FvH4_1g08770

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
4671227 .. 4673523
2297 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08770.t1

Sequence Viewer

Length: 1356 bp
ATGACAGTGAAGAAAATCACATGTTGGTCTGTACTCCCAAGCTGCTACAAATCTGAGTTCCGAGCTCCCCAGAACAAAGCAAAAGTTGTAGCAAAGCAGACCTCATTCCAGAGGCTTTCGCTTTCGGATTTGAGTAATCCCAGCTCGACAACACTTTCAGAGGACCTCTCCATATCTCTTGCAGGCTCCAATCTTCATGTATTCACACTTGGGGAGCTGAAGGTGATCACACAGAGCTTCTCATCCAGCAACTTTATTGGGGAGGGTGGTTTTGGACCGGTTCACAAAGGGTTCATTGATGATAAGCTTAGACCCGGTTTGGCTGCTCAGCCTGTGGCTGTTAAGTTCTTAGACTTGGATGGATCACAGGGACATAGAGAGTGGTTGACTGAGGTTATGTTTCTTGGGCAATTGAGGCATGCACACCTTGTGAAGCTCATAGGGTATTGCTGTGTAGATGAACATAGGCTATTGGTGTATGAATATATGCCAAGAGGCAGCTTAGAGAATCAGCTATTTAGAAGGTATTCAGCATCATTGCCATGGTCAACCAGAATGAAGATTGCTCTTGGAGCTGCAAAGGGTCTTGCTTTCCTACATGAAGCAGAGAAACCAGTTATATACCGCGATTTCAAAGCTTCGAACATCTTGTTAGATTCTGACTATACCCCCAAGCTCTCAGATTTTGGTCTAGCAAAAGATGGCCCAGAAGGAGATGACACACATGTTTCGACACGAGTCATGGGAACACAAGGCTATGCTGCTCCGGAATACATTATGACAGGTCACTTGACGGCGATGAGTGATGTGTATAGCTTCGGAGTGGTACTATTGGAGCTACTAACAGGAAGGAGATCCGTGGATAAGAACCGTCCCCACAGAGAGCAGAACTTAGTAGAATGGGCAAGACCAATGCTGAATGAACCCCGAAAACTCAGCCGGATAATGGATCCTAGACTAGAAGGACAATACTCGGAAATGGGAGCCAGAAAGGCTGCAGCATTGGCTTACCAATGCCTCAGCCACCGGCCTAAACAAAGACCAAAAATGTGTGAGGTGGTCAAGACATTAGAGCCCCTCAAAGATTTTGATGACATTCCCATTGGACCCTTTGTGTACACAGTTCCTACCGATAAATCCGATAATTCGATCAAGGATGTGAAGGAAGGTAATGCACAGTGGGAATCGAAGAAGAAGAGCAGCCATCAGCACCAACACCAGCAGCTCCATGGCCATAGGCATCAGCAGAGGACTCCTCCAAAGTCTCCAAGTTATCACTCGGAAAATTTGGTGCGCCAACGTCGCAGAAGTCTTGATTTGAACTCTCCTTTGCACCAAGTAGTCAAGGGAGTATAG

Protein Analysis

452

Amino Acids

50.86

Weight (kDa)

9.32

Isoelectric Point (pI)

