AT2G05940

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
2287238 .. 2289636
2399 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G05940.1

Sequence Viewer

Length: 1389 bp
ATGGCGGTGAAGAAGAAAGTTTCATGGAGATCACTAATCGTTGGATGTTTAGGAGATCCAGAAACCCTAATGGCATCTTCAAAGAAACCTAAAAGAAAAAATGACGTCATCAAGAAACAGAGCTCTTTTCAAAGACTATCGATACTTGATATGAGCAATCCAAGTTCCAACACTTTGTCAGAAGATCTATCGATTTCTTTGGCCGGATCAGATCTTCATGTGTTTACCCTAGCGGAGCTTAAAGTCATTACACAAAGCTTTTCATCGACCAATTTTCTAGGTGAAGGTGGGTTTGGTCCTGTTCATAAGGGTTTCATTGATGATAAGCTACGTCCTGGTCTTAAAGCTCAGCCTGTTGCTGTTAAATTGCTTGATCTTGAAGGTCTTCAAGGTCACCGTGAATGGCTGACGGAAGTTATGTTTTTGGGACAATTGAAGCACAAAAATTTGGTGAAATTGATTGGTTATTGTTGTGAGGAAGAACATAGAACTCTTGTTTATGAGTTCATGCCTCGTGGAAGCTTAGAGAATCAACTTTTCAGAAGATACTCTGCCTCGCTTCCATGGTCAACAAGAATGAAGATCGCTCATGGAGCTGCAACAGGACTTCAATTTCTACACGAAGCTGAAAATCCTGTTATCTATCGGGATTTCAAAGCCTCCAATATCTTGTTAGATTCCGATTACACGGCGAAACTCTCTGACTTCGGGTTAGCCAAAGACGGACCAGAAGGAGACGACACTCATGTGTCAACTCGAGTGATGGGCACACAAGGCTACGCAGCTCCTGAATACATCATGACCGGTCATTTAACAGCAAGAAGTGACGTATACAGCTTTGGAGTTGTGTTGCTAGAGCTTTTGACCGGACGGAGATCAGTAGACAAAAAGAGATCATCGAGGGAACAAAACCTTGTGGACTGGGCTCGTCCAATGCTCAATGACCCACGTAAACTATCTCGAATCATGGACCCGAGACTTGAAGGTCAGTACTCAGAGACAGGAGCAAGAAAAGCAGCAACATTGGCTTACCAATGCTTAAGCCATCGACCCAAGAACCGGCCATGTATGAGTGCCGTCGTCTCTATACTCAATGATCTTAAAGACTATAATGATATTCCTATGGGGACTTTCACTTACACGGTGCCAAACACTCCGGACAATAAAGAAGATGATGGTCGTGTTGGTAATAAGCCACGTAAGAGTAGTCATCATCATCATCATCAACAACAACAAAGTAATCATCCCCGGTCGTCTCCATCTCCGACAACCAAGTCTCCATCTCCCACGGCCAAGTCGCCGAGGAATTCAACGGAAAATCACCGGAGAACGTTGAGAAATGGAGTGAATTCGCCGTTGAGAAGTGAGGCAGGTGGGGAACGGTACTAA

Protein Analysis

462

Amino Acids

51.7

Weight (kDa)

9.47

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 89 - 361 2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 91 - 363 1.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011722)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1361
AasI GACNNNNNNGTC 2 cut(s) 984, 1273
AatII GACGTC 1 cut(s) 108
Acc36I ACCTGC 1 cut(s) 1361
AccB1I GGYRCC 1 cut(s) 1144
AccI GTMKAC 2 cut(s) 831, 882
AccIII TCCGGA 1 cut(s) 1156
AciI CCGC 2 cut(s) 5, 233
