Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0017951

Physical Location & Seq

Genomic Coordinates Forward (+)

5677908 .. 5680801

Gene Structure 2894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G13620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGCGACAAGTGAAGAACCTAGTACGGATGCCTCCATAATATGTTATGCGCCAAGCATGATCACCACCAATGGTGTTTGGCAAGGCGATAATCCTCTCGACTTTTCGCTACCTCTCTTTGTTCTTCAGCTAACTTTGGTTGTTGTCGTCACTCGTTTCTTCGTCTTTATCCTCAAACCCTTTCGCCAACCTCGTGTCATCTCCGAGATCCTTGGCGGAATTGTTCTTGGACCATCGGTGCTAGGGCGCTCCACAAAATTTGCACACACTATTTTCCCTCAAAGAAGTGTGATGGTACTTGAAACAATGGCTAATGTGGGTTTACTTTACTTCCTATTCTTGGTGGGTGTAGAGATGGACATTATGGTTGTACGTAAGACAGGGAAGCGAGCCCTAACCATCGCTATTGGTGGTATGGTTTTACCATTCCTCATTGGTGCTGCCTTCTCTTTCTCTATGCATAGATCAGAAGACCACTTAGGGCAAGGCACCTATATACTTTTCCTTGGTGTTGCACTCTCCGTTACTGCATTCCCGGTTCTTGCAAGAATTCTTGCTGAGCTCAAGCTCATCAATACCGAGATTGGGCGGATATCGATGTCTGCAGCTTTAGTTAACGACATGTTCGCTTGGATTCTTTTGGCCTTAGCTATTGCATTGGCTGAGAGTGACAAAACTTCATTTGCCTCTCTTTGGGTTATGATCTCTAGTGCAGTTTTCATTGCCGTTTGTGTTTTTGTTGTGAGACCAGGCATTGCTTGGATCATACGTAAAACCCCTGAAGGAGAGAATTTCAGTGAGTTCCACATATGCCTAATCTTGACAGGAGTTATGATCTCCGGTTTCATTACTGATGCAATCGGAACACATTCAGTCTTTGGTGCTTTTGTGTTTGGTCTTGTGATTCCCAATGGACCTCTTGGTCTAACCCTCATTGAGAAGCTTGAAGATTTCGTCTCTGGCCTTCTCCTACCTCTCTTCTTTGCCATAAGTGGTCTCAAGACTAATATAGCTGCCATTCAAGGCCCTGCCACGTGGTTAACTCTGTTTCTTGTCATTTTCCTCGCTTGTGCTGGAAAGGTCATCGGTACAGTTATTGTTGCGTTTTTCCATGGAATGCCAGTTCGTGAAGGAATCACTCTTGGACTACTCTTGAACACTAAAGGTCTTGTTGAAATGATTGTACTTAATGTTGGAAAAGACCAAAAGGTTTTGGATGATGAGACATTTGCTACTATGGTACTTGTGGCCTTGGTTATGACTGGAGTCATTACTCCTATTGTAACAATCCTTTACAAGCCAGTGAAGAAATCTGTTTCATACAAGAGACGAACAATCCAACAAACGAAGCCAGACAGCGAGCTTCGGGTATTGGTTTGCGTTCACACACCGCGTAATGTTCCTACTATAATTAACCTTCTTGAAGCTTCACATCCCACAAAGAGATCTCCTATATGCATCTACGTTCTCCACCTTGTTGAGCTCACGGGCCGCGCATCCGCGATGTTGATTGTCCACAACACTCGTAAGTCAGGACGACCCGCGCTTAACAGAACTCAAGCTCAATCAGATCATATCATCAACGCCTTTGAGAACTATGAACAACACGCTGCCTTTGTCGCTGTACAACCTTTAACAGCTATTTCACCTTACTCAACAATGCATGAAGATGTTTGTAGCTTAGCAGAGGACAAACGTGTCTCCTTCATAATCATACCATTTCACAAACAACAAACAGTTGATGGAGGAATGGAATCAACCAACCCGGCCTACCGTTTAGTCAACCAAAACCTACTCGAAAACTCGCCTTGTTCGGTCGGAATACTCGTGGATAGAGGACTCAATGGAGCGACAAGACTCAACTCAAACACTGTTTCTCTTCAAGTTGCTGTTCTGTTTTTCGGCGGTCCAGACGATAGAGAAGCTTTGGCTTATGCATGGAGAATGGCTCAACATCCTGGCATCACTCTAACTGTTTTACGGTTCATTCATGATGAAGATGAAGCAGACACAGCTTCAACACGAGCGACCAATGACAGTGACCTAAAGATACCAAAGATGGACCATAGAAAACAAAGACAACTTGATGATGACTACATTAATCTCTTTAGGGCAGAAAATGCGGAATACGAGTCAATTGTGTATATAGAAAAACTAGTGAGCAATGGGGAAGAGACTGTTGCAGCAGTGAGATCAATGGACAGTTCTCATGATTTGTTTATAGTTGGAAGAGGAGAAGGAATGTCGTCTCCTCTTACCGCGGGTTTAACTGATTGGAGTGAGTGTCCTGAGCTTGGTGCCATTGGAGATTTGCTTGCTTCATCAGACTTTGCAGCTACTGTGTCGGTTCTTGTGGTTCAACAGTATGTTGGGTCATGGGCACAAGAAGATGATATGGATTTTCCTGAGAGTCCAGTACATTCACATGAAACAAAAGTCACATATGGTTTAGAGAATCCACGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

821

Amino Acids

89.86

Weight (kDa)

5.71

Isoelectric Point (pI)

35.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	51 - 429	2.4e-62	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	485 - 620	6.6e-29	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	626 - 791	2.6e-21	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13620
fragaria_vesca	FvH4_1g24460
malus_domestica	MD01G1005100.v1.1
prunus_persica	Prupe.4G271900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0121601
rosa_laevigata	RLG00000018626
rosa_roxburghii	Rroxscaffold_2G00122330
rosa_rugosa	Rorug02G0233800
rosa_samantha	Rh2BG301500 Rh2CG280300
rosa_wichuraiana	Rw2G023310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	921, 1697
AccB1I	GGYRCC	2 cut(s)	488, 2297
AccII	CGCG	5 cut(s)	1393, 1494, 1502, 1544, 2261
AclWI	GGATC	2 cut(s)	202, 770
AcsI	RAATTY	3 cut(s)	257, 549, 790
AcuI	CTGAAG	2 cut(s)	110, 801
AcvI	CACGTG	1 cut(s)	1035
AfaI	GTAC	8 cut(s)	25, 297, 372, 1090, 1185, 1242, 1626, 2418
AfiI	CCNNNNNNNGG	4 cut(s)	340, 585, 693, 2294
AflIII	ACRYGT	2 cut(s)	621, 1696
AgsI	TTSAA	9 cut(s)	302, 947, 1022, 1156, 1175, 1424, 1883, 2019, 2360
AhlI	ACTAGT	1 cut(s)	2155
AjnI	CCWGG	2 cut(s)	748, 1957
AloI	GAACNNNNNNTCC	2 cut(s)	1107, 1139
Alw21I	GWGCWC	2 cut(s)	564, 1485
Alw26I	GTCTC	8 cut(s)	739, 961, 1001, 1217, 1321, 1705, 2168, 2253
AlwI	GGATC	2 cut(s)	202, 770
AlwNI	CAGNNNCTG	1 cut(s)	2339
AoxI	GGCC	6 cut(s)	642, 961, 1024, 1248, 1489, 1767
ApeKI	GCWGC	6 cut(s)	440, 605, 1013, 1610, 2183, 2333
ApoI	RAATTY	3 cut(s)	257, 549, 790
AseI	ATTAAT	1 cut(s)	2100