36.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 82 - 355 4.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 84 - 357 9.7e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011722)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 627
AccIII TCCGGA 1 cut(s) 766
AciI CCGC 1 cut(s) 625
AclWI GGATC 4 cut(s) 370, 849, 944, 957
AcoI YGGCCR 1 cut(s) 1231
AcsI RAATTY 1 cut(s) 1285
AcuI CTGAAG 1 cut(s) 239
AdeI CACNNNGTG 1 cut(s) 430
AfaI GTAC 3 cut(s) 33, 828, 1118
AfiI CCNNNNNNNGG 1 cut(s) 946
AflIII ACRYGT 2 cut(s) 20, 724
AgeI ACCGGT 1 cut(s) 277
AgsI TTSAA 2 cut(s) 634, 1321
Alw21I GWGCWC 1 cut(s) 67
Alw26I GTCTC 1 cut(s) 1269
AlwI GGATC 4 cut(s) 370, 849, 944, 957
Aor13HI TCCGGA 1 cut(s) 766
AoxI GGCC 3 cut(s) 703, 1028, 1231
ApeKI GCWGC 9 cut(s) 42, 323, 498, 575, 761, 995, 998, 1200, 1222
ApoI RAATTY 1 cut(s) 1285
AsiGI ACCGGT 1 cut(s) 277
Asp700I GAANNNNTTC 1 cut(s) 526
AspLEI GCGC 1 cut(s) 1296
AspS9I GGNCC 4 cut(s) 163, 275, 704, 1106
AsuC2I CCSGG 1 cut(s) 315
AsuHPI GGTGA 1 cut(s) 235
AsuII TTCGAA 1 cut(s) 641
AvaII GGWCC 3 cut(s) 163, 275, 1106
BalI TGGCCA 1 cut(s) 1233
BamHI GGATCC 1 cut(s) 949
BanII GRGCYC 2 cut(s) 67, 1077
BauI CACGAG 1 cut(s) 735
Bbv12I GWGCWC 1 cut(s) 67
BbvCI CCTCAGC 1 cut(s) 1019
BbvI GCAGC 9 cut(s) 29, 310, 510, 562, 748, 982, 1010, 1212, 1234
BccI CCATC 3 cut(s) 353, 695, 1212
BceAI ACGGC 1 cut(s) 810
BclI TGATCA 1 cut(s) 225
BcnI CCSGG 1 cut(s) 315
BcoDI GTCTC 1 cut(s) 1269
BfaI CTAG 3 cut(s) 692, 954, 959
BfmI CTRYAG 1 cut(s) 996
BglI GCCNNNNNGGC 1 cut(s) 992
BisI GCNGC 9 cut(s) 43, 324, 499, 576, 762, 996, 999, 1201, 1223
BlpI GCTNAGC 1 cut(s) 327
BlsI GCNGC 9 cut(s) 44, 325, 500, 577, 763, 997, 1000, 1202, 1224
Bme1390I CCNGG 1 cut(s) 315
Bme18I GGWCC 3 cut(s) 163, 275, 1106
BmgT120I GGNCC 4 cut(s) 163, 275, 704, 1106
BmiI GGNNCC 4 cut(s) 187, 951, 985, 1108
BmrFI CCNGG 1 cut(s) 315
BmsI GCATC 2 cut(s) 542, 1249
BoxI GACNNNNGTC 1 cut(s) 737
BplI GAGNNNNNCTC 4 cut(s) 152, 184, 1240, 1272
Bpu10I CCTNAGC 1 cut(s) 1019
Bpu1102I GCTNAGC 1 cut(s) 327
Bpu14I TTCGAA 1 cut(s) 641
BpuMI CCSGG 1 cut(s) 315
BsaJI CCNNGG 3 cut(s) 542, 858, 1228
BsaWI WCCGGW 2 cut(s) 277, 766
Bsc4I CCNNNNNNNGG 1 cut(s) 946
Bse118I RCCGGY 2 cut(s) 277, 1026
Bse1I ACTGG 1 cut(s) 614
Bse3DI GCAATG 1 cut(s) 536
BseAI TCCGGA 1 cut(s) 766
BseDI CCNNGG 3 cut(s) 542, 858, 1228
BseGI GGATG 3 cut(s) 242, 364, 1162
BseLI CCNNNNNNNGG 1 cut(s) 946
BseMI GCAATG 1 cut(s) 536
BseMII CTCAG 6 cut(s) 45, 341, 381, 693, 949, 1033
BseNI ACTGG 1 cut(s) 614
BseRI GAGGAG 1 cut(s) 1245
BseXI GCAGC 9 cut(s) 29, 310, 510, 562, 748, 982, 1010, 1212, 1234
BseYI CCCAGC 1 cut(s) 140