AclI AACGTT 1 cut(s) 1331
AclWI GGATC 2 cut(s) 50, 214
AcoI YGGCCR 3 cut(s) 201, 1061, 1290
AcsI RAATTY 3 cut(s) 445, 1306, 1348
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 2 cut(s) 992, 1385
AfiI CCNNNNNNNGG 1 cut(s) 1059
AflII CTTAAG 1 cut(s) 1039
AgeI ACCGGT 1 cut(s) 803
AgsI TTSAA 9 cut(s) 81, 131, 380, 389, 436, 611, 655, 983, 1311
AjnI CCWGG 1 cut(s) 334
AjuI GAANNNNNNNTTGG 2 cut(s) 276, 308
AleI CACNNNNGTG 1 cut(s) 746
Alw21I GWGCWC 1 cut(s) 125
Alw26I GTCTC 6 cut(s) 729, 970, 992, 1087, 1260, 1281
AlwI GGATC 2 cut(s) 50, 214
AlwNI CAGNNNCTG 1 cut(s) 788
Ama87I CYCGRG 2 cut(s) 756, 973
Aor13HI TCCGGA 1 cut(s) 1156
AoxI GGCC 3 cut(s) 201, 1061, 1290
ApeKI GCWGC 3 cut(s) 596, 782, 1016
ApoI RAATTY 3 cut(s) 445, 1306, 1348
AsiGI ACCGGT 1 cut(s) 803
Asp700I GAANNNNTTC 1 cut(s) 384
AspS9I GGNCC 3 cut(s) 296, 725, 970
AsuC2I CCSGG 1 cut(s) 1249
AsuHPI GGTGA 5 cut(s) 19, 293, 386, 463, 1313
AvaI CYCGRG 2 cut(s) 756, 973
AvaII GGWCC 3 cut(s) 296, 725, 970
BaeGI GKGCMC 1 cut(s) 770
BanI GGYRCC 1 cut(s) 1144
BanII GRGCYC 2 cut(s) 125, 928
BauI CACGAG 1 cut(s) 513
BbsI GAAGAC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 125
BbvI GCAGC 3 cut(s) 583, 794, 1028
BccI CCATC 5 cut(s) 757, 1053, 1169, 1267, 1288
BceAI ACGGC 4 cut(s) 705, 1061, 1305, 1339
BciT130I CCWGG 1 cut(s) 336
BcnI CCSGG 1 cut(s) 1249
BcoDI GTCTC 6 cut(s) 729, 970, 992, 1087, 1260, 1281
BfaI CTAG 3 cut(s) 230, 278, 854
BfrI CTTAAG 1 cut(s) 1039
BfuAI ACCTGC 1 cut(s) 1361
BglII AGATCT 2 cut(s) 184, 211
BisI GCNGC 3 cut(s) 597, 783, 1017
BlpI GCTNAGC 1 cut(s) 348
BlsI GCNGC 3 cut(s) 598, 784, 1018
BmcAI AGTACT 1 cut(s) 992
Bme1390I CCNGG 2 cut(s) 336, 1249
Bme18I GGWCC 3 cut(s) 296, 725, 970
BmeT110I CYCGRG 2 cut(s) 756, 973
BmgT120I GGNCC 3 cut(s) 296, 725, 970
BmiI GGNNCC 2 cut(s) 972, 1146
BmrFI CCNGG 2 cut(s) 336, 1249
BmrI ACTGGG 1 cut(s) 931
BmsI GCATC 1 cut(s) 83
BmuI ACTGGG 1 cut(s) 931
BpiI GAAGAC 1 cut(s) 377
Bpu1102I GCTNAGC 1 cut(s) 348
BpuMI CCSGG 1 cut(s) 1249
Bsa29I ATCGAT 2 cut(s) 140, 191
BsaAI YACGTR 2 cut(s) 950, 1199
