AT2G17970
ERF Family

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
7818818 .. 7821387
2570 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17970.8

Sequence Viewer

Length: 1524 bp
ATGGAAAACGATCCATTTCTCCGGCAGTACCAGCCGTCGGAGCTTAAGATCGCTTCGGAGTTTCTGACGAATTGGCTTCCTTTTTTATCTAAAGATCTATGCAAGGATTGTAATCACCTTCTCTCCAATCGAATCCGTTCTCTTGACCCAGCACATTGTAGTAACAACACTGACAAAGTTGATGGAGAGTGTAAAACTGGTTCTTGTTCAGTGGTGGAAAATATGGGATCAGAAAGAGCTAGTAACAATGTGGATGATAATTATGATGAGAAGTCGGAAAATGGCGAAGACTGTGATAATCATTCGTTAGGTAGTTGGAAGGGAAGTGAAATTGTATTTGGTTCCTTTCCTGAAGATTTTAGTAGTGTATTGCAATCTAGACCAGCTGTTGTTGAAACAGCAAGCCCTCGTATGCGTTGGGCTGATATGGCACAAGAGGATGAGTTCGATGAGGAGGAGGAGGAGGAGGAAGAGGAGAGGGATTCGAGTAGGAAAGGTTTTGATGCGAGTTCGATGAAGACTCCAGAGAAGCCTAAGTTGTCTAGAGATCAGAGAGAGAATCTCAGGCTGATTAATGTGAAGAGAAAGAAAGACTTTATTTGCTTGGAGAGAGTTAAGGGAAAGATTGTTAACGTGCTTGATGGACTTGAGTTGCACACTGGTGTTTTTAGCGCAGTGGAGCAGAAACGGATTGTTGATCAAGTGTATCAACTTCAAGAGAAGGGACGAAGAGGAGAACTTAAAAAGCGTACATTTACTGCTCCACATAAGTGGATGAGAGGAAAAGGACGTGAGACTATACAATTTGGCTGTTGCTACAACTACGCTCCAGACAGAGCTGGAAACCCACCGGGTATCCTTCAACGTGAAGAAGTGGATCCACTACCTCATCTTTTCAAAGTAATCATTAGAAAGTTGATTAAATGGCATGTACTGCCTCCAACTTGTGTGCCCGATAGCTGCATTGTGAACATCTATGATGAAGGTGACTGCATACCTCCTCACATCGACAACCACGACTTTCTCCGTCCCTTCTGTACCATCTCTTTCCTCAGTGAATGCGATATCCTCTTTGGCTCAAACCTGAAAGTTGAGGGTCCTGGTGACTTCTCGGGTTCATACTCAATACCGCTTCCTGTGGGATCAGTTCTGGTGTTAAATGGAAATGGAGCTGATGTAGCTAAGCACTGTGTACCTGCAGTTCCTACAAAAAGGATATCAATTACATTTAGGAAAATGGATGAGTCGAAACGCCCGGTTTGGTTCACCCCAGAGCCTGATTTGCAAGGGATTGAGCCATTGCCATTGGACCTGAACCGGTCTGGTTCTACTTCAAGGTTCTCAAGATTAAACAACCATAACGGTACTAACCAAAGAGGACATGGACGTAGAGGAGGAGGCAATGGTTATGACTCAAGAGGTTACTATAATCCTGAGAGAAGCAGTGAACACAATGACTCTGGAGACTGGCCATCAAGCCAGAGAAGAGGAATGCCACGTCCTAGTAGAAGAAACTACGGTTAA

Protein Analysis

507

Amino Acids

57.43

Weight (kDa)

5.98

Isoelectric Point (pI)