Asp700I	GAANNNNTTC	1 cut(s)	868
AspLEI	GCGC	4 cut(s)	52, 249, 1496, 1546
AspS9I	GGNCC	6 cut(s)	230, 914, 1025, 1489, 1907, 2062
AsuC2I	CCSGG	2 cut(s)	536, 1766
AsuHPI	GGTGA	2 cut(s)	55, 1638
AvaII	GGWCC	4 cut(s)	230, 914, 1907, 2062
BaeGI	GKGCMC	1 cut(s)	2383
BanI	GGYRCC	2 cut(s)	488, 2297
BanII	GRGCYC	3 cut(s)	394, 564, 1485
BauI	CACGAG	3 cut(s)	192, 1826, 2022
BbrPI	CACGTG	1 cut(s)	1035
BbsI	GAAGAC	1 cut(s)	477
Bbv12I	GWGCWC	2 cut(s)	564, 1485
BbvI	GCAGC	6 cut(s)	427, 617, 1000, 1597, 2195, 2345
BccI	CCATC	6 cut(s)	241, 286, 349, 407, 1736, 2053
BceAI	ACGGC	1 cut(s)	710
BciT130I	CCWGG	2 cut(s)	750, 1959
BclI	TGATCA	1 cut(s)	60
BcnI	CCSGG	2 cut(s)	536, 1766
BcoDI	GTCTC	8 cut(s)	739, 961, 1001, 1217, 1321, 1705, 2168, 2253
BcuI	ACTAGT	1 cut(s)	2155
BfaI	CTAG	4 cut(s)	21, 242, 708, 2156
BfmI	CTRYAG	1 cut(s)	603
BfoI	RGCGCY	1 cut(s)	250
BglII	AGATCT	1 cut(s)	1445
BisI	GCNGC	7 cut(s)	441, 606, 1014, 1492, 1611, 2184, 2334
BlpI	GCTNAGC	2 cut(s)	558, 1681
BlsI	GCNGC	7 cut(s)	442, 607, 1015, 1493, 1612, 2185, 2335
Bme1390I	CCNGG	4 cut(s)	536, 750, 1766, 1959
Bme18I	GGWCC	4 cut(s)	230, 914, 1907, 2062
BmgT120I	GGNCC	6 cut(s)	230, 914, 1025, 1489, 1907, 2062
BmiI	GGNNCC	2 cut(s)	490, 2299
BmrFI	CCNGG	4 cut(s)	536, 750, 1766, 1959
BmsI	GCATC	5 cut(s)	19, 844, 1467, 1505, 1971
BoxI	GACNNNNGTC	1 cut(s)	1265
BpiI	GAAGAC	1 cut(s)	477
BplI	GAGNNNNNCTC	2 cut(s)	1933, 1965
BpmI	CTGGAG	1 cut(s)	1284
Bpu10I	CCTNAGC	2 cut(s)	646, 2289
Bpu1102I	GCTNAGC	2 cut(s)	558, 1681
BpuEI	CTTGAG	3 cut(s)	548, 983, 1542
BpuMI	CCSGG	2 cut(s)	536, 1766
Bsa29I	ATCGAT	1 cut(s)	596
BsaAI	YACGTR	3 cut(s)	374, 770, 1035
BsaI	GGTCTC	2 cut(s)	739, 1001
BsaJI	CCNNGG	5 cut(s)	211, 505, 1111, 1251, 2259
BsaWI	WCCGGW	1 cut(s)	839
BsaXI	ACNNNNNCTCC	2 cut(s)	2269, 2299
Bsc4I	CCNNNNNNNGG	4 cut(s)	340, 585, 693, 2294
Bse1I	ACTGG	4 cut(s)	1121, 1267, 1301, 2414
Bse3DI	GCAATG	3 cut(s)	720, 753, 2170
BseBI	CCWGG	2 cut(s)	750, 1959
BseCI	ATCGAT	1 cut(s)	596
BseDI	CCNNGG	5 cut(s)	211, 505, 1111, 1251, 2259
BseGI	GGATG	5 cut(s)	34, 1222, 1432, 1496, 1954
BseLI	CCNNNNNNNGG	4 cut(s)	340, 585, 693, 2294
BseMI	GCAATG	3 cut(s)	720, 753, 2170
BseMII	CTCAG	4 cut(s)	549, 654, 2280, 2397
BseNI	ACTGG	4 cut(s)	1121, 1267, 1301, 2414