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 4 cut(s) 563, 1247, 1287, 1301
BsaWI WCCGGW 4 cut(s) 803, 866, 1156, 1323
BsaXI ACNNNNNCTCC 2 cut(s) 1261, 1291
Bsc4I CCNNNNNNNGG 1 cut(s) 1059
Bse118I RCCGGY 2 cut(s) 803, 1059
Bse1I ACTGG 1 cut(s) 926
BseAI TCCGGA 1 cut(s) 1156
BseBI CCWGG 1 cut(s) 336
BseCI ATCGAT 2 cut(s) 140, 191
BseDI CCNNGG 4 cut(s) 563, 1247, 1287, 1301
BseGI GGATG 2 cut(s) 50, 1243
BseLI CCNNNNNNNGG 1 cut(s) 1059
BseMII CTCAG 2 cut(s) 362, 1008
BseNI ACTGG 1 cut(s) 926
BseSI GKGCMC 1 cut(s) 770
BseXI GCAGC 3 cut(s) 583, 794, 1028
Bsh1285I CGRYCG 1 cut(s) 1253
BshFI GGCC 3 cut(s) 203, 1063, 1292
BshNI GGYRCC 1 cut(s) 1144
BshTI ACCGGT 1 cut(s) 803
BshVI ATCGAT 2 cut(s) 140, 191
BsiEI CGRYCG 1 cut(s) 1253
BsiHKAI GWGCWC 1 cut(s) 125
BsiHKCI CYCGRG 2 cut(s) 756, 973
BsiSI CCGG 7 cut(s) 204, 804, 867, 1060, 1157, 1249, 1324
BslFI GGGAC 2 cut(s) 441, 1141
BslI CCNNNNNNNGG 1 cut(s) 1059
BsmAI GTCTC 6 cut(s) 729, 970, 992, 1087, 1260, 1281
BsmBI CGTCTC 3 cut(s) 729, 1087, 1260
BsmFI GGGAC 2 cut(s) 441, 1141
BsnI GGCC 3 cut(s) 203, 1063, 1292
BsoBI CYCGRG 2 cut(s) 756, 973
Bsp1286I GDGCHC 3 cut(s) 125, 770, 928
Bsp13I TCCGGA 1 cut(s) 1156
Bsp1720I GCTNAGC 1 cut(s) 348
Bsp19I CCATGG 1 cut(s) 563
BspACI CCGC 2 cut(s) 5, 233
BspANI GGCC 3 cut(s) 203, 1063, 1292
BspCNI CTCAG 2 cut(s) 361, 1007
BspDI ATCGAT 2 cut(s) 140, 191
BspEI TCCGGA 1 cut(s) 1156
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 2 cut(s) 972, 1146
BspMI ACCTGC 1 cut(s) 1361
BspPI GGATC 2 cut(s) 50, 214
BspT107I GGYRCC 1 cut(s) 1144
BspTI CTTAAG 1 cut(s) 1039
BsrFI RCCGGY 2 cut(s) 803, 1059
BsrI ACTGG 1 cut(s) 926
BssAI RCCGGY 2 cut(s) 803, 1059
BssECI CCNNGG 4 cut(s) 563, 1247, 1287, 1301
BssNAI GTATAC 1 cut(s) 832
BssNI GRCGYC 1 cut(s) 105
BssSI CACGAG 1 cut(s) 513
BssT1I CCWWGG 1 cut(s) 563
Bst1107I GTATAC 1 cut(s) 832
Bst2BI CACGAG 1 cut(s) 513
Bst2UI CCWGG 1 cut(s) 336
Bst4CI ACNGT 3 cut(s) 398, 1144, 1383
BstACI GRCGYC 1 cut(s) 105
BstAFI CTTAAG 1 cut(s) 1039
BstBAI YACGTR 2 cut(s) 950, 1199
BstDEI CTNAG 3 cut(s) 348, 523, 994
BstDSI CCRYGG 2 cut(s) 563, 1287