59.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy_2 PF13532 282 - 401 4.8e-10 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1204
AciI CCGC 1 cut(s) 1130
AclWI GGATC 5 cut(s) 5, 235, 872, 885, 1150
AcoI YGGCCR 1 cut(s) 1469
AcuI CTGAAG 1 cut(s) 372
AfaI GTAC 6 cut(s) 29, 751, 933, 1039, 1194, 1366
AfiI CCNNNNNNNGG 1 cut(s) 37
AflII CTTAAG 1 cut(s) 44
AgeI ACCGGT 1 cut(s) 1317
AgsI TTSAA 5 cut(s) 395, 716, 863, 898, 1335
AjiI CACGTC 2 cut(s) 791, 1499
AjnI CCWGG 1 cut(s) 1099
AjuI GAANNNNNNNTTGG 2 cut(s) 321, 353
AleI CACNNNNGTG 2 cut(s) 660, 769
AluBI AGCT 7 cut(s) 43, 239, 386, 839, 960, 1172, 1181
AluI AGCT 7 cut(s) 43, 239, 386, 839, 960, 1172, 1181
Alw26I GTCTC 2 cut(s) 788, 1458
AlwI GGATC 5 cut(s) 5, 235, 872, 885, 1150
AlwNI CAGNNNCTG 1 cut(s) 1277
Ama87I CYCGRG 1 cut(s) 1111
AoxI GGCC 1 cut(s) 1469
ApeKI GCWGC 1 cut(s) 960
AseI ATTAAT 1 cut(s) 573
AsiGI ACCGGT 1 cut(s) 1317
Asp700I GAANNNNTTC 1 cut(s) 136
AspLEI GCGC 1 cut(s) 674
AspS9I GGNCC 2 cut(s) 1097, 1309
AsuC2I CCSGG 2 cut(s) 852, 1256
AsuHPI GGTGA 4 cut(s) 107, 998, 1115, 1258
AvaI CYCGRG 1 cut(s) 1111
AvaII GGWCC 2 cut(s) 1097, 1309
BaeGI GKGCMC 1 cut(s) 954
BalI TGGCCA 1 cut(s) 1471
BamHI GGATCC 1 cut(s) 877
BbsI GAAGAC 2 cut(s) 294, 524
BbvI GCAGC 1 cut(s) 947
BccI CCATC 4 cut(s) 176, 635, 1049, 1480
BceAI ACGGC 1 cut(s) 19
BciT130I CCWGG 1 cut(s) 1101
BciVI GTATCC 1 cut(s) 866
BclI TGATCA 1 cut(s) 697
BcnI CCSGG 2 cut(s) 852, 1256
BcoDI GTCTC 2 cut(s) 788, 1458
BfaI CTAG 4 cut(s) 240, 378, 543, 1503
BfmI CTRYAG 1 cut(s) 1197
BfrI CTTAAG 1 cut(s) 44
BfuAI ACCTGC 1 cut(s) 1204
BfuI GTATCC 1 cut(s) 866
BglII AGATCT 1 cut(s) 94
BisI GCNGC 1 cut(s) 961
BlpI GCTNAGC 1 cut(s) 1182
BlsI GCNGC 1 cut(s) 962
Bme1390I CCNGG 3 cut(s) 852, 1101, 1256
Bme18I GGWCC 2 cut(s) 1097, 1309
BmeT110I CYCGRG 1 cut(s) 1111
BmgBI CACGTC 2 cut(s) 791, 1499
BmgT120I GGNCC 2 cut(s) 1097, 1309
BmiI GGNNCC 3 cut(s) 343, 879, 1098
BmrFI CCNGG 3 cut(s) 852, 1101, 1256
BmsI GCATC 1 cut(s) 493
BpiI GAAGAC 2 cut(s) 294, 524
BplI GAGNNNNNCTC 2 cut(s) 546, 578
BpmI CTGGAG 3 cut(s) 507, 813, 1482
Bpu1102I GCTNAGC 1 cut(s) 1182
BpuEI CTTGAG 3 cut(s) 668, 1327, 1399