BseRI	GAGGAG	2 cut(s)	2241, 2247
BseSI	GKGCMC	1 cut(s)	2383
BseXI	GCAGC	6 cut(s)	427, 617, 1000, 1597, 2195, 2345
BsgI	GTGCAG	1 cut(s)	732
Bsh1236I	CGCG	5 cut(s)	1393, 1494, 1502, 1544, 2261
Bsh1285I	CGRYCG	1 cut(s)	1818
BshFI	GGCC	6 cut(s)	644, 963, 1026, 1250, 1491, 1769
BshNI	GGYRCC	2 cut(s)	488, 2297
BshVI	ATCGAT	1 cut(s)	596
BsiEI	CGRYCG	1 cut(s)	1818
BsiHKAI	GWGCWC	2 cut(s)	564, 1485
BsiSI	CCGG	3 cut(s)	536, 840, 1766
BslI	CCNNNNNNNGG	4 cut(s)	340, 585, 693, 2294
BsmAI	GTCTC	8 cut(s)	739, 961, 1001, 1217, 1321, 1705, 2168, 2253
BsmBI	CGTCTC	3 cut(s)	961, 1321, 2253
BsmI	GAATGC	2 cut(s)	530, 1122
BsnI	GGCC	6 cut(s)	644, 963, 1026, 1250, 1491, 1769
Bso31I	GGTCTC	2 cut(s)	739, 1001
Bsp1286I	GDGCHC	4 cut(s)	394, 564, 1485, 2383
Bsp1407I	TGTACA	1 cut(s)	1624
Bsp143I	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
Bsp1720I	GCTNAGC	2 cut(s)	558, 1681
Bsp19I	CCATGG	1 cut(s)	1111
BspANI	GGCC	6 cut(s)	644, 963, 1026, 1250, 1491, 1769
BspCNI	CTCAG	4 cut(s)	550, 655, 2281, 2398
BspDI	ATCGAT	1 cut(s)	596
BspFNI	CGCG	5 cut(s)	1393, 1494, 1502, 1544, 2261
BspHI	TCATGA	2 cut(s)	1990, 2209
BspLI	GGNNCC	2 cut(s)	490, 2299
BspMAI	CTGCAG	1 cut(s)	607
BspPI	GGATC	2 cut(s)	202, 770
BspT107I	GGYRCC	2 cut(s)	488, 2297
BspTNI	GGTCTC	2 cut(s)	739, 1001
BsrDI	GCAATG	3 cut(s)	720, 753, 2170
BsrGI	TGTACA	1 cut(s)	1624
BsrI	ACTGG	4 cut(s)	1121, 1267, 1301, 2414
BssECI	CCNNGG	5 cut(s)	211, 505, 1111, 1251, 2259
BssMI	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
BssSI	CACGAG	3 cut(s)	192, 1826, 2022
BssT1I	CCWWGG	4 cut(s)	211, 505, 1111, 1251
Bst2BI	CACGAG	3 cut(s)	192, 1826, 2022
Bst2UI	CCWGG	2 cut(s)	750, 1959
Bst6I	CTCTTC	4 cut(s)	983, 1884, 2166, 2224
BstAPI	GCANNNNNTGC	1 cut(s)	2120
BstAUI	TGTACA	1 cut(s)	1624
BstBAI	YACGTR	3 cut(s)	374, 770, 1035
BstC8I	GCNNGC	3 cut(s)	390, 1361, 2316
BstDEI	CTNAG	7 cut(s)	478, 558, 646, 663, 1681, 2289, 2406
BstDSI	CCRYGG	2 cut(s)	1111, 2259
BstF5I	GGATG	5 cut(s)	34, 1222, 1432, 1496, 1954
BstFNI	CGCG	5 cut(s)	1393, 1494, 1502, 1544, 2261
BstH2I	RGCGCY	1 cut(s)	250
BstHHI	GCGC	4 cut(s)	52, 249, 1496, 1546
BstKTI	GATC	9 cut(s)	63, 210, 467, 705, 765, 837, 1448, 1573, 2195