BstEII GGTNACC 1 cut(s) 392
BstF5I GGATG 2 cut(s) 50, 1243
BstMAI GTCTC 6 cut(s) 729, 970, 992, 1087, 1260, 1281
BstMCI CGRYCG 1 cut(s) 1253
BstMWI GCNNNNNNNGC 4 cut(s) 593, 774, 1013, 1025
BstNI CCWGG 1 cut(s) 336
BstPI GGTNACC 1 cut(s) 392
BstSCI CCNGG 2 cut(s) 334, 1247
BstSLI GKGCMC 1 cut(s) 770
BstV1I GCAGC 3 cut(s) 583, 794, 1028
BstV2I GAAGAC 1 cut(s) 377
BstX2I RGATCY 3 cut(s) 55, 184, 211
BstYI RGATCY 3 cut(s) 55, 184, 211
BstZ17I GTATAC 1 cut(s) 832
Bsu15I ATCGAT 2 cut(s) 140, 191
BsuRI GGCC 3 cut(s) 203, 1063, 1292
BsuTUI ATCGAT 2 cut(s) 140, 191
BtgI CCRYGG 2 cut(s) 563, 1287
BtsCI GGATG 2 cut(s) 50, 1243
BveI ACCTGC 1 cut(s) 1361
CaiI CAGNNNCTG 1 cut(s) 788
CciI TCATGA 1 cut(s) 798
Cfr10I RCCGGY 2 cut(s) 803, 1059
Cfr13I GGNCC 3 cut(s) 296, 725, 970
ClaI ATCGAT 2 cut(s) 140, 191
Csp6I GTAC 2 cut(s) 991, 1384
CspAI ACCGGT 1 cut(s) 803
CviAII CATG 9 cut(s) 24, 218, 508, 564, 590, 746, 799, 967, 1065
CviQI GTAC 2 cut(s) 991, 1384
DdeI CTNAG 3 cut(s) 348, 523, 994
DrdI GACNNNNNNGTC 2 cut(s) 984, 1273
DseDI GACNNNNNNGTC 2 cut(s) 984, 1273
EaeI YGGCCR 3 cut(s) 201, 1061, 1290
Ecl136II GAGCTC 1 cut(s) 123
Eco130I CCWWGG 1 cut(s) 563
Eco24I GRGCYC 2 cut(s) 125, 928
Eco47I GGWCC 3 cut(s) 296, 725, 970
Eco53kI GAGCTC 1 cut(s) 123
Eco88I CYCGRG 2 cut(s) 756, 973
Eco91I GGTNACC 1 cut(s) 392
EcoICRI GAGCTC 1 cut(s) 123
EcoO65I GGTNACC 1 cut(s) 392
EcoRI GAATTC 2 cut(s) 1306, 1348
EcoRII CCWGG 1 cut(s) 334
EcoT14I CCWWGG 1 cut(s) 563
EcoT38I GRGCYC 2 cut(s) 125, 928
ErhI CCWWGG 1 cut(s) 563
Esp3I CGTCTC 3 cut(s) 729, 1087, 1260
FaeI CATG 9 cut(s) 27, 221, 511, 567, 593, 749, 802, 970, 1068
FaqI GGGAC 2 cut(s) 441, 1141
FatI CATG 9 cut(s) 23, 217, 507, 563, 589, 745, 798, 966, 1064
FblI GTMKAC 2 cut(s) 831, 882
Fnu4HI GCNGC 3 cut(s) 597, 783, 1017
FokI GGATG 2 cut(s) 57, 1230
FriOI GRGCYC 2 cut(s) 125, 928
Fsp4HI GCNGC 3 cut(s) 597, 783, 1017
FspBI CTAG 3 cut(s) 230, 278, 854
GluI GCNGC 3 cut(s) 597, 783, 1017
HaeIII GGCC 3 cut(s) 203, 1063, 1292
HapII CCGG 7 cut(s) 204, 804, 867, 1060, 1157, 1249, 1324
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 9 cut(s) 27, 221, 511, 567, 593, 749, 802, 970, 1068