BpuMI CCSGG 2 cut(s) 852, 1256
BsaBI GATNNNNATC 1 cut(s) 111
BsaWI WCCGGW 1 cut(s) 1317
BsaXI ACNNNNNCTCC 4 cut(s) 107, 137, 1161, 1191
Bsc4I CCNNNNNNNGG 1 cut(s) 37
Bse118I RCCGGY 1 cut(s) 1317
Bse1I ACTGG 3 cut(s) 202, 664, 1472
Bse3DI GCAATG 2 cut(s) 1298, 1408
Bse8I GATNNNNATC 1 cut(s) 111
BseBI CCWGG 1 cut(s) 1101
BseGI GGATG 4 cut(s) 259, 445, 780, 1246
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 1 cut(s) 37
BseMI GCAATG 2 cut(s) 1298, 1408
BseMII CTCAG 3 cut(s) 577, 1066, 1425
BseNI ACTGG 3 cut(s) 202, 664, 1472
BseSI GKGCMC 1 cut(s) 954
BseXI GCAGC 1 cut(s) 947
BseYI CCCAGC 1 cut(s) 148
BshFI GGCC 1 cut(s) 1471
BshTI ACCGGT 1 cut(s) 1317
BsiHKCI CYCGRG 1 cut(s) 1111
BsiSI CCGG 4 cut(s) 22, 851, 1256, 1318
BslFI GGGAC 2 cut(s) 738, 1014
BslI CCNNNNNNNGG 1 cut(s) 37
BsmAI GTCTC 2 cut(s) 788, 1458
BsmFI GGGAC 2 cut(s) 738, 1014
BsmI GAATGC 2 cut(s) 1064, 1497
BsnI GGCC 1 cut(s) 1471
BsoBI CYCGRG 1 cut(s) 1111
Bsp1286I GDGCHC 1 cut(s) 954
Bsp143I GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
Bsp1720I GCTNAGC 1 cut(s) 1182
BspACI CCGC 1 cut(s) 1130
BspANI GGCC 1 cut(s) 1471
BspCNI CTCAG 3 cut(s) 576, 1065, 1426
BspLI GGNNCC 3 cut(s) 343, 879, 1098
BspMAI CTGCAG 1 cut(s) 1201
BspMI ACCTGC 1 cut(s) 1204
BspPI GGATC 5 cut(s) 5, 235, 872, 885, 1150
BspTI CTTAAG 1 cut(s) 44
BsrDI GCAATG 2 cut(s) 1298, 1408
BsrFI RCCGGY 1 cut(s) 1317
BsrI ACTGG 3 cut(s) 202, 664, 1472
BssAI RCCGGY 1 cut(s) 1317
BssMI GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
Bst2UI CCWGG 1 cut(s) 1101
Bst4CI ACNGT 4 cut(s) 293, 1190, 1364, 1520
Bst6I CTCTTC 4 cut(s) 465, 575, 724, 1480
BstAFI CTTAAG 1 cut(s) 44
BstAPI GCANNNNNTGC 1 cut(s) 934
BstC8I GCNNGC 1 cut(s) 403
BstDEI CTNAG 5 cut(s) 534, 563, 1052, 1182, 1434
BstF5I GGATG 4 cut(s) 259, 445, 780, 1246
BstHHI GCGC 1 cut(s) 674
BstKTI GATC 8 cut(s) 13, 51, 97, 230, 550, 700, 880, 1145
BstMAI GTCTC 2 cut(s) 788, 1458
BstMBI GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
BstMWI GCNNNNNNNGC 6 cut(s) 31, 40, 428, 934, 1178, 1282
BstNI CCWGG 1 cut(s) 1101
BstNSI RCATGY 1 cut(s) 932
BstSCI CCNGG 3 cut(s) 850, 1099, 1254
BstSFI CTRYAG 1 cut(s) 1197
BstSLI GKGCMC 1 cut(s) 954