BstMAI	GTCTC	8 cut(s)	739, 961, 1001, 1217, 1321, 1705, 2168, 2253
BstMBI	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
BstMCI	CGRYCG	1 cut(s)	1818
BstMWI	GCNNNNNNNGC	3 cut(s)	1619, 2012, 2120
BstNI	CCWGG	2 cut(s)	750, 1959
BstNSI	RCATGY	1 cut(s)	625
BstPAI	GACNNNNGTC	1 cut(s)	1265
BstSCI	CCNGG	4 cut(s)	534, 748, 1764, 1957
BstSFI	CTRYAG	1 cut(s)	603
BstSLI	GKGCMC	1 cut(s)	2383
BstSNI	TACGTA	2 cut(s)	374, 770
BstUI	CGCG	5 cut(s)	1393, 1494, 1502, 1544, 2261
BstV1I	GCAGC	6 cut(s)	427, 617, 1000, 1597, 2195, 2345
BstV2I	GAAGAC	1 cut(s)	477
BstX2I	RGATCY	2 cut(s)	207, 1445
BstYI	RGATCY	2 cut(s)	207, 1445
Bsu15I	ATCGAT	1 cut(s)	596
BsuRI	GGCC	6 cut(s)	644, 963, 1026, 1250, 1491, 1769
BsuTUI	ATCGAT	1 cut(s)	596
BtgI	CCRYGG	2 cut(s)	1111, 2259
BtgZI	GCGATG	2 cut(s)	385, 1517
BtsCI	GGATG	5 cut(s)	34, 1222, 1432, 1496, 1954
BtsI	GCAGTG	1 cut(s)	2193
BtsIMutI	CAGTG	5 cut(s)	802, 1308, 1869, 2044, 2193
Cac8I	GCNNGC	3 cut(s)	390, 1361, 2316
CaiI	CAGNNNCTG	1 cut(s)	2339
CciI	TCATGA	2 cut(s)	1990, 2209
CfoI	GCGC	4 cut(s)	52, 249, 1496, 1546
Cfr13I	GGNCC	6 cut(s)	230, 914, 1025, 1489, 1907, 2062
Cfr42I	CCGCGG	1 cut(s)	2262
ClaI	ATCGAT	1 cut(s)	596
Csp6I	GTAC	8 cut(s)	24, 296, 371, 1089, 1184, 1241, 1625, 2417
CspCI	CAANNNNNGTGG	2 cut(s)	241, 276
CviAII	CATG	9 cut(s)	58, 622, 1112, 1664, 1938, 1991, 2210, 2376, 2426
CviQI	GTAC	8 cut(s)	24, 296, 371, 1089, 1184, 1241, 1625, 2417
DdeI	CTNAG	7 cut(s)	478, 558, 646, 663, 1681, 2289, 2406
DpnI	GATC	9 cut(s)	62, 209, 466, 704, 764, 836, 1447, 1572, 2194
DpnII	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
DrdI	GACNNNNNNGTC	2 cut(s)	921, 1697
DseDI	GACNNNNNNGTC	2 cut(s)	921, 1697
Eam1104I	CTCTTC	4 cut(s)	983, 1884, 2166, 2224
EarI	CTCTTC	4 cut(s)	983, 1884, 2166, 2224
EciI	GGCGGA	2 cut(s)	231, 604
Ecl136II	GAGCTC	2 cut(s)	562, 1483
Eco105I	TACGTA	2 cut(s)	374, 770
Eco130I	CCWWGG	4 cut(s)	211, 505, 1111, 1251
Eco24I	GRGCYC	3 cut(s)	394, 564, 1485
Eco31I	GGTCTC	2 cut(s)	739, 1001
Eco32I	GATATC	1 cut(s)	594
Eco47I	GGWCC	4 cut(s)	230, 914, 1907, 2062
Eco53kI	GAGCTC	2 cut(s)	562, 1483
Eco57I	CTGAAG	2 cut(s)	110, 801
Eco72I	CACGTG	1 cut(s)	1035
EcoICRI	GAGCTC	2 cut(s)	562, 1483
EcoO109I	RGGNCCY	1 cut(s)	1025
EcoRI	GAATTC	1 cut(s)	549