Bsh1236I CGCG 1 cut(s) 627
BshFI GGCC 3 cut(s) 705, 1030, 1233
BshTI ACCGGT 1 cut(s) 277
BsiHKAI GWGCWC 1 cut(s) 67
BsiSI CCGG 5 cut(s) 278, 315, 767, 940, 1027
BslFI GGGAC 2 cut(s) 384, 858
BslI CCNNNNNNNGG 1 cut(s) 946
BsmAI GTCTC 1 cut(s) 1269
BsmFI GGGAC 2 cut(s) 384, 858
BsnI GGCC 3 cut(s) 705, 1030, 1233
Bsp119I TTCGAA 1 cut(s) 641
Bsp1286I GDGCHC 2 cut(s) 67, 1077
Bsp13I TCCGGA 1 cut(s) 766
Bsp1407I TGTACA 1 cut(s) 1116
Bsp143I GATC 5 cut(s) 225, 362, 854, 949, 1149
Bsp1720I GCTNAGC 1 cut(s) 327
Bsp19I CCATGG 2 cut(s) 542, 1228
BspACI CCGC 1 cut(s) 625
BspANI GGCC 3 cut(s) 705, 1030, 1233
BspCNI CTCAG 6 cut(s) 46, 340, 382, 692, 948, 1032
BspEI TCCGGA 1 cut(s) 766
BspFNI CGCG 1 cut(s) 627
BspLI GGNNCC 4 cut(s) 187, 951, 985, 1108
BspMAI CTGCAG 1 cut(s) 1000
BspPI GGATC 4 cut(s) 370, 849, 944, 957
BspQI GCTCTTC 1 cut(s) 1190
BspT104I TTCGAA 1 cut(s) 641
BsrDI GCAATG 1 cut(s) 536
BsrFI RCCGGY 2 cut(s) 277, 1026
BsrGI TGTACA 1 cut(s) 1116
BsrI ACTGG 1 cut(s) 614
BssAI RCCGGY 2 cut(s) 277, 1026
BssECI CCNNGG 3 cut(s) 542, 858, 1228
BssMI GATC 5 cut(s) 225, 362, 854, 949, 1149
BssSI CACGAG 1 cut(s) 735
BssT1I CCWWGG 2 cut(s) 542, 1228
Bst2BI CACGAG 1 cut(s) 735
Bst4CI ACNGT 4 cut(s) 7, 872, 1123, 1179
Bst6I CTCTTC 1 cut(s) 1190
BstAUI TGTACA 1 cut(s) 1116
BstBI TTCGAA 1 cut(s) 641
BstC8I GCNNGC 2 cut(s) 184, 420
BstDSI CCRYGG 3 cut(s) 542, 858, 1228
BstF5I GGATG 3 cut(s) 242, 364, 1162
BstFNI CGCG 1 cut(s) 627
BstHHI GCGC 1 cut(s) 1296
BstKTI GATC 5 cut(s) 228, 365, 857, 952, 1152
BstMAI GTCTC 1 cut(s) 1269
BstMBI GATC 5 cut(s) 225, 362, 854, 949, 1149
BstMWI GCNNNNNNNGC 5 cut(s) 415, 572, 992, 1004, 1302
BstNSI RCATGY 3 cut(s) 24, 422, 728
BstPAI GACNNNNGTC 1 cut(s) 737
BstSCI CCNGG 1 cut(s) 313
BstSFI CTRYAG 1 cut(s) 996
BstUI CGCG 1 cut(s) 627
BstV1I GCAGC 9 cut(s) 29, 310, 510, 562, 748, 982, 1010, 1212, 1234
BstX2I RGATCY 2 cut(s) 854, 949
BstYI RGATCY 2 cut(s) 854, 949
BsuRI GGCC 3 cut(s) 705, 1030, 1233
BtgI CCRYGG 3 cut(s) 542, 858, 1228
BtgZI GCGATG 1 cut(s) 812
BtsCI GGATG 3 cut(s) 242, 364, 1162
BtsIMutI CAGTG 2 cut(s) 12, 1184
Cac8I GCNNGC 2 cut(s) 184, 420
CfoI GCGC 1 cut(s) 1296
Cfr10I RCCGGY 2 cut(s) 277, 1026
Cfr13I GGNCC 4 cut(s) 163, 275, 704, 1106
Csp6I GTAC 3 cut(s) 32, 827, 1117
CspAI ACCGGT 1 cut(s) 277
CviAII CATG 8 cut(s) 21, 197, 419, 543, 599, 725, 742, 1229
CviQI GTAC 3 cut(s) 32, 827, 1117
DpnI GATC 5 cut(s) 227, 364, 856, 951, 1151
DpnII GATC 5 cut(s) 225, 362, 854, 949, 1149
DraIII CACNNNGTG 1 cut(s) 430
EaeI YGGCCR 1 cut(s) 1231
Eam1104I CTCTTC 1 cut(s) 1190
EarI CTCTTC 1 cut(s) 1190
Ecl136II GAGCTC 1 cut(s) 65
Eco130I CCWWGG 2 cut(s) 542, 1228