BstV1I GCAGC 1 cut(s) 947
BstV2I GAAGAC 2 cut(s) 294, 524
BstX2I RGATCY 2 cut(s) 94, 877
BstXI CCANNNNNNTGG 1 cut(s) 771
BstYI RGATCY 2 cut(s) 94, 877
BsuI GTATCC 1 cut(s) 866
BsuRI GGCC 1 cut(s) 1471
BtrI CACGTC 2 cut(s) 791, 1499
BtsCI GGATG 4 cut(s) 259, 445, 780, 1246
BtsI GCAGTG 2 cut(s) 681, 1450
BtsIMutI CAGTG 7 cut(s) 168, 216, 657, 681, 1060, 1186, 1450
BveI ACCTGC 1 cut(s) 1204
Cac8I GCNNGC 1 cut(s) 403
CaiI CAGNNNCTG 1 cut(s) 1277
CfoI GCGC 1 cut(s) 674
Cfr10I RCCGGY 1 cut(s) 1317
Cfr13I GGNCC 2 cut(s) 1097, 1309
Csp6I GTAC 6 cut(s) 28, 750, 932, 1038, 1193, 1365
CspAI ACCGGT 1 cut(s) 1317
CviAII CATG 2 cut(s) 929, 1382
CviQI GTAC 6 cut(s) 28, 750, 932, 1038, 1193, 1365
DdeI CTNAG 5 cut(s) 534, 563, 1052, 1182, 1434
DpnI GATC 8 cut(s) 12, 50, 96, 229, 549, 699, 879, 1144
DpnII GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
EaeI YGGCCR 1 cut(s) 1469
Eam1104I CTCTTC 4 cut(s) 465, 575, 724, 1480
EarI CTCTTC 4 cut(s) 465, 575, 724, 1480
Eco32I GATATC 2 cut(s) 1066, 1218
Eco47I GGWCC 2 cut(s) 1097, 1309
Eco57I CTGAAG 1 cut(s) 372
Eco88I CYCGRG 1 cut(s) 1111
EcoO109I RGGNCCY 1 cut(s) 1097
EcoRII CCWGG 1 cut(s) 1099
EcoRV GATATC 2 cut(s) 1066, 1218
FaeI CATG 2 cut(s) 932, 1385
FalI AAGNNNNNCTT 2 cut(s) 578, 610
FaqI GGGAC 2 cut(s) 738, 1014
FatI CATG 2 cut(s) 928, 1381
FbaI TGATCA 1 cut(s) 697
Fnu4HI GCNGC 1 cut(s) 961
FokI GGATG 4 cut(s) 266, 452, 787, 1253
Fsp4HI GCNGC 1 cut(s) 961
FspBI CTAG 4 cut(s) 240, 378, 543, 1503
GlaI GCGC 1 cut(s) 673
GluI GCNGC 1 cut(s) 961
GsaI CCCAGC 1 cut(s) 152
GsuI CTGGAG 3 cut(s) 507, 813, 1482
HaeIII GGCC 1 cut(s) 1471
HapII CCGG 4 cut(s) 22, 851, 1256, 1318
HhaI GCGC 1 cut(s) 674
Hin1II CATG 2 cut(s) 932, 1385
Hin6I GCGC 1 cut(s) 672
HinP1I GCGC 1 cut(s) 672
HincII GTYRAC 1 cut(s) 631
HindII GTYRAC 1 cut(s) 631
HinfI GANTC 7 cut(s) 132, 482, 520, 559, 1244, 1412, 1457
HpaI GTTAAC 1 cut(s) 631
HpaII CCGG 4 cut(s) 22, 851, 1256, 1318
HphI GGTGA 4 cut(s) 107, 998, 1115, 1258
Hpy166II GTNNAC 5 cut(s) 631, 970, 1193, 1266, 1448
Hpy188I TCNGA 6 cut(s) 40, 58, 66, 232, 277, 552
Hpy8I GTNNAC 5 cut(s) 631, 970, 1193, 1266, 1448
Hpy99I CGWCG 1 cut(s) 40