EcoRII	CCWGG	2 cut(s)	748, 1957
EcoRV	GATATC	1 cut(s)	594
EcoT14I	CCWWGG	4 cut(s)	211, 505, 1111, 1251
EcoT22I	ATGCAT	4 cut(s)	462, 1460, 1665, 1939
EcoT38I	GRGCYC	3 cut(s)	394, 564, 1485
ErhI	CCWWGG	4 cut(s)	211, 505, 1111, 1251
Esp3I	CGTCTC	3 cut(s)	961, 1321, 2253
FaeI	CATG	9 cut(s)	61, 625, 1115, 1667, 1941, 1994, 2213, 2379, 2429
FatI	CATG	9 cut(s)	57, 621, 1111, 1663, 1937, 1990, 2209, 2375, 2425
FauI	CCCGC	2 cut(s)	1549, 2254
FauNDI	CATATG	2 cut(s)	809, 2443
FbaI	TGATCA	1 cut(s)	60
Fnu4HI	GCNGC	7 cut(s)	441, 606, 1014, 1492, 1611, 2184, 2334
FokI	GGATG	5 cut(s)	41, 1229, 1419, 1483, 1941
FriOI	GRGCYC	3 cut(s)	394, 564, 1485
Fsp4HI	GCNGC	7 cut(s)	441, 606, 1014, 1492, 1611, 2184, 2334
FspBI	CTAG	4 cut(s)	21, 242, 708, 2156
GlaI	GCGC	4 cut(s)	51, 248, 1495, 1545
GluI	GCNGC	7 cut(s)	441, 606, 1014, 1492, 1611, 2184, 2334
GsuI	CTGGAG	1 cut(s)	1284
HaeII	RGCGCY	1 cut(s)	250
HaeIII	GGCC	6 cut(s)	644, 963, 1026, 1250, 1491, 1769
HapII	CCGG	3 cut(s)	536, 840, 1766
HhaI	GCGC	4 cut(s)	52, 249, 1496, 1546
Hin1II	CATG	9 cut(s)	61, 625, 1115, 1667, 1941, 1994, 2213, 2379, 2429
Hin6I	GCGC	4 cut(s)	50, 247, 1494, 1544
HinP1I	GCGC	4 cut(s)	50, 247, 1494, 1544
HincII	GTYRAC	3 cut(s)	616, 1041, 1783
HindII	GTYRAC	3 cut(s)	616, 1041, 1783
HindIII	AAGCTT	3 cut(s)	941, 1425, 1923
HpaI	GTTAAC	2 cut(s)	616, 1041
HpaII	CCGG	3 cut(s)	536, 840, 1766
HphI	GGTGA	2 cut(s)	55, 1638
Hpy166II	GTNNAC	6 cut(s)	323, 616, 1041, 1384, 1516, 1783
Hpy188I	TCNGA	6 cut(s)	205, 469, 863, 1570, 1820, 2326
Hpy8I	GTNNAC	6 cut(s)	323, 616, 1041, 1384, 1516, 1783
HpyAV	CCTTC	7 cut(s)	454, 776, 974, 1124, 1427, 1714, 2231
HpyCH4IV	ACGT	6 cut(s)	373, 769, 1034, 1464, 1696, 2461
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1619, 2012, 2120
HpyF3I	CTNAG	7 cut(s)	478, 558, 646, 663, 1681, 2289, 2406
HpySE526I	ACGT	6 cut(s)	373, 769, 1034, 1464, 1696, 2461
Hsp92II	CATG	9 cut(s)	61, 625, 1115, 1667, 1941, 1994, 2213, 2379, 2429
HspAI	GCGC	4 cut(s)	50, 247, 1494, 1544
Ksp22I	TGATCA	1 cut(s)	60
KspAI	GTTAAC	2 cut(s)	616, 1041
KspI	CCGCGG	1 cut(s)	2262
Kzo9I	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
LmnI	GCTCC	2 cut(s)	254, 1847
Lsp1109I	GCAGC	6 cut(s)	427, 617, 1000, 1597, 2195, 2345
