9 cut(s) 11, 20, 55, 64, 80, 85, 700, 977, 986
BstNI CCWGG 1 cut(s) 733
BstSCI CCNGG 2 cut(s) 726, 731
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 2 cut(s) 503, 926
BstUI CGCG 1 cut(s) 863
BstV1I GCAGC 5 cut(s) 23, 112, 401, 638, 778
BstV2I GAAGAC 3 cut(s) 451, 838, 922
BstX2I RGATCY 1 cut(s) 822
BstXI CCANNNNNNTGG 1 cut(s) 68
BstYI RGATCY 1 cut(s) 822
BsuRI GGCC 7 cut(s) 23, 83, 501, 731, 924, 938, 980
BtgZI GCGATG 2 cut(s) 597, 636
BtsCI GGATG 3 cut(s) 255, 1194, 1202
BtsI GCAGTG 2 cut(s) 670, 1035
BtsIMutI CAGTG 3 cut(s) 670, 747, 1035
BveI ACCTGC 3 cut(s) 5, 92, 241
Cac8I GCNNGC 4 cut(s) 81, 149, 705, 1111
CfoI GCGC 2 cut(s) 277, 709
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 5 cut(s) 499, 500, 684, 922, 923
CseI GACGC 4 cut(s) 17, 454, 465, 1164
Csp6I GTAC 4 cut(s) 555, 724, 751, 896
CviAII CATG 5 cut(s) 68, 76, 110, 136, 385
CviQI GTAC 4 cut(s) 555, 724, 751, 896
DdeI CTNAG 3 cut(s) 51, 739, 1185
DinI GGCGCC 1 cut(s) 708
DpnI GATC 5 cut(s) 665, 824, 884, 1019, 1037
DpnII GATC 5 cut(s) 663, 822, 882, 1017, 1035
EaeI YGGCCR 2 cut(s) 729, 936
Eam1104I CTCTTC 3 cut(s) 189, 629, 993
EarI CTCTTC 3 cut(s) 189, 629, 993
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 298, 441
Eco24I GRGCYC 2 cut(s) 503, 926
Eco47I GGWCC 1 cut(s) 684
Eco57I CTGAAG 2 cut(s) 737, 832
Eco72I CACGTG 1 cut(s) 756
EcoO109I RGGNCCY 4 cut(s) 499, 500, 922, 923
EcoRII CCWGG 1 cut(s) 731
EcoT14I CCWWGG 2 cut(s) 298, 441
EcoT38I GRGCYC 2 cut(s) 503, 926
EgeI GGCGCC 1 cut(s) 708
EheI GGCGCC 1 cut(s) 708
ErhI CCWWGG 2 cut(s) 298, 441
Esp3I CGTCTC 2 cut(s) 121, 801
FaeI CATG 5 cut(s) 71, 79, 113, 139, 388
FaqI GGGAC 3 cut(s) 350, 1059, 1162
FatI CATG 5 cut(s) 67, 75, 109, 135, 384
FauI CCCGC 2 cut(s) 856, 1007
FbaI TGATCA 1 cut(s) 1035
FblI GTMKAC 1 cut(s) 602
Fnu4HI GCNGC 6 cut(s) 12, 126, 390, 652, 792, 1114
FokI GGATG 3 cut(s) 242, 1181, 1189
FriOI GRGCYC 2 cut(s) 503, 926
Fsp4HI GCNGC 6 cut(s) 12, 126, 390, 652, 792, 1114
FspBI CTAG 1 cut(s) 215
GlaI GCGC 2 cut(s) 276, 708
GluI GCNGC 6 cut(s) 12, 126, 390, 652, 792, 1114
GsaI CCCAGC 1 cut(s) 317
GsuI CTGGAG 2 cut(s) 515, 1122
HaeII RGCGCY 1 cut(s) 710