HpyAV CCTTC 6 cut(s) 128, 313, 715, 869, 977, 1042
HpyCH4III ACNGT 4 cut(s) 293, 1190, 1364, 1520
HpyCH4IV ACGT 5 cut(s) 633, 790, 865, 1387, 1498
HpyCH4V TGCA 7 cut(s) 102, 373, 655, 963, 993, 1199, 1285
HpyF10VI GCNNNNNNNGC 6 cut(s) 31, 40, 428, 934, 1178, 1282
HpyF3I CTNAG 5 cut(s) 534, 563, 1052, 1182, 1434
HpySE526I ACGT 5 cut(s) 633, 790, 865, 1387, 1498
Hsp92II CATG 2 cut(s) 932, 1385
HspAI GCGC 1 cut(s) 672
Ksp22I TGATCA 1 cut(s) 697
KspAI GTTAAC 1 cut(s) 631
Kzo9I GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
LmnI GCTCC 5 cut(s) 40, 679, 766, 832, 1169
Lsp1109I GCAGC 1 cut(s) 947
LweI GCATC 1 cut(s) 493
MaeI CTAG 4 cut(s) 240, 378, 543, 1503
MaeII ACGT 5 cut(s) 633, 790, 865, 1387, 1498
MaeIII GTNAC 5 cut(s) 161, 242, 986, 1103, 1421
MalI GATC 8 cut(s) 12, 50, 96, 229, 549, 699, 879, 1144
MboI GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
MboII GAAGA 9 cut(s) 299, 365, 482, 529, 592, 741, 881, 1497, 1521
MflI RGATCY 2 cut(s) 94, 877
MhlI GDGCHC 1 cut(s) 954
MlsI TGGCCA 1 cut(s) 1471
MluCI AATT 5 cut(s) 70, 259, 330, 803, 1221
MluNI TGGCCA 1 cut(s) 1471
MlyI GAGTC 4 cut(s) 514, 1253, 1406, 1451
MmeI TCCRAC 4 cut(s) 18, 255, 296, 965
Mox20I TGGCCA 1 cut(s) 1471
MroXI GAANNNNTTC 1 cut(s) 136
MscI TGGCCA 1 cut(s) 1471
MseI TTAA 9 cut(s) 45, 573, 615, 630, 741, 921, 1157, 1349, 1522
MslI CAYNNNNRTG 2 cut(s) 660, 769
Msp20I TGGCCA 1 cut(s) 1471
MspA1I CMGCKG 1 cut(s) 386
MspCI CTTAAG 1 cut(s) 44
MspI CCGG 4 cut(s) 22, 851, 1256, 1318
MspR9I CCNGG 3 cut(s) 852, 1101, 1256
Mva1269I GAATGC 2 cut(s) 1064, 1497
MvaI CCWGG 1 cut(s) 1101
MwoI GCNNNNNNNGC 6 cut(s) 31, 40, 428, 934, 1178, 1282
NciI CCSGG 2 cut(s) 852, 1256
NdeII GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
NlaIII CATG 2 cut(s) 932, 1385
NlaIV GGNNCC 3 cut(s) 343, 879, 1098
NmuCI GTSAC 2 cut(s) 986, 1103
NspI RCATGY 1 cut(s) 932
OliI CACNNNNGTG 2 cut(s) 660, 769
PcsI WCGNNNNNNNCGW 1 cut(s) 1014
PctI GAATGC 2 cut(s) 1064, 1497
PdmI GAANNNNTTC 1 cut(s) 136
PfeI GAWTC 3 cut(s) 132, 482, 559
PinAI ACCGGT 1 cut(s) 1317
PkrI GCNGC 1 cut(s) 962
PleI GAGTC 4 cut(s) 514, 1252, 1406, 1451
PpsI GAGTC 4 cut(s) 514, 1252, 1406, 1451
PpuMI RGGWCCY 1 cut(s) 1097