LweI	GCATC	5 cut(s)	19, 844, 1467, 1505, 1971
MaeI	CTAG	4 cut(s)	21, 242, 708, 2156
MaeII	ACGT	6 cut(s)	373, 769, 1034, 1464, 1696, 2461
MaeIII	GTNAC	6 cut(s)	148, 523, 668, 1282, 2039, 2437
MalI	GATC	9 cut(s)	62, 209, 466, 704, 764, 836, 1447, 1572, 2194
MboI	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
MfeI	CAATTG	1 cut(s)	2136
MflI	RGATCY	2 cut(s)	207, 1445
MhlI	GDGCHC	4 cut(s)	394, 564, 1485, 2383
MluCI	AATT	6 cut(s)	219, 257, 549, 790, 1410, 2136
MlyI	GAGTC	5 cut(s)	1275, 1833, 1851, 2141, 2419
MmeI	TCCRAC	4 cut(s)	1174, 1363, 1798, 2206
Mph1103I	ATGCAT	4 cut(s)	462, 1460, 1665, 1939
MroXI	GAANNNNTTC	1 cut(s)	868
MseI	TTAA	8 cut(s)	615, 1040, 1188, 1413, 1548, 1634, 2100, 2267
MslI	CAYNNNNRTG	2 cut(s)	1668, 2424
MspA1I	CMGCKG	1 cut(s)	2261
MspI	CCGG	3 cut(s)	536, 840, 1766
MspR9I	CCNGG	4 cut(s)	536, 750, 1766, 1959
MunI	CAATTG	1 cut(s)	2136
Mva1269I	GAATGC	2 cut(s)	530, 1122
MvaI	CCWGG	2 cut(s)	750, 1959
MvnI	CGCG	5 cut(s)	1393, 1494, 1502, 1544, 2261
MwoI	GCNNNNNNNGC	3 cut(s)	1619, 2012, 2120
NciI	CCSGG	2 cut(s)	536, 1766
NcoI	CCATGG	1 cut(s)	1111
NdeI	CATATG	2 cut(s)	809, 2443
NdeII	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
NlaIII	CATG	9 cut(s)	61, 625, 1115, 1667, 1941, 1994, 2213, 2379, 2429
NlaIV	GGNNCC	2 cut(s)	490, 2299
NmuCI	GTSAC	4 cut(s)	148, 668, 2039, 2437
NsiI	ATGCAT	4 cut(s)	462, 1460, 1665, 1939
NspI	RCATGY	1 cut(s)	625
PagI	TCATGA	2 cut(s)	1990, 2209
PciI	ACATGT	1 cut(s)	621
PcsI	WCGNNNNNNNCGW	2 cut(s)	190, 1824
PctI	GAATGC	2 cut(s)	530, 1122
PdmI	GAANNNNTTC	1 cut(s)	868
PfeI	GAWTC	5 cut(s)	634, 904, 1134, 1754, 2455
PkrI	GCNGC	7 cut(s)	442, 607, 1015, 1493, 1612, 2185, 2335
PleI	GAGTC	5 cut(s)	1274, 1833, 1851, 2140, 2418
PmaCI	CACGTG	1 cut(s)	1035
PmlI	CACGTG	1 cut(s)	1035
PpsI	GAGTC	5 cut(s)	1274, 1833, 1851, 2140, 2418
Ppu21I	YACGTR	3 cut(s)	374, 770, 1035
PscI	ACATGT	1 cut(s)	621
PshAI	GACNNNNGTC	1 cut(s)	1265
PshBI	ATTAAT	1 cut(s)	2100
Psp124BI	GAGCTC	2 cut(s)	564, 1485
Psp6I	CCWGG	2 cut(s)	748, 1957
PspCI	CACGTG	1 cut(s)	1035
PspGI	CCWGG	2 cut(s)	748, 1957
PspN4I	GGNNCC	2 cut(s)	490, 2299
PspPI	GGNCC	6 cut(s)	230, 914, 1025, 1489, 1907, 2062
PstI	CTGCAG	1 cut(s)	607
PstNI	CAGNNNCTG	1 cut(s)	2339