HincII GTYRAC 2 cut(s) 570, 753
HindII GTYRAC 2 cut(s) 570, 753
HindIII AAGCTT 2 cut(s) 256, 520
HinfI GANTC 3 cut(s) 529, 677, 963
HpaII CCGG 7 cut(s) 204, 804, 867, 1060, 1157, 1249, 1324
HphI GGTGA 5 cut(s) 19, 293, 386, 463, 1313
Hpy166II GTNNAC 7 cut(s) 225, 570, 753, 832, 883, 919, 953
Hpy188I TCNGA 7 cut(s) 181, 211, 542, 682, 703, 997, 1266
Hpy188III TCNNGA 8 cut(s) 59, 112, 377, 647, 788, 799, 960, 1157
Hpy8I GTNNAC 7 cut(s) 225, 570, 753, 832, 883, 919, 953
Hpy99I CGWCG 1 cut(s) 1082
HpyAV CCTTC 4 cut(s) 278, 374, 725, 977
HpyCH4III ACNGT 3 cut(s) 398, 1144, 1383
HpyCH4IV ACGT 6 cut(s) 105, 331, 828, 949, 1198, 1331
HpyCH4V TGCA 1 cut(s) 599
HpyF10VI GCNNNNNNNGC 4 cut(s) 593, 774, 1013, 1025
HpyF3I CTNAG 3 cut(s) 348, 523, 994
HpySE526I ACGT 6 cut(s) 105, 331, 828, 949, 1198, 1331
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 9 cut(s) 27, 221, 511, 567, 593, 749, 802, 970, 1068
Kpn2I TCCGGA 1 cut(s) 1156
LmnI GCTCC 4 cut(s) 235, 593, 790, 1004
Lsp1109I GCAGC 3 cut(s) 583, 794, 1028
LweI GCATC 1 cut(s) 83
MaeI CTAG 3 cut(s) 230, 278, 854
MaeII ACGT 6 cut(s) 105, 331, 828, 949, 1198, 1331
MaeIII GTNAC 2 cut(s) 392, 824
MfeI CAATTG 1 cut(s) 431
MflI RGATCY 3 cut(s) 55, 184, 211
MhlI GDGCHC 3 cut(s) 125, 770, 928
MluCI AATT 8 cut(s) 271, 365, 431, 445, 455, 611, 1306, 1348
MmeI TCCRAC 3 cut(s) 22, 192, 1289
MnlI CCTC 7 cut(s) 469, 522, 565, 670, 894, 1296, 1360
MroI TCCGGA 1 cut(s) 1156
MroXI GAANNNNTTC 1 cut(s) 384
MseI TTAA 6 cut(s) 240, 342, 363, 812, 1040, 1101
MslI CAYNNNNRTG 1 cut(s) 746
MspCI CTTAAG 1 cut(s) 1039
MspI CCGG 7 cut(s) 204, 804, 867, 1060, 1157, 1249, 1324
MspR9I CCNGG 2 cut(s) 336, 1249
MunI CAATTG 1 cut(s) 431
MvaI CCWGG 1 cut(s) 336
MwoI GCNNNNNNNGC 4 cut(s) 593, 774, 1013, 1025
NciI CCSGG 1 cut(s) 1249
NcoI CCATGG 1 cut(s) 563
NlaIII CATG 9 cut(s) 27, 221, 511, 567, 593, 749, 802, 970, 1068
NlaIV GGNNCC 2 cut(s) 972, 1146
NmeAIII GCCGAG 1 cut(s) 1326
NmuCI GTSAC 2 cut(s) 392, 824
OliI CACNNNNGTG 1 cut(s) 746
PaeR7I CTCGAG 1 cut(s) 756
PagI TCATGA 1 cut(s) 798