PshBI ATTAAT 1 cut(s) 573
Psp5II RGGWCCY 1 cut(s) 1097
Psp6I CCWGG 1 cut(s) 1099
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 1 cut(s) 1099
PspN4I GGNNCC 3 cut(s) 343, 879, 1098
PspPI GGNCC 2 cut(s) 1097, 1309
PspPPI RGGWCCY 1 cut(s) 1097
PsrI GAACNNNNNNTAC 4 cut(s) 184, 216, 1185, 1217
PstI CTGCAG 1 cut(s) 1201
PstNI CAGNNNCTG 1 cut(s) 1277
PsuI RGATCY 2 cut(s) 94, 877
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 6 cut(s) 29, 751, 933, 1039, 1194, 1366
RsaNI GTAC 6 cut(s) 28, 750, 932, 1038, 1193, 1365
RseI CAYNNNNRTG 2 cut(s) 660, 769
SaqAI TTAA 9 cut(s) 45, 573, 615, 630, 741, 921, 1157, 1349, 1522
SatI GCNGC 1 cut(s) 961
Sau3AI GATC 8 cut(s) 10, 48, 94, 227, 547, 697, 877, 1142
Sau96I GGNCC 2 cut(s) 1097, 1309
SchI GAGTC 4 cut(s) 514, 1253, 1406, 1451
ScrFI CCNGG 3 cut(s) 852, 1101, 1256
SduI GDGCHC 1 cut(s) 954
SfaNI GCATC 1 cut(s) 493
SfcI CTRYAG 1 cut(s) 1197
SinI GGWCC 2 cut(s) 1097, 1309
SmiMI CAYNNNNRTG 2 cut(s) 660, 769
SmlI CTYRAG 4 cut(s) 44, 647, 1342, 1414
SmoI CTYRAG 4 cut(s) 44, 647, 1342, 1414
Sse9I AATT 5 cut(s) 70, 259, 330, 803, 1221
SsiI CCGC 1 cut(s) 1130
SspMI CTAG 4 cut(s) 240, 378, 543, 1503
StyD4I CCNGG 3 cut(s) 850, 1099, 1254
TaaI ACNGT 4 cut(s) 293, 1190, 1364, 1520
TaiI ACGT 5 cut(s) 636, 793, 868, 1390, 1501
TaqI TCGA 6 cut(s) 130, 447, 485, 512, 1008, 1247
TasI AATT 5 cut(s) 70, 259, 330, 803, 1221
TatI WGTACW 1 cut(s) 931
TfiI GAWTC 3 cut(s) 132, 482, 559
Tru1I TTAA 9 cut(s) 45, 573, 615, 630, 741, 921, 1157, 1349, 1522
Tru9I TTAA 9 cut(s) 45, 573, 615, 630, 741, 921, 1157, 1349, 1522
TscAI CASTG 7 cut(s) 175, 216, 664, 681, 1060, 1193, 1450
TseFI GTSAC 2 cut(s) 986, 1103
TseI GCWGC 1 cut(s) 960
Tsp45I GTSAC 2 cut(s) 986, 1103
TspDTI ATGAA 3 cut(s) 530, 996, 1107
TspGWI ACGGA 3 cut(s) 125, 703, 1016
TspRI CASTG 7 cut(s) 175, 216, 664, 681, 1060, 1193, 1450
Vha464I CTTAAG 1 cut(s) 44
VpaK11BI GGWCC 2 cut(s) 1097, 1309
VspI ATTAAT 1 cut(s) 573
XbaI TCTAGA 2 cut(s) 377, 542
XceI RCATGY 1 cut(s) 932
XcmI CCANNNNNNNNNTGG 1 cut(s) 1379
XmnI GAANNNNTTC 1 cut(s) 136
XspI CTAG 4 cut(s) 240, 378, 543, 1503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.