PsuI	RGATCY	2 cut(s)	207, 1445
RsaI	GTAC	8 cut(s)	25, 297, 372, 1090, 1185, 1242, 1626, 2418
RsaNI	GTAC	8 cut(s)	24, 296, 371, 1089, 1184, 1241, 1625, 2417
RseI	CAYNNNNRTG	2 cut(s)	1668, 2424
SacI	GAGCTC	2 cut(s)	564, 1485
SacII	CCGCGG	1 cut(s)	2262
SaqAI	TTAA	8 cut(s)	615, 1040, 1188, 1413, 1548, 1634, 2100, 2267
SatI	GCNGC	7 cut(s)	441, 606, 1014, 1492, 1611, 2184, 2334
Sau3AI	GATC	9 cut(s)	60, 207, 464, 702, 762, 834, 1445, 1570, 2192
Sau96I	GGNCC	6 cut(s)	230, 914, 1025, 1489, 1907, 2062
SchI	GAGTC	5 cut(s)	1275, 1833, 1851, 2141, 2419
ScrFI	CCNGG	4 cut(s)	536, 750, 1766, 1959
SduI	GDGCHC	4 cut(s)	394, 564, 1485, 2383
SfaNI	GCATC	5 cut(s)	19, 844, 1467, 1505, 1971
SfcI	CTRYAG	1 cut(s)	603
Sfr303I	CCGCGG	1 cut(s)	2262
SgrBI	CCGCGG	1 cut(s)	2262
SinI	GGWCC	4 cut(s)	230, 914, 1907, 2062
SmiMI	CAYNNNNRTG	2 cut(s)	1668, 2424
SmlI	CTYRAG	3 cut(s)	563, 998, 1557
SmoI	CTYRAG	3 cut(s)	563, 998, 1557
SnaBI	TACGTA	2 cut(s)	374, 770
SpeI	ACTAGT	1 cut(s)	2155
Sse9I	AATT	6 cut(s)	219, 257, 549, 790, 1410, 2136
SspMI	CTAG	4 cut(s)	21, 242, 708, 2156
SstI	GAGCTC	2 cut(s)	564, 1485
StyD4I	CCNGG	4 cut(s)	534, 748, 1764, 1957
StyI	CCWWGG	4 cut(s)	211, 505, 1111, 1251
TaiI	ACGT	6 cut(s)	376, 772, 1037, 1467, 1699, 2464
TaqI	TCGA	3 cut(s)	99, 596, 1797
TaqII	GACCGA	1 cut(s)	1804
TasI	AATT	6 cut(s)	219, 257, 549, 790, 1410, 2136
TatI	WGTACW	3 cut(s)	1183, 1624, 2416
TauI	GCSGC	1 cut(s)	1494
TfiI	GAWTC	5 cut(s)	634, 904, 1134, 1754, 2455
Tru1I	TTAA	8 cut(s)	615, 1040, 1188, 1413, 1548, 1634, 2100, 2267
Tru9I	TTAA	8 cut(s)	615, 1040, 1188, 1413, 1548, 1634, 2100, 2267
TscAI	CASTG	5 cut(s)	802, 1308, 1876, 2044, 2193
TseFI	GTSAC	4 cut(s)	148, 668, 2039, 2437
TseI	GCWGC	6 cut(s)	440, 605, 1013, 1610, 2183, 2333
Tsp45I	GTSAC	4 cut(s)	148, 668, 2039, 2437
TspGWI	ACGGA	2 cut(s)	41, 511
TspRI	CASTG	5 cut(s)	802, 1308, 1876, 2044, 2193
VpaK11BI	GGWCC	4 cut(s)	230, 914, 1907, 2062
VspI	ATTAAT	1 cut(s)	2100
XapI	RAATTY	3 cut(s)	257, 549, 790
XceI	RCATGY	1 cut(s)	625
XcmI	CCANNNNNNNNNTGG	1 cut(s)	756
XmnI	GAANNNNTTC	1 cut(s)	868
XspI	CTAG	4 cut(s)	21, 242, 708, 2156
Zsp2I	ATGCAT	4 cut(s)	462, 1460, 1665, 1939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.