Eco24I GRGCYC 2 cut(s) 67, 1077
Eco47I GGWCC 3 cut(s) 163, 275, 1106
Eco53kI GAGCTC 1 cut(s) 65
Eco57I CTGAAG 1 cut(s) 239
EcoICRI GAGCTC 1 cut(s) 65
EcoO109I RGGNCCY 1 cut(s) 163
EcoT14I CCWWGG 2 cut(s) 542, 1228
EcoT38I GRGCYC 2 cut(s) 67, 1077
ErhI CCWWGG 2 cut(s) 542, 1228
FaeI CATG 8 cut(s) 24, 200, 422, 546, 602, 728, 745, 1232
FaqI GGGAC 2 cut(s) 384, 858
FatI CATG 8 cut(s) 20, 196, 418, 542, 598, 724, 741, 1228
FbaI TGATCA 1 cut(s) 225
Fnu4HI GCNGC 9 cut(s) 43, 324, 499, 576, 762, 996, 999, 1201, 1223
FokI GGATG 3 cut(s) 229, 371, 1169
FriOI GRGCYC 2 cut(s) 67, 1077
Fsp4HI GCNGC 9 cut(s) 43, 324, 499, 576, 762, 996, 999, 1201, 1223
FspBI CTAG 3 cut(s) 692, 954, 959
GlaI GCGC 1 cut(s) 1295
GluI GCNGC 9 cut(s) 43, 324, 499, 576, 762, 996, 999, 1201, 1223
GsaI CCCAGC 1 cut(s) 144
HaeIII GGCC 3 cut(s) 705, 1030, 1233
HapII CCGG 5 cut(s) 278, 315, 767, 940, 1027
HhaI GCGC 1 cut(s) 1296
Hin1II CATG 8 cut(s) 24, 200, 422, 546, 602, 728, 745, 1232
Hin6I GCGC 1 cut(s) 1294
HinP1I GCGC 1 cut(s) 1294
HincII GTYRAC 2 cut(s) 387, 549
HindII GTYRAC 2 cut(s) 387, 549
HindIII AAGCTT 2 cut(s) 305, 636
HinfI GANTC 5 cut(s) 508, 656, 738, 1184, 1252
HpaII CCGG 5 cut(s) 278, 315, 767, 940, 1027
HphI GGTGA 1 cut(s) 235
Hpy166II GTNNAC 5 cut(s) 283, 387, 549, 1117, 1119
Hpy188III TCNNGA 4 cut(s) 109, 767, 1063, 1313
Hpy8I GTNNAC 5 cut(s) 283, 387, 549, 1117, 1119
Hpy99I CGWCG 1 cut(s) 1305
HpyAV CCTTC 7 cut(s) 214, 516, 704, 843, 956, 1156, 1160
HpyCH4III ACNGT 4 cut(s) 7, 872, 1123, 1179
HpyCH4IV ACGT 1 cut(s) 1300
HpyCH4V TGCA 6 cut(s) 182, 422, 578, 998, 1175, 1333
HpyF10VI GCNNNNNNNGC 5 cut(s) 415, 572, 992, 1004, 1302
HpySE526I ACGT 1 cut(s) 1300
Hsp92II CATG 8 cut(s) 24, 200, 422, 546, 602, 728, 745, 1232
HspAI GCGC 1 cut(s) 1294
Kpn2I TCCGGA 1 cut(s) 766
Ksp22I TGATCA 1 cut(s) 225
Kzo9I GATC 5 cut(s) 225, 362, 854, 949, 1149
LguI GCTCTTC 1 cut(s) 1190
LmnI GCTCC 8 cut(s) 70, 191, 214, 572, 769, 835, 983, 1230
Lsp1109I GCAGC 9 cut(s) 29, 310, 510, 562, 748, 982, 1010, 1212, 1234
LweI GCATC 2 cut(s) 542, 1249
MaeI CTAG 3 cut(s) 692, 954, 959
MaeII ACGT 1 cut(s) 1300
MaeIII GTNAC 1 cut(s) 785
MalI GATC 5 cut(s) 227, 364, 856, 951, 1151
MboI GATC 5 cut(s) 225, 362, 854, 949, 1149
MboII GAAGA 6 cut(s) 22, 185, 571, 1201, 1204, 1207
MfeI CAATTG 1 cut(s) 410
MflI RGATCY 2 cut(s) 854, 949
MhlI GDGCHC 2 cut(s) 67, 1077
MlsI TGGCCA 1 cut(s) 1233
MluCI AATT 3 cut(s) 410, 1144, 1285
MluNI TGGCCA 1 cut(s) 1233
MlyI GAGTC 2 cut(s) 747, 1246
Mox20I TGGCCA 1 cut(s) 1233
MroI TCCGGA 1 cut(s) 766
MroXI GAANNNNTTC 1 cut(s) 526
MscI TGGCCA 1 cut(s) 1233
MseI TTAA 1 cut(s) 342
MslI CAYNNNNRTG 1 cut(s) 541