HaeIII GGCC 7 cut(s) 23, 83, 501, 731, 924, 938, 980
HapII CCGG 5 cut(s) 400, 471, 687, 710, 728
HgaI GACGC 4 cut(s) 17, 454, 465, 1164
HhaI GCGC 2 cut(s) 277, 709
Hin1I GRCGYC 1 cut(s) 707
Hin1II CATG 5 cut(s) 71, 79, 113, 139, 388
Hin6I GCGC 2 cut(s) 275, 707
HinP1I GCGC 2 cut(s) 275, 707
HincII GTYRAC 1 cut(s) 603
HindII GTYRAC 1 cut(s) 603
HinfI GANTC 3 cut(s) 303, 604, 643
HpaII CCGG 5 cut(s) 400, 471, 687, 710, 728
HphI GGTGA 2 cut(s) 324, 851
Hpy166II GTNNAC 4 cut(s) 166, 603, 753, 1134
Hpy188I TCNGA 4 cut(s) 452, 668, 717, 957
Hpy188III TCNNGA 5 cut(s) 120, 215, 400, 532, 1139
Hpy8I GTNNAC 4 cut(s) 166, 603, 753, 1134
Hpy99I CGWCG 2 cut(s) 470, 989
HpyAV CCTTC 3 cut(s) 206, 217, 388
HpyCH4III ACNGT 5 cut(s) 457, 515, 777, 812, 836
HpyCH4IV ACGT 2 cut(s) 411, 755
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 20, 55, 64, 80, 85, 700, 977, 986
HpyF3I CTNAG 3 cut(s) 51, 739, 1185
HpySE526I ACGT 2 cut(s) 411, 755
Hsp92I GRCGYC 1 cut(s) 707
Hsp92II CATG 5 cut(s) 71, 79, 113, 139, 388
HspAI GCGC 2 cut(s) 275, 707
KasI GGCGCC 1 cut(s) 706
Kpn2I TCCGGA 1 cut(s) 399
Ksp22I TGATCA 1 cut(s) 1035
Kzo9I GATC 5 cut(s) 663, 822, 882, 1017, 1035
LguI GCTCTTC 2 cut(s) 189, 629
LmnI GCTCC 2 cut(s) 63, 473
Lsp1109I GCAGC 5 cut(s) 23, 112, 401, 638, 778
LweI GCATC 3 cut(s) 613, 884, 918
MaeI CTAG 1 cut(s) 215
MaeII ACGT 2 cut(s) 411, 755
MaeIII GTNAC 1 cut(s) 742
MalI GATC 5 cut(s) 665, 824, 884, 1019, 1037
MboI GATC 5 cut(s) 663, 822, 882, 1017, 1035
MflI RGATCY 1 cut(s) 822
MhlI GDGCHC 5 cut(s) 411, 450, 503, 926, 1146
MluCI AATT 3 cut(s) 285, 786, 1098
Mly113I GGCGCC 1 cut(s) 707
MlyI GAGTC 2 cut(s) 598, 637
MmeI TCCRAC 4 cut(s) 85, 262, 542, 1102
MroI TCCGGA 1 cut(s) 399
MroXI GAANNNNTTC 1 cut(s) 40
MslI CAYNNNNRTG 1 cut(s) 834
MspI CCGG 5 cut(s) 400, 471, 687, 710, 728
MspR9I CCNGG 2 cut(s) 728, 733
Mva1269I GAATGC 2 cut(s) 852, 887
MvaI CCWGG 1 cut(s) 733
MvnI CGCG 1 cut(s) 863
MwoI GCNNNNNNNGC 9 cut(s) 11, 20, 55, 64, 80, 85, 700, 977, 986
NarI GGCGCC 1 cut(s) 707
NciI CCSGG 1 cut(s) 728
NdeII GATC 5 cut(s) 663, 822, 882, 1017, 1035
NlaIII CATG 5 cut(s) 71, 79, 113, 139, 388
NlaIV GGNNCC 8 cut(s) 48, 59, 73, 501, 502, 708, 923, 924