PaqCI CACCTGC 1 cut(s) 1361
PdmI GAANNNNTTC 1 cut(s) 384
PfeI GAWTC 3 cut(s) 529, 677, 963
PinAI ACCGGT 1 cut(s) 803
PkrI GCNGC 3 cut(s) 598, 784, 1018
Ppu21I YACGTR 2 cut(s) 950, 1199
Psp124BI GAGCTC 1 cut(s) 125
Psp1406I AACGTT 1 cut(s) 1331
Psp6I CCWGG 1 cut(s) 334
PspEI GGTNACC 1 cut(s) 392
PspGI CCWGG 1 cut(s) 334
PspN4I GGNNCC 2 cut(s) 972, 1146
PspPI GGNCC 3 cut(s) 296, 725, 970
PspXI VCTCGAGB 1 cut(s) 756
PstNI CAGNNNCTG 1 cut(s) 788
PsuI RGATCY 3 cut(s) 55, 184, 211
RsaI GTAC 2 cut(s) 992, 1385
RsaNI GTAC 2 cut(s) 991, 1384
RseI CAYNNNNRTG 1 cut(s) 746
SacI GAGCTC 1 cut(s) 125
SaqAI TTAA 6 cut(s) 240, 342, 363, 812, 1040, 1101
SatI GCNGC 3 cut(s) 597, 783, 1017
Sau96I GGNCC 3 cut(s) 296, 725, 970
ScaI AGTACT 1 cut(s) 992
ScrFI CCNGG 2 cut(s) 336, 1249
SduI GDGCHC 3 cut(s) 125, 770, 928
SfaNI GCATC 1 cut(s) 83
Sfr274I CTCGAG 1 cut(s) 756
SinI GGWCC 3 cut(s) 296, 725, 970
SlaI CTCGAG 1 cut(s) 756
SmiMI CAYNNNNRTG 1 cut(s) 746
SmlI CTYRAG 2 cut(s) 756, 1039
SmoI CTYRAG 2 cut(s) 756, 1039
Sse9I AATT 8 cut(s) 271, 365, 431, 445, 455, 611, 1306, 1348
SsiI CCGC 2 cut(s) 5, 233
SspMI CTAG 3 cut(s) 230, 278, 854
SstI GAGCTC 1 cut(s) 125
StyD4I CCNGG 2 cut(s) 334, 1247
StyI CCWWGG 1 cut(s) 563
TaaI ACNGT 3 cut(s) 398, 1144, 1383
TaiI ACGT 6 cut(s) 108, 334, 831, 952, 1201, 1334
TaqI TCGA 7 cut(s) 140, 191, 266, 757, 899, 961, 1048
TasI AATT 8 cut(s) 271, 365, 431, 445, 455, 611, 1306, 1348
TatI WGTACW 1 cut(s) 990
TfiI GAWTC 3 cut(s) 529, 677, 963
Tru1I TTAA 6 cut(s) 240, 342, 363, 812, 1040, 1101
Tru9I TTAA 6 cut(s) 240, 342, 363, 812, 1040, 1101
TseFI GTSAC 2 cut(s) 392, 824
TseI GCWGC 3 cut(s) 596, 782, 1016
Tsp45I GTSAC 2 cut(s) 392, 824
TspDTI ATGAA 7 cut(s) 12, 206, 252, 293, 304, 496, 593
TspGWI ACGGA 4 cut(s) 425, 738, 886, 1328
Vha464I CTTAAG 1 cut(s) 1039
VpaK11BI GGWCC 3 cut(s) 296, 725, 970
XapI RAATTY 3 cut(s) 445, 1306, 1348
XhoI CTCGAG 1 cut(s) 756
XmiI GTMKAC 2 cut(s) 831, 882
XmnI GAANNNNTTC 1 cut(s) 384
XspI CTAG 3 cut(s) 230, 278, 854
ZraI GACGTC 1 cut(s) 106
ZrmI AGTACT 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.