Msp20I TGGCCA 1 cut(s) 1233
MspI CCGG 5 cut(s) 278, 315, 767, 940, 1027
MspR9I CCNGG 1 cut(s) 315
MunI CAATTG 1 cut(s) 410
MvnI CGCG 1 cut(s) 627
MwoI GCNNNNNNNGC 5 cut(s) 415, 572, 992, 1004, 1302
NciI CCSGG 1 cut(s) 315
NcoI CCATGG 2 cut(s) 542, 1228
NdeII GATC 5 cut(s) 225, 362, 854, 949, 1149
NlaIII CATG 8 cut(s) 24, 200, 422, 546, 602, 728, 745, 1232
NlaIV GGNNCC 4 cut(s) 187, 951, 985, 1108
NmuCI GTSAC 1 cut(s) 785
NspI RCATGY 3 cut(s) 24, 422, 728
NspV TTCGAA 1 cut(s) 641
PaeI GCATGC 1 cut(s) 422
PciI ACATGT 2 cut(s) 20, 724
PciSI GCTCTTC 1 cut(s) 1190
PdmI GAANNNNTTC 1 cut(s) 526
PfeI GAWTC 3 cut(s) 508, 656, 1184
PinAI ACCGGT 1 cut(s) 277
PkrI GCNGC 9 cut(s) 44, 325, 500, 577, 763, 997, 1000, 1202, 1224
PleI GAGTC 2 cut(s) 746, 1246
PpsI GAGTC 2 cut(s) 746, 1246
PpuMI RGGWCCY 1 cut(s) 163
PscI ACATGT 2 cut(s) 20, 724
PshAI GACNNNNGTC 1 cut(s) 737
Psp124BI GAGCTC 1 cut(s) 67
Psp5II RGGWCCY 1 cut(s) 163
PspFI CCCAGC 1 cut(s) 140
PspN4I GGNNCC 4 cut(s) 187, 951, 985, 1108
PspPI GGNCC 4 cut(s) 163, 275, 704, 1106
PspPPI RGGWCCY 1 cut(s) 163
PstI CTGCAG 1 cut(s) 1000
PsuI RGATCY 2 cut(s) 854, 949
RsaI GTAC 3 cut(s) 33, 828, 1118
RsaNI GTAC 3 cut(s) 32, 827, 1117
RseI CAYNNNNRTG 1 cut(s) 541
SacI GAGCTC 1 cut(s) 67
SapI GCTCTTC 1 cut(s) 1190
SaqAI TTAA 1 cut(s) 342
SatI GCNGC 9 cut(s) 43, 324, 499, 576, 762, 996, 999, 1201, 1223
Sau3AI GATC 5 cut(s) 225, 362, 854, 949, 1149
Sau96I GGNCC 4 cut(s) 163, 275, 704, 1106
SchI GAGTC 2 cut(s) 747, 1246
ScrFI CCNGG 1 cut(s) 315
SduI GDGCHC 2 cut(s) 67, 1077
SfaNI GCATC 2 cut(s) 542, 1249
SfcI CTRYAG 1 cut(s) 996
SfuI TTCGAA 1 cut(s) 641
SinI GGWCC 3 cut(s) 163, 275, 1106
SmiMI CAYNNNNRTG 1 cut(s) 541
SphI GCATGC 1 cut(s) 422
Sse9I AATT 3 cut(s) 410, 1144, 1285
SsiI CCGC 1 cut(s) 625
SspMI CTAG 3 cut(s) 692, 954, 959
SstI GAGCTC 1 cut(s) 67
StyD4I CCNGG 1 cut(s) 313
StyI CCWWGG 2 cut(s) 542, 1228
TaaI ACNGT 4 cut(s) 7, 872, 1123, 1179
TaiI ACGT 1 cut(s) 1303
TaqI TCGA 5 cut(s) 146, 641, 731, 1148, 1187
TasI AATT 3 cut(s) 410, 1144, 1285
TatI WGTACW 2 cut(s) 31, 1116
TfiI GAWTC 3 cut(s) 508, 656, 1184
Tru1I TTAA 1 cut(s) 342
Tru9I TTAA 1 cut(s) 342
TscAI CASTG 2 cut(s) 12, 1184
TseFI GTSAC 1 cut(s) 785
TseI GCWGC 9 cut(s) 42, 323, 498, 575, 761, 995, 998, 1200, 1222
Tsp45I GTSAC 1 cut(s) 785
TspDTI ATGAA 7 cut(s) 185, 283, 474, 495, 572, 615, 936
TspGWI ACGGA 1 cut(s) 847
TspRI CASTG 2 cut(s) 12, 1184
VpaK11BI GGWCC 3 cut(s) 163, 275, 1106
XapI RAATTY 1 cut(s) 1285
XceI RCATGY 3 cut(s) 24, 422, 728
XcmI CCANNNNNNNNNTGG 1 cut(s) 1226
XmnI GAANNNNTTC 1 cut(s) 526
XspI CTAG 3 cut(s) 692, 954, 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.