NmuCI GTSAC 1 cut(s) 742
OliI CACNNNNGTG 1 cut(s) 834
PciSI GCTCTTC 2 cut(s) 189, 629
PctI GAATGC 2 cut(s) 852, 887
PdmI GAANNNNTTC 1 cut(s) 40
PfeI GAWTC 1 cut(s) 303
PkrI GCNGC 6 cut(s) 13, 127, 391, 653, 793, 1115
PleI GAGTC 2 cut(s) 598, 637
PluTI GGCGCC 1 cut(s) 710
PmaCI CACGTG 1 cut(s) 756
PmlI CACGTG 1 cut(s) 756
PpsI GAGTC 2 cut(s) 598, 637
Ppu21I YACGTR 2 cut(s) 412, 756
Psp6I CCWGG 1 cut(s) 731
PspCI CACGTG 1 cut(s) 756
PspFI CCCAGC 1 cut(s) 313
PspGI CCWGG 1 cut(s) 731
PspN4I GGNNCC 8 cut(s) 48, 59, 73, 501, 502, 708, 923, 924
PspOMI GGGCCC 2 cut(s) 499, 922
PspPI GGNCC 5 cut(s) 499, 500, 684, 922, 923
PstI CTGCAG 1 cut(s) 796
PsuI RGATCY 1 cut(s) 822
RsaI GTAC 4 cut(s) 556, 725, 752, 897
RsaNI GTAC 4 cut(s) 555, 724, 751, 896
RseI CAYNNNNRTG 1 cut(s) 834
SalI GTCGAC 1 cut(s) 601
SapI GCTCTTC 2 cut(s) 189, 629
SatI GCNGC 6 cut(s) 12, 126, 390, 652, 792, 1114
Sau3AI GATC 5 cut(s) 663, 822, 882, 1017, 1035
Sau96I GGNCC 5 cut(s) 499, 500, 684, 922, 923
ScaI AGTACT 1 cut(s) 556
SchI GAGTC 2 cut(s) 598, 637
ScrFI CCNGG 2 cut(s) 728, 733
SduI GDGCHC 5 cut(s) 411, 450, 503, 926, 1146
SfaNI GCATC 3 cut(s) 613, 884, 918
SfcI CTRYAG 1 cut(s) 792
SfoI GGCGCC 1 cut(s) 708
SinI GGWCC 1 cut(s) 684
SmiMI CAYNNNNRTG 1 cut(s) 834
SmlI CTYRAG 2 cut(s) 118, 1104
SmoI CTYRAG 2 cut(s) 118, 1104
Sse9I AATT 3 cut(s) 285, 786, 1098
SsiI CCGC 4 cut(s) 5, 863, 1014, 1113
SspDI GGCGCC 1 cut(s) 706
SspMI CTAG 1 cut(s) 215
StyD4I CCNGG 2 cut(s) 726, 731
StyI CCWWGG 2 cut(s) 298, 441
TaaI ACNGT 5 cut(s) 457, 515, 777, 812, 836
TaiI ACGT 2 cut(s) 414, 758
TaqI TCGA 2 cut(s) 602, 912
TasI AATT 3 cut(s) 285, 786, 1098
TatI WGTACW 2 cut(s) 554, 895
TauI GCSGC 1 cut(s) 1116
TfiI GAWTC 1 cut(s) 303
TscAI CASTG 3 cut(s) 677, 747, 1035
TseFI GTSAC 1 cut(s) 742
TseI GCWGC 5 cut(s) 11, 125, 389, 651, 791
Tsp45I GTSAC 1 cut(s) 742
TspDTI ATGAA 2 cut(s) 98, 769
TspGWI ACGGA 2 cut(s) 352, 973
TspRI CASTG 3 cut(s) 677, 747, 1035
VpaK11BI GGWCC 1 cut(s) 684
XbaI TCTAGA 1 cut(s) 214
XmiI GTMKAC 1 cut(s) 602
XmnI GAANNNNTTC 1 cut(s) 40
XspI CTAG 1 cut(s) 215
ZrmI AGTACT 1 cut(s) 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.